Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000841.01.T01 | XP_003588454.1 | 87.819 | 353 | 42 | 1 | 1 | 352 | 1 | 353 | 0 | 635 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000841.01.T01 | Q9SU30 | 24.848 | 330 | 206 | 8 | 22 | 339 | 4 | 303 | 2.56E-13 | 75.1 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000841.01.T01 | G7I287 | 87.819 | 353 | 42 | 1 | 1 | 352 | 1 | 353 | 0.0 | 635 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000841.01.T01 | MTR_1g007410 | 87.819 | 353 | 42 | 1 | 1 | 352 | 1 | 353 | 0.0 | 635 |
MsG0180000841.01.T01 | MTR_0129s0070 | 47.739 | 398 | 181 | 15 | 7 | 390 | 2 | 386 | 7.12e-94 | 291 |
MsG0180000841.01.T01 | MTR_8g063440 | 45.385 | 390 | 189 | 9 | 11 | 395 | 1 | 371 | 4.15e-92 | 286 |
MsG0180000841.01.T01 | MTR_0129s0120 | 46.056 | 393 | 187 | 14 | 12 | 391 | 7 | 387 | 4.62e-89 | 278 |
MsG0180000841.01.T01 | MTR_2g038680 | 45.293 | 393 | 186 | 10 | 11 | 377 | 5 | 394 | 5.84e-86 | 271 |
MsG0180000841.01.T01 | MTR_3g011120 | 45.251 | 358 | 168 | 12 | 12 | 363 | 4 | 339 | 1.35e-83 | 263 |
MsG0180000841.01.T01 | MTR_0129s0050 | 44.862 | 399 | 189 | 13 | 12 | 386 | 4 | 395 | 1.53e-83 | 265 |
MsG0180000841.01.T01 | MTR_5g096630 | 46.243 | 346 | 167 | 8 | 7 | 339 | 1 | 340 | 3.22e-83 | 264 |
MsG0180000841.01.T01 | MTR_1g007450 | 48.286 | 350 | 161 | 9 | 11 | 349 | 1 | 341 | 1.15e-81 | 260 |
MsG0180000841.01.T01 | MTR_4g102410 | 44.780 | 364 | 177 | 11 | 11 | 359 | 50 | 404 | 1.20e-81 | 261 |
MsG0180000841.01.T01 | MTR_2g021770 | 43.666 | 371 | 186 | 10 | 11 | 363 | 1 | 366 | 1.53e-81 | 259 |
MsG0180000841.01.T01 | MTR_8g464770 | 45.938 | 357 | 171 | 11 | 11 | 363 | 1 | 339 | 4.01e-81 | 257 |
MsG0180000841.01.T01 | MTR_2g022000 | 44.324 | 370 | 175 | 11 | 7 | 351 | 1 | 364 | 1.39e-80 | 258 |
MsG0180000841.01.T01 | MTR_0054s0090 | 44.321 | 361 | 168 | 11 | 10 | 350 | 5 | 352 | 4.04e-80 | 256 |
MsG0180000841.01.T01 | MTR_5g069390 | 42.063 | 378 | 188 | 11 | 5 | 362 | 9 | 375 | 1.40e-79 | 257 |
MsG0180000841.01.T01 | MTR_5g097330 | 44.633 | 354 | 170 | 10 | 11 | 349 | 5 | 347 | 2.59e-78 | 251 |
MsG0180000841.01.T01 | MTR_6g090180 | 45.000 | 360 | 171 | 13 | 8 | 349 | 33 | 383 | 3.86e-78 | 251 |
MsG0180000841.01.T01 | MTR_2g021800 | 43.478 | 368 | 182 | 10 | 7 | 351 | 1 | 365 | 4.13e-78 | 251 |
MsG0180000841.01.T01 | MTR_2g021950 | 43.978 | 357 | 173 | 10 | 7 | 349 | 1 | 344 | 7.18e-78 | 249 |
MsG0180000841.01.T01 | MTR_8g013000 | 44.538 | 357 | 185 | 6 | 16 | 364 | 4 | 355 | 1.44e-77 | 249 |
MsG0180000841.01.T01 | MTR_7g079640 | 42.857 | 385 | 163 | 13 | 12 | 381 | 4 | 346 | 1.46e-77 | 248 |
MsG0180000841.01.T01 | MTR_4g055820 | 45.429 | 350 | 174 | 9 | 12 | 349 | 4 | 348 | 6.15e-77 | 246 |
MsG0180000841.01.T01 | MTR_7g017040 | 43.370 | 362 | 177 | 8 | 15 | 362 | 9 | 356 | 7.76e-77 | 247 |
MsG0180000841.01.T01 | MTR_4g117550 | 45.915 | 355 | 147 | 15 | 3 | 349 | 1 | 318 | 6.32e-76 | 244 |
MsG0180000841.01.T01 | MTR_8g012090 | 41.732 | 381 | 152 | 9 | 10 | 370 | 4 | 334 | 1.49e-75 | 241 |
MsG0180000841.01.T01 | MTR_6g461660 | 44.663 | 356 | 165 | 10 | 10 | 349 | 7 | 346 | 3.42e-75 | 243 |
MsG0180000841.01.T01 | MTR_0054s0100 | 42.857 | 364 | 173 | 12 | 8 | 349 | 3 | 353 | 9.62e-75 | 242 |
MsG0180000841.01.T01 | MTR_5g097220 | 41.417 | 367 | 175 | 12 | 7 | 349 | 1 | 351 | 1.73e-74 | 241 |
MsG0180000841.01.T01 | MTR_7g017130 | 44.818 | 357 | 172 | 13 | 6 | 351 | 2 | 344 | 1.86e-74 | 241 |
MsG0180000841.01.T01 | MTR_7g017170 | 44.818 | 357 | 172 | 13 | 6 | 351 | 2 | 344 | 2.72e-74 | 241 |
MsG0180000841.01.T01 | MTR_7g069550 | 43.567 | 342 | 179 | 8 | 10 | 342 | 2 | 338 | 3.41e-74 | 240 |
MsG0180000841.01.T01 | MTR_2g104340 | 43.443 | 366 | 182 | 10 | 10 | 362 | 2 | 355 | 8.50e-74 | 239 |
MsG0180000841.01.T01 | MTR_8g041270 | 42.818 | 369 | 189 | 8 | 10 | 362 | 3 | 365 | 5.29e-73 | 237 |
MsG0180000841.01.T01 | MTR_5g037680 | 43.526 | 363 | 163 | 11 | 17 | 362 | 3 | 340 | 6.25e-73 | 238 |
MsG0180000841.01.T01 | MTR_4g028680 | 39.655 | 406 | 192 | 16 | 10 | 388 | 3 | 382 | 2.29e-71 | 233 |
MsG0180000841.01.T01 | MTR_5g059430 | 40.155 | 386 | 192 | 13 | 5 | 362 | 9 | 383 | 2.40e-71 | 233 |
MsG0180000841.01.T01 | MTR_6g086825 | 42.340 | 359 | 178 | 12 | 10 | 349 | 57 | 405 | 5.55e-71 | 233 |
MsG0180000841.01.T01 | MTR_4g028750 | 41.341 | 358 | 175 | 11 | 10 | 349 | 3 | 343 | 5.10e-70 | 229 |
MsG0180000841.01.T01 | MTR_0134s0060 | 43.169 | 366 | 172 | 16 | 11 | 349 | 1 | 357 | 5.11e-70 | 229 |
MsG0180000841.01.T01 | MTR_2g064950 | 42.192 | 365 | 173 | 12 | 16 | 362 | 4 | 348 | 1.19e-69 | 228 |
MsG0180000841.01.T01 | MTR_6g079810 | 43.207 | 368 | 171 | 14 | 7 | 349 | 54 | 408 | 1.37e-69 | 230 |
MsG0180000841.01.T01 | MTR_4g028510 | 42.149 | 363 | 169 | 14 | 10 | 349 | 3 | 347 | 1.40e-69 | 230 |
MsG0180000841.01.T01 | MTR_7g016930 | 44.172 | 326 | 147 | 8 | 15 | 335 | 9 | 304 | 9.59e-69 | 224 |
MsG0180000841.01.T01 | MTR_6g080680 | 42.779 | 367 | 158 | 14 | 6 | 349 | 3 | 340 | 1.13e-68 | 226 |
MsG0180000841.01.T01 | MTR_5g072060 | 44.058 | 345 | 152 | 9 | 20 | 351 | 4 | 320 | 2.97e-68 | 230 |
MsG0180000841.01.T01 | MTR_1g007430 | 48.418 | 316 | 139 | 10 | 33 | 342 | 7 | 304 | 8.74e-68 | 221 |
MsG0180000841.01.T01 | MTR_4g014370 | 41.711 | 374 | 156 | 11 | 15 | 349 | 4 | 354 | 3.28e-67 | 222 |
MsG0180000841.01.T01 | MTR_8g467670 | 42.319 | 345 | 165 | 13 | 16 | 351 | 7 | 326 | 1.01e-66 | 220 |
MsG0180000841.01.T01 | MTR_0831s0010 | 41.765 | 340 | 169 | 13 | 19 | 349 | 47 | 366 | 1.58e-66 | 221 |
MsG0180000841.01.T01 | MTR_4g028660 | 40.884 | 362 | 172 | 14 | 10 | 349 | 3 | 344 | 2.73e-66 | 219 |
MsG0180000841.01.T01 | MTR_4g027450 | 40.884 | 362 | 172 | 14 | 10 | 349 | 3 | 344 | 2.73e-66 | 219 |
MsG0180000841.01.T01 | MTR_8g033140 | 38.802 | 384 | 191 | 10 | 10 | 362 | 5 | 375 | 5.14e-66 | 219 |
MsG0180000841.01.T01 | MTR_2g104280 | 41.033 | 368 | 191 | 12 | 13 | 362 | 5 | 364 | 5.76e-65 | 216 |
MsG0180000841.01.T01 | MTR_2g066200 | 38.440 | 359 | 179 | 11 | 11 | 351 | 1 | 335 | 1.16e-64 | 215 |
MsG0180000841.01.T01 | MTR_5g097350 | 42.075 | 347 | 168 | 11 | 7 | 341 | 1 | 326 | 1.14e-63 | 212 |
MsG0180000841.01.T01 | MTR_5g091140 | 39.426 | 383 | 186 | 12 | 3 | 369 | 27 | 379 | 8.32e-63 | 211 |
MsG0180000841.01.T01 | MTR_8g063330 | 38.235 | 374 | 206 | 11 | 11 | 372 | 1 | 361 | 1.59e-62 | 211 |
MsG0180000841.01.T01 | MTR_5g097680 | 40.633 | 379 | 174 | 15 | 11 | 348 | 6 | 374 | 3.80e-62 | 209 |
MsG0180000841.01.T01 | MTR_6g079770 | 37.831 | 415 | 224 | 14 | 8 | 394 | 3 | 411 | 5.56e-62 | 209 |
MsG0180000841.01.T01 | MTR_8g039500 | 37.465 | 355 | 177 | 10 | 11 | 351 | 1 | 324 | 6.38e-62 | 206 |
MsG0180000841.01.T01 | MTR_2g066170 | 38.136 | 354 | 185 | 11 | 11 | 351 | 1 | 333 | 7.55e-62 | 207 |
MsG0180000841.01.T01 | MTR_4g130330 | 40.227 | 353 | 168 | 13 | 19 | 349 | 4 | 335 | 2.20e-61 | 206 |
MsG0180000841.01.T01 | MTR_5g024260 | 40.379 | 369 | 171 | 14 | 10 | 351 | 6 | 352 | 7.69e-61 | 205 |
MsG0180000841.01.T01 | MTR_5g096910 | 40.274 | 365 | 171 | 14 | 19 | 363 | 14 | 351 | 2.83e-60 | 203 |
MsG0180000841.01.T01 | MTR_6g090250 | 41.547 | 349 | 157 | 14 | 40 | 349 | 29 | 369 | 3.85e-60 | 204 |
MsG0180000841.01.T01 | MTR_8g033090 | 39.730 | 370 | 155 | 15 | 21 | 348 | 13 | 356 | 4.54e-60 | 203 |
MsG0180000841.01.T01 | MTR_8g046310 | 41.457 | 357 | 146 | 15 | 1 | 339 | 1 | 312 | 1.47e-59 | 201 |
MsG0180000841.01.T01 | MTR_8g064890 | 37.772 | 413 | 199 | 22 | 11 | 401 | 1 | 377 | 3.63e-59 | 200 |
MsG0180000841.01.T01 | MTR_5g074850 | 41.436 | 362 | 174 | 14 | 11 | 349 | 23 | 369 | 2.13e-58 | 208 |
MsG0180000841.01.T01 | MTR_5g092860 | 39.227 | 362 | 170 | 11 | 40 | 380 | 20 | 352 | 3.13e-58 | 197 |
MsG0180000841.01.T01 | MTR_2g034700 | 40.000 | 365 | 162 | 16 | 16 | 362 | 7 | 332 | 4.42e-58 | 197 |
MsG0180000841.01.T01 | MTR_5g092850 | 41.935 | 341 | 155 | 14 | 21 | 339 | 15 | 334 | 5.12e-58 | 198 |
MsG0180000841.01.T01 | MTR_1g053510 | 40.608 | 362 | 161 | 15 | 10 | 339 | 2 | 341 | 1.04e-57 | 197 |
MsG0180000841.01.T01 | MTR_2g065840 | 37.466 | 371 | 189 | 14 | 11 | 363 | 1 | 346 | 4.18e-57 | 195 |
MsG0180000841.01.T01 | MTR_5g022850 | 38.068 | 352 | 154 | 8 | 7 | 349 | 1 | 297 | 4.80e-57 | 194 |
MsG0180000841.01.T01 | MTR_8g033110 | 37.940 | 369 | 172 | 12 | 11 | 340 | 1 | 351 | 6.74e-56 | 192 |
MsG0180000841.01.T01 | MTR_2g065860 | 37.216 | 352 | 183 | 10 | 11 | 346 | 1 | 330 | 2.59e-55 | 190 |
MsG0180000841.01.T01 | MTR_5g074800 | 41.000 | 300 | 161 | 7 | 61 | 351 | 1 | 293 | 1.61e-54 | 186 |
MsG0180000841.01.T01 | MTR_6g478230 | 36.290 | 372 | 181 | 11 | 5 | 349 | 10 | 352 | 2.12e-54 | 188 |
MsG0180000841.01.T01 | MTR_2g066150 | 35.072 | 345 | 177 | 10 | 11 | 349 | 1 | 304 | 1.55e-53 | 184 |
MsG0180000841.01.T01 | MTR_5g075370 | 39.718 | 355 | 172 | 13 | 21 | 349 | 7 | 345 | 8.01e-53 | 191 |
MsG0180000841.01.T01 | MTR_8g032980 | 36.364 | 385 | 186 | 11 | 21 | 364 | 15 | 381 | 1.20e-52 | 184 |
MsG0180000841.01.T01 | MTR_5g096900 | 40.936 | 342 | 148 | 13 | 11 | 327 | 1 | 313 | 1.93e-52 | 181 |
MsG0180000841.01.T01 | MTR_7g104710 | 37.386 | 329 | 146 | 11 | 7 | 319 | 1 | 285 | 9.98e-52 | 179 |
MsG0180000841.01.T01 | MTR_7g111700 | 37.135 | 377 | 163 | 12 | 7 | 362 | 1 | 324 | 1.90e-51 | 179 |
MsG0180000841.01.T01 | MTR_5g097820 | 40.288 | 278 | 137 | 12 | 11 | 275 | 8 | 269 | 5.18e-51 | 175 |
MsG0180000841.01.T01 | MTR_6g078010 | 39.355 | 310 | 139 | 12 | 59 | 349 | 1 | 280 | 5.49e-51 | 177 |
MsG0180000841.01.T01 | MTR_1g098180 | 37.758 | 339 | 159 | 13 | 12 | 344 | 4 | 296 | 9.79e-51 | 177 |
MsG0180000841.01.T01 | MTR_8g064790 | 37.322 | 351 | 137 | 13 | 12 | 355 | 5 | 279 | 3.92e-50 | 175 |
MsG0180000841.01.T01 | MTR_8g046200 | 37.313 | 402 | 177 | 18 | 12 | 362 | 3 | 380 | 4.43e-50 | 177 |
MsG0180000841.01.T01 | MTR_8g036970 | 35.714 | 350 | 142 | 12 | 26 | 362 | 2 | 281 | 1.15e-48 | 172 |
MsG0180000841.01.T01 | MTR_8g018110 | 35.561 | 374 | 172 | 13 | 11 | 348 | 1 | 341 | 3.09e-48 | 171 |
MsG0180000841.01.T01 | MTR_2g104260 | 41.754 | 285 | 146 | 10 | 10 | 283 | 2 | 277 | 6.18e-47 | 164 |
MsG0180000841.01.T01 | MTR_4g007940 | 38.127 | 299 | 153 | 12 | 72 | 351 | 4 | 289 | 2.17e-46 | 165 |
MsG0180000841.01.T01 | MTR_8g046220 | 37.135 | 377 | 178 | 15 | 19 | 362 | 14 | 364 | 3.45e-46 | 166 |
MsG0180000841.01.T01 | MTR_8g063370 | 34.375 | 352 | 182 | 14 | 28 | 363 | 30 | 348 | 1.21e-44 | 162 |
MsG0180000841.01.T01 | MTR_5g064700 | 38.125 | 320 | 157 | 11 | 63 | 348 | 3 | 315 | 1.41e-44 | 161 |
MsG0180000841.01.T01 | MTR_6g070880 | 42.437 | 238 | 115 | 8 | 17 | 240 | 27 | 256 | 1.48e-44 | 157 |
MsG0180000841.01.T01 | MTR_6g071420 | 42.437 | 238 | 115 | 8 | 17 | 240 | 27 | 256 | 1.48e-44 | 157 |
MsG0180000841.01.T01 | MTR_8g073570 | 48.889 | 180 | 79 | 7 | 11 | 187 | 1 | 170 | 2.96e-43 | 151 |
MsG0180000841.01.T01 | MTR_5g037190 | 38.849 | 278 | 133 | 8 | 7 | 276 | 1 | 249 | 3.90e-43 | 154 |
MsG0180000841.01.T01 | MTR_1g007420 | 97.368 | 76 | 2 | 0 | 426 | 501 | 115 | 190 | 1.00e-42 | 162 |
MsG0180000841.01.T01 | MTR_1g050308 | 33.148 | 359 | 146 | 10 | 5 | 349 | 17 | 295 | 5.25e-42 | 153 |
MsG0180000841.01.T01 | MTR_6g004450 | 44.444 | 216 | 93 | 8 | 176 | 376 | 49 | 252 | 8.67e-42 | 150 |
MsG0180000841.01.T01 | MTR_6g465360 | 41.453 | 234 | 112 | 9 | 10 | 225 | 50 | 276 | 1.84e-41 | 150 |
MsG0180000841.01.T01 | MTR_5g086590 | 42.308 | 208 | 91 | 7 | 145 | 345 | 15 | 200 | 1.00e-40 | 147 |
MsG0180000841.01.T01 | MTR_5g094350 | 36.644 | 292 | 136 | 10 | 18 | 288 | 9 | 272 | 3.05e-39 | 144 |
MsG0180000841.01.T01 | MTR_6g079790 | 39.313 | 262 | 130 | 10 | 107 | 348 | 1 | 253 | 2.22e-38 | 142 |
MsG0180000841.01.T01 | MTR_5g068490 | 39.357 | 249 | 115 | 11 | 105 | 349 | 8 | 224 | 2.44e-38 | 141 |
MsG0180000841.01.T01 | MTR_6g087620 | 37.037 | 270 | 117 | 8 | 96 | 349 | 1 | 233 | 5.16e-38 | 140 |
MsG0180000841.01.T01 | MTR_8g063310 | 30.905 | 398 | 215 | 19 | 13 | 387 | 13 | 373 | 3.06e-37 | 142 |
MsG0180000841.01.T01 | MTR_1g076810 | 39.224 | 232 | 120 | 4 | 12 | 238 | 8 | 223 | 1.24e-36 | 144 |
MsG0180000841.01.T01 | MTR_2g021920 | 40.708 | 226 | 117 | 8 | 176 | 386 | 37 | 260 | 5.19e-36 | 135 |
MsG0180000841.01.T01 | MTR_5g043605 | 39.608 | 255 | 120 | 12 | 106 | 349 | 54 | 285 | 1.19e-35 | 136 |
MsG0180000841.01.T01 | MTR_5g076490 | 35.759 | 316 | 141 | 13 | 59 | 348 | 1 | 280 | 2.18e-35 | 135 |
MsG0180000841.01.T01 | MTR_4g014370 | 32.964 | 361 | 150 | 11 | 1 | 349 | 2 | 282 | 4.23e-35 | 134 |
MsG0180000841.01.T01 | MTR_8g063350 | 30.704 | 355 | 167 | 13 | 22 | 363 | 14 | 302 | 5.57e-35 | 134 |
MsG0180000841.01.T01 | MTR_1g050312 | 39.098 | 266 | 119 | 12 | 89 | 349 | 10 | 237 | 9.82e-35 | 132 |
MsG0180000841.01.T01 | MTR_4g016000 | 38.028 | 213 | 107 | 9 | 148 | 355 | 2 | 194 | 8.50e-33 | 124 |
MsG0180000841.01.T01 | MTR_7g023800 | 34.091 | 308 | 132 | 13 | 61 | 349 | 1 | 256 | 2.71e-32 | 125 |
MsG0180000841.01.T01 | MTR_6g009350 | 41.304 | 184 | 80 | 5 | 176 | 347 | 8 | 175 | 3.58e-32 | 122 |
MsG0180000841.01.T01 | MTR_5g097850 | 37.349 | 249 | 80 | 9 | 118 | 351 | 6 | 193 | 6.53e-32 | 123 |
MsG0180000841.01.T01 | MTR_3g018750 | 44.382 | 178 | 80 | 7 | 176 | 340 | 3 | 174 | 2.15e-30 | 119 |
MsG0180000841.01.T01 | MTR_8g033000 | 33.913 | 345 | 167 | 14 | 59 | 364 | 1 | 323 | 4.86e-29 | 118 |
MsG0180000841.01.T01 | MTR_1g115205 | 37.549 | 253 | 104 | 11 | 18 | 258 | 25 | 235 | 3.74e-28 | 113 |
MsG0180000841.01.T01 | MTR_5g098950 | 34.649 | 228 | 100 | 6 | 144 | 363 | 89 | 275 | 1.82e-26 | 108 |
MsG0180000841.01.T01 | MTR_6g090260 | 47.368 | 133 | 64 | 4 | 223 | 349 | 75 | 207 | 2.65e-26 | 108 |
MsG0180000841.01.T01 | MTR_6g090260 | 48.485 | 66 | 33 | 1 | 6 | 70 | 3 | 68 | 5.77e-11 | 63.5 |
MsG0180000841.01.T01 | MTR_7g019250 | 33.610 | 241 | 108 | 8 | 156 | 382 | 205 | 407 | 3.79e-25 | 108 |
MsG0180000841.01.T01 | MTR_5g091150 | 35.193 | 233 | 78 | 11 | 107 | 313 | 1 | 186 | 3.81e-25 | 103 |
MsG0180000841.01.T01 | MTR_5g097650 | 42.466 | 146 | 67 | 5 | 19 | 161 | 19 | 150 | 5.01e-25 | 101 |
MsG0180000841.01.T01 | MTR_8g035690 | 38.393 | 224 | 90 | 10 | 154 | 345 | 38 | 245 | 7.80e-25 | 105 |
MsG0180000841.01.T01 | MTR_7g017150 | 45.833 | 144 | 67 | 4 | 215 | 351 | 74 | 213 | 2.74e-24 | 102 |
MsG0180000841.01.T01 | MTR_3g019290 | 35.829 | 187 | 77 | 5 | 11 | 193 | 1 | 148 | 3.20e-24 | 99.8 |
MsG0180000841.01.T01 | MTR_7g017120 | 45.139 | 144 | 68 | 4 | 215 | 351 | 73 | 212 | 1.54e-23 | 100 |
MsG0180000841.01.T01 | MTR_5g097540 | 43.056 | 144 | 75 | 5 | 223 | 364 | 97 | 235 | 1.71e-23 | 100 |
MsG0180000841.01.T01 | MTR_5g023970 | 39.645 | 169 | 86 | 5 | 223 | 376 | 11 | 178 | 2.47e-23 | 97.8 |
MsG0180000841.01.T01 | MTR_2g046830 | 25.888 | 394 | 219 | 12 | 24 | 411 | 27 | 353 | 3.73e-23 | 102 |
MsG0180000841.01.T01 | MTR_1g047080 | 33.205 | 259 | 123 | 11 | 59 | 306 | 1 | 220 | 2.09e-22 | 97.8 |
MsG0180000841.01.T01 | MTR_7g101200 | 35.644 | 202 | 94 | 8 | 145 | 339 | 40 | 212 | 5.79e-22 | 95.1 |
MsG0180000841.01.T01 | MTR_2g021150 | 27.003 | 337 | 189 | 12 | 22 | 343 | 14 | 308 | 3.49e-21 | 95.5 |
MsG0180000841.01.T01 | MTR_3g047580 | 36.364 | 154 | 64 | 5 | 11 | 157 | 1 | 127 | 1.08e-20 | 88.2 |
MsG0180000841.01.T01 | MTR_5g096070 | 35.393 | 178 | 68 | 6 | 16 | 184 | 20 | 159 | 1.73e-20 | 88.6 |
MsG0180000841.01.T01 | MTR_3g006670 | 28.440 | 327 | 186 | 12 | 22 | 339 | 49 | 336 | 1.65e-19 | 91.3 |
MsG0180000841.01.T01 | MTR_5g096920 | 43.860 | 114 | 59 | 3 | 252 | 363 | 1 | 111 | 2.98e-19 | 85.1 |
MsG0180000841.01.T01 | MTR_5g096050 | 50.926 | 108 | 40 | 3 | 252 | 346 | 1 | 108 | 3.79e-19 | 83.6 |
MsG0180000841.01.T01 | MTR_3g110690 | 72.222 | 54 | 14 | 1 | 449 | 501 | 1 | 54 | 5.41e-19 | 90.9 |
MsG0180000841.01.T01 | MTR_5g057790 | 26.061 | 330 | 195 | 10 | 22 | 343 | 46 | 334 | 6.78e-19 | 89.0 |
MsG0180000841.01.T01 | MTR_8g041440 | 54.321 | 81 | 31 | 1 | 13 | 93 | 6 | 80 | 1.14e-18 | 82.0 |
MsG0180000841.01.T01 | MTR_2g046920 | 26.300 | 327 | 193 | 13 | 22 | 341 | 24 | 309 | 2.28e-18 | 87.4 |
MsG0180000841.01.T01 | MTR_5g057710 | 24.242 | 330 | 201 | 8 | 22 | 343 | 46 | 334 | 1.40e-17 | 85.1 |
MsG0180000841.01.T01 | MTR_5g049560 | 37.500 | 152 | 71 | 6 | 59 | 191 | 1 | 147 | 1.69e-17 | 82.8 |
MsG0180000841.01.T01 | MTR_2g046900 | 25.836 | 329 | 200 | 11 | 22 | 341 | 28 | 321 | 2.88e-17 | 84.0 |
MsG0180000841.01.T01 | MTR_2g047832 | 24.190 | 401 | 234 | 16 | 22 | 395 | 29 | 386 | 4.44e-17 | 84.0 |
MsG0180000841.01.T01 | MTR_5g066420 | 43.333 | 120 | 57 | 4 | 252 | 362 | 1 | 118 | 1.44e-16 | 77.4 |
MsG0180000841.01.T01 | MTR_6g079730 | 47.959 | 98 | 45 | 3 | 255 | 349 | 1 | 95 | 1.46e-16 | 77.0 |
MsG0180000841.01.T01 | MTR_3g034180 | 24.277 | 346 | 201 | 13 | 16 | 341 | 117 | 421 | 1.62e-16 | 82.4 |
MsG0180000841.01.T01 | MTR_3g030620 | 43.750 | 112 | 56 | 3 | 245 | 349 | 16 | 127 | 1.71e-16 | 77.8 |
MsG0180000841.01.T01 | MTR_4g094365 | 24.638 | 345 | 195 | 14 | 13 | 341 | 1 | 296 | 2.18e-16 | 81.3 |
MsG0180000841.01.T01 | MTR_2g028140 | 26.627 | 338 | 209 | 12 | 21 | 339 | 4 | 321 | 2.48e-16 | 81.6 |
MsG0180000841.01.T01 | MTR_4g116330 | 25.970 | 335 | 197 | 13 | 16 | 341 | 17 | 309 | 4.48e-16 | 80.5 |
MsG0180000841.01.T01 | MTR_2g029990 | 25.507 | 345 | 213 | 12 | 23 | 362 | 52 | 357 | 4.60e-16 | 80.5 |
MsG0180000841.01.T01 | MTR_2g028130 | 25.723 | 346 | 219 | 11 | 22 | 349 | 5 | 330 | 4.68e-16 | 80.5 |
MsG0180000841.01.T01 | MTR_3g034130 | 23.256 | 344 | 205 | 10 | 17 | 341 | 4 | 307 | 1.01e-15 | 79.3 |
MsG0180000841.01.T01 | MTR_4g023080 | 26.269 | 335 | 194 | 14 | 16 | 343 | 3 | 291 | 1.05e-15 | 79.0 |
MsG0180000841.01.T01 | MTR_4g094378 | 69.231 | 52 | 16 | 0 | 450 | 501 | 38 | 89 | 1.78e-15 | 79.7 |
MsG0180000841.01.T01 | MTR_0667s0010 | 25.148 | 338 | 198 | 12 | 21 | 339 | 5 | 306 | 4.46e-15 | 77.4 |
MsG0180000841.01.T01 | MTR_1g068875 | 25.532 | 329 | 192 | 15 | 22 | 339 | 4 | 290 | 4.59e-15 | 77.4 |
MsG0180000841.01.T01 | MTR_1g097560 | 26.970 | 330 | 192 | 15 | 13 | 339 | 27 | 310 | 5.07e-15 | 77.0 |
MsG0180000841.01.T01 | MTR_2g031640 | 26.426 | 333 | 187 | 14 | 22 | 339 | 6 | 295 | 5.20e-15 | 77.0 |
MsG0180000841.01.T01 | MTR_3g009310 | 25.000 | 332 | 194 | 12 | 22 | 342 | 42 | 329 | 6.15e-15 | 77.0 |
MsG0180000841.01.T01 | MTR_8g101580 | 25.526 | 333 | 183 | 13 | 30 | 346 | 54 | 337 | 9.55e-15 | 76.6 |
MsG0180000841.01.T01 | MTR_4g133170 | 25.000 | 328 | 194 | 14 | 22 | 339 | 4 | 289 | 1.11e-14 | 76.3 |
MsG0180000841.01.T01 | MTR_2g031720 | 25.301 | 332 | 196 | 12 | 22 | 339 | 6 | 299 | 1.20e-14 | 76.3 |
MsG0180000841.01.T01 | MTR_0115s0020 | 28.169 | 284 | 165 | 12 | 20 | 287 | 8 | 268 | 1.56e-14 | 75.9 |
MsG0180000841.01.T01 | MTR_3g011060 | 26.154 | 325 | 205 | 11 | 22 | 339 | 28 | 324 | 1.56e-14 | 75.9 |
MsG0180000841.01.T01 | MTR_4g021785 | 25.602 | 332 | 185 | 12 | 21 | 341 | 8 | 288 | 1.77e-14 | 75.1 |
MsG0180000841.01.T01 | MTR_1g037540 | 24.138 | 435 | 243 | 19 | 25 | 414 | 8 | 400 | 2.68e-14 | 75.1 |
MsG0180000841.01.T01 | MTR_6g065980 | 24.000 | 350 | 205 | 11 | 22 | 365 | 16 | 310 | 5.09e-14 | 73.9 |
MsG0180000841.01.T01 | MTR_2g021155 | 25.424 | 354 | 219 | 15 | 25 | 372 | 39 | 353 | 6.32e-14 | 75.1 |
MsG0180000841.01.T01 | MTR_3g007410 | 26.606 | 327 | 177 | 14 | 30 | 340 | 60 | 339 | 7.22e-14 | 73.9 |
MsG0180000841.01.T01 | MTR_1g068835 | 23.653 | 334 | 193 | 13 | 22 | 339 | 4 | 291 | 7.23e-14 | 73.6 |
MsG0180000841.01.T01 | MTR_3g083010 | 25.444 | 338 | 212 | 13 | 22 | 340 | 6 | 322 | 7.52e-14 | 73.9 |
MsG0180000841.01.T01 | MTR_4g117780 | 25.610 | 328 | 196 | 12 | 22 | 341 | 11 | 298 | 1.36e-13 | 72.8 |
MsG0180000841.01.T01 | MTR_2g025960 | 27.941 | 204 | 118 | 8 | 146 | 339 | 31 | 215 | 1.73e-13 | 71.6 |
MsG0180000841.01.T01 | MTR_3g011100 | 24.316 | 329 | 206 | 10 | 22 | 342 | 235 | 528 | 1.83e-13 | 73.2 |
MsG0180000841.01.T01 | MTR_2g024110 | 23.836 | 365 | 225 | 13 | 22 | 374 | 4 | 327 | 2.44e-13 | 72.0 |
MsG0180000841.01.T01 | MTR_3g009240 | 24.064 | 374 | 213 | 16 | 2 | 360 | 16 | 333 | 4.10e-13 | 71.2 |
MsG0180000841.01.T01 | MTR_2g026010 | 27.341 | 267 | 155 | 13 | 106 | 351 | 60 | 308 | 5.90e-13 | 70.9 |
MsG0180000841.01.T01 | MTR_8g467140 | 24.925 | 333 | 182 | 14 | 22 | 336 | 32 | 314 | 7.37e-13 | 70.1 |
MsG0180000841.01.T01 | MTR_3g024150 | 24.615 | 325 | 189 | 10 | 25 | 339 | 38 | 316 | 1.03e-12 | 70.1 |
MsG0180000841.01.T01 | MTR_5g097660 | 60.714 | 56 | 21 | 1 | 292 | 346 | 6 | 61 | 1.85e-12 | 64.7 |
MsG0180000841.01.T01 | MTR_4g094400 | 41.121 | 107 | 47 | 4 | 248 | 338 | 6 | 112 | 2.46e-12 | 64.7 |
MsG0180000841.01.T01 | MTR_6g087660 | 48.684 | 76 | 36 | 2 | 10 | 82 | 5 | 80 | 2.61e-12 | 66.2 |
MsG0180000841.01.T01 | MTR_8g013010 | 26.866 | 268 | 159 | 10 | 21 | 283 | 53 | 288 | 3.04e-12 | 68.2 |
MsG0180000841.01.T01 | MTR_5g097210 | 26.524 | 328 | 192 | 15 | 22 | 341 | 9 | 295 | 3.82e-12 | 68.2 |
MsG0180000841.01.T01 | MTR_3g036430 | 23.476 | 328 | 167 | 11 | 22 | 339 | 20 | 273 | 3.87e-12 | 68.2 |
MsG0180000841.01.T01 | MTR_7g056710 | 23.907 | 343 | 193 | 11 | 20 | 340 | 16 | 312 | 6.64e-12 | 67.4 |
MsG0180000841.01.T01 | MTR_5g086780 | 44.318 | 88 | 46 | 2 | 278 | 362 | 123 | 210 | 6.88e-12 | 65.9 |
MsG0180000841.01.T01 | MTR_5g086780 | 51.613 | 62 | 28 | 1 | 7 | 66 | 1 | 62 | 6.13e-11 | 62.8 |
MsG0180000841.01.T01 | MTR_4g080200 | 24.012 | 329 | 188 | 13 | 25 | 340 | 6 | 285 | 7.26e-12 | 67.4 |
MsG0180000841.01.T01 | MTR_3g030350 | 23.708 | 329 | 193 | 10 | 22 | 339 | 35 | 316 | 9.82e-12 | 67.0 |
MsG0180000841.01.T01 | MTR_1g009110 | 23.324 | 343 | 209 | 12 | 19 | 343 | 11 | 317 | 1.05e-11 | 67.0 |
MsG0180000841.01.T01 | MTR_3g030330 | 23.209 | 349 | 205 | 9 | 1 | 339 | 1 | 296 | 1.32e-11 | 66.6 |
MsG0180000841.01.T01 | MTR_1g068860 | 25.602 | 332 | 191 | 16 | 22 | 339 | 4 | 293 | 1.60e-11 | 66.2 |
MsG0180000841.01.T01 | MTR_2g021190 | 23.977 | 342 | 223 | 13 | 1 | 339 | 1 | 308 | 1.81e-11 | 66.2 |
MsG0180000841.01.T01 | MTR_4g116340 | 27.686 | 242 | 119 | 8 | 25 | 258 | 39 | 232 | 1.83e-11 | 64.7 |
MsG0180000841.01.T01 | MTR_2g078900 | 23.276 | 348 | 204 | 11 | 7 | 339 | 14 | 313 | 1.86e-11 | 65.9 |
MsG0180000841.01.T01 | MTR_1g055375 | 24.074 | 324 | 205 | 12 | 21 | 336 | 3 | 293 | 2.10e-11 | 65.9 |
MsG0180000841.01.T01 | MTR_5g070130 | 25.284 | 352 | 194 | 16 | 16 | 343 | 5 | 311 | 2.41e-11 | 65.9 |
MsG0180000841.01.T01 | MTR_0064s0160 | 24.069 | 349 | 222 | 14 | 20 | 347 | 40 | 366 | 3.94e-11 | 65.5 |
MsG0180000841.01.T01 | MTR_5g070088 | 25.364 | 343 | 208 | 13 | 17 | 340 | 2 | 315 | 4.97e-11 | 65.1 |
MsG0180000841.01.T01 | MTR_1g054575 | 23.699 | 346 | 220 | 12 | 22 | 364 | 52 | 356 | 7.83e-11 | 65.1 |
MsG0180000841.01.T01 | MTR_3g010620 | 22.775 | 382 | 217 | 15 | 25 | 390 | 39 | 358 | 9.98e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000841.01.T01 | AT1G58350 | 68.182 | 66 | 21 | 0 | 436 | 501 | 22 | 87 | 6.41e-24 | 106 |
MsG0180000841.01.T01 | AT1G58350 | 68.182 | 66 | 21 | 0 | 436 | 501 | 22 | 87 | 6.51e-24 | 106 |
MsG0180000841.01.T01 | AT1G58350 | 68.182 | 66 | 21 | 0 | 436 | 501 | 22 | 87 | 6.51e-24 | 106 |
MsG0180000841.01.T01 | AT1G58350 | 68.182 | 66 | 21 | 0 | 436 | 501 | 22 | 87 | 6.51e-24 | 106 |
MsG0180000841.01.T01 | AT1G09980 | 66.667 | 66 | 22 | 0 | 436 | 501 | 22 | 87 | 3.54e-23 | 103 |
MsG0180000841.01.T01 | AT1G09980 | 66.667 | 66 | 22 | 0 | 436 | 501 | 22 | 87 | 3.55e-23 | 103 |
MsG0180000841.01.T01 | AT1G09980 | 66.667 | 66 | 22 | 0 | 436 | 501 | 22 | 87 | 3.55e-23 | 103 |
MsG0180000841.01.T01 | AT4G12560 | 24.848 | 330 | 206 | 8 | 22 | 339 | 4 | 303 | 2.61e-14 | 75.1 |
MsG0180000841.01.T01 | AT4G12560 | 24.848 | 330 | 206 | 8 | 22 | 339 | 4 | 303 | 2.61e-14 | 75.1 |
MsG0180000841.01.T01 | AT4G12560 | 24.848 | 330 | 206 | 8 | 22 | 339 | 4 | 303 | 2.61e-14 | 75.1 |
MsG0180000841.01.T01 | AT3G06240 | 22.108 | 389 | 225 | 14 | 22 | 372 | 36 | 384 | 6.08e-13 | 71.2 |
MsG0180000841.01.T01 | AT3G16210 | 24.468 | 282 | 145 | 10 | 18 | 289 | 1 | 224 | 1.76e-12 | 69.3 |
Find 94 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTATGATGCATTTGCTTTA+TGG | 0.114074 | 1:-11929182 | MsG0180000841.01.T01:CDS |
TGACTATGATATTCGCATTT+TGG | 0.149886 | 1:-11929105 | MsG0180000841.01.T01:CDS |
CGGTATATGTTCATAAAATT+AGG | 0.155077 | 1:+11929296 | None:intergenic |
CTGCAATTACTTGTTCCTTA+TGG | 0.209355 | 1:+11926424 | None:intergenic |
TGGAGACCGGGGAAGTATTA+TGG | 0.216647 | 1:-11928682 | MsG0180000841.01.T01:CDS |
TGTGGAACATACATTGATTT+TGG | 0.226710 | 1:-11928841 | MsG0180000841.01.T01:CDS |
GGAACAAGTAATTGCAGTTT+TGG | 0.233451 | 1:-11926418 | MsG0180000841.01.T01:CDS |
TGGCCACCGGCCTGACCTTT+AGG | 0.241492 | 1:+11925328 | None:intergenic |
GACAATGAAAATATGTCTTT+TGG | 0.255440 | 1:-11925118 | MsG0180000841.01.T01:CDS |
TTGAAGTCTTTGAAACGTTT+TGG | 0.259671 | 1:-11929356 | MsG0180000841.01.T01:CDS |
GAACGTTCTTCAGTAGAATT+AGG | 0.260788 | 1:+11929203 | None:intergenic |
GTCAACTGCAGCTGCTAATA+AGG | 0.267664 | 1:+11925625 | None:intergenic |
GTGCACTTGATGATGTTAAA+TGG | 0.278081 | 1:-11928567 | MsG0180000841.01.T01:CDS |
TTGATTTCAAATTACATGTT+AGG | 0.291252 | 1:-11928755 | MsG0180000841.01.T01:CDS |
TGCTTTCGAAATATCAATCT+TGG | 0.307610 | 1:-11928511 | MsG0180000841.01.T01:CDS |
TCTAAATTATGGAAATGTTA+TGG | 0.313721 | 1:-11926393 | MsG0180000841.01.T01:CDS |
GTGAGACAATCTCTTGTAAA+AGG | 0.313968 | 1:+11929225 | None:intergenic |
GGTATATGTTCATAAAATTA+GGG | 0.317738 | 1:+11929297 | None:intergenic |
ATACTTGGTGTCATTTGATT+TGG | 0.321516 | 1:-11928655 | MsG0180000841.01.T01:CDS |
TTGGATGTGTATCTAAATCT+TGG | 0.328143 | 1:-11929337 | MsG0180000841.01.T01:CDS |
AGATTGCAATCTACATTCAT+AGG | 0.344134 | 1:-11925287 | MsG0180000841.01.T01:CDS |
GGCCACCGGCCTGACCTTTA+GGG | 0.355431 | 1:+11925329 | None:intergenic |
TCAGGTAGTACAAGATCAAT+AGG | 0.357179 | 1:+11928981 | None:intergenic |
CTTTGAATTCCTCAGTGGTT+GGG | 0.366100 | 1:+11929018 | None:intergenic |
ACATAGAAGGTAAGATCATT+AGG | 0.384537 | 1:+11929395 | None:intergenic |
ATTGAGCGTCCTATCAAATC+AGG | 0.388616 | 1:-11928429 | MsG0180000841.01.T01:intron |
TGGATGTGTATCTAAATCTT+GGG | 0.394505 | 1:-11929336 | MsG0180000841.01.T01:CDS |
GTCATTGGCACGGTGGAGAC+CGG | 0.410567 | 1:-11928695 | MsG0180000841.01.T01:CDS |
GCATACGATCAAAAGCAAAA+TGG | 0.415758 | 1:+11925657 | None:intergenic |
AAAATTCATGTAAGAGGGAA+TGG | 0.415980 | 1:+11928608 | None:intergenic |
GGAGACCGGGGAAGTATTAT+GGG | 0.421149 | 1:-11928681 | MsG0180000841.01.T01:CDS |
CCAGTCAAAATTCATGTAAG+AGG | 0.421797 | 1:+11928602 | None:intergenic |
AAATTGTGCTTTGTTCCATA+AGG | 0.425700 | 1:-11926439 | MsG0180000841.01.T01:CDS |
CAGTTGACTCTTTCAAAAGT+TGG | 0.427268 | 1:-11925715 | MsG0180000841.01.T01:CDS |
AGCTCATTACCTGATTTGAT+AGG | 0.433529 | 1:+11928420 | None:intergenic |
TTGAAGACAAACCATGTCAT+TGG | 0.443064 | 1:-11929474 | None:intergenic |
GCTTTGAATTCCTCAGTGGT+TGG | 0.446748 | 1:+11929017 | None:intergenic |
ATTTCTTTGATGCTCTGTCA+TGG | 0.447701 | 1:-11928815 | MsG0180000841.01.T01:CDS |
GCTTTCGAAATATCAATCTT+GGG | 0.450541 | 1:-11928510 | MsG0180000841.01.T01:CDS |
TAATTTAGATAGAACATAGA+AGG | 0.452664 | 1:+11929382 | None:intergenic |
GCTGCTAATAAGGATGATAA+AGG | 0.455204 | 1:+11925635 | None:intergenic |
TTACATGTTAGGAAAATAGA+TGG | 0.462052 | 1:-11928744 | MsG0180000841.01.T01:CDS |
TCATTGGCACGGTGGAGACC+GGG | 0.465613 | 1:-11928694 | MsG0180000841.01.T01:CDS |
AAGTATTATGGGAGAATACT+TGG | 0.466255 | 1:-11928670 | MsG0180000841.01.T01:CDS |
ATATCAATCTTGGGAGAACT+AGG | 0.482392 | 1:-11928501 | MsG0180000841.01.T01:CDS |
TATTCGAAATAAAATTGTTA+CGG | 0.483996 | 1:+11929276 | None:intergenic |
TGCCACACTCCCTAAAGGTC+AGG | 0.489163 | 1:-11925338 | MsG0180000841.01.T01:CDS |
TCATATTGAACAACTCTAGC+TGG | 0.492713 | 1:+11925091 | None:intergenic |
TTTCTTTGATGCTCTGTCAT+GGG | 0.500585 | 1:-11928814 | MsG0180000841.01.T01:CDS |
CAAGTATCATCGCGGTAAGA+AGG | 0.503011 | 1:+11929251 | None:intergenic |
AGCTTAAAGTTACTATGAGA+TGG | 0.503568 | 1:-11925144 | MsG0180000841.01.T01:CDS |
GCTAGAGTTGTTCAATATGA+AGG | 0.511131 | 1:-11925088 | MsG0180000841.01.T01:CDS |
GGCCATGTTTGAAGCTGTGC+AGG | 0.512554 | 1:-11925310 | MsG0180000841.01.T01:CDS |
ATCAATAGGGCTAGGTGGAA+TGG | 0.514520 | 1:+11928995 | None:intergenic |
TCATAGTCATCCTCGTAAAA+CGG | 0.519857 | 1:+11929119 | None:intergenic |
ACATGGATGGAATGTGTCAT+TGG | 0.523316 | 1:-11928710 | MsG0180000841.01.T01:CDS |
ACATTCCATCCATGTATGAT+CGG | 0.524975 | 1:+11928718 | None:intergenic |
AACTAGGCGTCAAAGAATCA+TGG | 0.525691 | 1:-11928485 | MsG0180000841.01.T01:CDS |
AGATGGTGCCCGATCATACA+TGG | 0.530977 | 1:-11928727 | MsG0180000841.01.T01:CDS |
AAATTCATGTAAGAGGGAAT+GGG | 0.536071 | 1:+11928609 | None:intergenic |
CATTCCATCCATGTATGATC+GGG | 0.545795 | 1:+11928719 | None:intergenic |
TGTAATGCCACACTCCCTAA+AGG | 0.546257 | 1:-11925343 | MsG0180000841.01.T01:CDS |
ATGAGTACCCCTGATGCAAA+AGG | 0.548519 | 1:+11925250 | None:intergenic |
AGTACAAGATCAATAGGGCT+AGG | 0.558262 | 1:+11928987 | None:intergenic |
CAGTCAAAATTCATGTAAGA+GGG | 0.568067 | 1:+11928603 | None:intergenic |
GCTTAAAGTTACTATGAGAT+GGG | 0.568944 | 1:-11925143 | MsG0180000841.01.T01:CDS |
CAGGTAGTACAAGATCAATA+GGG | 0.579824 | 1:+11928982 | None:intergenic |
TTGATAGGACGCTCAATCAA+AGG | 0.580470 | 1:+11928435 | None:intergenic |
TGCATTTGCTTTATGGTGAG+AGG | 0.580522 | 1:-11929175 | MsG0180000841.01.T01:CDS |
CTCCTGCACAGCTTCAAACA+TGG | 0.582463 | 1:+11925308 | None:intergenic |
CAGCTGCAGTTGACTGTGGA+GGG | 0.583009 | 1:-11925616 | MsG0180000841.01.T01:intron |
ATTCTCCCATAATACTTCCC+CGG | 0.583710 | 1:+11928676 | None:intergenic |
ATAGAAGTTGGGCAGTAGAG+TGG | 0.591418 | 1:-11925374 | MsG0180000841.01.T01:CDS |
ACACTCCCTAAAGGTCAGGC+CGG | 0.592652 | 1:-11925334 | MsG0180000841.01.T01:CDS |
TTAGCAGCTGCAGTTGACTG+TGG | 0.594755 | 1:-11925620 | MsG0180000841.01.T01:CDS |
GTCATTTGATTTGGTTAACG+AGG | 0.595132 | 1:-11928646 | MsG0180000841.01.T01:CDS |
CTCCCTAAAGGTCAGGCCGG+TGG | 0.596242 | 1:-11925331 | MsG0180000841.01.T01:CDS |
AATGTCTGTCTCAAATGAGA+AGG | 0.597756 | 1:-11929432 | MsG0180000841.01.T01:CDS |
CTTTATAGTCATCTCTGACA+TGG | 0.603465 | 1:+11928919 | None:intergenic |
GGCCTGACCTTTAGGGAGTG+TGG | 0.605735 | 1:+11925336 | None:intergenic |
CATTGGCACGGTGGAGACCG+GGG | 0.609158 | 1:-11928693 | MsG0180000841.01.T01:CDS |
GGTGCCCGATCATACATGGA+TGG | 0.623354 | 1:-11928723 | MsG0180000841.01.T01:CDS |
ACAGCTTCAAACATGGCCAC+CGG | 0.630408 | 1:+11925315 | None:intergenic |
TATCTTCGACTCCAATGACA+TGG | 0.636396 | 1:+11929463 | None:intergenic |
TCATCCTCGTAAAACGGAGG+CGG | 0.644597 | 1:+11929125 | None:intergenic |
GCAGCTGCAGTTGACTGTGG+AGG | 0.651894 | 1:-11925617 | MsG0180000841.01.T01:CDS |
ACAAGATCAATAGGGCTAGG+TGG | 0.658304 | 1:+11928990 | None:intergenic |
AATGGCTTTGAATTCCTCAG+TGG | 0.664569 | 1:+11929013 | None:intergenic |
TAAAGTTACTATGAGATGGG+AGG | 0.679291 | 1:-11925140 | MsG0180000841.01.T01:CDS |
GATGGAATGTGTCATTGGCA+CGG | 0.684958 | 1:-11928705 | MsG0180000841.01.T01:CDS |
TAGTCATCCTCGTAAAACGG+AGG | 0.702250 | 1:+11929122 | None:intergenic |
ATTATGGAACCCAACCACTG+AGG | 0.717734 | 1:-11929027 | MsG0180000841.01.T01:CDS |
GGAATGTGTCATTGGCACGG+TGG | 0.723007 | 1:-11928702 | MsG0180000841.01.T01:CDS |
AAAGGAGACAAGTATCATCG+CGG | 0.754353 | 1:+11929243 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAGATTAAAATTATTA+AGG | + | Chr1:11926405-11926424 | None:intergenic | 10.0% |
!! | AAATTACAAATAATCATAAA+AGG | + | Chr1:11926694-11926713 | None:intergenic | 10.0% |
!! | TAATTATGTCAAATTTATTA+GGG | + | Chr1:11927745-11927764 | None:intergenic | 10.0% |
!! | TTAATTATGTCAAATTTATT+AGG | + | Chr1:11927746-11927765 | None:intergenic | 10.0% |
!!! | TTTTATCAAATTTATTTTGA+AGG | - | Chr1:11926422-11926441 | MsG0180000841.01.T01:CDS | 10.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | - | Chr1:11927670-11927689 | MsG0180000841.01.T01:intron | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | + | Chr1:11927689-11927670 | None:intergenic | 15.0% |
!! | AATAAAATATCAAACTTACT+TGG | - | Chr1:11927038-11927057 | MsG0180000841.01.T01:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | - | Chr1:11927671-11927690 | MsG0180000841.01.T01:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | + | Chr1:11927690-11927671 | None:intergenic | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | + | Chr1:11927449-11927468 | None:intergenic | 15.0% |
!! | TAAGACTTCAAAATAAAAAT+TGG | + | Chr1:11929332-11929351 | None:intergenic | 15.0% |
!! | TATTCGAAATAAAATTGTTA+CGG | + | Chr1:11925263-11925282 | None:intergenic | 15.0% |
!! | TTATGTTATATATGTATGTA+TGG | - | Chr1:11928178-11928197 | MsG0180000841.01.T01:intron | 15.0% |
!! | TTCAAAAATTTAAGAGTTTA+AGG | - | Chr1:11927580-11927599 | MsG0180000841.01.T01:intron | 15.0% |
!! | TTGATATCATATTAGAATTT+GGG | + | Chr1:11928350-11928369 | None:intergenic | 15.0% |
!! | TTTGATATCATATTAGAATT+TGG | + | Chr1:11928351-11928370 | None:intergenic | 15.0% |
!!! | AATTTATTTTTTTTGAAGGA+AGG | - | Chr1:11926460-11926479 | MsG0180000841.01.T01:intron | 15.0% |
!!! | AATTTTGCAATAATTTTTTG+CGG | + | Chr1:11927414-11927433 | None:intergenic | 15.0% |
!!! | TTGAATTTTGAATTATTTTG+AGG | - | Chr1:11928596-11928615 | MsG0180000841.01.T01:CDS | 15.0% |
!! | AAAATATGCAACTATATGAT+AGG | - | Chr1:11926640-11926659 | MsG0180000841.01.T01:intron | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | + | Chr1:11927319-11927338 | None:intergenic | 20.0% |
!! | AATTCAAGTCATAAACAAAA+AGG | + | Chr1:11928583-11928602 | None:intergenic | 20.0% |
!! | AGAACAAAAATAAGAAATTG+AGG | + | Chr1:11926762-11926781 | None:intergenic | 20.0% |
!! | ATCATTCATACAAATTGAAA+TGG | + | Chr1:11926521-11926540 | None:intergenic | 20.0% |
!! | GGTATATGTTCATAAAATTA+GGG | + | Chr1:11925242-11925261 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | + | Chr1:11927320-11927339 | None:intergenic | 20.0% |
!! | TAATAAAAATCGAAATTTGC+AGG | + | Chr1:11927973-11927992 | None:intergenic | 20.0% |
!! | TAATTTAGATAGAACATAGA+AGG | + | Chr1:11925157-11925176 | None:intergenic | 20.0% |
!! | TCAAGATTTAAATCATGAAT+CGG | + | Chr1:11928753-11928772 | None:intergenic | 20.0% |
!! | TCTAAATTATGGAAATGTTA+TGG | - | Chr1:11928143-11928162 | MsG0180000841.01.T01:intron | 20.0% |
!! | TGAATATCTTGTCTAAAAAA+AGG | + | Chr1:11926308-11926327 | None:intergenic | 20.0% |
!! | TTGATTTCAAATTACATGTT+AGG | - | Chr1:11925781-11925800 | MsG0180000841.01.T01:intron | 20.0% |
!!! | AATTAGGGTTTTCAAATAAA+AGG | + | Chr1:11925227-11925246 | None:intergenic | 20.0% |
!!! | CATATTTTGCTTTATATAGA+TGG | - | Chr1:11929365-11929384 | MsG0180000841.01.T01:CDS | 20.0% |
!!! | GATTTTTATTACATTTTCTG+AGG | - | Chr1:11927982-11928001 | MsG0180000841.01.T01:intron | 20.0% |
! | AATTGTATGACATTCGATAA+AGG | + | Chr1:11926549-11926568 | None:intergenic | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | + | Chr1:11927286-11927305 | None:intergenic | 25.0% |
! | AGTTACGTGAATTATGATTT+CGG | + | Chr1:11927828-11927847 | None:intergenic | 25.0% |
! | ATTACCTGAAATTGAGAAAT+GGG | + | Chr1:11927883-11927902 | None:intergenic | 25.0% |
! | CGGTATATGTTCATAAAATT+AGG | + | Chr1:11925243-11925262 | None:intergenic | 25.0% |
! | GAACATGTGTTTATAAGTTA+GGG | - | Chr1:11928466-11928485 | MsG0180000841.01.T01:CDS | 25.0% |
! | GATAAATGATTAGAGATCAA+TGG | - | Chr1:11926830-11926849 | MsG0180000841.01.T01:intron | 25.0% |
! | TAAGAAATGTGTTCGATTAA+AGG | + | Chr1:11927127-11927146 | None:intergenic | 25.0% |
! | TATCATATTAGAATTTGGGT+TGG | + | Chr1:11928346-11928365 | None:intergenic | 25.0% |
! | TATTACCTGAAATTGAGAAA+TGG | + | Chr1:11927884-11927903 | None:intergenic | 25.0% |
! | TCATAAACAAAAAGGAAAAG+TGG | + | Chr1:11928575-11928594 | None:intergenic | 25.0% |
! | TGAACATGTGTTTATAAGTT+AGG | - | Chr1:11928465-11928484 | MsG0180000841.01.T01:CDS | 25.0% |
! | TGGAAAGAACAAAATAGAAA+TGG | + | Chr1:11929312-11929331 | None:intergenic | 25.0% |
! | TTACATGTTAGGAAAATAGA+TGG | - | Chr1:11925792-11925811 | MsG0180000841.01.T01:intron | 25.0% |
! | TTTAGCATCTCTTAGAATTT+GGG | + | Chr1:11928539-11928558 | None:intergenic | 25.0% |
!! | AAATTTTGCTAAAAAAAGCC+AGG | + | Chr1:11927949-11927968 | None:intergenic | 25.0% |
!! | CTTAATGTTACTTATTGCTA+CGG | - | Chr1:11928057-11928076 | MsG0180000841.01.T01:intron | 25.0% |
!! | GACAATGAAAATATGTCTTT+TGG | - | Chr1:11929418-11929437 | MsG0180000841.01.T01:CDS | 25.0% |
!! | TTCTTTGAAAGAAAAAGAGA+AGG | - | Chr1:11926143-11926162 | MsG0180000841.01.T01:intron | 25.0% |
!!! | AATCAAACTTTGTTTTAGCA+GGG | - | Chr1:11927609-11927628 | MsG0180000841.01.T01:intron | 25.0% |
!!! | ATCCTTTTAAGTAACTTTGA+CGG | - | Chr1:11926793-11926812 | MsG0180000841.01.T01:intron | 25.0% |
!!! | TAATCAAACTTTGTTTTAGC+AGG | - | Chr1:11927608-11927627 | MsG0180000841.01.T01:intron | 25.0% |
!!! | TACAAAGTCGCTATTTTATA+GGG | + | Chr1:11927226-11927245 | None:intergenic | 25.0% |
!!! | TGTTTTGAGATATAGAAGTT+GGG | - | Chr1:11929151-11929170 | MsG0180000841.01.T01:CDS | 25.0% |
!!! | TTACAAAGTCGCTATTTTAT+AGG | + | Chr1:11927227-11927246 | None:intergenic | 25.0% |
!!! | TTGTTTTGAGATATAGAAGT+TGG | - | Chr1:11929150-11929169 | MsG0180000841.01.T01:CDS | 25.0% |
AAAATTCATGTAAGAGGGAA+TGG | + | Chr1:11925931-11925950 | None:intergenic | 30.0% | |
AAATTCATGTAAGAGGGAAT+GGG | + | Chr1:11925930-11925949 | None:intergenic | 30.0% | |
AAGTATTATGGGAGAATACT+TGG | - | Chr1:11925866-11925885 | MsG0180000841.01.T01:intron | 30.0% | |
ACAGTGTAAAAAGTAACTCT+TGG | - | Chr1:11925751-11925770 | MsG0180000841.01.T01:intron | 30.0% | |
ACATAGAAGGTAAGATCATT+AGG | + | Chr1:11925144-11925163 | None:intergenic | 30.0% | |
ACCATAACACTTATTGATGA+TGG | - | Chr1:11926872-11926891 | MsG0180000841.01.T01:intron | 30.0% | |
ACCATCATCAATAAGTGTTA+TGG | + | Chr1:11926876-11926895 | None:intergenic | 30.0% | |
AGATTGCAATCTACATTCAT+AGG | - | Chr1:11929249-11929268 | MsG0180000841.01.T01:CDS | 30.0% | |
AGCTTAAAGTTACTATGAGA+TGG | - | Chr1:11929392-11929411 | MsG0180000841.01.T01:CDS | 30.0% | |
AGTAAAAACAAGTGACATGA+CGG | + | Chr1:11928655-11928674 | None:intergenic | 30.0% | |
ATTGATCGAATTAACCATCT+TGG | + | Chr1:11928989-11929008 | None:intergenic | 30.0% | |
CAAGATTAGAACACTATGAA+AGG | + | Chr1:11927546-11927565 | None:intergenic | 30.0% | |
CAGTCAAAATTCATGTAAGA+GGG | + | Chr1:11925936-11925955 | None:intergenic | 30.0% | |
CAGTGCAGAAAAACAAAATT+AGG | + | Chr1:11927287-11927306 | None:intergenic | 30.0% | |
CGAACACATTTCTTATTCTA+AGG | - | Chr1:11927132-11927151 | MsG0180000841.01.T01:intron | 30.0% | |
GAAAATCCACATTGTAAACA+AGG | + | Chr1:11926352-11926371 | None:intergenic | 30.0% | |
GAACATGTGTTTATAAGTGA+GGG | - | Chr1:11928279-11928298 | MsG0180000841.01.T01:intron | 30.0% | |
GCTGATAGGTTTATACATTA+AGG | + | Chr1:11926620-11926639 | None:intergenic | 30.0% | |
GCTTAAAGTTACTATGAGAT+GGG | - | Chr1:11929393-11929412 | MsG0180000841.01.T01:CDS | 30.0% | |
GCTTTCGAAATATCAATCTT+GGG | - | Chr1:11926026-11926045 | MsG0180000841.01.T01:intron | 30.0% | |
GTATGTATGTGACATATATC+AGG | - | Chr1:11928785-11928804 | MsG0180000841.01.T01:CDS | 30.0% | |
GTTACGTGAATTATGATTTC+GGG | + | Chr1:11927827-11927846 | None:intergenic | 30.0% | |
GTTTAGCATCTCTTAGAATT+TGG | + | Chr1:11928540-11928559 | None:intergenic | 30.0% | |
TACCGTCAAAGTTACTTAAA+AGG | + | Chr1:11926798-11926817 | None:intergenic | 30.0% | |
TCTATGATGCATTTGCTTTA+TGG | - | Chr1:11925354-11925373 | MsG0180000841.01.T01:CDS | 30.0% | |
TGAACATGTGTTTATAAGTG+AGG | - | Chr1:11928278-11928297 | MsG0180000841.01.T01:intron | 30.0% | |
TGCTTTCGAAATATCAATCT+TGG | - | Chr1:11926025-11926044 | MsG0180000841.01.T01:intron | 30.0% | |
TGGATGTGTATCTAAATCTT+GGG | - | Chr1:11925200-11925219 | MsG0180000841.01.T01:intron | 30.0% | |
TTACCTGAAATTGAGAAATG+GGG | + | Chr1:11927882-11927901 | None:intergenic | 30.0% | |
TTCAAGCTCCTCAAATATTT+GGG | + | Chr1:11926198-11926217 | None:intergenic | 30.0% | |
TTGGATGTGTATCTAAATCT+TGG | - | Chr1:11925199-11925218 | MsG0180000841.01.T01:intron | 30.0% | |
TTTGAACACCCAAATATTTG+AGG | - | Chr1:11926187-11926206 | MsG0180000841.01.T01:intron | 30.0% | |
! | AAATTGTGCTTTGTTCCATA+AGG | - | Chr1:11928097-11928116 | MsG0180000841.01.T01:intron | 30.0% |
! | ATTTGACCTTGTTTACAATG+TGG | - | Chr1:11926343-11926362 | MsG0180000841.01.T01:intron | 30.0% |
! | CAATCCTTGTTTACTTATTG+CGG | + | Chr1:11929126-11929145 | None:intergenic | 30.0% |
! | GAGTCTTTTTGTGATAATCT+TGG | - | Chr1:11925672-11925691 | MsG0180000841.01.T01:CDS | 30.0% |
! | TACCTGATCTAGATCATTTT+TGG | - | Chr1:11925571-11925590 | MsG0180000841.01.T01:intron | 30.0% |
! | TAGTTGCATATTTTGCTGAT+AGG | + | Chr1:11926634-11926653 | None:intergenic | 30.0% |
! | TGACTATGATATTCGCATTT+TGG | - | Chr1:11925431-11925450 | MsG0180000841.01.T01:intron | 30.0% |
! | TTTTTGTGATAATCTTGGTG+TGG | - | Chr1:11925677-11925696 | MsG0180000841.01.T01:CDS | 30.0% |
!! | ACCTGATCTAGATCATTTTT+GGG | - | Chr1:11925572-11925591 | MsG0180000841.01.T01:intron | 30.0% |
!! | ATACTTGGTGTCATTTGATT+TGG | - | Chr1:11925881-11925900 | MsG0180000841.01.T01:intron | 30.0% |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | Chr1:11927701-11927720 | MsG0180000841.01.T01:intron | 30.0% |
!!! | CAGTTTTGGCTTCTAAATTA+TGG | - | Chr1:11928132-11928151 | MsG0180000841.01.T01:intron | 30.0% |
!!! | GATCATTTTTGGGATAAACA+TGG | - | Chr1:11925582-11925601 | MsG0180000841.01.T01:intron | 30.0% |
!!! | TGTGGAACATACATTGATTT+TGG | - | Chr1:11925695-11925714 | MsG0180000841.01.T01:CDS | 30.0% |
!!! | TTCGAGTTTGCTATAGTTTT+TGG | + | Chr1:11927097-11927116 | None:intergenic | 30.0% |
!!! | TTGAAGTCTTTGAAACGTTT+TGG | - | Chr1:11925180-11925199 | MsG0180000841.01.T01:intron | 30.0% |
!!! | TTTTGGGATAAACATGGATT+TGG | - | Chr1:11925588-11925607 | MsG0180000841.01.T01:intron | 30.0% |
AAAAACCTTCTTCTCAACGT+AGG | - | Chr1:11926260-11926279 | MsG0180000841.01.T01:intron | 35.0% | |
AAAGTCAGTACCAATTCCAT+TGG | - | Chr1:11928368-11928387 | MsG0180000841.01.T01:intron | 35.0% | |
AAGTAACTTTGACGGTAAGA+AGG | - | Chr1:11926801-11926820 | MsG0180000841.01.T01:intron | 35.0% | |
AAGTAGGGACTAAACTTACA+AGG | - | Chr1:11927686-11927705 | MsG0180000841.01.T01:intron | 35.0% | |
AATGTCTGTCTCAAATGAGA+AGG | - | Chr1:11925104-11925123 | MsG0180000841.01.T01:CDS | 35.0% | |
AATTGAGAAATGGGGAAATG+TGG | + | Chr1:11927874-11927893 | None:intergenic | 35.0% | |
ACATTCCATCCATGTATGAT+CGG | + | Chr1:11925821-11925840 | None:intergenic | 35.0% | |
AGACAAGATATTCATGACTG+TGG | - | Chr1:11926314-11926333 | MsG0180000841.01.T01:intron | 35.0% | |
AGTTACTTAAAAGGATCGAG+AGG | + | Chr1:11926789-11926808 | None:intergenic | 35.0% | |
ATATCAATCTTGGGAGAACT+AGG | - | Chr1:11926035-11926054 | MsG0180000841.01.T01:intron | 35.0% | |
ATGGGGAAATGTGGTAAAAT+TGG | + | Chr1:11927865-11927884 | None:intergenic | 35.0% | |
ATGTGGTAAAATTGGTTGCT+AGG | + | Chr1:11927857-11927876 | None:intergenic | 35.0% | |
ATTTCTTTGATGCTCTGTCA+TGG | - | Chr1:11925721-11925740 | MsG0180000841.01.T01:CDS | 35.0% | |
CAATAGGATCTGAATCGAAA+GGG | - | Chr1:11929031-11929050 | MsG0180000841.01.T01:CDS | 35.0% | |
CAGGTAGTACAAGATCAATA+GGG | + | Chr1:11925557-11925576 | None:intergenic | 35.0% | |
CCAGTCAAAATTCATGTAAG+AGG | + | Chr1:11925937-11925956 | None:intergenic | 35.0% | |
CGAATTAACCATCTTGGAAA+TGG | + | Chr1:11928983-11929002 | None:intergenic | 35.0% | |
CGACACATGATAGATTCAAT+AGG | - | Chr1:11929015-11929034 | MsG0180000841.01.T01:CDS | 35.0% | |
CTAACTCAAGCTTACAAAAC+CGG | + | Chr1:11928510-11928529 | None:intergenic | 35.0% | |
CTGCAATTACTTGTTCCTTA+TGG | + | Chr1:11928115-11928134 | None:intergenic | 35.0% | |
CTTCAAGCTCCTCAAATATT+TGG | + | Chr1:11926199-11926218 | None:intergenic | 35.0% | |
CTTTATAGTCATCTCTGACA+TGG | + | Chr1:11925620-11925639 | None:intergenic | 35.0% | |
GAAAGAAAAAGAGAAGGAGA+AGG | - | Chr1:11926149-11926168 | MsG0180000841.01.T01:intron | 35.0% | |
GAACGTTCTTCAGTAGAATT+AGG | + | Chr1:11925336-11925355 | None:intergenic | 35.0% | |
GATTCCGCAATAAGTAAACA+AGG | - | Chr1:11929119-11929138 | MsG0180000841.01.T01:CDS | 35.0% | |
GCATACGATCAAAAGCAAAA+TGG | + | Chr1:11928882-11928901 | None:intergenic | 35.0% | |
GCTAGAGTTGTTCAATATGA+AGG | - | Chr1:11929448-11929467 | MsG0180000841.01.T01:CDS | 35.0% | |
GCTGCTAATAAGGATGATAA+AGG | + | Chr1:11928904-11928923 | None:intergenic | 35.0% | |
GTGAGACAATCTCTTGTAAA+AGG | + | Chr1:11925314-11925333 | None:intergenic | 35.0% | |
TAAAGTTACTATGAGATGGG+AGG | - | Chr1:11929396-11929415 | MsG0180000841.01.T01:CDS | 35.0% | |
TCAATAGGATCTGAATCGAA+AGG | - | Chr1:11929030-11929049 | MsG0180000841.01.T01:CDS | 35.0% | |
TCAGGTAGTACAAGATCAAT+AGG | + | Chr1:11925558-11925577 | None:intergenic | 35.0% | |
TCATAGTCATCCTCGTAAAA+CGG | + | Chr1:11925420-11925439 | None:intergenic | 35.0% | |
TCATATTGAACAACTCTAGC+TGG | + | Chr1:11929448-11929467 | None:intergenic | 35.0% | |
TCCCAAAAATGATCTAGATC+AGG | + | Chr1:11925576-11925595 | None:intergenic | 35.0% | |
TCTACTCAACCTTACAAAAC+CGG | + | Chr1:11928322-11928341 | None:intergenic | 35.0% | |
TGTGGTAAAATTGGTTGCTA+GGG | + | Chr1:11927856-11927875 | None:intergenic | 35.0% | |
TTTCCCCATTTCTCAATTTC+AGG | - | Chr1:11927876-11927895 | MsG0180000841.01.T01:intron | 35.0% | |
TTTCTTTGATGCTCTGTCAT+GGG | - | Chr1:11925722-11925741 | MsG0180000841.01.T01:CDS | 35.0% | |
! | AATCTTGACCTTTTGCATCA+GGG | - | Chr1:11929278-11929297 | MsG0180000841.01.T01:CDS | 35.0% |
! | AGCTCATTACCTGATTTGAT+AGG | + | Chr1:11926119-11926138 | None:intergenic | 35.0% |
! | CAGTTGACTCTTTCAAAAGT+TGG | - | Chr1:11928821-11928840 | MsG0180000841.01.T01:CDS | 35.0% |
! | GGAACAAGTAATTGCAGTTT+TGG | - | Chr1:11928118-11928137 | MsG0180000841.01.T01:intron | 35.0% |
! | TGTTTAGAGTCCATGAGATA+CGG | - | Chr1:11928251-11928270 | MsG0180000841.01.T01:intron | 35.0% |
!! | AATTATGATTTCGGGTTTCC+GGG | + | Chr1:11927819-11927838 | None:intergenic | 35.0% |
!! | ACTTTTGAAAGAGTCAACTG+CGG | + | Chr1:11928821-11928840 | None:intergenic | 35.0% |
!! | CCTCTTACATGAATTTTGAC+TGG | - | Chr1:11925934-11925953 | MsG0180000841.01.T01:intron | 35.0% |
!! | GAATTATGATTTCGGGTTTC+CGG | + | Chr1:11927820-11927839 | None:intergenic | 35.0% |
!! | GGTTTTGTAAGCTTGAGTTA+GGG | - | Chr1:11928509-11928528 | MsG0180000841.01.T01:CDS | 35.0% |
!! | GTCATTTGATTTGGTTAACG+AGG | - | Chr1:11925890-11925909 | MsG0180000841.01.T01:intron | 35.0% |
!! | GTGCACTTGATGATGTTAAA+TGG | - | Chr1:11925969-11925988 | MsG0180000841.01.T01:intron | 35.0% |
!!! | AGGAGAAAAGCTTATTTTGC+TGG | - | Chr1:11929083-11929102 | MsG0180000841.01.T01:CDS | 35.0% |
!!! | GGAACATACATTGATTTTGG+AGG | - | Chr1:11925698-11925717 | MsG0180000841.01.T01:CDS | 35.0% |
!!! | GGAGAAAAGCTTATTTTGCT+GGG | - | Chr1:11929084-11929103 | MsG0180000841.01.T01:CDS | 35.0% |
AAAGGAGACAAGTATCATCG+CGG | + | Chr1:11925296-11925315 | None:intergenic | 40.0% | |
AACTAGGCGTCAAAGAATCA+TGG | - | Chr1:11926051-11926070 | MsG0180000841.01.T01:intron | 40.0% | |
AATTGGACTCCTATCACACA+CGG | + | Chr1:11928430-11928449 | None:intergenic | 40.0% | |
ACATGGATGGAATGTGTCAT+TGG | - | Chr1:11925826-11925845 | MsG0180000841.01.T01:intron | 40.0% | |
AGAGATGCTAAACCTAGTGT+AGG | - | Chr1:11928547-11928566 | MsG0180000841.01.T01:CDS | 40.0% | |
AGTACAAGATCAATAGGGCT+AGG | + | Chr1:11925552-11925571 | None:intergenic | 40.0% | |
ATTCTCCCATAATACTTCCC+CGG | + | Chr1:11925863-11925882 | None:intergenic | 40.0% | |
ATTGAGCGTCCTATCAAATC+AGG | - | Chr1:11926107-11926126 | MsG0180000841.01.T01:intron | 40.0% | |
CAACTCATATCCCATCCAAT+TGG | + | Chr1:11928447-11928466 | None:intergenic | 40.0% | |
CATTCCATCCATGTATGATC+GGG | + | Chr1:11925820-11925839 | None:intergenic | 40.0% | |
CCAATGTTCCATTTCCAAGA+TGG | - | Chr1:11928972-11928991 | MsG0180000841.01.T01:CDS | 40.0% | |
CCATCTTGGAAATGGAACAT+TGG | + | Chr1:11928975-11928994 | None:intergenic | 40.0% | |
CTTTGAATTCCTCAGTGGTT+GGG | + | Chr1:11925521-11925540 | None:intergenic | 40.0% | |
GCATCTCTTAGAATTTGGGT+TGG | + | Chr1:11928535-11928554 | None:intergenic | 40.0% | |
TCAATCCTACGTTGAGAAGA+AGG | + | Chr1:11926268-11926287 | None:intergenic | 40.0% | |
TGATAGGAGTCCAATTGGAT+GGG | - | Chr1:11928434-11928453 | MsG0180000841.01.T01:CDS | 40.0% | |
TGCATTTGCTTTATGGTGAG+AGG | - | Chr1:11925361-11925380 | MsG0180000841.01.T01:CDS | 40.0% | |
TTCTTTCTCGTTTCTGTTCC+TGG | - | Chr1:11927928-11927947 | MsG0180000841.01.T01:intron | 40.0% | |
TTGATAGGACGCTCAATCAA+AGG | + | Chr1:11926104-11926123 | None:intergenic | 40.0% | |
! | ATCTTGACCTTTTGCATCAG+GGG | - | Chr1:11929279-11929298 | MsG0180000841.01.T01:CDS | 40.0% |
! | CAATCTTGACCTTTTGCATC+AGG | - | Chr1:11929277-11929296 | MsG0180000841.01.T01:CDS | 40.0% |
! | CTCTAAACAGTGTTGAATCG+AGG | + | Chr1:11928240-11928259 | None:intergenic | 40.0% |
! | GTTTAGAGTCCATGAGATAC+GGG | - | Chr1:11928252-11928271 | MsG0180000841.01.T01:intron | 40.0% |
! | TTTAGAGTCCATGAGATACG+GGG | - | Chr1:11928253-11928272 | MsG0180000841.01.T01:intron | 40.0% |
!! | AATGGCTTTGAATTCCTCAG+TGG | + | Chr1:11925526-11925545 | None:intergenic | 40.0% |
!! | ACTTACAAGCCGGTTTTGTA+AGG | - | Chr1:11928310-11928329 | MsG0180000841.01.T01:intron | 40.0% |
!! | CAGCTTTTAACTAGCTTGTC+AGG | - | Chr1:11926580-11926599 | MsG0180000841.01.T01:intron | 40.0% |
!! | CGGTTTTGTAAGCTTGAGTT+AGG | - | Chr1:11928508-11928527 | MsG0180000841.01.T01:CDS | 40.0% |
AATTAGAGGGAGAGGCTTAG+TGG | + | Chr1:11927794-11927813 | None:intergenic | 45.0% | |
ACAAGATCAATAGGGCTAGG+TGG | + | Chr1:11925549-11925568 | None:intergenic | 45.0% | |
ATAGAAGTTGGGCAGTAGAG+TGG | - | Chr1:11929162-11929181 | MsG0180000841.01.T01:CDS | 45.0% | |
ATCAATAGGGCTAGGTGGAA+TGG | + | Chr1:11925544-11925563 | None:intergenic | 45.0% | |
ATGAGTACCCCTGATGCAAA+AGG | + | Chr1:11929289-11929308 | None:intergenic | 45.0% | |
ATTATGGAACCCAACCACTG+AGG | - | Chr1:11925509-11925528 | MsG0180000841.01.T01:intron | 45.0% | |
CAAGTATCATCGCGGTAAGA+AGG | + | Chr1:11925288-11925307 | None:intergenic | 45.0% | |
GAGAAGGAGAAGGACTATCA+TGG | - | Chr1:11926159-11926178 | MsG0180000841.01.T01:intron | 45.0% | |
GATCTGAATCGAAAGGGACT+TGG | - | Chr1:11929037-11929056 | MsG0180000841.01.T01:CDS | 45.0% | |
GGAAAAGTGGTTCCTACACT+AGG | + | Chr1:11928562-11928581 | None:intergenic | 45.0% | |
GGGTTTCCGGGTTAATTAGA+GGG | + | Chr1:11927807-11927826 | None:intergenic | 45.0% | |
GTCAACTGCAGCTGCTAATA+AGG | + | Chr1:11928914-11928933 | None:intergenic | 45.0% | |
GTGATAGGAGTCCAATTGGA+TGG | - | Chr1:11928433-11928452 | MsG0180000841.01.T01:CDS | 45.0% | |
GTGTGTGATAGGAGTCCAAT+TGG | - | Chr1:11928429-11928448 | MsG0180000841.01.T01:intron | 45.0% | |
TAGTCATCCTCGTAAAACGG+AGG | + | Chr1:11925417-11925436 | None:intergenic | 45.0% | |
TGTAATGCCACACTCCCTAA+AGG | - | Chr1:11929193-11929212 | MsG0180000841.01.T01:CDS | 45.0% | |
TTAGAGTCCATGAGATACGG+GGG | - | Chr1:11928254-11928273 | MsG0180000841.01.T01:intron | 45.0% | |
TTTGAGGAGCTTGAAGCGAA+AGG | - | Chr1:11926203-11926222 | MsG0180000841.01.T01:intron | 45.0% | |
! | GATGGAATGTGTCATTGGCA+CGG | - | Chr1:11925831-11925850 | MsG0180000841.01.T01:intron | 45.0% |
! | GCTTTGAATTCCTCAGTGGT+TGG | + | Chr1:11925522-11925541 | None:intergenic | 45.0% |
!! | GCTTACAAAACCGGCTTGTA+AGG | + | Chr1:11928501-11928520 | None:intergenic | 45.0% |
!! | TTTATTAAACTAAATTTAAA+AGG | + | Chr1:11927181-11927200 | None:intergenic | 5.0% |
!!! | ATAAGTAAATTTTTTTTTAT+AGG | - | Chr1:11927641-11927660 | MsG0180000841.01.T01:intron | 5.0% |
!!! | TAAATTTAGTTTAATAAATT+GGG | - | Chr1:11927183-11927202 | MsG0180000841.01.T01:intron | 5.0% |
!!! | TAAGTAAATTTTTTTTTATA+GGG | - | Chr1:11927642-11927661 | MsG0180000841.01.T01:intron | 5.0% |
!!! | TAGATAAATATTTTTTATTA+TGG | - | Chr1:11925493-11925512 | MsG0180000841.01.T01:intron | 5.0% |
!!! | TATTAATTTATTTTTTTTGA+AGG | - | Chr1:11926456-11926475 | MsG0180000841.01.T01:intron | 5.0% |
!!! | TTAAATTTAGTTTAATAAAT+TGG | - | Chr1:11927182-11927201 | MsG0180000841.01.T01:intron | 5.0% |
ACAGCTTCAAACATGGCCAC+CGG | + | Chr1:11929224-11929243 | None:intergenic | 50.0% | |
AGATGGTGCCCGATCATACA+TGG | - | Chr1:11925809-11925828 | MsG0180000841.01.T01:intron | 50.0% | |
AGCAGGTGGTCCAATGGAAT+TGG | + | Chr1:11928381-11928400 | None:intergenic | 50.0% | |
CGGGTTTCCGGGTTAATTAG+AGG | + | Chr1:11927808-11927827 | None:intergenic | 50.0% | |
CTCCTGCACAGCTTCAAACA+TGG | + | Chr1:11929231-11929250 | None:intergenic | 50.0% | |
GCCTCTCCCTCTAATTAACC+CGG | - | Chr1:11927798-11927817 | MsG0180000841.01.T01:intron | 50.0% | |
GTAGTGCTCACCTTACAAGC+CGG | - | Chr1:11928488-11928507 | MsG0180000841.01.T01:CDS | 50.0% | |
TCATCCTCGTAAAACGGAGG+CGG | + | Chr1:11925414-11925433 | None:intergenic | 50.0% | |
TCCGGGTTAATTAGAGGGAG+AGG | + | Chr1:11927802-11927821 | None:intergenic | 50.0% | |
TGTTCAACCCCCGTATCTCA+TGG | + | Chr1:11928264-11928283 | None:intergenic | 50.0% | |
TTAGCAGCTGCAGTTGACTG+TGG | - | Chr1:11928916-11928935 | MsG0180000841.01.T01:CDS | 50.0% | |
! | ATCTGAAGCCTGATAGCAGG+TGG | + | Chr1:11928395-11928414 | None:intergenic | 50.0% |
! | GACATCTGAAGCCTGATAGC+AGG | + | Chr1:11928398-11928417 | None:intergenic | 50.0% |
! | TTTACCGCCTCCGTTTTACG+AGG | - | Chr1:11925407-11925426 | MsG0180000841.01.T01:intron | 50.0% |
!! | GGAGACCGGGGAAGTATTAT+GGG | - | Chr1:11925855-11925874 | MsG0180000841.01.T01:intron | 50.0% |
!! | TGGAGACCGGGGAAGTATTA+TGG | - | Chr1:11925854-11925873 | MsG0180000841.01.T01:intron | 50.0% |
ACACTCCCTAAAGGTCAGGC+CGG | - | Chr1:11929202-11929221 | MsG0180000841.01.T01:CDS | 55.0% | |
AGGCTTCAGATGTCCAGTCC+TGG | - | Chr1:11928404-11928423 | MsG0180000841.01.T01:intron | 55.0% | |
CAGCTGCAGTTGACTGTGGA+GGG | - | Chr1:11928920-11928939 | MsG0180000841.01.T01:CDS | 55.0% | |
CCATTGGACCACCTGCTATC+AGG | - | Chr1:11928384-11928403 | MsG0180000841.01.T01:intron | 55.0% | |
CCTGATAGCAGGTGGTCCAA+TGG | + | Chr1:11928387-11928406 | None:intergenic | 55.0% | |
GGCAGTCGTCACTTACAAGC+CGG | - | Chr1:11928300-11928319 | MsG0180000841.01.T01:intron | 55.0% | |
GGTGCCCGATCATACATGGA+TGG | - | Chr1:11925813-11925832 | MsG0180000841.01.T01:intron | 55.0% | |
TGCCACACTCCCTAAAGGTC+AGG | - | Chr1:11929198-11929217 | MsG0180000841.01.T01:CDS | 55.0% | |
! | GGAATGTGTCATTGGCACGG+TGG | - | Chr1:11925834-11925853 | MsG0180000841.01.T01:intron | 55.0% |
! | GGCCATGTTTGAAGCTGTGC+AGG | - | Chr1:11929226-11929245 | MsG0180000841.01.T01:CDS | 55.0% |
CAGTCCTGGCCGTGTGTGAT+AGG | - | Chr1:11928418-11928437 | MsG0180000841.01.T01:intron | 60.0% | |
CTATCACACACGGCCAGGAC+TGG | + | Chr1:11928420-11928439 | None:intergenic | 60.0% | |
GACTCCTATCACACACGGCC+AGG | + | Chr1:11928425-11928444 | None:intergenic | 60.0% | |
GCAGCTGCAGTTGACTGTGG+AGG | - | Chr1:11928919-11928938 | MsG0180000841.01.T01:CDS | 60.0% | |
GTCATTGGCACGGTGGAGAC+CGG | - | Chr1:11925841-11925860 | MsG0180000841.01.T01:intron | 60.0% | |
TCATTGGCACGGTGGAGACC+GGG | - | Chr1:11925842-11925861 | MsG0180000841.01.T01:intron | 60.0% | |
! | GGCCTGACCTTTAGGGAGTG+TGG | + | Chr1:11929203-11929222 | None:intergenic | 60.0% |
CATTGGCACGGTGGAGACCG+GGG | - | Chr1:11925843-11925862 | MsG0180000841.01.T01:intron | 65.0% | |
CTCCCTAAAGGTCAGGCCGG+TGG | - | Chr1:11929205-11929224 | MsG0180000841.01.T01:CDS | 65.0% | |
GGCCACCGGCCTGACCTTTA+GGG | + | Chr1:11929210-11929229 | None:intergenic | 65.0% | |
TGGCCACCGGCCTGACCTTT+AGG | + | Chr1:11929211-11929230 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 11925075 | 11929483 | 11925075 | ID=MsG0180000841.01;Name=MsG0180000841.01 |
Chr1 | mRNA | 11925075 | 11929483 | 11925075 | ID=MsG0180000841.01.T01;Parent=MsG0180000841.01;Name=MsG0180000841.01.T01;_AED=0.54;_eAED=0.54;_QI=0|0|0|0.6|1|1|5|0|504 |
Chr1 | exon | 11928430 | 11929483 | 11928430 | ID=MsG0180000841.01.T01:exon:454;Parent=MsG0180000841.01.T01 |
Chr1 | exon | 11926384 | 11926468 | 11926384 | ID=MsG0180000841.01.T01:exon:455;Parent=MsG0180000841.01.T01 |
Chr1 | exon | 11925617 | 11925751 | 11925617 | ID=MsG0180000841.01.T01:exon:456;Parent=MsG0180000841.01.T01 |
Chr1 | exon | 11925258 | 11925398 | 11925258 | ID=MsG0180000841.01.T01:exon:457;Parent=MsG0180000841.01.T01 |
Chr1 | exon | 11925075 | 11925174 | 11925075 | ID=MsG0180000841.01.T01:exon:458;Parent=MsG0180000841.01.T01 |
Chr1 | CDS | 11928430 | 11929483 | 11928430 | ID=MsG0180000841.01.T01:cds;Parent=MsG0180000841.01.T01 |
Chr1 | CDS | 11926384 | 11926468 | 11926384 | ID=MsG0180000841.01.T01:cds;Parent=MsG0180000841.01.T01 |
Chr1 | CDS | 11925617 | 11925751 | 11925617 | ID=MsG0180000841.01.T01:cds;Parent=MsG0180000841.01.T01 |
Chr1 | CDS | 11925258 | 11925398 | 11925258 | ID=MsG0180000841.01.T01:cds;Parent=MsG0180000841.01.T01 |
Chr1 | CDS | 11925075 | 11925174 | 11925075 | ID=MsG0180000841.01.T01:cds;Parent=MsG0180000841.01.T01 |
Gene Sequence |
Protein sequence |