AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043370.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043370.01.T01 MTR_8g033090 88.537 410 39 2 1 402 1 410 0.0 746
MsG0880043370.01.T01 MTR_8g033110 80.357 392 74 3 1 389 1 392 0.0 629
MsG0880043370.01.T01 MTR_8g018110 70.602 415 89 8 1 402 1 395 0.0 548
MsG0880043370.01.T01 MTR_1g053510 53.453 391 169 5 2 389 3 383 5.38e-132 389
MsG0880043370.01.T01 MTR_8g033140 52.709 406 163 8 1 389 1 394 7.77e-129 382
MsG0880043370.01.T01 MTR_8g032980 50.962 416 179 9 1 399 1 408 7.84e-122 364
MsG0880043370.01.T01 MTR_8g046310 46.154 403 155 14 1 389 1 355 2.66e-98 302
MsG0880043370.01.T01 MTR_8g046220 44.769 411 177 16 1 389 1 383 3.75e-94 292
MsG0880043370.01.T01 MTR_8g046200 43.632 424 179 15 1 389 1 399 9.75e-94 292
MsG0880043370.01.T01 MTR_8g033000 44.293 368 170 11 51 397 1 354 5.79e-83 262
MsG0880043370.01.T01 MTR_0129s0070 40.887 406 190 13 1 389 1 373 2.35e-75 243
MsG0880043370.01.T01 MTR_8g063440 41.439 403 179 17 1 389 1 360 1.30e-72 236
MsG0880043370.01.T01 MTR_2g038680 41.849 411 188 17 2 389 5 387 4.09e-71 233
MsG0880043370.01.T01 MTR_1g007410 40.338 414 177 17 1 387 11 381 6.45e-71 232
MsG0880043370.01.T01 MTR_0129s0120 40.204 393 188 12 11 389 14 373 7.84e-71 231
MsG0880043370.01.T01 MTR_0129s0050 39.500 400 196 14 11 389 11 385 6.13e-70 229
MsG0880043370.01.T01 MTR_5g097220 39.206 403 182 14 14 387 13 381 2.09e-69 228
MsG0880043370.01.T01 MTR_6g086825 38.235 442 191 16 2 402 58 458 2.25e-69 229
MsG0880043370.01.T01 MTR_6g090180 38.875 409 194 12 3 387 37 413 1.78e-68 226
MsG0880043370.01.T01 MTR_5g096630 39.036 415 173 15 14 389 18 391 9.35e-68 224
MsG0880043370.01.T01 MTR_8g464770 37.811 402 192 14 1 389 1 357 1.09e-67 223
MsG0880043370.01.T01 MTR_3g011120 39.698 398 190 14 1 389 1 357 5.01e-66 218
MsG0880043370.01.T01 MTR_2g021770 37.722 395 205 13 14 389 12 384 3.94e-65 217
MsG0880043370.01.T01 MTR_4g102410 39.467 413 192 21 1 389 49 427 8.77e-65 217
MsG0880043370.01.T01 MTR_1g007450 39.066 407 204 15 1 393 1 377 1.63e-64 216
MsG0880043370.01.T01 MTR_4g055820 40.519 385 186 14 1 368 1 359 2.36e-64 213
MsG0880043370.01.T01 MTR_7g017170 36.364 407 213 13 14 406 18 392 1.06e-63 213
MsG0880043370.01.T01 MTR_4g028660 36.131 429 207 14 2 401 4 394 2.77e-63 212
MsG0880043370.01.T01 MTR_4g027450 36.131 429 207 14 2 401 4 394 2.77e-63 212
MsG0880043370.01.T01 MTR_4g028510 35.581 430 203 15 2 397 4 393 7.57e-63 212
MsG0880043370.01.T01 MTR_2g021950 36.946 406 205 13 2 389 4 376 3.09e-62 209
MsG0880043370.01.T01 MTR_0054s0090 37.529 437 199 18 2 402 6 404 3.79e-62 209
MsG0880043370.01.T01 MTR_7g017130 36.951 387 199 12 14 387 18 372 4.07e-62 209
MsG0880043370.01.T01 MTR_7g069550 35.507 414 226 13 1 400 1 387 7.82e-62 208
MsG0880043370.01.T01 MTR_8g467670 37.662 385 195 9 9 387 9 354 1.08e-61 207
MsG0880043370.01.T01 MTR_5g059430 36.957 414 197 14 10 390 22 404 1.44e-61 208
MsG0880043370.01.T01 MTR_7g017040 36.341 410 185 11 12 391 14 377 1.64e-61 207
MsG0880043370.01.T01 MTR_6g079810 35.280 428 210 15 3 399 59 450 2.07e-61 209
MsG0880043370.01.T01 MTR_6g080680 38.462 416 172 14 3 387 8 370 2.30e-61 207
MsG0880043370.01.T01 MTR_6g079770 36.973 403 202 14 12 387 15 392 3.18e-61 207
MsG0880043370.01.T01 MTR_5g069390 38.631 409 188 18 10 390 22 395 4.14e-61 209
MsG0880043370.01.T01 MTR_0054s0100 36.866 434 208 17 2 402 6 406 5.28e-61 206
MsG0880043370.01.T01 MTR_5g037680 36.855 407 183 14 10 389 4 363 1.97e-60 206
MsG0880043370.01.T01 MTR_2g034700 36.658 401 194 10 1 389 1 353 2.52e-60 203
MsG0880043370.01.T01 MTR_0134s0060 36.893 412 207 15 3 387 2 387 4.15e-60 204
MsG0880043370.01.T01 MTR_4g028680 34.383 413 213 11 2 392 4 380 5.70e-60 203
MsG0880043370.01.T01 MTR_2g104340 38.710 403 204 15 1 389 1 374 6.96e-60 203
MsG0880043370.01.T01 MTR_2g065860 34.928 418 212 12 1 400 1 376 1.74e-59 201
MsG0880043370.01.T01 MTR_5g097680 36.427 431 202 15 12 397 15 418 2.06e-58 200
MsG0880043370.01.T01 MTR_0831s0010 37.221 403 196 15 2 389 38 398 3.20e-58 199
MsG0880043370.01.T01 MTR_5g024260 37.170 417 194 15 7 395 15 391 3.74e-58 199
MsG0880043370.01.T01 MTR_2g022000 37.990 408 198 16 11 389 13 394 7.47e-58 198
MsG0880043370.01.T01 MTR_4g117550 35.661 401 172 15 11 389 14 350 1.67e-57 196
MsG0880043370.01.T01 MTR_5g074850 36.124 418 204 14 1 391 22 403 2.27e-57 206
MsG0880043370.01.T01 MTR_2g021800 36.150 426 194 15 4 389 8 395 3.74e-57 196
MsG0880043370.01.T01 MTR_4g028750 34.963 409 204 13 2 387 4 373 1.89e-56 194
MsG0880043370.01.T01 MTR_5g092850 34.048 420 209 11 3 395 5 383 2.27e-56 194
MsG0880043370.01.T01 MTR_5g072060 38.875 391 189 16 9 390 1 350 5.39e-56 198
MsG0880043370.01.T01 MTR_6g478230 35.845 438 195 17 3 402 16 405 5.54e-56 193
MsG0880043370.01.T01 MTR_8g064890 36.609 407 204 15 7 399 9 375 9.41e-56 191
MsG0880043370.01.T01 MTR_2g065840 35.381 407 202 13 1 389 1 364 1.25e-55 191
MsG0880043370.01.T01 MTR_5g097330 36.650 412 201 16 1 389 5 379 1.48e-55 191
MsG0880043370.01.T01 MTR_5g096910 34.913 401 206 9 3 387 6 367 2.67e-55 191
MsG0880043370.01.T01 MTR_8g012090 37.374 396 165 12 2 381 6 334 3.40e-55 188
MsG0880043370.01.T01 MTR_2g064950 35.109 413 210 14 12 404 8 382 4.01e-55 190
MsG0880043370.01.T01 MTR_8g041270 37.965 403 194 18 12 389 13 384 6.17e-55 190
MsG0880043370.01.T01 MTR_4g130330 34.491 403 199 15 10 387 3 365 1.39e-54 189
MsG0880043370.01.T01 MTR_6g461660 36.247 389 201 12 13 386 18 374 3.10e-54 188
MsG0880043370.01.T01 MTR_4g014370 35.377 424 198 15 3 389 2 386 4.64e-54 187
MsG0880043370.01.T01 MTR_7g079640 35.385 390 191 14 13 389 12 353 1.57e-52 183
MsG0880043370.01.T01 MTR_8g039500 35.516 397 189 15 1 381 1 346 3.67e-52 181
MsG0880043370.01.T01 MTR_1g007430 38.192 343 170 12 25 360 7 314 9.42e-52 179
MsG0880043370.01.T01 MTR_5g097350 35.075 402 184 17 23 399 25 374 3.38e-51 179
MsG0880043370.01.T01 MTR_8g035690 40.942 276 131 9 147 402 38 301 5.07e-51 176
MsG0880043370.01.T01 MTR_5g022850 34.080 402 157 14 12 389 14 331 5.70e-51 178
MsG0880043370.01.T01 MTR_5g075370 35.381 407 199 14 10 387 4 375 6.59e-51 186
MsG0880043370.01.T01 MTR_8g013000 36.461 373 192 14 13 369 9 352 1.17e-50 179
MsG0880043370.01.T01 MTR_2g066200 34.236 406 205 13 1 387 1 363 1.56e-50 177
MsG0880043370.01.T01 MTR_2g066170 35.663 415 189 17 1 389 1 363 1.69e-50 177
MsG0880043370.01.T01 MTR_2g104280 34.293 417 212 17 1 389 1 383 2.65e-49 175
MsG0880043370.01.T01 MTR_6g090250 33.412 425 210 15 6 387 5 399 1.31e-48 173
MsG0880043370.01.T01 MTR_5g091140 35.484 403 195 17 1 386 36 390 7.74e-48 171
MsG0880043370.01.T01 MTR_8g063330 36.458 384 191 17 1 367 1 348 1.50e-47 172
MsG0880043370.01.T01 MTR_1g047080 35.860 343 133 10 51 389 1 260 1.72e-46 164
MsG0880043370.01.T01 MTR_7g016930 36.257 342 160 9 11 344 13 304 2.10e-45 162
MsG0880043370.01.T01 MTR_2g066150 34.146 410 198 17 1 400 1 348 3.16e-45 162
MsG0880043370.01.T01 MTR_1g098180 33.810 420 181 16 1 395 1 348 5.06e-43 157
MsG0880043370.01.T01 MTR_5g096900 36.648 352 150 13 11 336 9 313 1.55e-42 154
MsG0880043370.01.T01 MTR_7g111700 34.351 393 179 13 13 389 14 343 5.22e-42 154
MsG0880043370.01.T01 MTR_6g070880 41.270 252 114 9 11 248 29 260 1.98e-41 149
MsG0880043370.01.T01 MTR_6g071420 41.270 252 114 9 11 248 29 260 1.98e-41 149
MsG0880043370.01.T01 MTR_5g064700 32.474 388 190 16 53 397 1 359 4.82e-41 151
MsG0880043370.01.T01 MTR_8g063370 31.865 386 200 17 18 387 28 366 5.59e-41 152
MsG0880043370.01.T01 MTR_5g074800 33.062 369 196 14 53 403 1 336 7.69e-41 150
MsG0880043370.01.T01 MTR_5g092860 30.886 395 182 13 32 394 20 355 3.93e-40 149
MsG0880043370.01.T01 MTR_5g097820 37.324 284 130 12 7 272 16 269 9.24e-40 145
MsG0880043370.01.T01 MTR_5g043605 33.827 405 150 16 12 399 23 326 6.04e-39 145
MsG0880043370.01.T01 MTR_6g078010 33.505 388 161 16 51 400 1 329 1.17e-37 142
MsG0880043370.01.T01 MTR_1g050308 30.750 400 181 16 1 394 23 332 1.52e-36 139
MsG0880043370.01.T01 MTR_8g063310 31.378 392 216 19 11 387 19 372 5.12e-36 139
MsG0880043370.01.T01 MTR_5g094350 33.441 311 142 10 1 285 1 272 9.39e-35 132
MsG0880043370.01.T01 MTR_4g007940 32.749 342 181 14 68 389 7 319 1.05e-34 133
MsG0880043370.01.T01 MTR_8g073570 44.134 179 90 6 1 178 1 170 2.17e-34 127
MsG0880043370.01.T01 MTR_6g079790 34.043 329 162 13 99 400 3 303 2.54e-34 132
MsG0880043370.01.T01 MTR_6g465360 38.153 249 115 11 2 228 45 276 4.73e-34 130
MsG0880043370.01.T01 MTR_7g104710 33.903 351 148 15 2 332 6 292 7.77e-34 130
MsG0880043370.01.T01 MTR_8g064790 44.828 174 89 5 9 179 10 179 8.55e-34 131
MsG0880043370.01.T01 MTR_8g064790 31.373 153 85 3 254 400 187 325 1.41e-11 66.2
MsG0880043370.01.T01 MTR_5g037190 39.572 187 110 3 2 186 5 190 2.24e-32 124
MsG0880043370.01.T01 MTR_6g087620 31.861 317 145 12 91 391 6 267 8.32e-32 124
MsG0880043370.01.T01 MTR_5g086590 37.255 255 118 10 136 384 13 231 9.54e-32 122
MsG0880043370.01.T01 MTR_1g050312 34.700 317 144 13 86 394 16 277 4.02e-31 122
MsG0880043370.01.T01 MTR_1g076810 34.962 266 124 9 1 257 6 231 2.19e-30 125
MsG0880043370.01.T01 MTR_5g097650 43.226 155 74 4 5 159 13 153 2.73e-30 116
MsG0880043370.01.T01 MTR_5g068490 34.884 301 129 13 99 389 12 255 3.43e-30 119
MsG0880043370.01.T01 MTR_6g004450 33.681 288 131 12 116 387 1 244 1.67e-29 117
MsG0880043370.01.T01 MTR_5g076490 33.791 364 164 18 51 389 1 312 5.14e-29 117
MsG0880043370.01.T01 MTR_8g063350 29.426 418 177 18 12 403 12 337 5.19e-29 117
MsG0880043370.01.T01 MTR_2g104260 36.364 253 125 10 1 240 1 230 1.17e-27 112
MsG0880043370.01.T01 MTR_3g047580 38.816 152 66 3 1 150 1 127 2.61e-27 107
MsG0880043370.01.T01 MTR_3g019290 35.211 213 93 6 1 207 1 174 1.13e-25 103
MsG0880043370.01.T01 MTR_6g090260 38.953 172 86 5 224 385 73 235 2.47e-25 105
MsG0880043370.01.T01 MTR_6g090260 61.667 60 23 0 1 60 7 66 3.44e-15 76.3
MsG0880043370.01.T01 MTR_8g036970 43.972 141 73 4 18 154 2 140 3.03e-25 107
MsG0880043370.01.T01 MTR_8g036970 31.250 240 138 7 158 389 81 301 2.09e-17 84.3
MsG0880043370.01.T01 MTR_6g009350 36.486 222 92 9 168 375 9 195 3.05e-25 103
MsG0880043370.01.T01 MTR_2g021920 35.745 235 118 8 168 389 38 252 3.91e-25 105
MsG0880043370.01.T01 MTR_7g023800 29.226 349 170 11 53 387 1 286 1.58e-24 104
MsG0880043370.01.T01 MTR_5g096070 39.286 168 68 4 11 175 23 159 5.72e-24 98.6
MsG0880043370.01.T01 MTR_5g097850 42.012 169 82 6 231 390 63 224 9.46e-24 100
MsG0880043370.01.T01 MTR_1g115205 33.455 275 114 12 2 261 14 234 1.32e-22 97.4
MsG0880043370.01.T01 MTR_4g014370 45.185 135 60 6 3 130 13 140 3.19e-22 98.2
MsG0880043370.01.T01 MTR_4g014370 33.529 170 106 4 222 389 150 314 5.93e-16 79.7
MsG0880043370.01.T01 MTR_3g018750 30.579 242 119 8 168 389 4 216 5.07e-22 95.5
MsG0880043370.01.T01 MTR_5g023970 36.571 175 91 6 224 389 9 172 5.65e-22 94.0
MsG0880043370.01.T01 MTR_2g031720 25.167 449 243 18 9 427 1 386 2.08e-21 96.7
MsG0880043370.01.T01 MTR_7g019250 30.233 258 114 10 150 390 206 414 2.66e-20 94.0
MsG0880043370.01.T01 MTR_2g028140 25.874 429 203 20 14 390 5 370 1.04e-19 92.0
MsG0880043370.01.T01 MTR_6g079730 53.750 80 36 1 309 387 46 125 1.43e-19 85.9
MsG0880043370.01.T01 MTR_3g010430 24.041 391 214 17 14 387 36 360 1.65e-19 91.3
MsG0880043370.01.T01 MTR_4g016000 32.906 234 106 9 141 365 2 193 2.90e-19 87.0
MsG0880043370.01.T01 MTR_1g068835 23.750 400 223 15 12 390 2 340 3.32e-19 89.7
MsG0880043370.01.T01 MTR_3g030620 40.650 123 66 4 268 389 42 158 4.58e-19 85.5
MsG0880043370.01.T01 MTR_2g426090 23.656 465 258 17 17 452 9 405 1.05e-18 88.6
MsG0880043370.01.T01 MTR_2g028110 24.265 408 209 16 14 390 4 342 1.08e-18 88.6
MsG0880043370.01.T01 MTR_2g425980 24.938 401 221 16 14 384 5 355 3.01e-18 87.4
MsG0880043370.01.T01 MTR_1g068860 24.384 406 211 16 14 390 4 342 3.07e-18 87.0
MsG0880043370.01.T01 MTR_2g028160 23.150 419 226 14 14 388 5 371 4.65e-18 87.0
MsG0880043370.01.T01 MTR_2g031640 23.325 403 219 14 14 390 6 344 7.67e-18 85.9
MsG0880043370.01.T01 MTR_2g028130 24.645 422 218 17 14 390 5 371 7.80e-18 86.3
MsG0880043370.01.T01 MTR_0115s0020 27.520 367 198 15 8 350 4 326 1.14e-17 85.5
MsG0880043370.01.T01 MTR_3g083010 21.780 427 229 17 14 390 6 377 5.13e-17 83.6
MsG0880043370.01.T01 MTR_5g049560 35.811 148 80 3 51 183 1 148 6.10e-17 81.3
MsG0880043370.01.T01 MTR_5g066420 39.516 124 64 3 268 389 23 137 6.92e-17 78.2
MsG0880043370.01.T01 MTR_5g091150 30.924 249 83 9 99 322 3 187 1.12e-16 79.0
MsG0880043370.01.T01 MTR_2g024100 23.171 410 228 14 16 390 9 366 1.47e-16 82.0
MsG0880043370.01.T01 MTR_2g031680 24.069 403 223 15 9 390 1 341 2.40e-16 81.3
MsG0880043370.01.T01 MTR_2g047832 26.781 351 196 15 13 348 28 332 3.31e-16 81.3
MsG0880043370.01.T01 MTR_2g426060 23.020 404 224 15 14 384 6 355 3.74e-16 80.9
MsG0880043370.01.T01 MTR_4g133170 22.983 409 224 19 14 399 4 344 1.69e-15 79.0
MsG0880043370.01.T01 MTR_0667s0010 22.356 416 231 16 9 387 1 361 2.69e-15 78.2
MsG0880043370.01.T01 MTR_2g024110 21.845 412 220 16 14 390 4 348 3.54e-15 77.8
MsG0880043370.01.T01 MTR_2g426070 22.573 412 227 14 15 390 7 362 6.50e-15 77.0
MsG0880043370.01.T01 MTR_2g021150 23.913 368 196 14 1 348 1 304 6.74e-15 76.6
MsG0880043370.01.T01 MTR_5g097540 34.302 172 95 5 225 391 96 254 1.07e-14 75.1
MsG0880043370.01.T01 MTR_5g097660 47.059 85 43 2 307 389 13 97 1.24e-14 70.9
MsG0880043370.01.T01 MTR_2g026010 24.691 405 215 17 14 390 4 346 1.30e-14 76.3
MsG0880043370.01.T01 MTR_3g036335 24.412 340 194 13 14 346 41 324 3.06e-14 75.1
MsG0880043370.01.T01 MTR_2g021050 23.227 409 204 17 14 390 5 335 3.54e-14 74.7
MsG0880043370.01.T01 MTR_4g070550 23.150 419 218 14 14 388 5 363 3.80e-14 74.7
MsG0880043370.01.T01 MTR_5g036250 46.316 95 45 2 309 397 8 102 5.32e-14 70.9
MsG0880043370.01.T01 MTR_5g048160 24.706 425 225 19 14 397 4 374 5.76e-14 73.9
MsG0880043370.01.T01 MTR_2g021860 39.326 89 53 1 99 186 16 104 1.01e-13 68.9
MsG0880043370.01.T01 MTR_8g099460 23.601 411 222 15 11 390 2 351 1.13e-13 73.2
MsG0880043370.01.T01 MTR_3g014570 23.499 383 210 13 1 364 16 334 1.56e-13 72.8
MsG0880043370.01.T01 MTR_2g046920 24.854 342 194 13 13 348 23 307 3.84e-13 71.2
MsG0880043370.01.T01 MTR_8g090195 60.656 61 23 1 327 386 53 113 3.92e-13 66.2
MsG0880043370.01.T01 MTR_8g090195 54.545 55 19 1 141 195 10 58 3.88e-12 63.5
MsG0880043370.01.T01 MTR_1g094210 24.507 355 169 16 14 348 57 332 4.01e-13 71.6
MsG0880043370.01.T01 MTR_1g094210 24.507 355 169 16 14 348 57 332 4.09e-13 71.6
MsG0880043370.01.T01 MTR_4g030830 24.528 371 185 14 12 348 7 316 6.91e-13 70.9
MsG0880043370.01.T01 MTR_4g019990 25.068 367 197 16 9 348 1 316 1.01e-12 70.1
MsG0880043370.01.T01 MTR_7g070440 25.594 379 217 17 12 372 5 336 1.63e-12 69.3
MsG0880043370.01.T01 MTR_5g096920 34.426 122 67 3 268 387 17 127 2.61e-12 65.1
MsG0880043370.01.T01 MTR_3g036290 26.301 346 172 16 14 349 22 294 2.72e-12 68.6
MsG0880043370.01.T01 MTR_3g010520 23.677 359 181 13 2 348 13 290 4.58e-12 68.2
MsG0880043370.01.T01 MTR_2g046900 29.070 172 112 4 13 184 27 188 5.54e-12 67.8
MsG0880043370.01.T01 MTR_8g041440 49.206 63 32 0 11 73 12 74 1.10e-11 62.4
MsG0880043370.01.T01 MTR_6g027910 23.885 381 204 16 17 374 12 329 1.29e-11 66.6
MsG0880043370.01.T01 MTR_3g006530 26.068 234 127 8 14 240 40 234 1.71e-11 66.6
MsG0880043370.01.T01 MTR_6g087660 55.932 59 26 0 2 60 6 64 2.17e-11 63.5
MsG0880043370.01.T01 MTR_3g034160 24.377 361 185 13 13 348 8 305 2.99e-11 65.5
MsG0880043370.01.T01 MTR_3g013770 24.860 358 193 14 14 356 33 329 3.57e-11 65.5
MsG0880043370.01.T01 MTR_7g101200 31.687 243 105 13 136 369 38 228 6.58e-11 62.8
MsG0880043370.01.T01 MTR_3g058470 23.851 348 171 13 14 348 37 303 7.83e-11 64.3
MsG0880043370.01.T01 MTR_7g017150 37.121 132 64 4 225 348 81 201 8.93e-11 63.2
MsG0880043370.01.T01 MTR_7g066100 24.228 421 219 18 13 389 10 374 9.37e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 110 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTTAGGTATTGAGATTT+TGG 0.118437 8:+23784202 MsG0880043370.01.T01:CDS
CAGAAAAGCATAACCATTTA+TGG 0.134965 8:+23785940 MsG0880043370.01.T01:CDS
TCCTGCTACTAAAGAATTTA+AGG 0.143382 8:+23784298 MsG0880043370.01.T01:CDS
AATCAGGGCTTTCAAATAAA+AGG 0.180175 8:-23784001 None:intergenic
AGCTGGTCTTTGAAGGTAAT+TGG 0.198013 8:+23785907 MsG0880043370.01.T01:CDS
TGGATGATGATAATGAATTT+TGG 0.210713 8:+23785991 MsG0880043370.01.T01:CDS
GAAAACTTAGTAGTGTTAAA+TGG 0.212934 8:+23786271 MsG0880043370.01.T01:CDS
TGGAGATGAACGACCCTTTC+TGG 0.229616 8:+23784531 MsG0880043370.01.T01:CDS
CCTTTGACTTTGAAGGTAAC+TGG 0.233605 8:+23784435 MsG0880043370.01.T01:CDS
TACCCTCGGTTGGCTTAAAA+AGG 0.241865 8:+23784723 MsG0880043370.01.T01:CDS
TGGATTATGATCATACTTTC+TGG 0.251037 8:+23784495 MsG0880043370.01.T01:CDS
CCATTGAGATGCGTTTAAAT+TGG 0.262669 8:+23784597 MsG0880043370.01.T01:CDS
AGCTTTATATTCTTCATAAA+AGG 0.265681 8:+23784962 MsG0880043370.01.T01:CDS
CCTTGCAAAATGCGTCCTTT+TGG 0.289489 8:+23784926 MsG0880043370.01.T01:CDS
GAGGGATTTAAGAGGCAATT+TGG 0.295975 8:-23783946 None:intergenic
CCTTGATCTCCTCAATCCTT+TGG 0.310711 8:-23785018 None:intergenic
AAAACTTGACACGTCAATAT+TGG 0.320845 8:-23784834 None:intergenic
CATTATCCCTTTGACTTTGA+AGG 0.326200 8:+23784428 MsG0880043370.01.T01:CDS
ATTCACCCATCTCCCATAAA+TGG 0.328524 8:-23785953 None:intergenic
CGAAACATGTTCATAAAATC+AGG 0.340925 8:-23784017 None:intergenic
CCTAAGTCATCTTCATGAAA+TGG 0.379823 8:-23784188 None:intergenic
GTTGTGTTTGGATATGAAAT+TGG 0.379919 8:-23784042 None:intergenic
ATGGGAGATGGGTGAATTGT+TGG 0.380278 8:+23785959 MsG0880043370.01.T01:CDS
GCTGGTCTTTGAAGGTAATT+GGG 0.382158 8:+23785908 MsG0880043370.01.T01:CDS
AAGACACCTCCTCTGGCATT+TGG 0.383898 8:+23784362 MsG0880043370.01.T01:CDS
CTTGATCTCCTCAATCCTTT+GGG 0.395694 8:-23785017 None:intergenic
TTCACTGTCCTCGTTGTGTT+TGG 0.397074 8:-23784054 None:intergenic
TCTTTGAAGGTAATTGGGTT+TGG 0.398375 8:+23785913 MsG0880043370.01.T01:CDS
AACAAATTTACCCTCTGAAT+CGG 0.405364 8:+23786219 MsG0880043370.01.T01:CDS
CCCAAAATCCATATGTGAAA+AGG 0.422855 8:-23786331 None:intergenic
AGAAAAGCATAACCATTTAT+GGG 0.427667 8:+23785941 MsG0880043370.01.T01:CDS
TCAAGGATTATGCGTCCTAT+TGG 0.436206 8:+23786365 MsG0880043370.01.T01:CDS
ATAGAGAAAGCAAGGTCGTT+AGG 0.437161 8:-23783918 None:intergenic
GCATAACCATTTATGGGAGA+TGG 0.439110 8:+23785947 MsG0880043370.01.T01:CDS
AAAACTTAGTAGTGTTAAAT+GGG 0.439474 8:+23786272 MsG0880043370.01.T01:CDS
CTCTTCTTCCCTGCTCCAAT+AGG 0.439871 8:-23786380 None:intergenic
GCCATTGTTTAGAACTTGAC+AGG 0.445307 8:+23784654 MsG0880043370.01.T01:CDS
CTGGGTTAATGTACCTGATA+AGG 0.445849 8:+23784454 MsG0880043370.01.T01:CDS
ACCTTAAATTCTTTAGTAGC+AGG 0.446739 8:-23784299 None:intergenic
CAATGTTGTCATACGGTTGA+AGG 0.446843 8:-23784334 None:intergenic
GGATTATGATCATACTTTCT+GGG 0.448611 8:+23784496 MsG0880043370.01.T01:CDS
TATCCTGAGCTGGTCTTTGA+AGG 0.450820 8:+23785900 MsG0880043370.01.T01:CDS
AAACACACGTCTCATCCTAA+TGG 0.464563 8:+23784076 MsG0880043370.01.T01:CDS
GGAGATGAACGACCCTTTCT+GGG 0.475232 8:+23784532 MsG0880043370.01.T01:CDS
GCTACAACCTTACCCTCGGT+TGG 0.476145 8:+23784713 MsG0880043370.01.T01:CDS
GACATGACTATAAGTTGATC+CGG 0.478478 8:+23784399 MsG0880043370.01.T01:CDS
TAGCTCTTCAGCCTGAATCT+AGG 0.479126 8:-23784776 None:intergenic
AACACATGTGAATCGTTTGA+GGG 0.480732 8:-23783964 None:intergenic
CTGGCGAGAAGTTGGAGGAT+GGG 0.481778 8:+23784144 MsG0880043370.01.T01:CDS
GTGCATAAGGTGTAGGGAAA+GGG 0.483666 8:-23784116 None:intergenic
CTTTGACTTTGAAGGTAACT+GGG 0.485542 8:+23784436 MsG0880043370.01.T01:CDS
TTGTCATACGGTTGAAGGCT+AGG 0.485649 8:-23784329 None:intergenic
CCAGTTACCTTCAAAGTCAA+AGG 0.485955 8:-23784435 None:intergenic
AGCTACTTAGCAGTGATACA+TGG 0.486374 8:+23784794 MsG0880043370.01.T01:CDS
GAACACATGTGAATCGTTTG+AGG 0.487579 8:-23783965 None:intergenic
CAAAGGGATAATGCGCAATC+CGG 0.489884 8:-23784418 None:intergenic
AATCGTTTGAGGGATTTAAG+AGG 0.492656 8:-23783954 None:intergenic
GCCTCAAAAGTAACCCTTGG+AGG 0.493833 8:+23784564 MsG0880043370.01.T01:CDS
TTTGGGTGAATTTGGTGTCA+AGG 0.495598 8:+23786348 MsG0880043370.01.T01:CDS
CAAAATTCATTCAAGTTCAC+CGG 0.496169 8:-23784632 None:intergenic
CTCGCCAGAAAATGTGCATA+AGG 0.496550 8:-23784129 None:intergenic
CCATTTCATGAAGATGACTT+AGG 0.498237 8:+23784188 MsG0880043370.01.T01:CDS
GGCTGCTGCAACACATAAGC+TGG 0.498314 8:+23783878 MsG0880043370.01.T01:CDS
CTCTTGATGCCTATCCCAAA+AGG 0.500008 8:-23784941 None:intergenic
TGAATTGTTGGATGAGATGT+TGG 0.500306 8:+23785971 MsG0880043370.01.T01:CDS
TTACCTTCAAAGACCAGCTC+AGG 0.500925 8:-23785903 None:intergenic
ATCAGGGCTTTCAAATAAAA+GGG 0.502297 8:-23784000 None:intergenic
TGGCGAGAAGTTGGAGGATG+GGG 0.504010 8:+23784145 MsG0880043370.01.T01:CDS
ATTATGCGTCCTATTGGAGC+AGG 0.507327 8:+23786371 MsG0880043370.01.T01:CDS
CCAAAGGATTGAGGAGATCA+AGG 0.507753 8:+23785018 MsG0880043370.01.T01:CDS
CATAACCATTTATGGGAGAT+GGG 0.520280 8:+23785948 MsG0880043370.01.T01:CDS
TGAGGTTAAGACACCTCCTC+TGG 0.522388 8:+23784355 MsG0880043370.01.T01:CDS
TTTAAGTACCCAAAGGATTG+AGG 0.524343 8:+23785009 MsG0880043370.01.T01:CDS
CCAATTTAAACGCATCTCAA+TGG 0.528276 8:-23784597 None:intergenic
AGGCTATATATCTCCCAGAA+AGG 0.531723 8:-23784545 None:intergenic
ATAGCCTCAAAAGTAACCCT+TGG 0.537169 8:+23784561 MsG0880043370.01.T01:CDS
AGAAAATGTGCATAAGGTGT+AGG 0.539188 8:-23784123 None:intergenic
CTTTGCTACAACCTTACCCT+CGG 0.541784 8:+23784709 MsG0880043370.01.T01:CDS
TCTGGCGAGAAGTTGGAGGA+TGG 0.543525 8:+23784143 MsG0880043370.01.T01:CDS
GGCTATATATCTCCCAGAAA+GGG 0.544323 8:-23784544 None:intergenic
TGTGCATAAGGTGTAGGGAA+AGG 0.550054 8:-23784117 None:intergenic
AAGGTGATGAGGAGATAGCT+TGG 0.551726 8:+23784981 MsG0880043370.01.T01:CDS
TTAACCTCAATGTTGTCATA+CGG 0.554316 8:-23784341 None:intergenic
CAGTTACCTTCAAAGTCAAA+GGG 0.557505 8:-23784434 None:intergenic
AAATTGGCTAGATAGCTATC+CGG 0.557988 8:+23784613 MsG0880043370.01.T01:CDS
AATTGCTCAATATCCTGAGC+TGG 0.560349 8:+23785890 MsG0880043370.01.T01:CDS
GAAAATGTGCATAAGGTGTA+GGG 0.560970 8:-23784122 None:intergenic
TCATCTTCATGAAATGGAGG+TGG 0.567538 8:-23784182 None:intergenic
TCCTGTCAAGTTCTAAACAA+TGG 0.580076 8:-23784655 None:intergenic
ATTCTTCATAAAAGGTGATG+AGG 0.582548 8:+23784970 MsG0880043370.01.T01:CDS
AGGTAGTATATCCGATTCAG+AGG 0.588120 8:-23786230 None:intergenic
TGGAAAGAATAGAGAAAGCA+AGG 0.592233 8:-23783926 None:intergenic
TTGTGTCATGGAAAATGCCT+TGG 0.599593 8:-23784259 None:intergenic
AACTCGGTGTTAAAGAATCG+TGG 0.610378 8:+23784879 MsG0880043370.01.T01:CDS
GGTATGATTTAAGTACCCAA+AGG 0.617538 8:+23785002 MsG0880043370.01.T01:CDS
GCTACTTAGCAGTGATACAT+GGG 0.618099 8:+23784795 MsG0880043370.01.T01:CDS
ACCTCCTCTTACACTACGAG+AGG 0.620021 8:+23786249 MsG0880043370.01.T01:CDS
TCCTCTCGTAGTGTAAGAGG+AGG 0.620087 8:-23786250 None:intergenic
TTTCTGGGATAGACGAGTGG+TGG 0.623516 8:+23784511 MsG0880043370.01.T01:CDS
GAAACATGTTCATAAAATCA+GGG 0.635530 8:-23784016 None:intergenic
AAGTCATCTTCATGAAATGG+AGG 0.639400 8:-23784185 None:intergenic
TACTTTCTGGGATAGACGAG+TGG 0.649975 8:+23784508 MsG0880043370.01.T01:CDS
TCAACCGTATGACAACATTG+AGG 0.655011 8:+23784337 MsG0880043370.01.T01:CDS
GGCACTCTTTGTCTCTACCA+AGG 0.662855 8:+23784242 MsG0880043370.01.T01:CDS
GGTAGTATATCCGATTCAGA+GGG 0.672407 8:-23786229 None:intergenic
TTATGCGTCCTATTGGAGCA+GGG 0.678365 8:+23786372 MsG0880043370.01.T01:CDS
TCATAACCAAATGCCAGAGG+AGG 0.682360 8:-23784368 None:intergenic
TCATACGGTTGAAGGCTAGG+AGG 0.701710 8:-23784326 None:intergenic
TGATCATAACCAAATGCCAG+AGG 0.707307 8:-23784371 None:intergenic
TTTCATATCCAAACACAACG+AGG 0.734382 8:+23784046 MsG0880043370.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGAATTAATATTTAATGTAT+TGG + Chr8:23785103-23785122 MsG0880043370.01.T01:intron 15.0%
!! TTATTTATAAAATCAATGCA+GGG - Chr8:23785153-23785172 None:intergenic 15.0%
!! TTTATTTATAAAATCAATGC+AGG - Chr8:23785154-23785173 None:intergenic 15.0%
!! AAAACTTAGTAGTGTTAAAT+GGG + Chr8:23786272-23786291 MsG0880043370.01.T01:CDS 20.0%
!! AATTCAAAAACAAAACTTCA+TGG + Chr8:23785335-23785354 MsG0880043370.01.T01:intron 20.0%
!! CCAAATATATATTATTGAAG+GGG + Chr8:23785237-23785256 MsG0880043370.01.T01:intron 20.0%
!! GCCAAATATATATTATTGAA+GGG + Chr8:23785236-23785255 MsG0880043370.01.T01:intron 20.0%
!! GTTGCAAATTATAGTTTATA+AGG + Chr8:23785060-23785079 MsG0880043370.01.T01:intron 20.0%
!! TGCCAAATATATATTATTGA+AGG + Chr8:23785235-23785254 MsG0880043370.01.T01:intron 20.0%
!! TTCAATAATATATATTTGGC+AGG - Chr8:23785236-23785255 None:intergenic 20.0%
!!! AGCTTTATATTCTTCATAAA+AGG + Chr8:23784962-23784981 MsG0880043370.01.T01:CDS 20.0%
!!! ATTTGAATGAATTTTGTCAT+TGG + Chr8:23786143-23786162 MsG0880043370.01.T01:intron 20.0%
!!! TTTTATGACATATGGATTTT+GGG + Chr8:23784854-23784873 MsG0880043370.01.T01:CDS 20.0%
!!! TTTTTATGACATATGGATTT+TGG + Chr8:23784853-23784872 MsG0880043370.01.T01:CDS 20.0%
! AGTTTCTTGATTGTTCTAAT+TGG + Chr8:23785289-23785308 MsG0880043370.01.T01:intron 25.0%
! ATCACAATTATTATTCCCTT+TGG - Chr8:23785553-23785572 None:intergenic 25.0%
! CCCCTTCAATAATATATATT+TGG - Chr8:23785240-23785259 None:intergenic 25.0%
! GAAAACTTAGTAGTGTTAAA+TGG + Chr8:23786271-23786290 MsG0880043370.01.T01:CDS 25.0%
! GAAACATGTTCATAAAATCA+GGG - Chr8:23784019-23784038 None:intergenic 25.0%
! TAATATGTATGATCCTTTCT+GGG + Chr8:23786033-23786052 MsG0880043370.01.T01:intron 25.0%
! TAATTCCTTCAAAAGAAAGA+AGG - Chr8:23785090-23785109 None:intergenic 25.0%
! TAGAAAATCTCAATGAACAA+CGG + Chr8:23785720-23785739 MsG0880043370.01.T01:intron 25.0%
! TTAATATGTATGATCCTTTC+TGG + Chr8:23786032-23786051 MsG0880043370.01.T01:intron 25.0%
! TTTAGACTATGATGTAACAA+CGG + Chr8:23785743-23785762 MsG0880043370.01.T01:intron 25.0%
!! AGAAAAGCATAACCATTTAT+GGG + Chr8:23785941-23785960 MsG0880043370.01.T01:CDS 25.0%
!! ATATGTGAAAAGGAGTTTTA+AGG - Chr8:23786324-23786343 None:intergenic 25.0%
!! TCTTTCATAAGCTCATATTT+TGG - Chr8:23785177-23785196 None:intergenic 25.0%
!! TGTCAAGTTTTTATGACATA+TGG + Chr8:23784846-23784865 MsG0880043370.01.T01:CDS 25.0%
!! TTAAAACTCCTTTTCACATA+TGG + Chr8:23786323-23786342 MsG0880043370.01.T01:CDS 25.0%
!!! GGATGATGATAATGAATTTT+GGG + Chr8:23785992-23786011 MsG0880043370.01.T01:CDS 25.0%
!!! GTTTAATTTGAAAGTGATCA+TGG + Chr8:23785691-23785710 MsG0880043370.01.T01:intron 25.0%
!!! TGATAAGGATAGCTATTTTT+GGG + Chr8:23784469-23784488 MsG0880043370.01.T01:CDS 25.0%
!!! TGGATGATGATAATGAATTT+TGG + Chr8:23785991-23786010 MsG0880043370.01.T01:CDS 25.0%
AAAACTTGACACGTCAATAT+TGG - Chr8:23784837-23784856 None:intergenic 30.0%
AACAAATTTACCCTCTGAAT+CGG + Chr8:23786219-23786238 MsG0880043370.01.T01:CDS 30.0%
AATCAGGGCTTTCAAATAAA+AGG - Chr8:23784004-23784023 None:intergenic 30.0%
ACCTTAAATTCTTTAGTAGC+AGG - Chr8:23784302-23784321 None:intergenic 30.0%
ACTATTAACTCTTACTACAC+TGG + Chr8:23785669-23785688 MsG0880043370.01.T01:intron 30.0%
ATAGTCTCAAAAGTAACTCA+TGG + Chr8:23786062-23786081 MsG0880043370.01.T01:intron 30.0%
ATCAGGGCTTTCAAATAAAA+GGG - Chr8:23784003-23784022 None:intergenic 30.0%
ATGACACAAAAATTGTGTTG+TGG + Chr8:23784273-23784292 MsG0880043370.01.T01:CDS 30.0%
ATTCTTCATAAAAGGTGATG+AGG + Chr8:23784970-23784989 MsG0880043370.01.T01:CDS 30.0%
CAAAAATAGCTATCCTTATC+AGG - Chr8:23784470-23784489 None:intergenic 30.0%
CGAAACATGTTCATAAAATC+AGG - Chr8:23784020-23784039 None:intergenic 30.0%
CTAATTGGTAAATATGAAGC+TGG + Chr8:23785304-23785323 MsG0880043370.01.T01:intron 30.0%
GAGTTTCACTCTATGAAAAA+AGG + Chr8:23785639-23785658 MsG0880043370.01.T01:intron 30.0%
GGAATAATAATTGTGATCAG+TGG + Chr8:23785556-23785575 MsG0880043370.01.T01:intron 30.0%
GGATTATGATCATACTTTCT+GGG + Chr8:23784496-23784515 MsG0880043370.01.T01:CDS 30.0%
GTTGTGTTTGGATATGAAAT+TGG - Chr8:23784045-23784064 None:intergenic 30.0%
TCCTGCTACTAAAGAATTTA+AGG + Chr8:23784298-23784317 MsG0880043370.01.T01:CDS 30.0%
TGGATTATGATCATACTTTC+TGG + Chr8:23784495-23784514 MsG0880043370.01.T01:CDS 30.0%
TTAACCTCAATGTTGTCATA+CGG - Chr8:23784344-23784363 None:intergenic 30.0%
! ACAACACAATTTTTGTGTCA+TGG - Chr8:23784274-23784293 None:intergenic 30.0%
! ATCATTTAGTGTTGAAGTGA+TGG + Chr8:23785389-23785408 MsG0880043370.01.T01:intron 30.0%
! CAAAATTCATTCAAGTTCAC+CGG - Chr8:23784635-23784654 None:intergenic 30.0%
! CAGAAAAGCATAACCATTTA+TGG + Chr8:23785940-23785959 MsG0880043370.01.T01:CDS 30.0%
! CATAAATGGTTATGCTTTTC+TGG - Chr8:23785942-23785961 None:intergenic 30.0%
! CCTTTTCACATATGGATTTT+GGG + Chr8:23786331-23786350 MsG0880043370.01.T01:CDS 30.0%
! GAAAACCTTCTTTCTTTTGA+AGG + Chr8:23785082-23785101 MsG0880043370.01.T01:intron 30.0%
! TCATGTTTGAGATGACTATA+AGG + Chr8:23785860-23785879 MsG0880043370.01.T01:intron 30.0%
! TCATTTGTGTCTTTTCCATT+AGG - Chr8:23784094-23784113 None:intergenic 30.0%
! TCCTTTTCACATATGGATTT+TGG + Chr8:23786330-23786349 MsG0880043370.01.T01:CDS 30.0%
!! ATATGGATTTTGGGTGAATT+TGG + Chr8:23786340-23786359 MsG0880043370.01.T01:CDS 30.0%
!! ATGATAATGAATTTTGGGAG+GGG + Chr8:23785997-23786016 MsG0880043370.01.T01:CDS 30.0%
!! CTGATAAGGATAGCTATTTT+TGG + Chr8:23784468-23784487 MsG0880043370.01.T01:CDS 30.0%
!! GATGATAATGAATTTTGGGA+GGG + Chr8:23785996-23786015 MsG0880043370.01.T01:CDS 30.0%
!! TGATGATAATGAATTTTGGG+AGG + Chr8:23785995-23786014 MsG0880043370.01.T01:CDS 30.0%
!!! GACTTAGGTATTGAGATTTT+GGG + Chr8:23784203-23784222 MsG0880043370.01.T01:CDS 30.0%
!!! TGACTTAGGTATTGAGATTT+TGG + Chr8:23784202-23784221 MsG0880043370.01.T01:CDS 30.0%
AAATTGGCTAGATAGCTATC+CGG + Chr8:23784613-23784632 MsG0880043370.01.T01:CDS 35.0%
AACACATGTGAATCGTTTGA+GGG - Chr8:23783967-23783986 None:intergenic 35.0%
AAGTCATCTTCATGAAATGG+AGG - Chr8:23784188-23784207 None:intergenic 35.0%
AATCGTTTGAGGGATTTAAG+AGG - Chr8:23783957-23783976 None:intergenic 35.0%
AGAAAATGTGCATAAGGTGT+AGG - Chr8:23784126-23784145 None:intergenic 35.0%
AGACTATATATCTCCCAGAA+AGG - Chr8:23786049-23786068 None:intergenic 35.0%
ATTGAGGAGATCAAGGTTAA+AGG + Chr8:23785025-23785044 MsG0880043370.01.T01:intron 35.0%
ATTTGTGTCTCTATTGCAAC+TGG + Chr8:23785455-23785474 MsG0880043370.01.T01:intron 35.0%
CAGTTACCTTCAAAGTCAAA+GGG - Chr8:23784437-23784456 None:intergenic 35.0%
CATAACCATTTATGGGAGAT+GGG + Chr8:23785948-23785967 MsG0880043370.01.T01:CDS 35.0%
CCAATTTAAACGCATCTCAA+TGG - Chr8:23784600-23784619 None:intergenic 35.0%
CCATTGAGATGCGTTTAAAT+TGG + Chr8:23784597-23784616 MsG0880043370.01.T01:CDS 35.0%
CCATTTCATGAAGATGACTT+AGG + Chr8:23784188-23784207 MsG0880043370.01.T01:CDS 35.0%
CCCAAAATCCATATGTGAAA+AGG - Chr8:23786334-23786353 None:intergenic 35.0%
CCTAAGTCATCTTCATGAAA+TGG - Chr8:23784191-23784210 None:intergenic 35.0%
GAAAATGTGCATAAGGTGTA+GGG - Chr8:23784125-23784144 None:intergenic 35.0%
GGTATGATTTAAGTACCCAA+AGG + Chr8:23785002-23785021 MsG0880043370.01.T01:CDS 35.0%
GTGAAACTCTTGATGCAAAT+CGG - Chr8:23785628-23785647 None:intergenic 35.0%
TGAATTGTTGGATGAGATGT+TGG + Chr8:23785971-23785990 MsG0880043370.01.T01:CDS 35.0%
TGATCATAACCAAATCCCTA+AGG - Chr8:23785843-23785862 None:intergenic 35.0%
TGGAAAGAATAGAGAAAGCA+AGG - Chr8:23783929-23783948 None:intergenic 35.0%
TTTAAGTACCCAAAGGATTG+AGG + Chr8:23785009-23785028 MsG0880043370.01.T01:CDS 35.0%
TTTCATATCCAAACACAACG+AGG + Chr8:23784046-23784065 MsG0880043370.01.T01:CDS 35.0%
! ATGATGTAACAACGGTTTTG+TGG + Chr8:23785751-23785770 MsG0880043370.01.T01:intron 35.0%
! CATTATCCCTTTGACTTTGA+AGG + Chr8:23784428-23784447 MsG0880043370.01.T01:CDS 35.0%
! CTTTGACTTTGAAGGTAACT+GGG + Chr8:23784436-23784455 MsG0880043370.01.T01:CDS 35.0%
! TACACCTTATGCACATTTTC+TGG + Chr8:23784125-23784144 MsG0880043370.01.T01:CDS 35.0%
! TCTTTGAAGGTAATTGGGTT+TGG + Chr8:23785913-23785932 MsG0880043370.01.T01:CDS 35.0%
! TTCTCATTCGTTGATTGCAT+AGG + Chr8:23785210-23785229 MsG0880043370.01.T01:intron 35.0%
! TTGGGTTTTGCAAGTGTTAA+TGG + Chr8:23784221-23784240 MsG0880043370.01.T01:CDS 35.0%
!! ATATGGATTTTGGGTGAACT+CGG + Chr8:23784863-23784882 MsG0880043370.01.T01:CDS 35.0%
!! GACATGACTATAAGTTGATC+CGG + Chr8:23784399-23784418 MsG0880043370.01.T01:CDS 35.0%
!! TCCTGTCAAGTTCTAAACAA+TGG - Chr8:23784658-23784677 None:intergenic 35.0%
!! TTTTTCGGTTACCTAGATTC+AGG + Chr8:23784765-23784784 MsG0880043370.01.T01:CDS 35.0%
AAAAATGTTTCGCATCCCCT+AGG - Chr8:23784749-23784768 None:intergenic 40.0%
AAACACACGTCTCATCCTAA+TGG + Chr8:23784076-23784095 MsG0880043370.01.T01:CDS 40.0%
AATTGCTCAATATCCTGAGC+TGG + Chr8:23785890-23785909 MsG0880043370.01.T01:CDS 40.0%
AGCTACTTAGCAGTGATACA+TGG + Chr8:23784794-23784813 MsG0880043370.01.T01:CDS 40.0%
AGGCTATATATCTCCCAGAA+AGG - Chr8:23784548-23784567 None:intergenic 40.0%
AGGTAGTATATCCGATTCAG+AGG - Chr8:23786233-23786252 None:intergenic 40.0%
AGTTACATTCTTCCGGTTGA+TGG - Chr8:23785815-23785834 None:intergenic 40.0%
ATAGAGAAAGCAAGGTCGTT+AGG - Chr8:23783921-23783940 None:intergenic 40.0%
ATAGCCTCAAAAGTAACCCT+TGG + Chr8:23784561-23784580 MsG0880043370.01.T01:CDS 40.0%
ATTCACCCATCTCCCATAAA+TGG - Chr8:23785956-23785975 None:intergenic 40.0%
CAATGTTGTCATACGGTTGA+AGG - Chr8:23784337-23784356 None:intergenic 40.0%
CCAGTTACCTTCAAAGTCAA+AGG - Chr8:23784438-23784457 None:intergenic 40.0%
CTGGGTTAATGTACCTGATA+AGG + Chr8:23784454-23784473 MsG0880043370.01.T01:CDS 40.0%
CTTGATCTCCTCAATCCTTT+GGG - Chr8:23785020-23785039 None:intergenic 40.0%
GAACACATGTGAATCGTTTG+AGG - Chr8:23783968-23783987 None:intergenic 40.0%
GAGGGATTTAAGAGGCAATT+TGG - Chr8:23783949-23783968 None:intergenic 40.0%
GCATAACCATTTATGGGAGA+TGG + Chr8:23785947-23785966 MsG0880043370.01.T01:CDS 40.0%
GCCAAAGCAATTTGTCCAAA+GGG + Chr8:23785535-23785554 MsG0880043370.01.T01:intron 40.0%
GCTACTTAGCAGTGATACAT+GGG + Chr8:23784795-23784814 MsG0880043370.01.T01:CDS 40.0%
GGCTATATATCTCCCAGAAA+GGG - Chr8:23784547-23784566 None:intergenic 40.0%
GGTAGTATATCCGATTCAGA+GGG - Chr8:23786232-23786251 None:intergenic 40.0%
GTCTCAAAAGTAACTCATGG+AGG + Chr8:23786065-23786084 MsG0880043370.01.T01:intron 40.0%
TCAACCGTATGACAACATTG+AGG + Chr8:23784337-23784356 MsG0880043370.01.T01:CDS 40.0%
TCAAGGATTATGCGTCCTAT+TGG + Chr8:23786365-23786384 MsG0880043370.01.T01:CDS 40.0%
TCATCTTCATGAAATGGAGG+TGG - Chr8:23784185-23784204 None:intergenic 40.0%
TCCCTTTGGACAAATTGCTT+TGG - Chr8:23785539-23785558 None:intergenic 40.0%
TGATCATAACCAAATGCCAG+AGG - Chr8:23784374-23784393 None:intergenic 40.0%
TGCCAAAGCAATTTGTCCAA+AGG + Chr8:23785534-23785553 MsG0880043370.01.T01:intron 40.0%
TTGTGTCATGGAAAATGCCT+TGG - Chr8:23784262-23784281 None:intergenic 40.0%
! ATGGCATCAATTTTCCTCCA+AGG - Chr8:23784581-23784600 None:intergenic 40.0%
! CAAAGAGTCGACTTTCCAAA+GGG + Chr8:23785586-23785605 MsG0880043370.01.T01:intron 40.0%
! CCTTTGACTTTGAAGGTAAC+TGG + Chr8:23784435-23784454 MsG0880043370.01.T01:CDS 40.0%
! CTTGCAAAATGCGTCCTTTT+GGG + Chr8:23784927-23784946 MsG0880043370.01.T01:CDS 40.0%
! GCCATTGTTTAGAACTTGAC+AGG + Chr8:23784654-23784673 MsG0880043370.01.T01:CDS 40.0%
! TGGCATCAATTTTCCTCCAA+GGG - Chr8:23784580-23784599 None:intergenic 40.0%
! TTTTCCTCTCGTAGTGTAAG+AGG - Chr8:23786256-23786275 None:intergenic 40.0%
!! AACTCGGTGTTAAAGAATCG+TGG + Chr8:23784879-23784898 MsG0880043370.01.T01:CDS 40.0%
!! AATGAATTTTGGGAGGGGTA+CGG + Chr8:23786002-23786021 MsG0880043370.01.T01:CDS 40.0%
!! AGCTGGTCTTTGAAGGTAAT+TGG + Chr8:23785907-23785926 MsG0880043370.01.T01:CDS 40.0%
!! GCTGGTCTTTGAAGGTAATT+GGG + Chr8:23785908-23785927 MsG0880043370.01.T01:CDS 40.0%
!! TTTGGGTGAATTTGGTGTCA+AGG + Chr8:23786348-23786367 MsG0880043370.01.T01:CDS 40.0%
!!! AAAATGCGTCCTTTTGGGAT+AGG + Chr8:23784932-23784951 MsG0880043370.01.T01:CDS 40.0%
!!! GGATAGCTATTTTTGGGATG+TGG + Chr8:23784475-23784494 MsG0880043370.01.T01:CDS 40.0%
!!! GGGGATGCGAAACATTTTTT+CGG + Chr8:23784750-23784769 MsG0880043370.01.T01:CDS 40.0%
AAATCGGAGAGGCAAAACGT+TGG - Chr8:23785612-23785631 None:intergenic 45.0%
AAGGTGATGAGGAGATAGCT+TGG + Chr8:23784981-23785000 MsG0880043370.01.T01:CDS 45.0%
AAGGTTAAAGGAGAGTCAGC+TGG + Chr8:23785037-23785056 MsG0880043370.01.T01:intron 45.0%
ACCATAAAATCTCCAGCAGC+AGG - Chr8:23785780-23785799 None:intergenic 45.0%
ACTCTTGATGCAAATCGGAG+AGG - Chr8:23785623-23785642 None:intergenic 45.0%
AGAATGTAACTGCCAGCCTT+AGG + Chr8:23785824-23785843 MsG0880043370.01.T01:intron 45.0%
AGGTTAAAGGAGAGTCAGCT+GGG + Chr8:23785038-23785057 MsG0880043370.01.T01:intron 45.0%
ATGGGAGATGGGTGAATTGT+TGG + Chr8:23785959-23785978 MsG0880043370.01.T01:CDS 45.0%
ATTATGCGTCCTATTGGAGC+AGG + Chr8:23786371-23786390 MsG0880043370.01.T01:CDS 45.0%
CAAAGGGATAATGCGCAATC+CGG - Chr8:23784421-23784440 None:intergenic 45.0%
CATAACCAAATCCCTAAGGC+TGG - Chr8:23785839-23785858 None:intergenic 45.0%
CCAAAGGATTGAGGAGATCA+AGG + Chr8:23785018-23785037 MsG0880043370.01.T01:CDS 45.0%
CCATAAAATCTCCAGCAGCA+GGG - Chr8:23785779-23785798 None:intergenic 45.0%
CCTTGATCTCCTCAATCCTT+TGG - Chr8:23785021-23785040 None:intergenic 45.0%
CTCGCCAGAAAATGTGCATA+AGG - Chr8:23784132-23784151 None:intergenic 45.0%
CTCTTGATGCCTATCCCAAA+AGG - Chr8:23784944-23784963 None:intergenic 45.0%
CTTTGCTACAACCTTACCCT+CGG + Chr8:23784709-23784728 MsG0880043370.01.T01:CDS 45.0%
GAATGTAACTGCCAGCCTTA+GGG + Chr8:23785825-23785844 MsG0880043370.01.T01:intron 45.0%
GTGCATAAGGTGTAGGGAAA+GGG - Chr8:23784119-23784138 None:intergenic 45.0%
TAGCTCTTCAGCCTGAATCT+AGG - Chr8:23784779-23784798 None:intergenic 45.0%
TCATAACCAAATGCCAGAGG+AGG - Chr8:23784371-23784390 None:intergenic 45.0%
TGTGCATAAGGTGTAGGGAA+AGG - Chr8:23784120-23784139 None:intergenic 45.0%
TTACCTTCAAAGACCAGCTC+AGG - Chr8:23785906-23785925 None:intergenic 45.0%
TTATGCGTCCTATTGGAGCA+GGG + Chr8:23786372-23786391 MsG0880043370.01.T01:CDS 45.0%
TTCACTGTCCTCGTTGTGTT+TGG - Chr8:23784057-23784076 None:intergenic 45.0%
TTGTCATACGGTTGAAGGCT+AGG - Chr8:23784332-23784351 None:intergenic 45.0%
! AAAGGACGCATTTTGCAAGG+TGG - Chr8:23784926-23784945 None:intergenic 45.0%
! CCAAAAGGACGCATTTTGCA+AGG - Chr8:23784929-23784948 None:intergenic 45.0%
! CCAAAGAGTCGACTTTCCAA+AGG + Chr8:23785585-23785604 MsG0880043370.01.T01:intron 45.0%
! CCTTGCAAAATGCGTCCTTT+TGG + Chr8:23784926-23784945 MsG0880043370.01.T01:CDS 45.0%
! CCTTTGGAAAGTCGACTCTT+TGG - Chr8:23785588-23785607 None:intergenic 45.0%
! GTTGGCTTAAAAAGGCCTAG+GGG + Chr8:23784731-23784750 MsG0880043370.01.T01:CDS 45.0%
! TTTTAAGCCAACCGAGGGTA+AGG - Chr8:23784723-23784742 None:intergenic 45.0%
!! ATTTTCTGGCGAGAAGTTGG+AGG + Chr8:23784139-23784158 MsG0880043370.01.T01:CDS 45.0%
!! CACATTTTCTGGCGAGAAGT+TGG + Chr8:23784136-23784155 MsG0880043370.01.T01:CDS 45.0%
!! GGTTGGCTTAAAAAGGCCTA+GGG + Chr8:23784730-23784749 MsG0880043370.01.T01:CDS 45.0%
!! TACCCTCGGTTGGCTTAAAA+AGG + Chr8:23784723-23784742 MsG0880043370.01.T01:CDS 45.0%
!! TACTTTCTGGGATAGACGAG+TGG + Chr8:23784508-23784527 MsG0880043370.01.T01:CDS 45.0%
!! TATCCTGAGCTGGTCTTTGA+AGG + Chr8:23785900-23785919 MsG0880043370.01.T01:CDS 45.0%
!!! TCCTCCAAGGGTTACTTTTG+AGG - Chr8:23784568-23784587 None:intergenic 45.0%
AACTGCCAGCCTTAGGGATT+TGG + Chr8:23785831-23785850 MsG0880043370.01.T01:intron 50.0%
AAGACACCTCCTCTGGCATT+TGG + Chr8:23784362-23784381 MsG0880043370.01.T01:CDS 50.0%
ACCTCCTCTTACACTACGAG+AGG + Chr8:23786249-23786268 MsG0880043370.01.T01:CDS 50.0%
ACGATGAAAACCACCACCAC+AGG - Chr8:23786119-23786138 None:intergenic 50.0%
CATTCCACCTAGCCATCAAC+CGG + Chr8:23785800-23785819 MsG0880043370.01.T01:intron 50.0%
CGATGAAAACCACCACCACA+GGG - Chr8:23786118-23786137 None:intergenic 50.0%
CTCTTCTTCCCTGCTCCAAT+AGG - Chr8:23786383-23786402 None:intergenic 50.0%
GCCTCAAAAGTAACCCTTGG+AGG + Chr8:23784564-23784583 MsG0880043370.01.T01:CDS 50.0%
GGAGATGAACGACCCTTTCT+GGG + Chr8:23784532-23784551 MsG0880043370.01.T01:CDS 50.0%
GGCACTCTTTGTCTCTACCA+AGG + Chr8:23784242-23784261 MsG0880043370.01.T01:CDS 50.0%
GGCTGGCAGTTACATTCTTC+CGG - Chr8:23785822-23785841 None:intergenic 50.0%
TCATACGGTTGAAGGCTAGG+AGG - Chr8:23784329-23784348 None:intergenic 50.0%
TCCTCTCGTAGTGTAAGAGG+AGG - Chr8:23786253-23786272 None:intergenic 50.0%
TGAGGTTAAGACACCTCCTC+TGG + Chr8:23784355-23784374 MsG0880043370.01.T01:CDS 50.0%
TGGAGATGAACGACCCTTTC+TGG + Chr8:23784531-23784550 MsG0880043370.01.T01:CDS 50.0%
! CCCTGCTGCTGGAGATTTTA+TGG + Chr8:23785776-23785795 MsG0880043370.01.T01:intron 50.0%
!! AATTTTGGGAGGGGTACGGT+GGG + Chr8:23786006-23786025 MsG0880043370.01.T01:intron 50.0%
!! AGGCCTTTTTAAGCCAACCG+AGG - Chr8:23784729-23784748 None:intergenic 50.0%
!! CATTCTTCCGGTTGATGGCT+AGG - Chr8:23785810-23785829 None:intergenic 50.0%
!! CGGTTGGCTTAAAAAGGCCT+AGG + Chr8:23784729-23784748 MsG0880043370.01.T01:CDS 50.0%
!! GGCCTTTTTAAGCCAACCGA+GGG - Chr8:23784728-23784747 None:intergenic 50.0%
!! TTTCTGGGATAGACGAGTGG+TGG + Chr8:23784511-23784530 MsG0880043370.01.T01:CDS 50.0%
AAACCACCACCACAGGGATC+AGG - Chr8:23786112-23786131 None:intergenic 55.0%
CACAGGGATCAGGCATACGA+GGG - Chr8:23786102-23786121 None:intergenic 55.0%
CTGGCGAGAAGTTGGAGGAT+GGG + Chr8:23784144-23784163 MsG0880043370.01.T01:CDS 55.0%
GAGGCAAAACGTTGGCCCTT+TGG - Chr8:23785604-23785623 None:intergenic 55.0%
GCTACAACCTTACCCTCGGT+TGG + Chr8:23784713-23784732 MsG0880043370.01.T01:CDS 55.0%
GGCTGCTGCAACACATAAGC+TGG + Chr8:23783878-23783897 MsG0880043370.01.T01:CDS 55.0%
TCTGGCGAGAAGTTGGAGGA+TGG + Chr8:23784143-23784162 MsG0880043370.01.T01:CDS 55.0%
TGGCGAGAAGTTGGAGGATG+GGG + Chr8:23784145-23784164 MsG0880043370.01.T01:CDS 55.0%
! GTTTTGTGGAACCCTGCTGC+TGG + Chr8:23785765-23785784 MsG0880043370.01.T01:intron 55.0%
!! GAATTTTGGGAGGGGTACGG+TGG + Chr8:23786005-23786024 MsG0880043370.01.T01:intron 55.0%
!! TCTTCCGGTTGATGGCTAGG+TGG - Chr8:23785807-23785826 None:intergenic 55.0%
ATGCCTGATCCCTGTGGTGG+TGG + Chr8:23786106-23786125 MsG0880043370.01.T01:intron 60.0%
CCACAGGGATCAGGCATACG+AGG - Chr8:23786103-23786122 None:intergenic 60.0%
CCTCGTATGCCTGATCCCTG+TGG + Chr8:23786100-23786119 MsG0880043370.01.T01:intron 60.0%
CGTATGCCTGATCCCTGTGG+TGG + Chr8:23786103-23786122 MsG0880043370.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 23783876 23786417 23783876 ID=MsG0880043370.01;Name=MsG0880043370.01
Chr8 mRNA 23783876 23786417 23783876 ID=MsG0880043370.01.T01;Parent=MsG0880043370.01;Name=MsG0880043370.01.T01;_AED=0.14;_eAED=0.16;_QI=0|0|0|1|1|1|3|0|517
Chr8 exon 23783876 23785039 23783876 ID=MsG0880043370.01.T01:exon:8693;Parent=MsG0880043370.01.T01
Chr8 exon 23785882 23786023 23785882 ID=MsG0880043370.01.T01:exon:8694;Parent=MsG0880043370.01.T01
Chr8 exon 23786170 23786417 23786170 ID=MsG0880043370.01.T01:exon:8695;Parent=MsG0880043370.01.T01
Chr8 CDS 23783876 23785039 23783876 ID=MsG0880043370.01.T01:cds;Parent=MsG0880043370.01.T01
Chr8 CDS 23785882 23786023 23785882 ID=MsG0880043370.01.T01:cds;Parent=MsG0880043370.01.T01
Chr8 CDS 23786170 23786417 23786170 ID=MsG0880043370.01.T01:cds;Parent=MsG0880043370.01.T01
Gene Sequence

>MsG0880043370.01.T01

ATGGCTGCTGCAACACATAAGCTGGTAAGTACTACTTACATTCCTAACGACCTTGCTTTCTCTATTCTTTCCAAATTGCCTCTTAAATCCCTCAAACGATTCACATGTGTTCAAAAATCATTTTCCCTTTTATTTGAAAGCCCTGATTTTATGAACATGTTTCGCACCAATTTCATATCCAAACACAACGAGGACAGTGAAAACACACGTCTCATCCTAATGGAAAAGACACAAATGATTCCCTTTCCCTACACCTTATGCACATTTTCTGGCGAGAAGTTGGAGGATGGGGAGAGATTAGATTGTCCACCTCCATTTCATGAAGATGACTTAGGTATTGAGATTTTGGGTTTTGCAAGTGTTAATGGCACTCTTTGTCTCTACCAAGGCATTTTCCATGACACAAAAATTGTGTTGTGGAATCCTGCTACTAAAGAATTTAAGGTTGTTCCTCCTAGCCTTCAACCGTATGACAACATTGAGGTTAAGACACCTCCTCTGGCATTTGGTTATGATCATGTTAGACATGACTATAAGTTGATCCGGATTGCGCATTATCCCTTTGACTTTGAAGGTAACTGGGTTAATGTACCTGATAAGGATAGCTATTTTTGGGATGTGGATTATGATCATACTTTCTGGGATAGACGAGTGGTGGAGATGAACGACCCTTTCTGGGAGATATATAGCCTCAAAAGTAACCCTTGGAGGAAAATTGATGCCATTGAGATGCGTTTAAATTGGCTAGATAGCTATCCGGTGAACTTGAATGAATTTTGCCATTGTTTAGAACTTGACAGGATTTTGTCATTTGACTTTATCAATGAAATAGTCTTTGCTACAACCTTACCCTCGGTTGGCTTAAAAAGGCCTAGGGGATGCGAAACATTTTTTCGGTTACCTAGATTCAGGCTGAAGAGCTACTTAGCAGTGATACATGGGTCTATTGCTTTCATCTCCAATATTGACGTGTCAAGTTTTTATGACATATGGATTTTGGGTGAACTCGGTGTTAAAGAATCGTGGATTAAACTCTTCGTTGTTGATCCACCTTGCAAAATGCGTCCTTTTGGGATAGGCATCAAGAGCTTTATATTCTTCATAAAAGGTGATGAGGAGATAGCTTGGTATGATTTAAGTACCCAAAGGATTGAGGAGATCAAGGTGATTCGAATTGCTCAATATCCTGAGCTGGTCTTTGAAGGTAATTGGGTTTGGTTACCAGAAAAGCATAACCATTTATGGGAGATGGGTGAATTGTTGGATGAGATGTTGGATGATGATAATGAATTTTGGGAGGGGTACGTGTCAAGTTATATGTTGTCTTTTGACTTTAGTAATGAGATATTCTTTTCAACAAATTTACCCTCTGAATCGGATATACTACCTCCTCTTACACTACGAGAGGAAAACTTAGTAGTGTTAAATGGGTCAATTCTTCTAATATTTAATGAATTCCTTAAAACTCCTTTTCACATATGGATTTTGGGTGAATTTGGTGTCAAGGATTATGCGTCCTATTGGAGCAGGGAAGAAGAGTCGTATATTCATTAG
Protein sequence

>MsG0880043370.01.T01

MAAATHKLVSTTYIPNDLAFSILSKLPLKSLKRFTCVQKSFSLLFESPDFMNMFRTNFISKHNEDSENTRLILMEKTQMIPFPYTLCTFSGEKLEDGERLDCPPPFHEDDLGIEILGFASVNGTLCLYQGIFHDTKIVLWNPATKEFKVVPPSLQPYDNIEVKTPPLAFGYDHVRHDYKLIRIAHYPFDFEGNWVNVPDKDSYFWDVDYDHTFWDRRVVEMNDPFWEIYSLKSNPWRKIDAIEMRLNWLDSYPVNLNEFCHCLELDRILSFDFINEIVFATTLPSVGLKRPRGCETFFRLPRFRLKSYLAVIHGSIAFISNIDVSSFYDIWILGELGVKESWIKLFVVDPPCKMRPFGIGIKSFIFFIKGDEEIAWYDLSTQRIEEIKVIRIAQYPELVFEGNWVWLPEKHNHLWEMGELLDEMLDDDNEFWEGYVSSYMLSFDFSNEIFFSTNLPSESDILPPLTLREENLVVLNGSILLIFNEFLKTPFHIWILGEFGVKDYASYWSREEESYIH*