AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030085.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030085.01.T01 MTR_5g097350 75.628 398 80 3 62 455 2 386 0.0 586
MsG0580030085.01.T01 MTR_5g097330 54.369 412 151 14 65 454 5 401 8.01e-132 387
MsG0580030085.01.T01 MTR_8g012090 51.436 383 114 9 64 426 4 334 4.16e-111 332
MsG0580030085.01.T01 MTR_8g063440 46.650 403 186 10 65 457 1 384 4.62e-108 326
MsG0580030085.01.T01 MTR_0129s0120 47.015 402 182 11 68 454 9 394 4.85e-107 323
MsG0580030085.01.T01 MTR_0129s0070 46.552 406 186 11 62 452 3 392 9.87e-107 323
MsG0580030085.01.T01 MTR_2g038680 46.062 419 185 12 62 452 2 407 5.30e-106 321
MsG0580030085.01.T01 MTR_7g111700 47.242 417 147 13 62 457 2 366 1.76e-103 313
MsG0580030085.01.T01 MTR_6g086825 47.118 399 183 10 74 453 68 457 1.89e-103 317
MsG0580030085.01.T01 MTR_5g097220 45.070 426 184 11 62 456 2 408 2.88e-101 309
MsG0580030085.01.T01 MTR_7g017130 43.489 407 203 12 59 452 1 393 1.41e-100 307
MsG0580030085.01.T01 MTR_2g022000 43.953 430 204 14 62 463 2 422 7.22e-100 306
MsG0580030085.01.T01 MTR_0054s0090 45.199 427 183 15 61 457 2 407 1.36e-98 302
MsG0580030085.01.T01 MTR_7g017170 44.072 388 191 11 59 434 1 374 1.73e-98 302
MsG0580030085.01.T01 MTR_0054s0100 45.093 428 184 15 61 457 2 409 8.46e-98 300
MsG0580030085.01.T01 MTR_2g021800 44.096 415 196 12 62 448 2 408 1.07e-97 300
MsG0580030085.01.T01 MTR_7g017040 44.363 408 193 13 63 452 3 394 1.27e-96 297
MsG0580030085.01.T01 MTR_5g037680 42.822 404 183 11 71 451 3 381 1.46e-96 298
MsG0580030085.01.T01 MTR_2g021950 43.704 405 201 13 62 452 2 393 3.34e-95 293
MsG0580030085.01.T01 MTR_6g090180 42.593 432 211 12 47 454 18 436 5.18e-95 294
MsG0580030085.01.T01 MTR_0129s0050 43.943 421 180 14 62 448 2 400 8.12e-95 293
MsG0580030085.01.T01 MTR_2g066200 41.584 404 210 11 65 457 1 389 1.24e-93 289
MsG0580030085.01.T01 MTR_6g079770 42.991 428 200 12 62 457 3 418 4.14e-93 288
MsG0580030085.01.T01 MTR_4g117550 43.147 394 180 11 67 450 8 367 6.91e-93 286
MsG0580030085.01.T01 MTR_7g069550 43.415 410 187 15 63 448 3 391 2.68e-92 286
MsG0580030085.01.T01 MTR_0134s0060 43.062 418 194 11 65 450 1 406 5.20e-92 285
MsG0580030085.01.T01 MTR_6g080680 42.482 419 184 14 59 450 1 389 3.32e-91 283
MsG0580030085.01.T01 MTR_2g104340 43.489 407 188 15 66 450 4 390 3.68e-91 283
MsG0580030085.01.T01 MTR_2g021770 39.512 410 209 10 70 452 6 403 2.22e-90 281
MsG0580030085.01.T01 MTR_2g066170 40.704 398 206 11 65 450 1 380 5.38e-90 279
MsG0580030085.01.T01 MTR_4g102410 43.243 407 204 13 65 453 50 447 1.21e-89 280
MsG0580030085.01.T01 MTR_8g041270 43.066 411 191 13 69 452 8 402 4.68e-89 278
MsG0580030085.01.T01 MTR_5g059430 41.446 415 207 11 70 456 20 426 1.06e-88 277
MsG0580030085.01.T01 MTR_6g461660 43.198 419 189 14 61 454 4 398 1.58e-88 276
MsG0580030085.01.T01 MTR_5g097680 41.972 436 195 16 61 452 2 423 2.01e-88 276
MsG0580030085.01.T01 MTR_4g055820 44.986 369 169 11 66 413 4 359 5.60e-88 273
MsG0580030085.01.T01 MTR_2g065860 40.876 411 193 14 65 452 1 384 4.27e-87 272
MsG0580030085.01.T01 MTR_6g079810 42.588 425 194 14 59 452 54 459 7.06e-87 274
MsG0580030085.01.T01 MTR_5g092850 40.995 422 201 14 66 461 6 405 5.62e-86 270
MsG0580030085.01.T01 MTR_1g007450 43.367 392 185 14 65 436 1 375 9.56e-86 270
MsG0580030085.01.T01 MTR_2g065840 40.876 411 194 14 65 452 1 385 2.22e-85 268
MsG0580030085.01.T01 MTR_6g478230 41.067 431 202 12 56 460 7 411 2.54e-85 268
MsG0580030085.01.T01 MTR_5g096630 40.625 416 211 14 64 453 6 411 8.84e-85 267
MsG0580030085.01.T01 MTR_8g464770 40.355 394 207 11 65 450 1 374 2.54e-84 265
MsG0580030085.01.T01 MTR_4g028660 40.964 415 203 14 63 454 2 397 9.46e-84 263
MsG0580030085.01.T01 MTR_4g027450 40.964 415 203 14 63 454 2 397 9.46e-84 263
MsG0580030085.01.T01 MTR_3g011120 42.317 397 185 14 65 445 1 369 1.32e-83 262
MsG0580030085.01.T01 MTR_5g069390 39.905 421 215 12 70 462 20 430 2.28e-83 266
MsG0580030085.01.T01 MTR_4g130330 43.735 407 169 17 78 452 9 387 3.09e-83 262
MsG0580030085.01.T01 MTR_4g014370 40.235 425 196 15 67 453 2 406 3.12e-83 263
MsG0580030085.01.T01 MTR_2g104280 41.463 410 195 13 71 452 9 401 4.46e-83 262
MsG0580030085.01.T01 MTR_4g028510 42.105 418 193 16 63 452 2 398 6.54e-83 263
MsG0580030085.01.T01 MTR_8g039500 40.650 369 189 8 65 426 1 346 3.02e-82 258
MsG0580030085.01.T01 MTR_4g028680 41.050 419 206 14 62 457 1 401 3.79e-81 257
MsG0580030085.01.T01 MTR_1g007410 40.000 420 214 15 55 453 1 403 1.39e-80 256
MsG0580030085.01.T01 MTR_7g079640 41.960 398 183 14 63 447 3 365 2.32e-80 254
MsG0580030085.01.T01 MTR_0831s0010 39.416 411 204 16 61 452 33 417 5.63e-80 254
MsG0580030085.01.T01 MTR_2g064950 40.547 402 191 13 70 447 4 381 1.33e-79 253
MsG0580030085.01.T01 MTR_2g066150 38.821 407 189 13 65 457 1 361 1.59e-78 249
MsG0580030085.01.T01 MTR_8g064890 41.058 397 184 16 74 449 14 381 8.41e-78 248
MsG0580030085.01.T01 MTR_2g034700 40.625 384 184 14 66 436 3 355 1.78e-77 246
MsG0580030085.01.T01 MTR_1g053510 39.100 422 199 15 64 450 2 400 5.97e-77 246
MsG0580030085.01.T01 MTR_8g013000 42.742 372 165 12 70 415 4 353 1.62e-76 245
MsG0580030085.01.T01 MTR_5g074850 42.537 402 173 17 66 434 25 401 3.19e-76 256
MsG0580030085.01.T01 MTR_8g046310 39.901 406 195 16 66 454 3 376 1.06e-75 242
MsG0580030085.01.T01 MTR_7g016930 43.243 333 150 7 62 387 2 302 9.74e-75 238
MsG0580030085.01.T01 MTR_8g046200 37.753 445 194 17 66 454 3 420 1.22e-74 241
MsG0580030085.01.T01 MTR_5g096910 38.592 412 199 13 66 452 7 389 1.36e-74 240
MsG0580030085.01.T01 MTR_5g072060 40.576 382 166 15 74 432 4 347 4.79e-74 245
MsG0580030085.01.T01 MTR_8g467670 38.875 391 206 13 78 459 16 382 2.18e-73 237
MsG0580030085.01.T01 MTR_4g028750 37.923 414 209 13 63 457 2 386 4.50e-73 236
MsG0580030085.01.T01 MTR_5g075370 40.554 397 177 15 77 438 9 381 6.20e-72 243
MsG0580030085.01.T01 MTR_8g063330 40.108 369 179 13 65 412 1 348 4.52e-71 233
MsG0580030085.01.T01 MTR_5g024260 38.519 405 191 16 78 453 24 399 2.32e-70 229
MsG0580030085.01.T01 MTR_6g090250 39.109 404 189 14 96 454 31 422 1.20e-69 228
MsG0580030085.01.T01 MTR_8g032980 35.927 437 202 13 67 450 4 415 1.67e-69 228
MsG0580030085.01.T01 MTR_8g033140 35.814 430 208 13 66 450 6 412 2.05e-69 227
MsG0580030085.01.T01 MTR_5g074800 41.292 356 167 15 115 448 1 336 7.15e-69 223
MsG0580030085.01.T01 MTR_8g046220 36.028 433 202 15 66 454 3 404 6.42e-68 223
MsG0580030085.01.T01 MTR_8g036970 39.353 371 152 11 80 441 2 308 8.22e-68 221
MsG0580030085.01.T01 MTR_6g078010 40.947 359 161 14 113 450 1 329 6.21e-67 218
MsG0580030085.01.T01 MTR_5g022850 35.610 410 181 10 63 452 3 349 7.76e-67 218
MsG0580030085.01.T01 MTR_8g033090 36.131 429 214 12 65 453 1 409 1.08e-65 217
MsG0580030085.01.T01 MTR_1g007430 42.229 341 154 12 86 410 6 319 2.28e-65 214
MsG0580030085.01.T01 MTR_5g064700 39.892 371 183 14 115 452 1 364 8.73e-65 213
MsG0580030085.01.T01 MTR_4g007940 38.068 352 176 11 126 452 4 338 1.30e-64 212
MsG0580030085.01.T01 MTR_8g033110 35.023 434 215 10 65 453 1 412 2.98e-64 213
MsG0580030085.01.T01 MTR_5g092860 37.978 366 165 12 95 434 21 350 3.20e-64 212
MsG0580030085.01.T01 MTR_5g091140 35.266 414 206 14 59 447 31 407 1.21e-63 212
MsG0580030085.01.T01 MTR_1g098180 36.387 393 185 15 74 450 17 360 1.17e-62 208
MsG0580030085.01.T01 MTR_6g079790 42.671 307 152 11 164 450 1 303 6.51e-62 204
MsG0580030085.01.T01 MTR_8g064790 34.343 396 183 11 65 449 1 330 1.23e-60 202
MsG0580030085.01.T01 MTR_5g096900 39.489 352 141 14 65 382 1 314 8.74e-60 199
MsG0580030085.01.T01 MTR_8g063370 33.333 405 224 15 68 455 16 391 8.34e-59 199
MsG0580030085.01.T01 MTR_5g037190 40.925 281 125 8 62 333 2 250 8.42e-59 194
MsG0580030085.01.T01 MTR_1g050312 41.118 304 132 12 153 446 16 282 4.72e-58 193
MsG0580030085.01.T01 MTR_6g087620 39.355 310 141 9 153 446 1 279 5.10e-58 193
MsG0580030085.01.T01 MTR_5g023970 51.515 198 81 5 263 453 4 193 2.31e-57 188
MsG0580030085.01.T01 MTR_8g018110 34.845 419 218 13 65 453 1 394 4.89e-57 194
MsG0580030085.01.T01 MTR_1g050308 33.835 399 185 12 60 452 18 343 6.77e-57 192
MsG0580030085.01.T01 MTR_7g104710 40.566 318 138 12 67 373 8 285 2.63e-56 190
MsG0580030085.01.T01 MTR_5g097820 40.925 281 133 10 65 331 8 269 4.11e-55 185
MsG0580030085.01.T01 MTR_4g014370 33.911 404 183 14 59 453 6 334 4.43e-55 187
MsG0580030085.01.T01 MTR_1g076810 45.238 252 104 11 67 303 9 241 4.05e-53 189
MsG0580030085.01.T01 MTR_7g023800 36.364 363 154 12 115 454 1 309 1.42e-52 179
MsG0580030085.01.T01 MTR_5g043605 38.585 311 161 12 149 448 40 331 7.15e-52 179
MsG0580030085.01.T01 MTR_2g021920 42.917 240 111 8 232 452 37 269 3.20e-50 172
MsG0580030085.01.T01 MTR_5g094350 37.793 299 133 9 72 348 9 276 3.99e-50 172
MsG0580030085.01.T01 MTR_6g004450 45.887 231 109 8 229 453 46 266 1.59e-49 170
MsG0580030085.01.T01 MTR_8g063310 31.773 406 224 16 67 448 13 389 2.03e-48 171
MsG0580030085.01.T01 MTR_3g018750 42.213 244 115 8 231 454 2 239 7.12e-48 165
MsG0580030085.01.T01 MTR_5g086590 41.597 238 111 8 201 429 13 231 1.98e-45 159
MsG0580030085.01.T01 MTR_8g033000 33.073 384 184 15 113 450 1 357 7.35e-45 160
MsG0580030085.01.T01 MTR_6g070880 37.402 254 129 8 58 290 14 258 3.06e-44 156
MsG0580030085.01.T01 MTR_6g071420 37.402 254 129 8 58 290 14 258 3.06e-44 156
MsG0580030085.01.T01 MTR_8g063350 32.570 393 169 19 78 446 16 336 3.41e-43 155
MsG0580030085.01.T01 MTR_6g090260 44.560 193 93 4 271 454 75 262 2.85e-42 151
MsG0580030085.01.T01 MTR_6g090260 49.398 83 41 1 60 141 3 85 1.34e-15 77.0
MsG0580030085.01.T01 MTR_2g104260 37.113 291 149 10 66 339 4 277 2.01e-41 149
MsG0580030085.01.T01 MTR_5g076490 36.240 367 172 15 113 452 1 332 2.49e-41 150
MsG0580030085.01.T01 MTR_6g465360 42.788 208 92 6 61 251 47 244 3.87e-41 149
MsG0580030085.01.T01 MTR_5g068490 37.710 297 144 14 162 450 8 271 6.43e-41 148
MsG0580030085.01.T01 MTR_5g097850 44.503 191 82 4 275 452 62 241 8.69e-41 147
MsG0580030085.01.T01 MTR_7g019250 39.655 232 104 6 215 434 206 413 4.62e-39 147
MsG0580030085.01.T01 MTR_8g073570 44.068 177 90 5 68 243 2 170 1.48e-37 135
MsG0580030085.01.T01 MTR_6g009350 41.538 195 101 8 232 420 8 195 2.47e-36 133
MsG0580030085.01.T01 MTR_5g098950 41.935 217 90 7 203 415 90 274 7.42e-36 134
MsG0580030085.01.T01 MTR_4g016000 39.320 206 102 7 206 406 2 189 5.29e-35 130
MsG0580030085.01.T01 MTR_7g101200 39.640 222 95 10 201 414 38 228 2.47e-34 129
MsG0580030085.01.T01 MTR_5g097650 41.765 170 80 3 59 224 1 155 2.42e-33 124
MsG0580030085.01.T01 MTR_7g017150 42.932 191 93 7 271 453 82 264 7.27e-31 120
MsG0580030085.01.T01 MTR_8g035690 33.564 289 126 14 207 450 30 297 1.79e-30 120
MsG0580030085.01.T01 MTR_7g017120 42.932 191 93 7 271 453 81 263 1.98e-30 119
MsG0580030085.01.T01 MTR_1g047080 30.141 355 153 17 113 450 1 277 4.02e-30 119
MsG0580030085.01.T01 MTR_1g115205 32.509 283 121 10 61 325 18 248 3.16e-29 115
MsG0580030085.01.T01 MTR_5g091150 34.855 241 90 9 164 379 1 199 1.28e-28 112
MsG0580030085.01.T01 MTR_5g096920 38.217 157 82 4 302 452 1 148 6.53e-28 108
MsG0580030085.01.T01 MTR_3g019290 34.091 220 98 7 65 278 1 179 1.80e-27 108
MsG0580030085.01.T01 MTR_6g079730 45.926 135 66 3 327 454 14 148 1.31e-26 105
MsG0580030085.01.T01 MTR_2g022020 51.000 100 47 2 354 452 18 116 1.59e-26 103
MsG0580030085.01.T01 MTR_5g097540 36.022 186 102 5 234 415 61 233 6.29e-26 107
MsG0580030085.01.T01 MTR_3g030620 40.361 166 80 7 299 452 20 178 2.49e-25 102
MsG0580030085.01.T01 MTR_4g133170 24.267 375 225 15 79 436 7 339 2.93e-25 107
MsG0580030085.01.T01 MTR_5g036250 55.208 96 42 1 354 448 8 103 4.76e-25 102
MsG0580030085.01.T01 MTR_5g096070 38.462 182 73 5 63 239 11 158 4.78e-25 101
MsG0580030085.01.T01 MTR_5g066420 39.474 152 81 4 302 445 1 149 9.16e-25 100
MsG0580030085.01.T01 MTR_3g013770 29.598 348 204 16 79 420 36 348 9.71e-25 105
MsG0580030085.01.T01 MTR_7g070440 27.397 365 197 15 78 414 9 333 2.81e-24 104
MsG0580030085.01.T01 MTR_2g021150 27.110 391 228 19 78 450 16 367 4.44e-24 103
MsG0580030085.01.T01 MTR_8g041440 48.571 105 31 1 68 172 7 88 6.73e-23 94.0
MsG0580030085.01.T01 MTR_2g026010 27.134 328 189 16 139 432 32 343 1.44e-22 99.8
MsG0580030085.01.T01 MTR_5g086780 49.524 105 47 2 335 433 124 228 4.49e-22 95.1
MsG0580030085.01.T01 MTR_5g086780 66.667 63 19 1 62 122 2 64 1.21e-17 82.4
MsG0580030085.01.T01 MTR_3g013740 27.879 330 205 13 71 393 39 342 6.49e-22 98.2
MsG0580030085.01.T01 MTR_1g068875 25.069 363 214 15 84 429 12 333 5.33e-21 94.7
MsG0580030085.01.T01 MTR_2g031720 24.490 392 236 16 79 452 9 358 6.73e-21 94.7
MsG0580030085.01.T01 MTR_5g049560 37.500 152 83 3 113 252 1 152 9.61e-21 92.0
MsG0580030085.01.T01 MTR_4g023080 27.321 377 216 16 84 450 17 345 9.84e-21 93.6
MsG0580030085.01.T01 MTR_4g030830 25.124 402 240 15 84 450 17 392 1.41e-20 94.0
MsG0580030085.01.T01 MTR_3g011060 27.809 356 206 16 84 425 36 354 2.51e-20 93.2
MsG0580030085.01.T01 MTR_3g014540 25.352 355 206 14 79 420 32 340 3.37e-20 92.4
MsG0580030085.01.T01 MTR_2g029990 25.505 396 223 19 79 450 54 401 7.32e-20 91.7
MsG0580030085.01.T01 MTR_2g031640 26.300 327 188 16 154 452 53 354 8.58e-20 91.3
MsG0580030085.01.T01 MTR_4g021785 26.330 376 222 13 84 450 17 346 1.69e-19 90.1
MsG0580030085.01.T01 MTR_3g009310 27.900 319 189 13 79 393 45 326 3.17e-19 89.7
MsG0580030085.01.T01 MTR_5g097660 44.860 107 56 3 353 456 14 120 3.74e-19 83.6
MsG0580030085.01.T01 MTR_6g048140 26.741 359 204 14 84 427 47 361 8.08e-19 88.6
MsG0580030085.01.T01 MTR_2g046900 25.917 409 251 17 60 450 9 383 8.80e-19 88.6
MsG0580030085.01.T01 MTR_5g022420 24.427 393 232 15 78 458 29 368 1.61e-18 87.4
MsG0580030085.01.T01 MTR_0044s0300 23.573 403 243 16 41 430 5 355 1.78e-18 87.4
MsG0580030085.01.T01 MTR_3g047580 36.842 152 61 6 69 215 6 127 2.90e-18 81.3
MsG0580030085.01.T01 MTR_7g407070 27.042 355 218 17 79 420 35 361 3.58e-18 86.7
MsG0580030085.01.T01 MTR_2g078900 24.860 358 197 18 79 420 36 337 3.78e-18 86.3
MsG0580030085.01.T01 MTR_5g057710 28.267 329 175 16 79 393 49 330 4.53e-18 86.3
MsG0580030085.01.T01 MTR_8g101580 24.021 383 232 14 84 450 54 393 5.06e-18 86.3
MsG0580030085.01.T01 MTR_3g058480 28.526 312 171 15 84 377 47 324 5.20e-18 85.5
MsG0580030085.01.T01 MTR_3g014570 26.136 352 207 17 79 420 32 340 5.40e-18 85.9
MsG0580030085.01.T01 MTR_3g007360 27.019 322 180 13 84 393 60 338 9.64e-18 85.5
MsG0580030085.01.T01 MTR_7g056820 26.273 373 226 16 79 430 10 354 1.09e-17 85.1
MsG0580030085.01.T01 MTR_4g094400 42.982 114 45 3 295 392 3 112 1.20e-17 79.7
MsG0580030085.01.T01 MTR_2g046920 25.323 387 234 17 78 450 26 371 1.20e-17 84.7
MsG0580030085.01.T01 MTR_2g028110 24.451 364 220 12 84 430 12 337 1.31e-17 84.7
MsG0580030085.01.T01 MTR_2g021252 25.000 344 207 13 79 420 50 344 1.46e-17 84.7
MsG0580030085.01.T01 MTR_1g037540 25.305 328 172 15 79 364 8 304 2.34e-17 84.3
MsG0580030085.01.T01 MTR_1g068860 24.309 362 217 11 84 427 12 334 4.81e-17 83.2
MsG0580030085.01.T01 MTR_3g010390 24.695 328 208 14 79 394 36 336 8.91e-17 82.4
MsG0580030085.01.T01 MTR_3g083010 23.398 359 187 14 79 394 9 322 1.22e-16 82.0
MsG0580030085.01.T01 MTR_2g047832 25.500 400 242 16 60 432 10 380 1.93e-16 81.6
MsG0580030085.01.T01 MTR_3g006670 27.746 346 210 17 79 420 52 361 2.16e-16 81.3
MsG0580030085.01.T01 MTR_4g023090 26.163 344 193 14 84 410 24 323 2.51e-16 80.9
MsG0580030085.01.T01 MTR_0128s0020 22.970 431 255 16 60 453 5 395 3.48e-16 80.5
MsG0580030085.01.T01 MTR_3g007430 24.000 325 185 13 84 393 51 328 3.66e-16 80.5
MsG0580030085.01.T01 MTR_2g426090 24.870 386 224 16 84 439 14 363 4.38e-16 80.5
MsG0580030085.01.T01 MTR_5g070080 24.870 386 248 16 84 452 18 378 4.59e-16 80.1
MsG0580030085.01.T01 MTR_3g030350 22.093 344 225 15 79 420 38 340 4.66e-16 80.1
MsG0580030085.01.T01 MTR_3g024110 24.857 350 203 13 79 420 104 401 5.62e-16 80.5
MsG0580030085.01.T01 MTR_0667s0010 24.625 333 188 13 84 393 14 306 5.97e-16 80.1
MsG0580030085.01.T01 MTR_5g096050 46.000 100 43 4 302 391 1 99 6.70e-16 74.3
MsG0580030085.01.T01 MTR_6g055210 23.529 425 255 17 78 456 24 424 7.34e-16 80.1
MsG0580030085.01.T01 MTR_6g016285 24.471 425 250 19 78 456 23 422 7.58e-16 80.1
MsG0580030085.01.T01 MTR_2g021155 24.802 379 221 17 79 438 39 372 8.23e-16 80.9
MsG0580030085.01.T01 MTR_4g024890 23.096 407 244 15 78 450 12 383 1.14e-15 79.0
MsG0580030085.01.T01 MTR_1g097330 23.989 371 231 15 78 436 18 349 1.41e-15 79.0
MsG0580030085.01.T01 MTR_4g117770 25.635 394 234 15 75 452 10 360 1.49e-15 78.6
MsG0580030085.01.T01 MTR_4g117810 25.635 394 234 15 75 452 10 360 1.49e-15 78.6
MsG0580030085.01.T01 MTR_1g442850 27.326 344 175 19 85 399 14 311 1.87e-15 78.2
MsG0580030085.01.T01 MTR_3g036430 23.121 346 195 14 79 422 23 299 2.41e-15 77.4
MsG0580030085.01.T01 MTR_1g050305 53.012 83 33 3 359 435 21 103 3.43e-15 73.2
MsG0580030085.01.T01 MTR_2g028130 23.167 341 225 11 79 404 8 326 3.51e-15 77.8
MsG0580030085.01.T01 MTR_4g019990 22.087 412 252 20 78 451 8 388 4.29e-15 77.4
MsG0580030085.01.T01 MTR_4g117780 25.515 388 234 14 79 452 14 360 4.33e-15 77.0
MsG0580030085.01.T01 MTR_2g021050 24.451 364 212 14 84 430 13 330 5.06e-15 77.0
MsG0580030085.01.T01 MTR_7g056290 25.070 355 216 14 78 409 24 351 6.87e-15 77.0
MsG0580030085.01.T01 MTR_2g028140 22.512 422 220 20 84 452 13 380 6.99e-15 76.6
MsG0580030085.01.T01 MTR_8g062660 23.430 414 232 16 84 463 30 392 7.31e-15 77.4
MsG0580030085.01.T01 MTR_6g087660 40.517 116 65 3 62 174 3 117 8.47e-15 73.2
MsG0580030085.01.T01 MTR_7g061050 25.553 407 218 19 84 450 21 382 9.50e-15 76.3
MsG0580030085.01.T01 MTR_4g023130 25.597 293 174 11 174 452 44 306 1.07e-14 75.1
MsG0580030085.01.T01 MTR_2g025960 24.336 226 136 7 187 393 6 215 1.19e-14 75.1
MsG0580030085.01.T01 MTR_3g010430 23.936 376 206 19 79 430 39 358 1.22e-14 76.3
MsG0580030085.01.T01 MTR_4g080200 28.807 243 129 9 78 312 5 211 1.29e-14 75.5
MsG0580030085.01.T01 MTR_5g034080 79.545 44 9 0 1 44 1 44 1.48e-14 68.6
MsG0580030085.01.T01 MTR_3g036335 24.857 350 212 19 79 420 44 350 2.34e-14 75.1
MsG0580030085.01.T01 MTR_7g060940 25.313 399 244 16 78 451 24 393 3.09e-14 74.7
MsG0580030085.01.T01 MTR_5g048160 23.500 400 256 16 84 454 12 390 3.61e-14 74.3
MsG0580030085.01.T01 MTR_7g050480 25.659 417 220 21 78 453 24 391 4.75e-14 73.9
MsG0580030085.01.T01 MTR_7g056390 22.946 353 226 10 78 409 20 347 4.84e-14 74.3
MsG0580030085.01.T01 MTR_2g078870 25.283 265 152 15 163 420 36 261 4.95e-14 73.2
MsG0580030085.01.T01 MTR_3g007270 25.212 353 219 15 79 420 50 368 6.00e-14 73.9
MsG0580030085.01.T01 MTR_4g055060 24.924 329 193 11 79 393 33 321 8.53e-14 73.2
MsG0580030085.01.T01 MTR_1g097490 23.174 397 261 14 59 450 32 389 8.55e-14 73.2
MsG0580030085.01.T01 MTR_7g098020 72.917 48 13 0 1 48 1 48 8.83e-14 66.2
MsG0580030085.01.T01 MTR_3g006530 22.753 356 219 16 79 422 43 354 1.03e-13 73.2
MsG0580030085.01.T01 MTR_8g032390 24.934 377 215 16 84 450 48 366 1.24e-13 72.8
MsG0580030085.01.T01 MTR_3g102110 72.727 44 12 0 1 44 1 44 1.28e-13 65.9
MsG0580030085.01.T01 MTR_4g030090 25.627 359 202 14 58 393 3 319 1.30e-13 72.8
MsG0580030085.01.T01 MTR_2g008340 70.833 48 14 0 1 48 1 48 1.30e-13 65.9
MsG0580030085.01.T01 MTR_2g031680 24.112 394 218 15 84 452 14 351 1.45e-13 72.4
MsG0580030085.01.T01 MTR_7g055870 22.464 414 248 15 77 436 14 408 1.51e-13 72.8
MsG0580030085.01.T01 MTR_3g030250 22.475 396 243 16 79 469 40 376 1.53e-13 72.4
MsG0580030085.01.T01 MTR_6g053240 25.155 322 188 14 84 391 36 318 1.79e-13 72.4
MsG0580030085.01.T01 MTR_2g078850 24.079 353 209 18 79 420 33 337 1.89e-13 72.0
MsG0580030085.01.T01 MTR_1g068905 22.340 376 185 14 84 452 12 287 2.14e-13 71.2
MsG0580030085.01.T01 MTR_7g066840 24.311 399 249 16 78 450 25 396 2.19e-13 72.0
MsG0580030085.01.T01 MTR_2g080970 81.081 37 7 0 1 37 1 37 2.46e-13 65.1
MsG0580030085.01.T01 MTR_7g061090 23.317 416 238 19 78 445 24 406 2.58e-13 72.0
MsG0580030085.01.T01 MTR_3g009260 24.110 365 221 15 36 393 3 318 3.32e-13 71.6
MsG0580030085.01.T01 MTR_7g028660 22.500 400 252 16 78 452 13 379 3.50e-13 71.2
MsG0580030085.01.T01 MTR_2g425980 22.014 427 233 16 79 460 8 379 3.53e-13 71.6
MsG0580030085.01.T01 MTR_1g055375 25.538 325 197 17 79 393 7 296 3.93e-13 71.2
MsG0580030085.01.T01 MTR_2g021190 23.714 350 218 18 79 420 24 332 4.93e-13 70.9
MsG0580030085.01.T01 MTR_7g024360 68.750 48 15 0 1 48 1 48 5.76e-13 63.9
MsG0580030085.01.T01 MTR_5g070130 23.645 406 250 14 68 452 3 369 6.45e-13 70.5
MsG0580030085.01.T01 MTR_7g007300 24.365 394 221 18 79 450 106 444 7.00e-13 70.9
MsG0580030085.01.T01 MTR_6g042730 73.333 45 12 0 1 45 1 45 7.39e-13 63.9
MsG0580030085.01.T01 MTR_5g057690 25.868 317 178 14 84 393 54 320 7.85e-13 70.5
MsG0580030085.01.T01 MTR_8g073350 68.750 48 15 0 1 48 1 48 9.96e-13 63.5
MsG0580030085.01.T01 MTR_1004s0010 26.991 226 132 10 163 388 95 287 1.04e-12 69.7
MsG0580030085.01.T01 MTR_5g057040 31.609 174 95 6 79 246 49 204 1.07e-12 70.9
MsG0580030085.01.T01 MTR_6g048120 24.438 356 217 17 79 420 39 356 1.11e-12 70.1
MsG0580030085.01.T01 MTR_2g028160 24.079 353 205 16 79 402 8 326 1.13e-12 70.1
MsG0580030085.01.T01 MTR_1g050542 25.377 398 235 20 41 425 28 376 1.18e-12 69.7
MsG0580030085.01.T01 MTR_6g007135 24.167 360 216 18 79 420 29 349 1.32e-12 69.7
MsG0580030085.01.T01 MTR_4g107820 25.000 392 230 17 78 450 38 384 1.36e-12 69.7
MsG0580030085.01.T01 MTR_4g107780 25.000 392 230 17 78 450 38 384 1.36e-12 69.7
MsG0580030085.01.T01 MTR_3g011020 26.934 349 189 15 84 420 36 330 1.36e-12 69.3
MsG0580030085.01.T01 MTR_4g107820 25.000 392 230 17 78 450 38 384 1.44e-12 69.7
MsG0580030085.01.T01 MTR_4g107780 25.000 392 230 17 78 450 38 384 1.57e-12 69.7
MsG0580030085.01.T01 MTR_8g073550 27.854 219 121 8 79 290 33 221 1.87e-12 67.4
MsG0580030085.01.T01 MTR_7g117020 75.000 44 11 0 1 44 1 44 2.02e-12 62.4
MsG0580030085.01.T01 MTR_4g122850 24.495 396 219 19 87 452 12 357 2.04e-12 68.9
MsG0580030085.01.T01 MTR_2g047892 20.936 406 254 14 78 450 24 395 2.37e-12 68.9
MsG0580030085.01.T01 MTR_1g009110 23.497 366 225 13 66 412 4 333 2.84e-12 68.6
MsG0580030085.01.T01 MTR_3g007330 23.988 321 184 13 84 393 56 327 3.21e-12 68.6
MsG0580030085.01.T01 MTR_7g061060 24.416 385 221 17 84 434 21 369 3.49e-12 68.6
MsG0580030085.01.T01 MTR_5g094360 38.710 124 62 6 211 329 40 154 3.66e-12 64.7
MsG0580030085.01.T01 MTR_2g024100 28.182 220 126 11 189 392 106 309 3.66e-12 68.2
MsG0580030085.01.T01 MTR_7g070830 24.242 429 239 21 78 451 23 420 3.70e-12 68.6
MsG0580030085.01.T01 MTR_3g099410 68.750 48 15 0 1 48 1 48 4.62e-12 61.6
MsG0580030085.01.T01 MTR_4g054770 66.667 48 16 0 1 48 1 48 7.45e-12 60.8
MsG0580030085.01.T01 MTR_5g068040 22.137 393 216 15 77 430 17 358 7.54e-12 67.4
MsG0580030085.01.T01 MTR_2g426020 23.853 327 209 14 79 393 9 307 8.19e-12 67.4
MsG0580030085.01.T01 MTR_5g022980 66.667 48 16 0 1 48 1 48 8.38e-12 60.8
MsG0580030085.01.T01 MTR_5g070088 24.121 398 239 15 84 452 15 378 9.19e-12 67.0
MsG0580030085.01.T01 MTR_4g117720 25.000 296 186 11 177 457 101 375 9.60e-12 67.0
MsG0580030085.01.T01 MTR_3g047540 41.558 77 35 2 267 343 2 68 9.77e-12 61.6
MsG0580030085.01.T01 MTR_1g079880 66.667 48 16 0 1 48 1 48 9.80e-12 60.5
MsG0580030085.01.T01 MTR_7g055930 22.410 415 247 16 77 436 14 408 9.99e-12 67.0
MsG0580030085.01.T01 MTR_3g030240 22.443 352 200 18 79 420 43 331 1.10e-11 66.6
MsG0580030085.01.T01 MTR_3g036290 22.741 343 215 15 79 420 25 318 1.34e-11 66.2
MsG0580030085.01.T01 MTR_4g061190 66.667 48 16 0 1 48 1 48 1.37e-11 60.1
MsG0580030085.01.T01 MTR_4g023190 25.441 397 230 19 70 450 4 350 1.52e-11 66.2
MsG0580030085.01.T01 MTR_5g088870 66.667 48 16 0 1 48 1 48 1.57e-11 60.1
MsG0580030085.01.T01 MTR_5g057020 25.926 324 174 14 79 393 49 315 1.83e-11 65.9
MsG0580030085.01.T01 MTR_7g013590 23.077 390 243 14 79 449 39 390 1.89e-11 66.2
MsG0580030085.01.T01 MTR_4g023150 25.815 399 227 20 70 450 4 351 1.91e-11 65.9
MsG0580030085.01.T01 MTR_3g010970 22.543 346 211 14 79 420 51 343 1.97e-11 65.9
MsG0580030085.01.T01 MTR_3g104610 56.897 58 23 1 1 56 1 58 2.06e-11 59.7
MsG0580030085.01.T01 MTR_7g066030 22.439 410 254 16 78 452 23 403 2.62e-11 65.9
MsG0580030085.01.T01 MTR_7g089240 66.667 48 16 0 1 48 1 48 3.02e-11 59.3
MsG0580030085.01.T01 MTR_3g023930 22.507 351 197 15 79 420 37 321 3.16e-11 65.1
MsG0580030085.01.T01 MTR_3g032420 66.667 48 16 0 1 48 1 48 4.21e-11 58.9
MsG0580030085.01.T01 MTR_2g089610 70.455 44 13 0 1 44 1 44 4.46e-11 58.5
MsG0580030085.01.T01 MTR_2g046830 24.457 368 227 14 78 432 27 356 4.92e-11 64.7
MsG0580030085.01.T01 MTR_6g007150 25.524 286 170 14 187 450 72 336 5.86e-11 64.3
MsG0580030085.01.T01 MTR_4g031770 23.385 325 197 14 79 393 7 289 6.05e-11 64.3
MsG0580030085.01.T01 MTR_4g030110 22.824 425 231 19 56 434 5 378 7.04e-11 64.3
MsG0580030085.01.T01 MTR_3g011650 25.168 298 179 12 22 313 26 285 7.26e-11 63.5
MsG0580030085.01.T01 MTR_7g056760 22.983 409 249 16 78 450 25 403 8.87e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030085.01.T01 AT3G06240 24.818 411 239 16 79 450 39 418 2.53e-21 96.7
MsG0580030085.01.T01 AT2G16810 26.351 296 162 13 66 348 29 281 1.56e-12 68.6
MsG0580030085.01.T01 AT4G12560 24.779 226 141 9 185 394 92 304 6.32e-11 64.7
MsG0580030085.01.T01 AT4G12560 24.779 226 141 9 185 394 92 304 6.32e-11 64.7
MsG0580030085.01.T01 AT4G12560 24.779 226 141 9 185 394 92 304 6.32e-11 64.7
MsG0580030085.01.T01 AT3G10240 24.483 290 172 13 79 364 30 276 9.29e-11 63.9

Find 87 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATATTTAGCCGTGTTAAA+TGG 0.189670 5:-106462636 MsG0580030085.01.T01:CDS
TACAAATTCAACCAATGATT+TGG 0.190340 5:-106464419 None:intergenic
ATGACTCATCTTCATCTTCA+TGG 0.233492 5:-106463014 MsG0580030085.01.T01:CDS
CATCTTCATCTTCATGGATT+TGG 0.246600 5:-106463008 MsG0580030085.01.T01:CDS
CGAAACATGGTCATGAAATA+AGG 0.269364 5:+106463362 None:intergenic
ATCCAAGAGCTTGGTGTTAA+AGG 0.274750 5:-106462405 MsG0580030085.01.T01:CDS
CTCAAATCTTTGAGTCGATT+TGG 0.294584 5:-106463422 MsG0580030085.01.T01:CDS
TATATCTCCCACAAAGAATA+AGG 0.313539 5:+106462891 None:intergenic
ACATGACCGCCCGCTTTATC+TGG 0.314975 5:+106462813 None:intergenic
ACAAATTCAACCAATGATTT+GGG 0.347353 5:-106464418 None:intergenic
CCGACAAACATGAATGATAT+TGG 0.350134 5:-106462663 MsG0580030085.01.T01:CDS
TCAGCTCATTCCCTTGTACT+TGG 0.360936 5:-106463539 MsG0580030085.01.T01:CDS
AGAACATGGTTGAATTAGAT+TGG 0.364159 5:-106463205 MsG0580030085.01.T01:CDS
CATGACATCAAATGGCCTAT+TGG 0.367429 5:-106462504 MsG0580030085.01.T01:CDS
ATTTGTATTGATTATAACTT+TGG 0.369486 5:-106463116 MsG0580030085.01.T01:CDS
ATCCGGAAGCATGTGAATTT+CGG 0.373271 5:-106464381 MsG0580030085.01.T01:CDS
CCAATATCATTCATGTTTGT+CGG 0.382068 5:+106462663 None:intergenic
CTCCTTTAACACCAAGCTCT+TGG 0.387214 5:+106462403 None:intergenic
TCTCTCATGGCGTAGGTTGT+AGG 0.391642 5:+106462933 None:intergenic
AAGATACTCCTTATTCTTTG+TGG 0.392861 5:-106462899 MsG0580030085.01.T01:CDS
TGATCCTGATGAAATAGATT+TGG 0.393125 5:+106463182 None:intergenic
TTTGGGTGAAGTTGGGATGA+AGG 0.397333 5:-106462559 MsG0580030085.01.T01:CDS
AACATTGACACCCAAATCAT+TGG 0.399992 5:+106464408 None:intergenic
GGGTGTCAATGTTGCAGATC+CGG 0.403335 5:-106464398 MsG0580030085.01.T01:CDS
ACTTTGATTTCCTTAGTAGC+TGG 0.407559 5:+106463071 None:intergenic
CTTTGATTTCCTTAGTAGCT+GGG 0.408462 5:+106463072 None:intergenic
CACCGAAATTCACATGCTTC+CGG 0.410984 5:+106464379 None:intergenic
CATGTGAATTTCGGTGACTT+AGG 0.419971 5:-106464372 MsG0580030085.01.T01:CDS
CCATTCTTACCCATTCCAAT+AGG 0.420315 5:+106462489 None:intergenic
TTGGTTGCGTACGTAAATCT+TGG 0.428300 5:-106463403 MsG0580030085.01.T01:CDS
GATATTTAGCCGTGTTAAAT+GGG 0.435364 5:-106462635 MsG0580030085.01.T01:CDS
TGTGGTTATACTAGTGTCAA+TGG 0.438806 5:-106463143 MsG0580030085.01.T01:CDS
AGATACTCCTTATTCTTTGT+GGG 0.440273 5:-106462898 MsG0580030085.01.T01:CDS
TTGGCCAAATCTATTTCATC+AGG 0.442384 5:-106463186 MsG0580030085.01.T01:CDS
TCCTATGTTATGACCGGTCA+TGG 0.452977 5:-106463289 MsG0580030085.01.T01:CDS
TTGAGTTACATGACATCAAA+TGG 0.456273 5:-106462512 MsG0580030085.01.T01:CDS
CATCAAATGGCCTATTGGAA+TGG 0.465088 5:-106462499 MsG0580030085.01.T01:CDS
ATTGTCTACAAAGCAACTCT+TGG 0.465091 5:-106462869 MsG0580030085.01.T01:CDS
ATCAAATGGCCTATTGGAAT+GGG 0.467599 5:-106462498 MsG0580030085.01.T01:CDS
GTGGCACAATTAGTAAATCA+TGG 0.469941 5:-106463259 MsG0580030085.01.T01:CDS
TGAGAAGCAAAAGGACTTGA+AGG 0.473556 5:+106463044 None:intergenic
ATTGTGGAACCCAGCTACTA+AGG 0.478877 5:-106463081 MsG0580030085.01.T01:CDS
TGATATATTCTTTATAAAAG+AGG 0.490672 5:-106462466 MsG0580030085.01.T01:CDS
TGTATTGATTATAACTTTGG+AGG 0.492270 5:-106463113 MsG0580030085.01.T01:CDS
AGTCAAAAGGCAGAAATCAC+TGG 0.496747 5:-106463516 MsG0580030085.01.T01:CDS
ACTGGCCGCTACTGATGAAA+AGG 0.500639 5:-106463498 MsG0580030085.01.T01:CDS
ACATGGATGGAGTGTGTCAT+TGG 0.502672 5:-106462788 MsG0580030085.01.T01:CDS
AAGTTGGGATGAAGGAATCA+TGG 0.515069 5:-106462551 MsG0580030085.01.T01:CDS
CTCTATTCCTATGTTATGAC+CGG 0.517803 5:-106463295 MsG0580030085.01.T01:CDS
TTCTCAGATAATAACTTACA+AGG 0.519320 5:-106462373 MsG0580030085.01.T01:CDS
TGGAGAGAGATTTGAGAACA+TGG 0.519633 5:-106463219 MsG0580030085.01.T01:CDS
CCCTTGTACTTGGAGTCAAA+AGG 0.521346 5:-106463529 MsG0580030085.01.T01:CDS
TTTCCAAGTCCGATCTCTCA+TGG 0.521797 5:+106462920 None:intergenic
CTCAAGTTAATAGCATAAAA+CGG 0.526050 5:+106464321 None:intergenic
TGGCACAATTAGTAAATCAT+GGG 0.528454 5:-106463258 MsG0580030085.01.T01:CDS
CGCAATTGACCCATTTAACA+CGG 0.533466 5:+106462626 None:intergenic
CAACCTACGCCATGAGAGAT+CGG 0.537341 5:-106462929 MsG0580030085.01.T01:CDS
ACGCCATGAGAGATCGGACT+TGG 0.541215 5:-106462923 MsG0580030085.01.T01:CDS
CAAGGGAATGAGCTGAGAGA+GGG 0.554412 5:+106463546 None:intergenic
ATGGAAGGTTGAGAAGCAAA+AGG 0.557613 5:+106463035 None:intergenic
TGCCACTGTCAATCCATGAC+CGG 0.558089 5:+106463276 None:intergenic
ATTTCATGACCATGTTTCGA+AGG 0.558760 5:-106463358 MsG0580030085.01.T01:CDS
GTATTGATTATAACTTTGGA+GGG 0.570458 5:-106463112 MsG0580030085.01.T01:CDS
GGCGGTCATGTATACATGGA+TGG 0.572124 5:-106462801 MsG0580030085.01.T01:CDS
ATGAAGATGAAGATGAGTCA+TGG 0.573259 5:+106463016 None:intergenic
AGCGGGCGGTCATGTATACA+TGG 0.578035 5:-106462805 MsG0580030085.01.T01:CDS
GCTTTATCTGGAGAACATGC+AGG 0.578222 5:+106462825 None:intergenic
CCTATTGGAATGGGTAAGAA+TGG 0.584108 5:-106462489 MsG0580030085.01.T01:CDS
TAAGAAATTCCTTCGAAACA+TGG 0.593577 5:+106463349 None:intergenic
AGTCCGATCTCTCATGGCGT+AGG 0.597947 5:+106462926 None:intergenic
GCATGTTCTCCAGATAAAGC+GGG 0.601014 5:-106462822 MsG0580030085.01.T01:CDS
ACAAGGGAATGAGCTGAGAG+AGG 0.601618 5:+106463545 None:intergenic
TTGGAGGGAGAGTTGCATTG+TGG 0.602461 5:-106463097 MsG0580030085.01.T01:CDS
TCCATGACCGGTCATAACAT+AGG 0.605972 5:+106463288 None:intergenic
ACACAAAGGATCCAAGAGCT+TGG 0.607447 5:-106462414 MsG0580030085.01.T01:CDS
TGCATGTTCTCCAGATAAAG+CGG 0.613674 5:-106462823 MsG0580030085.01.T01:CDS
AATCGACTCAAAGATTTGAG+AGG 0.645476 5:+106463425 None:intergenic
GGATTTGGTTATGACCACGT+TGG 0.645907 5:-106462993 MsG0580030085.01.T01:CDS
AACTTACAAGGAAAGCCTTG+TGG 0.658601 5:-106462361 MsG0580030085.01.T01:CDS
ACTATAATTTAAGTACACAA+AGG 0.662689 5:-106462428 MsG0580030085.01.T01:CDS
AGATGAAGATGAGTCATGGA+AGG 0.684369 5:+106463020 None:intergenic
GGCACAATTAGTAAATCATG+GGG 0.692624 5:-106463257 MsG0580030085.01.T01:CDS
GACCGGTCATGGATTGACAG+TGG 0.710589 5:-106463278 MsG0580030085.01.T01:CDS
TGTTCTCCAGATAAAGCGGG+CGG 0.720778 5:-106462819 MsG0580030085.01.T01:CDS
TGTTGTAACAAACATCTCAG+TGG 0.722537 5:+106462692 None:intergenic
TAACTCAAGAGTGAAGAGTG+TGG 0.730599 5:+106462527 None:intergenic
GTTTATAGTTATCTCCAACG+TGG 0.759525 5:+106462979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACAATAAATTTAATTTAGT+GGG + Chr5:106462642-106462661 None:intergenic 10.0%
!! AAAAAAAAAAAAGAGTTTAG+TGG - Chr5:106462510-106462529 MsG0580030085.01.T01:CDS 15.0%
!! AACATTAAAGAAAATTTGAT+TGG + Chr5:106463093-106463112 None:intergenic 15.0%
!! TAAAAAAAATCTTATAAAGG+TGG + Chr5:106462953-106462972 None:intergenic 15.0%
!! TGATATATTCTTTATAAAAG+AGG - Chr5:106464238-106464257 MsG0580030085.01.T01:intron 15.0%
!!! ACAATAAATTTAATTTAGTG+GGG + Chr5:106462641-106462660 None:intergenic 15.0%
!!! ATTTGTATTGATTATAACTT+TGG - Chr5:106463588-106463607 MsG0580030085.01.T01:intron 15.0%
!!! CTACAATAAATTTAATTTAG+TGG + Chr5:106462643-106462662 None:intergenic 15.0%
!!! CTTGAAAGAAAATTTATTTT+TGG - Chr5:106462665-106462684 MsG0580030085.01.T01:CDS 15.0%
!!! TAACCACAAATTTTAAAATA+AGG + Chr5:106463549-106463568 None:intergenic 15.0%
!!! TTTGTTTGAAATCTTAATTT+AGG - Chr5:106463033-106463052 MsG0580030085.01.T01:CDS 15.0%
!! ACTATAATTTAAGTACACAA+AGG - Chr5:106464276-106464295 MsG0580030085.01.T01:intron 20.0%
!! TTAATGTTACACTTGAATTA+GGG - Chr5:106463105-106463124 MsG0580030085.01.T01:CDS 20.0%
!! TTTAATGTTACACTTGAATT+AGG - Chr5:106463104-106463123 MsG0580030085.01.T01:CDS 20.0%
!!! AACTTTTCACATATCAATTT+TGG - Chr5:106464127-106464146 MsG0580030085.01.T01:intron 20.0%
!!! AATCAATTTGTTTCAAATTG+GGG - Chr5:106462607-106462626 MsG0580030085.01.T01:CDS 20.0%
!!! AATTTTTTCAACTATTTCAG+CGG + Chr5:106462754-106462773 None:intergenic 20.0%
!!! ACTTTTCACATATCAATTTT+GGG - Chr5:106464128-106464147 MsG0580030085.01.T01:intron 20.0%
!!! ATCATTTTTAAAGTTGACTT+TGG - Chr5:106462718-106462737 MsG0580030085.01.T01:CDS 20.0%
!!! CAACCTTATTTTAAAATTTG+TGG - Chr5:106463543-106463562 MsG0580030085.01.T01:CDS 20.0%
!!! CAATAAATTTAATTTAGTGG+GGG + Chr5:106462640-106462659 None:intergenic 20.0%
!!! GAATCAATTTGTTTCAAATT+GGG - Chr5:106462606-106462625 MsG0580030085.01.T01:CDS 20.0%
!!! GGTTTTATCATATTATTTGT+AGG - Chr5:106462353-106462372 MsG0580030085.01.T01:CDS 20.0%
!!! TCTTCTTATTTTTACATTAG+AGG - Chr5:106464398-106464417 MsG0580030085.01.T01:CDS 20.0%
!!! TGAATCAATTTGTTTCAAAT+TGG - Chr5:106462605-106462624 MsG0580030085.01.T01:CDS 20.0%
!!! TTTCTCTACAATAAATTTTG+TGG - Chr5:106462776-106462795 MsG0580030085.01.T01:CDS 20.0%
! AAACATCGCTAAAAACATAA+AGG + Chr5:106462435-106462454 None:intergenic 25.0%
! AACAATGCATAATATATGCA+AGG + Chr5:106462870-106462889 None:intergenic 25.0%
! AACATCGCTAAAAACATAAA+GGG + Chr5:106462434-106462453 None:intergenic 25.0%
! ACAATGCATAATATATGCAA+GGG + Chr5:106462869-106462888 None:intergenic 25.0%
! CTCAAGTTAATAGCATAAAA+CGG + Chr5:106462386-106462405 None:intergenic 25.0%
! TTCTCAGATAATAACTTACA+AGG - Chr5:106464331-106464350 MsG0580030085.01.T01:CDS 25.0%
!! ATTGATTCATCTATGTATAG+TGG + Chr5:106462594-106462613 None:intergenic 25.0%
!!! AATCTTATAAAGGTGGATTA+TGG + Chr5:106462946-106462965 None:intergenic 25.0%
!!! CAATTTTGATAGAACAAAGA+AGG + Chr5:106463259-106463278 None:intergenic 25.0%
!!! GTATTGATTATAACTTTGGA+GGG - Chr5:106463592-106463611 MsG0580030085.01.T01:intron 25.0%
!!! TGTATTGATTATAACTTTGG+AGG - Chr5:106463591-106463610 MsG0580030085.01.T01:intron 25.0%
AAGATACTCCTTATTCTTTG+TGG - Chr5:106463805-106463824 MsG0580030085.01.T01:intron 30.0%
AGAACATGGTTGAATTAGAT+TGG - Chr5:106463499-106463518 MsG0580030085.01.T01:CDS 30.0%
AGATACTCCTTATTCTTTGT+GGG - Chr5:106463806-106463825 MsG0580030085.01.T01:intron 30.0%
AGATATTTAGCCGTGTTAAA+TGG - Chr5:106464068-106464087 MsG0580030085.01.T01:intron 30.0%
CAATGCATAATATATGCAAG+GGG + Chr5:106462868-106462887 None:intergenic 30.0%
CCAATATCATTCATGTTTGT+CGG + Chr5:106464044-106464063 None:intergenic 30.0%
GATATTTAGCCGTGTTAAAT+GGG - Chr5:106464069-106464088 MsG0580030085.01.T01:intron 30.0%
TAAGAAATTCCTTCGAAACA+TGG + Chr5:106463358-106463377 None:intergenic 30.0%
TATATCTCCCACAAAGAATA+AGG + Chr5:106463816-106463835 None:intergenic 30.0%
TGATCCTGATGAAATAGATT+TGG + Chr5:106463525-106463544 None:intergenic 30.0%
TGGCACAATTAGTAAATCAT+GGG - Chr5:106463446-106463465 MsG0580030085.01.T01:CDS 30.0%
TTGAGTTACATGACATCAAA+TGG - Chr5:106464192-106464211 MsG0580030085.01.T01:intron 30.0%
! AATTTAGGTGTGACTGTTTT+GGG - Chr5:106463048-106463067 MsG0580030085.01.T01:CDS 30.0%
! ATCTATGTATAGTGGAGTAT+GGG + Chr5:106462586-106462605 None:intergenic 30.0%
! TAATTTAGGTGTGACTGTTT+TGG - Chr5:106463047-106463066 MsG0580030085.01.T01:CDS 30.0%
! TTTTTCTTTCAATCACCACA+AGG + Chr5:106464361-106464380 None:intergenic 30.0%
!! ATAAAGGTGGATTATGGATT+TGG + Chr5:106462940-106462959 None:intergenic 30.0%
!! ATATCAATTTTGGGTGAAGT+TGG - Chr5:106464137-106464156 MsG0580030085.01.T01:intron 30.0%
!! TATCAATTTTGGGTGAAGTT+GGG - Chr5:106464138-106464157 MsG0580030085.01.T01:intron 30.0%
ATCAAATGGCCTATTGGAAT+GGG - Chr5:106464206-106464225 MsG0580030085.01.T01:intron 35.0%
ATGAAGATGAAGATGAGTCA+TGG + Chr5:106463691-106463710 None:intergenic 35.0%
ATGACTCATCTTCATCTTCA+TGG - Chr5:106463690-106463709 MsG0580030085.01.T01:intron 35.0%
ATTGTCTACAAAGCAACTCT+TGG - Chr5:106463835-106463854 MsG0580030085.01.T01:intron 35.0%
ATTTCATGACCATGTTTCGA+AGG - Chr5:106463346-106463365 MsG0580030085.01.T01:CDS 35.0%
CATCTTCATCTTCATGGATT+TGG - Chr5:106463696-106463715 MsG0580030085.01.T01:intron 35.0%
CCGACAAACATGAATGATAT+TGG - Chr5:106464041-106464060 MsG0580030085.01.T01:intron 35.0%
CGAAACATGGTCATGAAATA+AGG + Chr5:106463345-106463364 None:intergenic 35.0%
CTCAAATCTTTGAGTCGATT+TGG - Chr5:106463282-106463301 MsG0580030085.01.T01:CDS 35.0%
CTCTATTCCTATGTTATGAC+CGG - Chr5:106463409-106463428 MsG0580030085.01.T01:CDS 35.0%
GGCACAATTAGTAAATCATG+GGG - Chr5:106463447-106463466 MsG0580030085.01.T01:CDS 35.0%
GTGGCACAATTAGTAAATCA+TGG - Chr5:106463445-106463464 MsG0580030085.01.T01:CDS 35.0%
GTTTATAGTTATCTCCAACG+TGG + Chr5:106463728-106463747 None:intergenic 35.0%
TGTGGTTATACTAGTGTCAA+TGG - Chr5:106463561-106463580 MsG0580030085.01.T01:CDS 35.0%
TGTTACACTTGAATTAGGGT+TGG - Chr5:106463109-106463128 MsG0580030085.01.T01:CDS 35.0%
TGTTGTAACAAACATCTCAG+TGG + Chr5:106464015-106464034 None:intergenic 35.0%
TTGGCCAAATCTATTTCATC+AGG - Chr5:106463518-106463537 MsG0580030085.01.T01:CDS 35.0%
! AATCGACTCAAAGATTTGAG+AGG + Chr5:106463282-106463301 None:intergenic 35.0%
! ACTTTGATTTCCTTAGTAGC+TGG + Chr5:106463636-106463655 None:intergenic 35.0%
! CATCTATGTATAGTGGAGTA+TGG + Chr5:106462587-106462606 None:intergenic 35.0%
! CTTTGATTTCCTTAGTAGCT+GGG + Chr5:106463635-106463654 None:intergenic 35.0%
AACTTACAAGGAAAGCCTTG+TGG - Chr5:106464343-106464362 MsG0580030085.01.T01:CDS 40.0%
AAGTTGGGATGAAGGAATCA+TGG - Chr5:106464153-106464172 MsG0580030085.01.T01:intron 40.0%
AGATGAAGATGAGTCATGGA+AGG + Chr5:106463687-106463706 None:intergenic 40.0%
AGTCAAAAGGCAGAAATCAC+TGG - Chr5:106463188-106463207 MsG0580030085.01.T01:CDS 40.0%
ATGGAAGGTTGAGAAGCAAA+AGG + Chr5:106463672-106463691 None:intergenic 40.0%
CATCAAATGGCCTATTGGAA+TGG - Chr5:106464205-106464224 MsG0580030085.01.T01:intron 40.0%
CATGACATCAAATGGCCTAT+TGG - Chr5:106464200-106464219 MsG0580030085.01.T01:intron 40.0%
CATGTGAATTTCGGTGACTT+AGG - Chr5:106462332-106462351 MsG0580030085.01.T01:CDS 40.0%
CCATTCTTACCCATTCCAAT+AGG + Chr5:106464218-106464237 None:intergenic 40.0%
CCTATTGGAATGGGTAAGAA+TGG - Chr5:106464215-106464234 MsG0580030085.01.T01:intron 40.0%
CGCAATTGACCCATTTAACA+CGG + Chr5:106464081-106464100 None:intergenic 40.0%
TAACTCAAGAGTGAAGAGTG+TGG + Chr5:106464180-106464199 None:intergenic 40.0%
TGAGAAGCAAAAGGACTTGA+AGG + Chr5:106463663-106463682 None:intergenic 40.0%
TGCATGTTCTCCAGATAAAG+CGG - Chr5:106463881-106463900 MsG0580030085.01.T01:intron 40.0%
TGGAGAGAGATTTGAGAACA+TGG - Chr5:106463485-106463504 MsG0580030085.01.T01:CDS 40.0%
TTGGTTGCGTACGTAAATCT+TGG - Chr5:106463301-106463320 MsG0580030085.01.T01:CDS 40.0%
! ATCCGGAAGCATGTGAATTT+CGG - Chr5:106462323-106462342 MsG0580030085.01.T01:CDS 40.0%
! GTTGACCTTTTCATCAGTAG+CGG + Chr5:106463214-106463233 None:intergenic 40.0%
!! ATCCAAGAGCTTGGTGTTAA+AGG - Chr5:106464299-106464318 MsG0580030085.01.T01:intron 40.0%
!! CCTTTTGACTCCAAGTACAA+GGG + Chr5:106463178-106463197 None:intergenic 40.0%
ACACAAAGGATCCAAGAGCT+TGG - Chr5:106464290-106464309 MsG0580030085.01.T01:intron 45.0%
ACATGGATGGAGTGTGTCAT+TGG - Chr5:106463916-106463935 MsG0580030085.01.T01:intron 45.0%
ATTGTGGAACCCAGCTACTA+AGG - Chr5:106463623-106463642 MsG0580030085.01.T01:intron 45.0%
CACCGAAATTCACATGCTTC+CGG + Chr5:106462328-106462347 None:intergenic 45.0%
CCCTTGTACTTGGAGTCAAA+AGG - Chr5:106463175-106463194 MsG0580030085.01.T01:CDS 45.0%
CTCCTTTAACACCAAGCTCT+TGG + Chr5:106464304-106464323 None:intergenic 45.0%
GCATGTTCTCCAGATAAAGC+GGG - Chr5:106463882-106463901 MsG0580030085.01.T01:intron 45.0%
GCTTTATCTGGAGAACATGC+AGG + Chr5:106463882-106463901 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+CGG - Chr5:106462892-106462911 MsG0580030085.01.T01:CDS 45.0%
TCAGCTCATTCCCTTGTACT+TGG - Chr5:106463165-106463184 MsG0580030085.01.T01:CDS 45.0%
TCCATGACCGGTCATAACAT+AGG + Chr5:106463419-106463438 None:intergenic 45.0%
TCCTATGTTATGACCGGTCA+TGG - Chr5:106463415-106463434 MsG0580030085.01.T01:CDS 45.0%
TTTCCAAGTCCGATCTCTCA+TGG + Chr5:106463787-106463806 None:intergenic 45.0%
TTTGGGTGAAGTTGGGATGA+AGG - Chr5:106464145-106464164 MsG0580030085.01.T01:intron 45.0%
! GGATTTGGTTATGACCACGT+TGG - Chr5:106463711-106463730 MsG0580030085.01.T01:intron 45.0%
! TGGGGCGTGTTTTCTCTTTT+TGG - Chr5:106463465-106463484 MsG0580030085.01.T01:CDS 45.0%
!! GCCTTTTGACTCCAAGTACA+AGG + Chr5:106463179-106463198 None:intergenic 45.0%
!! ATATAAAAAAAATCTTATAA+AGG + Chr5:106462956-106462975 None:intergenic 5.0%
!!! AAAATCTATTTTTTTTTTTA+GGG + Chr5:106463005-106463024 None:intergenic 5.0%
!!! TAAAATCTATTTTTTTTTTT+AGG + Chr5:106463006-106463025 None:intergenic 5.0%
ACAAGGGAATGAGCTGAGAG+AGG + Chr5:106463162-106463181 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG - Chr5:106462893-106462912 MsG0580030085.01.T01:CDS 50.0%
ACTGGCCGCTACTGATGAAA+AGG - Chr5:106463206-106463225 MsG0580030085.01.T01:CDS 50.0%
CAACCTACGCCATGAGAGAT+CGG - Chr5:106463775-106463794 MsG0580030085.01.T01:intron 50.0%
CAAGGGAATGAGCTGAGAGA+GGG + Chr5:106463161-106463180 None:intergenic 50.0%
GGCGGTCATGTATACATGGA+TGG - Chr5:106463903-106463922 MsG0580030085.01.T01:intron 50.0%
GGGTGTCAATGTTGCAGATC+CGG - Chr5:106462306-106462325 MsG0580030085.01.T01:CDS 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + Chr5:106462893-106462912 None:intergenic 50.0%
TCTCTCATGGCGTAGGTTGT+AGG + Chr5:106463774-106463793 None:intergenic 50.0%
TGCCACTGTCAATCCATGAC+CGG + Chr5:106463431-106463450 None:intergenic 50.0%
TGTTCTCCAGATAAAGCGGG+CGG - Chr5:106463885-106463904 MsG0580030085.01.T01:intron 50.0%
TTGGAGGGAGAGTTGCATTG+TGG - Chr5:106463607-106463626 MsG0580030085.01.T01:intron 50.0%
ACATGACCGCCCGCTTTATC+TGG + Chr5:106463894-106463913 None:intergenic 55.0%
ACGCCATGAGAGATCGGACT+TGG - Chr5:106463781-106463800 MsG0580030085.01.T01:intron 55.0%
AGCGGGCGGTCATGTATACA+TGG - Chr5:106463899-106463918 MsG0580030085.01.T01:intron 55.0%
AGTCCGATCTCTCATGGCGT+AGG + Chr5:106463781-106463800 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+GGG - Chr5:106462894-106462913 MsG0580030085.01.T01:CDS 55.0%
! GACCGGTCATGGATTGACAG+TGG - Chr5:106463426-106463445 MsG0580030085.01.T01:CDS 55.0%
CCCCGTGAGCTTAGCTCAGT+TGG + Chr5:106462897-106462916 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 106462299 106464427 106462299 ID=MsG0580030085.01;Name=MsG0580030085.01
Chr5 mRNA 106462299 106464427 106462299 ID=MsG0580030085.01.T01;Parent=MsG0580030085.01;Name=MsG0580030085.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0|0|0.5|1|1|2|0|470
Chr5 exon 106464317 106464427 106464317 ID=MsG0580030085.01.T01:exon:17232;Parent=MsG0580030085.01.T01
Chr5 exon 106462299 106463600 106462299 ID=MsG0580030085.01.T01:exon:17231;Parent=MsG0580030085.01.T01
Chr5 CDS 106464317 106464427 106464317 ID=MsG0580030085.01.T01:cds;Parent=MsG0580030085.01.T01
Chr5 CDS 106462299 106463600 106462299 ID=MsG0580030085.01.T01:cds;Parent=MsG0580030085.01.T01
Gene Sequence

>MsG0580030085.01.T01

ATGATTTGGGTGTCAATGTTGCAGATCCGGAAGCATGTGAATTTCGGTGACTTAGGTTTTATCATATTATTTGTAGGCATTTTGCCGTTTTATGCTATTAACTTGAGTGCTGGTTGGCTTCAGAAAGATTCTCTCAACTCATTCCCTCTCTCAGCTCATTCCCTTGTACTTGGAGTCAAAAGGCAGAAATCACTGGCCGCTACTGATGAAAAGGTCAACAATCATGCACACGACGATATTGCCTTCTTTGTTCTATCAAAATTGCCTCTCAAATCTTTGAGTCGATTTGGTTGCGTACGTAAATCTTGGTCTTTCTTGTTAGAAAATCCTTATTTCATGACCATGTTTCGAAGGAATTTCTTACGTAAAAATCATTCTTATTACAATGATACATCTCTATTCCTATGTTATGACCGGTCATGGATTGACAGTGGCACAATTAGTAAATCATGGGGCGTGTTTTCTCTTTTTGGAGAGAGATTTGAGAACATGGTTGAATTAGATTGGCCAAATCTATTTCATCAGGATCAACCTTATTTTAAAATTTGTGGTTATACTAGTGTCAATGGCATTATTTGTATTGATTATAACTTTGGAGGGAGAGTTGCATTGTGGAACCCAGCTACTAAGGAAATCAAAGTCATTCCTTCAAGTCCTTTTGCTTCTCAACCTTCCATGACTCATCTTCATCTTCATGGATTTGGTTATGACCACGTTGGAGATAACTATAAACTGATTCGACAAGCAATATTTTCTCCTACAACCTACGCCATGAGAGATCGGACTTGGAAAGATACTCCTTATTCTTTGTGGGAGATATATTGTCTACAAAGCAACTCTTGGAGAAAGCTTCATGTAGATATGCCTGCATGTTCTCCAGATAAAGCGGGCGGTCATGTATACATGGATGGAGTGTGTCATTGGTTGAGTAAAAGTAAAACACATGTTTATCATTATGAAACATACAATGAAAATTATCTTGTGTCATTTAACTTGACCACTGAGATGTTTGTTACAACATCTATACCGACAAACATGAATGATATTGGTTATAGATATTTAGCCGTGTTAAATGGGTCAATTGCGTTGATTTCAAATTTTGCTAATGCAACAACTTTTCACATATCAATTTTGGGTGAAGTTGGGATGAAGGAATCATGGACCACACTCTTCACTCTTGAGTTACATGACATCAAATGGCCTATTGGAATGGGTAAGAATGGTGATATATTCTTTATAAAAGAGGACGACGAACTAATTCACTATAATTTAAGTACACAAAGGATCCAAGAGCTTGGTGTTAAAGGAGATTATTATTCTCAGATAATAACTTACAAGGAAAGCCTTGTGGTGATTGAAAGAAAAAGTAACTTATCATTTACTTCTTCTTATTTTTACATTAGAGGTACATGA
Protein sequence

>MsG0580030085.01.T01

MIWVSMLQIRKHVNFGDLGFIILFVGILPFYAINLSAGWLQKDSLNSFPLSAHSLVLGVKRQKSLAATDEKVNNHAHDDIAFFVLSKLPLKSLSRFGCVRKSWSFLLENPYFMTMFRRNFLRKNHSYYNDTSLFLCYDRSWIDSGTISKSWGVFSLFGERFENMVELDWPNLFHQDQPYFKICGYTSVNGIICIDYNFGGRVALWNPATKEIKVIPSSPFASQPSMTHLHLHGFGYDHVGDNYKLIRQAIFSPTTYAMRDRTWKDTPYSLWEIYCLQSNSWRKLHVDMPACSPDKAGGHVYMDGVCHWLSKSKTHVYHYETYNENYLVSFNLTTEMFVTTSIPTNMNDIGYRYLAVLNGSIALISNFANATTFHISILGEVGMKESWTTLFTLELHDIKWPIGMGKNGDIFFIKEDDELIHYNLSTQRIQELGVKGDYYSQIITYKESLVVIERKSNLSFTSSYFYIRGT*