AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030209.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030209.01.T01 MTR_4g102410 50.714 420 186 10 1 416 44 446 4.46e-133 390
MsG0580030209.01.T01 MTR_5g096630 47.926 434 192 9 1 420 1 414 3.33e-130 381
MsG0580030209.01.T01 MTR_0129s0070 52.812 409 164 12 17 420 12 396 4.76e-126 370
MsG0580030209.01.T01 MTR_0129s0120 51.961 408 167 12 17 419 12 395 1.71e-123 363
MsG0580030209.01.T01 MTR_5g097330 49.257 404 184 10 23 420 15 403 3.50e-113 338
MsG0580030209.01.T01 MTR_2g021800 43.678 435 211 11 1 420 1 416 5.12e-110 330
MsG0580030209.01.T01 MTR_8g063440 48.418 411 171 15 17 420 7 383 1.30e-109 328
MsG0580030209.01.T01 MTR_2g022000 45.192 416 201 10 17 418 11 413 4.75e-107 323
MsG0580030209.01.T01 MTR_2g021950 46.556 421 192 11 1 416 1 393 5.68e-107 321
MsG0580030209.01.T01 MTR_2g104340 45.564 417 185 12 17 420 9 396 1.22e-106 321
MsG0580030209.01.T01 MTR_2g038680 44.954 436 179 16 11 417 5 408 5.10e-106 320
MsG0580030209.01.T01 MTR_4g117550 46.714 426 168 15 1 420 1 373 4.12e-103 311
MsG0580030209.01.T01 MTR_0129s0050 43.991 441 193 13 1 420 1 408 9.07e-103 311
MsG0580030209.01.T01 MTR_5g097220 43.946 446 186 15 1 420 1 408 1.78e-100 305
MsG0580030209.01.T01 MTR_2g021770 43.826 413 201 10 23 420 11 407 5.04e-100 304
MsG0580030209.01.T01 MTR_6g086825 46.117 412 188 11 23 420 69 460 7.11e-99 303
MsG0580030209.01.T01 MTR_7g069550 46.173 405 175 14 24 412 14 391 7.18e-99 301
MsG0580030209.01.T01 MTR_4g055820 47.154 369 162 9 17 373 9 356 8.88e-99 299
MsG0580030209.01.T01 MTR_8g041270 43.839 422 194 13 17 420 10 406 2.53e-98 300
MsG0580030209.01.T01 MTR_0054s0100 44.524 420 194 12 17 420 12 408 2.39e-97 297
MsG0580030209.01.T01 MTR_0134s0060 43.427 426 197 10 17 419 7 411 3.38e-96 295
MsG0580030209.01.T01 MTR_5g037680 43.689 412 182 13 19 414 3 380 9.95e-96 295
MsG0580030209.01.T01 MTR_0054s0090 43.578 436 200 13 1 420 1 406 3.10e-95 292
MsG0580030209.01.T01 MTR_1g007410 42.925 424 198 10 1 412 7 398 8.52e-95 290
MsG0580030209.01.T01 MTR_6g079770 44.213 432 195 13 10 417 5 414 1.48e-94 290
MsG0580030209.01.T01 MTR_5g091140 43.796 411 184 13 1 402 27 399 4.16e-94 289
MsG0580030209.01.T01 MTR_4g028510 44.634 410 191 11 24 420 16 402 8.29e-94 290
MsG0580030209.01.T01 MTR_6g080680 42.290 428 194 12 1 414 1 389 1.01e-93 288
MsG0580030209.01.T01 MTR_6g079810 43.280 439 203 12 1 421 54 464 1.18e-93 290
MsG0580030209.01.T01 MTR_6g461660 44.660 412 191 12 21 421 16 401 1.45e-93 287
MsG0580030209.01.T01 MTR_2g104280 42.254 426 201 15 15 421 7 406 9.59e-93 285
MsG0580030209.01.T01 MTR_4g014370 41.943 422 207 11 14 416 3 405 9.92e-93 285
MsG0580030209.01.T01 MTR_3g011120 42.998 407 190 13 7 409 1 369 1.30e-92 284
MsG0580030209.01.T01 MTR_0831s0010 42.683 410 200 13 17 421 43 422 1.86e-92 285
MsG0580030209.01.T01 MTR_8g012090 46.096 397 143 14 1 389 1 334 4.67e-92 281
MsG0580030209.01.T01 MTR_5g097350 44.246 391 183 13 33 418 25 385 3.41e-91 281
MsG0580030209.01.T01 MTR_8g046310 41.487 417 185 15 15 418 6 376 4.68e-91 280
MsG0580030209.01.T01 MTR_5g069390 42.651 415 207 12 19 420 21 417 1.32e-90 283
MsG0580030209.01.T01 MTR_4g028680 43.160 424 203 13 11 420 1 400 6.55e-90 278
MsG0580030209.01.T01 MTR_5g072060 45.960 396 151 13 23 401 5 354 6.43e-89 282
MsG0580030209.01.T01 MTR_1g053510 39.954 433 206 12 5 415 1 401 6.96e-89 275
MsG0580030209.01.T01 MTR_1g007450 43.797 395 198 10 17 406 7 382 4.35e-88 274
MsG0580030209.01.T01 MTR_2g066170 42.787 409 198 16 17 419 7 385 1.10e-86 269
MsG0580030209.01.T01 MTR_7g017130 42.824 425 212 13 1 421 1 398 1.58e-86 269
MsG0580030209.01.T01 MTR_8g464770 41.975 405 191 13 17 414 7 374 2.18e-86 268
MsG0580030209.01.T01 MTR_2g064950 43.878 392 174 13 17 394 5 364 2.26e-86 269
MsG0580030209.01.T01 MTR_7g017040 43.029 416 199 11 17 421 11 399 2.82e-86 268
MsG0580030209.01.T01 MTR_4g130330 41.429 420 200 11 18 420 1 391 3.07e-86 268
MsG0580030209.01.T01 MTR_5g097680 41.280 453 209 16 1 421 1 428 4.23e-86 269
MsG0580030209.01.T01 MTR_8g013000 45.455 374 167 12 17 378 5 353 8.54e-86 268
MsG0580030209.01.T01 MTR_6g478230 40.807 446 199 15 1 420 1 407 9.17e-86 268
MsG0580030209.01.T01 MTR_5g059430 40.807 446 210 19 1 416 1 422 1.48e-85 268
MsG0580030209.01.T01 MTR_2g066200 41.463 410 204 12 17 419 7 387 3.76e-85 265
MsG0580030209.01.T01 MTR_6g090180 42.260 407 204 10 23 416 46 434 4.72e-85 266
MsG0580030209.01.T01 MTR_4g028660 40.238 420 212 13 11 416 1 395 2.73e-84 263
MsG0580030209.01.T01 MTR_4g027450 40.238 420 212 13 11 416 1 395 2.73e-84 263
MsG0580030209.01.T01 MTR_7g111700 40.941 425 186 10 1 420 1 365 6.20e-84 261
MsG0580030209.01.T01 MTR_7g017170 41.648 437 212 14 1 421 1 410 1.11e-83 262
MsG0580030209.01.T01 MTR_1g007430 44.540 348 159 8 35 378 7 324 2.97e-83 258
MsG0580030209.01.T01 MTR_8g046200 41.060 453 180 19 15 418 6 420 1.24e-82 260
MsG0580030209.01.T01 MTR_8g033140 40.177 453 199 15 5 420 1 418 2.30e-82 259
MsG0580030209.01.T01 MTR_8g064890 41.626 406 197 13 23 420 15 388 2.51e-82 258
MsG0580030209.01.T01 MTR_8g467670 40.247 405 203 13 20 420 10 379 1.65e-81 256
MsG0580030209.01.T01 MTR_6g090250 41.975 405 190 11 42 415 29 419 2.75e-80 254
MsG0580030209.01.T01 MTR_2g066150 38.765 405 190 11 21 420 9 360 5.10e-79 248
MsG0580030209.01.T01 MTR_2g065860 38.725 408 212 11 21 419 9 387 1.61e-78 248
MsG0580030209.01.T01 MTR_2g034700 41.500 400 182 15 23 413 13 369 1.69e-78 248
MsG0580030209.01.T01 MTR_7g079640 42.159 389 175 15 17 398 9 354 8.64e-78 246
MsG0580030209.01.T01 MTR_2g065840 38.741 413 210 12 21 421 9 390 1.58e-77 246
MsG0580030209.01.T01 MTR_5g074800 44.536 366 157 15 63 412 1 336 2.38e-77 244
MsG0580030209.01.T01 MTR_8g064790 38.346 399 170 8 23 420 14 337 6.05e-77 243
MsG0580030209.01.T01 MTR_8g033110 39.770 435 205 13 17 420 7 415 9.14e-77 244
MsG0580030209.01.T01 MTR_5g098950 52.091 263 82 6 124 378 48 274 1.83e-75 236
MsG0580030209.01.T01 MTR_8g032980 38.702 447 201 14 15 420 7 421 2.95e-75 241
MsG0580030209.01.T01 MTR_5g092850 40.143 421 192 16 23 418 15 400 7.12e-75 239
MsG0580030209.01.T01 MTR_5g024260 39.750 400 199 13 14 398 12 384 2.91e-74 238
MsG0580030209.01.T01 MTR_8g046220 37.955 440 194 14 15 418 8 404 4.96e-74 237
MsG0580030209.01.T01 MTR_4g028750 41.237 388 190 14 23 398 15 376 6.38e-74 237
MsG0580030209.01.T01 MTR_5g096910 39.225 413 199 13 23 419 16 392 3.99e-73 234
MsG0580030209.01.T01 MTR_4g007940 39.437 355 177 12 79 417 7 339 1.24e-72 231
MsG0580030209.01.T01 MTR_5g022850 38.072 415 176 9 17 421 11 354 2.16e-72 231
MsG0580030209.01.T01 MTR_8g033090 38.391 435 208 15 17 420 7 412 2.54e-72 233
MsG0580030209.01.T01 MTR_8g063330 39.782 367 188 10 17 375 7 348 2.01e-71 232
MsG0580030209.01.T01 MTR_8g039500 39.257 377 188 11 17 389 7 346 1.17e-69 224
MsG0580030209.01.T01 MTR_6g078010 38.965 367 175 11 61 415 1 330 2.19e-68 221
MsG0580030209.01.T01 MTR_8g018110 38.534 423 197 15 17 414 7 391 1.05e-67 220
MsG0580030209.01.T01 MTR_1g098180 34.588 425 204 14 5 417 1 363 5.19e-67 218
MsG0580030209.01.T01 MTR_6g079790 42.056 321 159 8 114 420 2 309 3.21e-65 211
MsG0580030209.01.T01 MTR_5g064700 39.535 387 186 12 63 420 1 368 5.22e-65 213
MsG0580030209.01.T01 MTR_2g021920 48.954 239 105 5 189 416 37 269 1.47e-63 206
MsG0580030209.01.T01 MTR_5g074850 37.956 411 197 18 24 410 35 411 7.36e-63 218
MsG0580030209.01.T01 MTR_8g036970 38.058 381 156 15 32 406 6 312 1.13e-61 204
MsG0580030209.01.T01 MTR_5g092860 35.979 378 173 12 42 397 20 350 1.87e-61 203
MsG0580030209.01.T01 MTR_7g016930 38.462 364 179 9 17 378 11 331 3.71e-59 196
MsG0580030209.01.T01 MTR_5g075370 36.930 417 204 18 20 410 4 387 8.31e-59 205
MsG0580030209.01.T01 MTR_6g004450 44.366 284 132 9 139 416 2 265 9.01e-59 193
MsG0580030209.01.T01 MTR_5g043605 39.564 321 155 14 108 420 50 339 1.99e-57 193
MsG0580030209.01.T01 MTR_5g068490 39.623 318 150 10 104 420 1 277 2.49e-57 190
MsG0580030209.01.T01 MTR_6g087620 39.812 319 140 10 103 410 2 279 1.80e-55 185
MsG0580030209.01.T01 MTR_5g076490 41.716 338 152 11 100 421 29 337 1.84e-53 181
MsG0580030209.01.T01 MTR_6g090260 51.562 192 85 3 227 415 73 259 3.30e-53 178
MsG0580030209.01.T01 MTR_6g090260 50.000 72 32 2 1 72 1 68 2.02e-11 64.3
MsG0580030209.01.T01 MTR_1g050312 37.342 316 145 12 101 409 15 284 4.04e-51 174
MsG0580030209.01.T01 MTR_8g063370 34.359 390 208 16 32 411 32 383 2.45e-50 175
MsG0580030209.01.T01 MTR_7g023800 37.654 324 141 7 98 411 30 302 6.57e-50 171
MsG0580030209.01.T01 MTR_5g086590 39.695 262 129 9 145 402 2 238 1.70e-48 166
MsG0580030209.01.T01 MTR_5g097850 37.662 308 113 9 123 419 5 244 2.17e-48 166
MsG0580030209.01.T01 MTR_5g096900 40.828 338 148 16 23 343 11 313 3.70e-48 167
MsG0580030209.01.T01 MTR_7g104710 36.994 346 147 12 1 335 1 286 6.33e-47 164
MsG0580030209.01.T01 MTR_8g033000 34.351 393 195 14 61 420 1 363 1.94e-45 161
MsG0580030209.01.T01 MTR_2g104260 40.741 297 131 13 17 296 9 277 2.87e-45 158
MsG0580030209.01.T01 MTR_5g023970 46.465 198 98 5 224 420 6 196 2.88e-45 155
MsG0580030209.01.T01 MTR_8g063310 30.864 405 227 17 23 411 21 388 3.87e-45 161
MsG0580030209.01.T01 MTR_4g016000 43.519 216 89 8 161 370 2 190 6.25e-45 155
MsG0580030209.01.T01 MTR_8g063350 29.657 408 204 10 20 418 10 343 5.03e-44 157
MsG0580030209.01.T01 MTR_4g014370 45.918 196 98 3 221 416 146 333 5.67e-44 156
MsG0580030209.01.T01 MTR_4g014370 38.806 134 78 2 12 145 10 139 3.04e-23 100
MsG0580030209.01.T01 MTR_3g018750 39.592 245 129 6 189 420 3 241 8.64e-44 153
MsG0580030209.01.T01 MTR_6g070880 41.564 243 110 10 21 246 29 256 1.65e-43 153
MsG0580030209.01.T01 MTR_6g071420 41.564 243 110 10 21 246 29 256 1.65e-43 153
MsG0580030209.01.T01 MTR_6g009350 47.059 204 93 7 184 383 3 195 1.32e-42 149
MsG0580030209.01.T01 MTR_5g097820 37.367 281 142 10 16 288 15 269 5.53e-42 149
MsG0580030209.01.T01 MTR_5g094350 36.393 305 136 11 23 307 12 278 6.70e-42 149
MsG0580030209.01.T01 MTR_5g037190 38.489 278 122 9 1 275 1 232 7.05e-42 148
MsG0580030209.01.T01 MTR_8g035690 36.111 288 139 10 162 419 30 302 4.13e-41 148
MsG0580030209.01.T01 MTR_8g073570 45.902 183 73 7 23 200 9 170 7.50e-41 143
MsG0580030209.01.T01 MTR_1g076810 40.807 223 117 5 23 245 17 224 5.70e-40 151
MsG0580030209.01.T01 MTR_7g019250 37.450 251 129 7 156 402 192 418 9.97e-40 148
MsG0580030209.01.T01 MTR_6g079730 55.639 133 59 0 283 415 13 145 4.78e-39 137
MsG0580030209.01.T01 MTR_6g465360 41.667 204 91 7 17 208 57 244 9.07e-37 136
MsG0580030209.01.T01 MTR_5g066420 47.651 149 74 2 265 409 1 149 1.22e-36 131
MsG0580030209.01.T01 MTR_1g115205 37.786 262 118 8 13 272 18 236 1.28e-36 134
MsG0580030209.01.T01 MTR_3g030620 44.242 165 86 4 258 417 16 179 2.45e-33 124
MsG0580030209.01.T01 MTR_5g097660 52.679 112 52 1 308 418 7 118 7.94e-32 117
MsG0580030209.01.T01 MTR_1g050308 33.200 250 131 9 1 246 19 236 9.92e-32 124
MsG0580030209.01.T01 MTR_1g050308 46.847 111 54 2 312 420 240 347 1.05e-19 90.1
MsG0580030209.01.T01 MTR_5g096920 44.805 154 79 3 265 417 1 149 1.23e-31 118
MsG0580030209.01.T01 MTR_2g022020 49.167 120 55 3 299 416 1 116 2.37e-28 108
MsG0580030209.01.T01 MTR_5g036250 62.195 82 30 1 331 412 23 103 2.60e-28 110
MsG0580030209.01.T01 MTR_7g101200 36.170 235 106 10 156 382 38 236 2.40e-27 109
MsG0580030209.01.T01 MTR_3g019290 35.784 204 82 6 17 220 7 161 4.04e-27 107
MsG0580030209.01.T01 MTR_7g017150 40.000 205 109 8 221 421 74 268 7.71e-27 108
MsG0580030209.01.T01 MTR_1g047080 30.978 368 155 16 61 417 1 280 2.44e-26 107
MsG0580030209.01.T01 MTR_5g097540 41.333 150 73 5 230 378 98 233 3.79e-26 107
MsG0580030209.01.T01 MTR_5g097650 36.872 179 89 5 1 179 1 155 7.55e-26 102
MsG0580030209.01.T01 MTR_7g017120 39.024 205 111 8 221 421 73 267 1.08e-25 105
MsG0580030209.01.T01 MTR_5g086780 48.113 106 55 0 291 396 123 228 9.82e-25 102
MsG0580030209.01.T01 MTR_5g086780 56.164 73 20 3 1 73 1 61 5.87e-14 71.2
MsG0580030209.01.T01 MTR_4g133170 26.371 383 212 16 32 399 12 339 9.92e-25 105
MsG0580030209.01.T01 MTR_2g021150 28.358 335 197 11 26 359 16 308 1.33e-23 101
MsG0580030209.01.T01 MTR_3g007410 29.204 339 167 17 32 356 60 339 1.26e-22 99.4
MsG0580030209.01.T01 MTR_3g007360 28.783 337 171 16 32 356 60 339 1.41e-22 99.4
MsG0580030209.01.T01 MTR_2g029990 26.506 332 184 14 32 355 59 338 2.07e-22 99.0
MsG0580030209.01.T01 MTR_5g091150 34.538 249 91 11 114 341 2 199 6.06e-22 93.6
MsG0580030209.01.T01 MTR_0064s0160 25.776 419 266 14 15 418 33 421 1.04e-21 97.1
MsG0580030209.01.T01 MTR_3g013740 25.455 385 213 16 18 383 38 367 1.27e-21 96.7
MsG0580030209.01.T01 MTR_4g023080 25.783 415 226 16 16 416 1 347 6.15e-21 94.0
MsG0580030209.01.T01 MTR_2g031720 27.604 384 216 18 27 395 9 345 7.91e-21 94.0
MsG0580030209.01.T01 MTR_3g006670 26.957 345 182 15 27 358 52 339 1.24e-20 93.6
MsG0580030209.01.T01 MTR_3g034130 26.943 386 215 19 16 380 1 340 3.02e-20 92.0
MsG0580030209.01.T01 MTR_5g096070 35.233 193 72 8 10 197 15 159 5.34e-20 86.7
MsG0580030209.01.T01 MTR_3g014540 25.225 333 192 12 32 358 37 318 6.96e-20 91.3
MsG0580030209.01.T01 MTR_4g021785 26.077 418 222 18 16 416 1 348 1.04e-19 90.1
MsG0580030209.01.T01 MTR_5g096050 47.706 109 45 3 265 362 1 108 1.08e-19 84.7
MsG0580030209.01.T01 MTR_4g117850 25.243 412 238 15 20 417 19 374 1.14e-19 90.5
MsG0580030209.01.T01 MTR_2g021050 26.596 376 202 15 32 392 13 329 1.65e-19 90.1
MsG0580030209.01.T01 MTR_1g009110 26.913 379 215 15 20 383 10 341 2.18e-19 89.7
MsG0580030209.01.T01 MTR_1g094210 25.191 393 212 15 26 399 59 388 2.30e-19 90.1
MsG0580030209.01.T01 MTR_2g028130 24.873 394 238 14 27 395 8 368 2.40e-19 89.7
MsG0580030209.01.T01 MTR_4g023090 26.844 339 185 12 27 356 19 303 2.54e-19 89.4
MsG0580030209.01.T01 MTR_4g116330 26.933 401 229 17 27 416 26 373 4.40e-19 88.6
MsG0580030209.01.T01 MTR_1g094210 25.449 334 185 12 26 355 59 332 4.58e-19 89.0
MsG0580030209.01.T01 MTR_3g083010 23.426 397 235 12 32 395 14 374 5.22e-19 89.0
MsG0580030209.01.T01 MTR_1g068875 25.532 376 213 17 32 393 12 334 7.03e-19 88.2
MsG0580030209.01.T01 MTR_4g094400 48.113 106 42 2 261 353 6 111 7.33e-19 82.8
MsG0580030209.01.T01 MTR_1g050305 54.321 81 32 2 323 398 23 103 9.95e-19 82.8
MsG0580030209.01.T01 MTR_7g070440 25.731 342 203 13 24 356 7 306 1.15e-18 87.4
MsG0580030209.01.T01 MTR_3g009310 28.571 336 185 16 27 358 45 329 1.16e-18 87.8
MsG0580030209.01.T01 MTR_6g027910 24.932 369 221 16 24 383 9 330 1.60e-18 87.0
MsG0580030209.01.T01 MTR_3g014570 26.393 341 184 14 27 356 32 316 1.63e-18 87.0
MsG0580030209.01.T01 MTR_8g101580 27.576 330 180 14 32 355 54 330 2.56e-18 86.7
MsG0580030209.01.T01 MTR_5g057790 26.627 338 191 13 27 359 49 334 2.84e-18 86.7
MsG0580030209.01.T01 MTR_2g026010 27.076 277 161 12 136 395 91 343 3.25e-18 86.3
MsG0580030209.01.T01 MTR_4g094365 26.434 401 240 13 20 414 4 355 3.86e-18 85.9
MsG0580030209.01.T01 MTR_5g057710 25.893 336 196 12 27 359 49 334 4.30e-18 85.9
MsG0580030209.01.T01 MTR_4g117770 26.733 404 233 16 23 416 10 360 4.69e-18 85.5
MsG0580030209.01.T01 MTR_4g117810 26.733 404 233 16 23 416 10 360 4.69e-18 85.5
MsG0580030209.01.T01 MTR_2g028110 27.151 372 219 16 32 395 12 339 5.03e-18 85.5
MsG0580030209.01.T01 MTR_4g109270 25.000 408 241 13 20 416 4 357 6.28e-18 85.1
MsG0580030209.01.T01 MTR_3g013770 26.347 334 191 14 32 358 41 326 6.66e-18 85.5
MsG0580030209.01.T01 MTR_4g109280 27.103 428 215 19 18 420 1 356 1.05e-17 84.3
MsG0580030209.01.T01 MTR_4g117780 26.010 396 238 12 27 416 14 360 1.07e-17 84.3
MsG0580030209.01.T01 MTR_3g011060 27.628 333 204 13 27 358 31 327 1.15e-17 84.7
MsG0580030209.01.T01 MTR_1g050542 26.005 373 208 16 32 393 66 381 1.36e-17 84.7
MsG0580030209.01.T01 MTR_1g068835 23.383 402 234 16 32 419 12 353 2.51e-17 83.6
MsG0580030209.01.T01 MTR_3g034180 24.528 424 243 19 15 416 114 482 2.65e-17 84.3
MsG0580030209.01.T01 MTR_4g107820 26.190 336 186 15 26 355 38 317 2.71e-17 83.6
MsG0580030209.01.T01 MTR_4g107780 24.505 404 233 18 26 414 38 384 2.92e-17 83.6
MsG0580030209.01.T01 MTR_4g107820 26.190 336 186 15 26 355 38 317 3.07e-17 83.2
MsG0580030209.01.T01 MTR_4g107780 26.190 336 186 15 26 355 38 317 3.07e-17 83.2
MsG0580030209.01.T01 MTR_5g011200 27.083 336 188 15 27 355 20 305 3.32e-17 83.2
MsG0580030209.01.T01 MTR_4g116340 31.227 269 124 12 11 273 21 234 3.76e-17 80.9
MsG0580030209.01.T01 MTR_1g097490 24.619 394 235 15 27 414 52 389 3.84e-17 83.2
MsG0580030209.01.T01 MTR_2g031640 26.733 404 220 20 32 419 14 357 3.89e-17 83.2
MsG0580030209.01.T01 MTR_2g461450 25.197 381 203 15 24 382 18 338 4.73e-17 82.4
MsG0580030209.01.T01 MTR_3g011100 25.872 344 190 16 27 358 238 528 5.08e-17 83.6
MsG0580030209.01.T01 MTR_2g426070 26.131 398 228 21 32 403 14 371 9.14e-17 82.0
MsG0580030209.01.T01 MTR_2g425980 28.434 415 225 24 27 415 8 376 1.37e-16 81.6
MsG0580030209.01.T01 MTR_2g028140 24.416 385 240 19 32 395 13 367 1.38e-16 81.6
MsG0580030209.01.T01 MTR_3g007430 26.420 352 199 16 32 376 51 349 1.72e-16 81.3
MsG0580030209.01.T01 MTR_3g010590 23.512 336 179 14 32 358 47 313 2.05e-16 80.9
MsG0580030209.01.T01 MTR_0115s0020 26.087 345 212 14 27 358 13 327 3.04e-16 80.5
MsG0580030209.01.T01 MTR_3g007330 24.771 327 194 11 32 358 56 330 3.05e-16 80.5
MsG0580030209.01.T01 MTR_8g041440 44.330 97 30 2 23 119 14 86 3.08e-16 74.7
MsG0580030209.01.T01 MTR_2g046830 27.019 359 172 17 26 363 27 316 3.11e-16 80.5
MsG0580030209.01.T01 MTR_4g117750 25.510 392 225 18 37 416 16 352 3.27e-16 80.9
MsG0580030209.01.T01 MTR_2g046920 25.959 339 185 13 26 355 26 307 3.39e-16 80.1
MsG0580030209.01.T01 MTR_1g055375 26.331 338 194 17 23 352 3 293 3.51e-16 80.1
MsG0580030209.01.T01 MTR_5g022420 24.556 338 181 12 26 355 29 300 4.22e-16 79.7
MsG0580030209.01.T01 MTR_2g047832 24.409 381 174 16 26 363 31 340 5.34e-16 79.7
MsG0580030209.01.T01 MTR_1g097560 25.191 393 200 16 26 397 38 357 6.10e-16 79.3
MsG0580030209.01.T01 MTR_0044s0300 25.382 327 184 14 32 353 46 317 6.58e-16 79.3
MsG0580030209.01.T01 MTR_2g028160 23.711 388 252 15 27 395 8 370 7.73e-16 79.3
MsG0580030209.01.T01 MTR_5g070130 24.697 413 231 15 27 416 14 369 7.93e-16 79.0
MsG0580030209.01.T01 MTR_1g088120 26.944 360 197 14 22 356 8 326 9.95e-16 79.0
MsG0580030209.01.T01 MTR_4g055060 25.740 338 199 14 27 358 33 324 1.04e-15 78.6
MsG0580030209.01.T01 MTR_4g061340 26.979 341 191 15 27 359 29 319 1.38e-15 78.2
MsG0580030209.01.T01 MTR_4g023070 24.854 342 186 13 27 355 6 289 1.90e-15 77.8
MsG0580030209.01.T01 MTR_2g046900 25.706 354 175 17 26 355 30 319 1.94e-15 77.8
MsG0580030209.01.T01 MTR_5g057690 24.852 338 187 14 27 359 49 324 2.49e-15 77.4
MsG0580030209.01.T01 MTR_8g102520 27.481 262 165 10 159 416 75 315 2.56e-15 77.0
MsG0580030209.01.T01 MTR_1g097330 26.176 340 181 14 26 355 18 297 2.59e-15 77.8
MsG0580030209.01.T01 MTR_3g437520 25.737 373 185 19 26 356 25 347 3.14e-15 77.8
MsG0580030209.01.T01 MTR_3g034160 24.519 416 251 18 16 416 1 368 4.88e-15 76.6
MsG0580030209.01.T01 MTR_4g024890 25.513 341 202 15 26 356 12 310 5.82e-15 76.6
MsG0580030209.01.T01 MTR_4g122850 25.888 394 242 17 35 421 12 362 5.91e-15 76.3
MsG0580030209.01.T01 MTR_3g103020 26.392 413 227 21 22 416 18 371 7.10e-15 76.3
MsG0580030209.01.T01 MTR_3g047580 33.951 162 66 6 7 166 1 123 1.24e-14 70.9
MsG0580030209.01.T01 MTR_3g010970 23.529 340 179 12 27 355 51 320 1.72e-14 75.1
MsG0580030209.01.T01 MTR_3g006570 24.633 341 192 16 27 358 24 308 1.89e-14 74.7
MsG0580030209.01.T01 MTR_5g070080 24.471 425 243 15 19 416 5 378 2.07e-14 74.7
MsG0580030209.01.T01 MTR_5g049560 33.553 152 88 4 61 204 1 147 2.61e-14 73.2
MsG0580030209.01.T01 MTR_2g025960 25.177 282 160 12 136 390 6 263 2.63e-14 73.6
MsG0580030209.01.T01 MTR_1g061330 23.342 407 248 15 27 421 7 361 2.79e-14 74.3
MsG0580030209.01.T01 MTR_2g021252 25.000 336 186 15 27 358 50 323 3.43e-14 73.9
MsG0580030209.01.T01 MTR_2g426090 25.606 371 220 19 32 385 14 345 3.60e-14 74.3
MsG0580030209.01.T01 MTR_4g023120 25.439 342 184 13 27 355 6 289 3.95e-14 73.9
MsG0580030209.01.T01 MTR_7g079370 27.037 270 167 11 159 416 98 349 5.25e-14 73.2
MsG0580030209.01.T01 MTR_2g031680 25.459 381 211 20 32 395 14 338 5.32e-14 73.6
MsG0580030209.01.T01 MTR_5g048160 25.653 421 247 20 27 418 7 390 5.96e-14 73.6
MsG0580030209.01.T01 MTR_6g048120 28.152 341 190 19 27 358 39 333 7.84e-14 73.2
MsG0580030209.01.T01 MTR_3g009240 26.048 334 192 15 27 358 39 319 7.98e-14 73.2
MsG0580030209.01.T01 MTR_4g019990 25.419 358 192 18 26 356 8 317 1.13e-13 72.4
MsG0580030209.01.T01 MTR_4g118380 27.297 381 205 18 37 389 21 357 1.24e-13 72.0
MsG0580030209.01.T01 MTR_2g021155 27.700 213 125 8 156 364 708 895 1.32e-13 73.6
MsG0580030209.01.T01 MTR_4g070550 24.156 385 230 17 32 392 13 359 1.33e-13 72.4
MsG0580030209.01.T01 MTR_4g023130 27.660 282 149 13 149 416 66 306 1.47e-13 71.6
MsG0580030209.01.T01 MTR_8g062660 23.573 403 212 18 27 409 25 351 1.85e-13 72.8
MsG0580030209.01.T01 MTR_6g060650 26.768 396 224 18 37 416 21 366 2.35e-13 71.6
MsG0580030209.01.T01 MTR_3g030330 23.724 333 197 10 27 358 23 299 3.92e-13 70.9
MsG0580030209.01.T01 MTR_8g099460 24.474 380 227 13 32 395 13 348 8.25e-13 70.1
MsG0580030209.01.T01 MTR_7g055977 25.352 355 184 15 26 356 9 306 1.39e-12 69.3
MsG0580030209.01.T01 MTR_1g055070 25.000 288 168 11 27 301 52 304 1.41e-12 69.3
MsG0580030209.01.T01 MTR_2g021860 33.051 118 69 4 112 225 13 124 1.88e-12 65.1
MsG0580030209.01.T01 MTR_7g066000 26.496 351 194 15 26 356 27 333 2.27e-12 68.6
MsG0580030209.01.T01 MTR_5g070088 24.750 400 260 15 27 416 10 378 2.31e-12 68.6
MsG0580030209.01.T01 MTR_3g036290 23.077 351 202 11 27 373 25 311 3.14e-12 67.8
MsG0580030209.01.T01 MTR_6g087660 42.529 87 42 3 1 85 1 81 3.58e-12 65.5
MsG0580030209.01.T01 MTR_0760s0010 24.695 328 183 13 32 355 55 322 4.10e-12 67.8
MsG0580030209.01.T01 MTR_3g097190 43.038 79 39 1 315 393 9 81 5.52e-12 64.7
MsG0580030209.01.T01 MTR_7g055870 25.269 372 213 14 24 362 13 352 7.06e-12 67.4
MsG0580030209.01.T01 MTR_5g007610 24.561 342 198 16 27 356 44 337 1.09e-11 66.6
MsG0580030209.01.T01 MTR_7g007300 26.426 333 175 16 27 352 106 375 1.30e-11 66.6
MsG0580030209.01.T01 MTR_3g058470 27.027 222 135 8 27 246 40 236 1.72e-11 65.9
MsG0580030209.01.T01 MTR_2g021210 25.073 343 196 16 19 358 79 363 2.39e-11 65.5
MsG0580030209.01.T01 MTR_3g058480 26.423 246 149 9 27 271 42 256 3.34e-11 64.7
MsG0580030209.01.T01 MTR_6g048140 26.627 338 173 18 32 353 47 325 7.59e-11 63.9
MsG0580030209.01.T01 MTR_8g066440 25.298 419 246 23 26 417 25 403 7.68e-11 63.9
MsG0580030209.01.T01 MTR_2g078870 24.378 201 114 8 158 358 77 239 7.78e-11 63.2
MsG0580030209.01.T01 MTR_7g091630 27.557 352 193 17 26 356 34 344 8.54e-11 63.9
MsG0580030209.01.T01 MTR_8g073550 28.139 231 126 10 27 255 33 225 9.99e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030209.01.T01 AT4G12560 27.059 255 161 9 158 398 109 352 2.02e-15 78.2
MsG0580030209.01.T01 AT4G12560 27.059 255 161 9 158 398 109 352 2.02e-15 78.2
MsG0580030209.01.T01 AT4G12560 27.059 255 161 9 158 398 109 352 2.02e-15 78.2
MsG0580030209.01.T01 AT4G21240 24.574 411 220 18 27 408 39 388 3.10e-13 71.6
MsG0580030209.01.T01 AT3G17620 24.561 342 199 15 33 361 14 309 7.48e-12 67.0

Find 105 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGTACACTTAGTATTAA+TGG 0.206877 5:-108253981 MsG0580030209.01.T01:CDS
CACCAATCTCATCAATTATC+TGG 0.219015 5:+108253208 None:intergenic
ATTGATGAGATTGGTGTTAA+AGG 0.236075 5:-108253201 MsG0580030209.01.T01:CDS
TTCTTTCATTTCCATGGATT+TGG 0.243469 5:-108253822 MsG0580030209.01.T01:CDS
GAAAAGATGGTGAACTAGTT+TGG 0.244361 5:-108253245 MsG0580030209.01.T01:CDS
ATAGCTTTCGAGCTGTATTA+TGG 0.278569 5:-108253917 MsG0580030209.01.T01:CDS
CACCACCAATTGTCTTTGTA+TGG 0.316438 5:+108253443 None:intergenic
GATCAGCCGGTGACCGGTTC+CGG 0.328856 5:-108253612 MsG0580030209.01.T01:CDS
CTCAAATCTTTGAAGCGGTT+TGG 0.332863 5:-108254263 MsG0580030209.01.T01:CDS
GATTGAAGAGTTAAAGTTAA+AGG 0.339021 5:-108254345 MsG0580030209.01.T01:CDS
CCGATGAGAGGTTTGAAAAT+AGG 0.341961 5:-108254058 MsG0580030209.01.T01:CDS
TGGATCAAACTCTTTATCAT+TGG 0.370810 5:-108253330 MsG0580030209.01.T01:CDS
ATATAATTCAACAGGTTGTT+TGG 0.374603 5:-108253544 MsG0580030209.01.T01:CDS
TATTCTGTATCGGGCAAGAT+AGG 0.400193 5:-108253956 MsG0580030209.01.T01:CDS
TGTATCACCACCGCCGTGAT+AGG 0.401546 5:+108254154 None:intergenic
TCACCTGTCTCAGTCAGTTC+AGG 0.409528 5:+108254113 None:intergenic
AATGATTTATATAATTCAAC+AGG 0.416573 5:-108253552 MsG0580030209.01.T01:CDS
AATCCATGGAAATGAAAGAA+TGG 0.418315 5:+108253825 None:intergenic
TTAATGGTTTATTCTGTATC+GGG 0.426211 5:-108253965 MsG0580030209.01.T01:CDS
GACCCATTCTTTCATTTCCA+TGG 0.427208 5:-108253828 MsG0580030209.01.T01:CDS
ATTAATGGTTTATTCTGTAT+CGG 0.429365 5:-108253966 MsG0580030209.01.T01:CDS
AACTCCAATGGGACACTCAA+TGG 0.438329 5:+108253296 None:intergenic
GTGGGAGATGGAGAAATCTA+TGG 0.439198 5:-108254381 None:intergenic
TGTAGCCATACAAAGACAAT+TGG 0.443623 5:-108253448 MsG0580030209.01.T01:CDS
CCCATTGGAGTTGGGAAGAA+AGG 0.445937 5:-108253285 MsG0580030209.01.T01:CDS
CCTTTCTTCCCAACTCCAAT+GGG 0.445998 5:+108253285 None:intergenic
TTGAGTGTCCCATTGGAGTT+GGG 0.448362 5:-108253293 MsG0580030209.01.T01:CDS
GAGATGTCATCCTCATGAAA+TGG 0.449410 5:+108254014 None:intergenic
GAGAAATCTATGGCAGTGGC+TGG 0.453229 5:-108254371 MsG0580030209.01.T01:CDS
AGGAATGGCCACGGATTCTC+TGG 0.455229 5:+108253884 None:intergenic
GCCTTTCTTCCCAACTCCAA+TGG 0.458054 5:+108253284 None:intergenic
TCGAGCTGTATTATGGAATC+CGG 0.475714 5:-108253910 MsG0580030209.01.T01:CDS
TCCGCACTCATTTCTCATCT+AGG 0.481415 5:-108254184 MsG0580030209.01.T01:CDS
GTTTGCTTCAAAAGAAAAGA+TGG 0.483468 5:-108253258 MsG0580030209.01.T01:CDS
CCTCCCATTGAGTGTCCCAT+TGG 0.484234 5:-108253300 MsG0580030209.01.T01:CDS
ATCCATGGAAATGAAAGAAT+GGG 0.484583 5:+108253826 None:intergenic
TAAGGTGGTACAGACTCGTC+AGG 0.484676 5:+108253855 None:intergenic
TACACTCCGGAACCGGTCAC+CGG 0.486084 5:+108253606 None:intergenic
AAAGAAAACCTTCTTCCGAT+TGG 0.486502 5:-108253147 MsG0580030209.01.T01:CDS
GGCTGATCATAATCACAATT+CGG 0.490265 5:+108253627 None:intergenic
ATTGAGTGTCCCATTGGAGT+TGG 0.491134 5:-108253294 MsG0580030209.01.T01:CDS
CGGAGCATGTTCATGAAATG+AGG 0.491682 5:+108254203 None:intergenic
ATGAAGATGAAGACGTGCCA+TGG 0.498883 5:-108253737 MsG0580030209.01.T01:CDS
ACTCCAATGGGACACTCAAT+GGG 0.500369 5:+108253297 None:intergenic
GGTACAGACTCGTCAGGGCT+AGG 0.501380 5:+108253861 None:intergenic
TACTTGTTAATTCTTCCAAT+CGG 0.502722 5:+108253132 None:intergenic
TGAAAGAATGGGTCACGATA+AGG 0.503655 5:+108253837 None:intergenic
TCCCAGATAATTGATGAGAT+TGG 0.504419 5:-108253210 MsG0580030209.01.T01:CDS
TTGGTTGCGTATGCAAATCA+TGG 0.507429 5:-108254244 MsG0580030209.01.T01:CDS
GTTCATGTACACTCCGGAAC+CGG 0.507728 5:+108253599 None:intergenic
GAGCCTGAACTGACTGAGAC+AGG 0.510831 5:-108254116 MsG0580030209.01.T01:CDS
CTCGTCAGGGCTAGGAGGAA+TGG 0.517530 5:+108253869 None:intergenic
ACATGAACGGAGCGTGTCAT+TGG 0.518328 5:-108253584 MsG0580030209.01.T01:CDS
TAATTCTTCCAATCGGAAGA+AGG 0.521215 5:+108253139 None:intergenic
GATTATGATCAGCCGGTGAC+CGG 0.526481 5:-108253618 MsG0580030209.01.T01:CDS
ACAGGTGAATACTATTATCA+TGG 0.532037 5:-108254098 MsG0580030209.01.T01:CDS
ACCAATCTCATCAATTATCT+GGG 0.533320 5:+108253209 None:intergenic
TACCTCTCAAATCTTTGAAG+CGG 0.533393 5:-108254268 MsG0580030209.01.T01:CDS
CATGGTCATAACCAAATCCA+TGG 0.535713 5:+108253811 None:intergenic
TGAACGGAGCGTGTCATTGG+TGG 0.537883 5:-108253581 MsG0580030209.01.T01:CDS
GCCACGGATTCTCTGGTAGC+CGG 0.538926 5:+108253891 None:intergenic
GTGAATACTATTATCATGGC+AGG 0.541013 5:-108254094 MsG0580030209.01.T01:CDS
GAACGGAGCGTGTCATTGGT+GGG 0.547748 5:-108253580 MsG0580030209.01.T01:CDS
TTTGGGTGAACTCGGTGTGA+AGG 0.552085 5:-108253358 MsG0580030209.01.T01:CDS
AGACTATATATCTCCAACAC+GGG 0.561754 5:+108253696 None:intergenic
ATAGTCTTAGAAGTAACTCA+TGG 0.565035 5:-108253680 MsG0580030209.01.T01:CDS
GCAAGATAGGCGTAGAGGAA+TGG 0.565160 5:-108253943 MsG0580030209.01.T01:CDS
TGAAGATGAAGACGTGCCAT+GGG 0.570431 5:-108253736 MsG0580030209.01.T01:CDS
GGACACTCAATGGGAGGCAT+CGG 0.573993 5:+108253306 None:intergenic
TCTATTTGCTCCCCGATGAG+AGG 0.574784 5:-108254070 MsG0580030209.01.T01:CDS
AGCCATACAAAGACAATTGG+TGG 0.574991 5:-108253445 MsG0580030209.01.T01:CDS
TGGCACGTCTTCATCTTCAT+CGG 0.576901 5:+108253740 None:intergenic
TGTTAGAGATGACTATAAAG+TGG 0.582389 5:-108253790 MsG0580030209.01.T01:CDS
CTTTATAGTCATCTCTAACA+TGG 0.585204 5:+108253793 None:intergenic
AACAGTTCCTATCACGGCGG+TGG 0.587698 5:-108254161 MsG0580030209.01.T01:CDS
GATGGAGAAATCTATGGCAG+TGG 0.589806 5:-108254375 MsG0580030209.01.T01:CDS
TCATCCTCATGAAATGGAGG+TGG 0.597818 5:+108254020 None:intergenic
AGAAATCTATGGCAGTGGCT+GGG 0.605449 5:-108254370 MsG0580030209.01.T01:CDS
AACTCGGTGTGAAGGAATCG+TGG 0.606050 5:-108253350 MsG0580030209.01.T01:CDS
ACAACTTACATCATTGTCTG+AGG 0.607700 5:+108253476 None:intergenic
TCTAGGAACAGTTCCTATCA+CGG 0.609896 5:-108254167 MsG0580030209.01.T01:CDS
AACGGAGCGTGTCATTGGTG+GGG 0.610039 5:-108253579 MsG0580030209.01.T01:CDS
TTTGCCACCTCCATTTCATG+AGG 0.614471 5:-108254024 MsG0580030209.01.T01:CDS
TCCGGCTACCAGAGAATCCG+TGG 0.623695 5:-108253892 MsG0580030209.01.T01:CDS
GAATTGTGATTATGATCAGC+CGG 0.630958 5:-108253625 MsG0580030209.01.T01:CDS
GGAGCATGTTCATGAAATGA+GGG 0.635076 5:+108254204 None:intergenic
CAACTTACATCATTGTCTGA+GGG 0.636846 5:+108253477 None:intergenic
TCATACGATCTATCTTCCCA+TGG 0.642796 5:+108253720 None:intergenic
ATGTCATCCTCATGAAATGG+AGG 0.643543 5:+108254017 None:intergenic
AACCGCTTCAAAGATTTGAG+AGG 0.653692 5:+108254266 None:intergenic
ACAGACTCGTCAGGGCTAGG+AGG 0.653970 5:+108253864 None:intergenic
TAGATCGTATGACCCCGTGT+TGG 0.654881 5:-108253709 MsG0580030209.01.T01:CDS
AAGACTATATATCTCCAACA+CGG 0.657084 5:+108253695 None:intergenic
AAGAATGGGTCACGATAAGG+TGG 0.658331 5:+108253840 None:intergenic
CGCTCCGTTCATGTACACTC+CGG 0.662548 5:+108253593 None:intergenic
AGGGCTAGGAGGAATGGCCA+CGG 0.662800 5:+108253875 None:intergenic
AAGGTGGTACAGACTCGTCA+GGG 0.670264 5:+108253856 None:intergenic
ATCGGGCAAGATAGGCGTAG+AGG 0.687582 5:-108253948 MsG0580030209.01.T01:CDS
CCAATGGGACACTCAATGGG+AGG 0.689455 5:+108253300 None:intergenic
GGTTCCGGAGTGTACATGAA+CGG 0.697585 5:-108253597 MsG0580030209.01.T01:CDS
GTCATTTAACGTGAGCAACG+AGG 0.718105 5:-108253520 MsG0580030209.01.T01:CDS
GTCTTAGAAGTAACTCATGG+AGG 0.718927 5:-108253677 MsG0580030209.01.T01:CDS
TCCTAGATGAGAAATGAGTG+CGG 0.729597 5:+108254183 None:intergenic
GACTATATATCTCCAACACG+GGG 0.729854 5:+108253697 None:intergenic
AGGAACAGTTCCTATCACGG+CGG 0.797648 5:-108254164 MsG0580030209.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGATTTATATAATTCAAC+AGG - Chr5:108253953-108253972 MsG0580030209.01.T01:CDS 15.0%
!!! TAGTTTTGATAAAATGAAAA+GGG + Chr5:108253219-108253238 None:intergenic 15.0%
!! ATTAATGGTTTATTCTGTAT+CGG - Chr5:108253539-108253558 MsG0580030209.01.T01:CDS 20.0%
!!! ACTTTTCACATTTCAATTTT+GGG - Chr5:108254130-108254149 MsG0580030209.01.T01:CDS 20.0%
!!! GTAGTTTTGATAAAATGAAA+AGG + Chr5:108253220-108253239 None:intergenic 20.0%
!!! TACTTTTCACATTTCAATTT+TGG - Chr5:108254129-108254148 MsG0580030209.01.T01:CDS 20.0%
! ATATAATTCAACAGGTTGTT+TGG - Chr5:108253961-108253980 MsG0580030209.01.T01:CDS 25.0%
! GATTGAAGAGTTAAAGTTAA+AGG - Chr5:108253160-108253179 MsG0580030209.01.T01:CDS 25.0%
! TTAATGGTTTATTCTGTATC+GGG - Chr5:108253540-108253559 MsG0580030209.01.T01:CDS 25.0%
! TTAGGTACACTTAGTATTAA+TGG - Chr5:108253524-108253543 MsG0580030209.01.T01:CDS 25.0%
!! TACTTGTTAATTCTTCCAAT+CGG + Chr5:108254376-108254395 None:intergenic 25.0%
AAGACTATATATCTCCAACA+CGG + Chr5:108253813-108253832 None:intergenic 30.0%
AATCCATGGAAATGAAAGAA+TGG + Chr5:108253683-108253702 None:intergenic 30.0%
ACAGGTGAATACTATTATCA+TGG - Chr5:108253407-108253426 MsG0580030209.01.T01:CDS 30.0%
ACCAATCTCATCAATTATCT+GGG + Chr5:108254299-108254318 None:intergenic 30.0%
ATCCATGGAAATGAAAGAAT+GGG + Chr5:108253682-108253701 None:intergenic 30.0%
CTTTATAGTCATCTCTAACA+TGG + Chr5:108253715-108253734 None:intergenic 30.0%
GTTTGCTTCAAAAGAAAAGA+TGG - Chr5:108254247-108254266 MsG0580030209.01.T01:CDS 30.0%
TGGATCAAACTCTTTATCAT+TGG - Chr5:108254175-108254194 MsG0580030209.01.T01:CDS 30.0%
TGTTAGAGATGACTATAAAG+TGG - Chr5:108253715-108253734 MsG0580030209.01.T01:CDS 30.0%
TTCTTTCATTTCCATGGATT+TGG - Chr5:108253683-108253702 MsG0580030209.01.T01:CDS 30.0%
! ATAGTCTTAGAAGTAACTCA+TGG - Chr5:108253825-108253844 MsG0580030209.01.T01:CDS 30.0%
! GACATCTCTGTTTATCTTTT+AGG - Chr5:108253506-108253525 MsG0580030209.01.T01:CDS 30.0%
!! ATTGATGAGATTGGTGTTAA+AGG - Chr5:108254304-108254323 MsG0580030209.01.T01:CDS 30.0%
!! ATTTCAATTTTGGGTGAACT+CGG - Chr5:108254139-108254158 MsG0580030209.01.T01:CDS 30.0%
AAAGAAAACCTTCTTCCGAT+TGG - Chr5:108254358-108254377 MsG0580030209.01.T01:CDS 35.0%
ACAACTTACATCATTGTCTG+AGG + Chr5:108254032-108254051 None:intergenic 35.0%
AGACTATATATCTCCAACAC+GGG + Chr5:108253812-108253831 None:intergenic 35.0%
ATAGCTTTCGAGCTGTATTA+TGG - Chr5:108253588-108253607 MsG0580030209.01.T01:CDS 35.0%
CAACTTACATCATTGTCTGA+GGG + Chr5:108254031-108254050 None:intergenic 35.0%
CACCAATCTCATCAATTATC+TGG + Chr5:108254300-108254319 None:intergenic 35.0%
GAAAAGATGGTGAACTAGTT+TGG - Chr5:108254260-108254279 MsG0580030209.01.T01:CDS 35.0%
GAATTGTGATTATGATCAGC+CGG - Chr5:108253880-108253899 MsG0580030209.01.T01:CDS 35.0%
GGCTGATCATAATCACAATT+CGG + Chr5:108253881-108253900 None:intergenic 35.0%
GTGAATACTATTATCATGGC+AGG - Chr5:108253411-108253430 MsG0580030209.01.T01:CDS 35.0%
TAATTCTTCCAATCGGAAGA+AGG + Chr5:108254369-108254388 None:intergenic 35.0%
TCCCAGATAATTGATGAGAT+TGG - Chr5:108254295-108254314 MsG0580030209.01.T01:CDS 35.0%
TGTAGCCATACAAAGACAAT+TGG - Chr5:108254057-108254076 MsG0580030209.01.T01:CDS 35.0%
! CCTATTTTCAAACCTCTCAT+CGG + Chr5:108253450-108253469 None:intergenic 35.0%
! CTATTTTCAAACCTCTCATC+GGG + Chr5:108253449-108253468 None:intergenic 35.0%
! TACCTCTCAAATCTTTGAAG+CGG - Chr5:108253237-108253256 MsG0580030209.01.T01:CDS 35.0%
! TATTTTCAAACCTCTCATCG+GGG + Chr5:108253448-108253467 None:intergenic 35.0%
!! AGAGAGATTTTGTTGTCAGA+TGG - Chr5:108254327-108254346 MsG0580030209.01.T01:CDS 35.0%
!! GAGAGATTTTGTTGTCAGAT+GGG - Chr5:108254328-108254347 MsG0580030209.01.T01:CDS 35.0%
AACCGCTTCAAAGATTTGAG+AGG + Chr5:108253242-108253261 None:intergenic 40.0%
AGCCATACAAAGACAATTGG+TGG - Chr5:108254060-108254079 MsG0580030209.01.T01:CDS 40.0%
ATGTCATCCTCATGAAATGG+AGG + Chr5:108253491-108253510 None:intergenic 40.0%
CACCACCAATTGTCTTTGTA+TGG + Chr5:108254065-108254084 None:intergenic 40.0%
CATGGTCATAACCAAATCCA+TGG + Chr5:108253697-108253716 None:intergenic 40.0%
CCGATGAGAGGTTTGAAAAT+AGG - Chr5:108253447-108253466 MsG0580030209.01.T01:CDS 40.0%
GACCCATTCTTTCATTTCCA+TGG - Chr5:108253677-108253696 MsG0580030209.01.T01:CDS 40.0%
GACTATATATCTCCAACACG+GGG + Chr5:108253811-108253830 None:intergenic 40.0%
GAGATGTCATCCTCATGAAA+TGG + Chr5:108253494-108253513 None:intergenic 40.0%
GGAGCATGTTCATGAAATGA+GGG + Chr5:108253304-108253323 None:intergenic 40.0%
GTCTTAGAAGTAACTCATGG+AGG - Chr5:108253828-108253847 MsG0580030209.01.T01:CDS 40.0%
TATTCTGTATCGGGCAAGAT+AGG - Chr5:108253549-108253568 MsG0580030209.01.T01:CDS 40.0%
TCATACGATCTATCTTCCCA+TGG + Chr5:108253788-108253807 None:intergenic 40.0%
TCCTAGATGAGAAATGAGTG+CGG + Chr5:108253325-108253344 None:intergenic 40.0%
TCGAGCTGTATTATGGAATC+CGG - Chr5:108253595-108253614 MsG0580030209.01.T01:CDS 40.0%
TCTAGGAACAGTTCCTATCA+CGG - Chr5:108253338-108253357 MsG0580030209.01.T01:CDS 40.0%
TGAAAGAATGGGTCACGATA+AGG + Chr5:108253671-108253690 None:intergenic 40.0%
TTGGTTGCGTATGCAAATCA+TGG - Chr5:108253261-108253280 MsG0580030209.01.T01:CDS 40.0%
!! CTCAAATCTTTGAAGCGGTT+TGG - Chr5:108253242-108253261 MsG0580030209.01.T01:CDS 40.0%
AACTCCAATGGGACACTCAA+TGG + Chr5:108254212-108254231 None:intergenic 45.0%
AAGAATGGGTCACGATAAGG+TGG + Chr5:108253668-108253687 None:intergenic 45.0%
ACTCCAATGGGACACTCAAT+GGG + Chr5:108254211-108254230 None:intergenic 45.0%
AGAAATCTATGGCAGTGGCT+GGG - Chr5:108253135-108253154 MsG0580030209.01.T01:CDS 45.0%
ATGAAGATGAAGACGTGCCA+TGG - Chr5:108253768-108253787 MsG0580030209.01.T01:CDS 45.0%
ATTGAGTGTCCCATTGGAGT+TGG - Chr5:108254211-108254230 MsG0580030209.01.T01:CDS 45.0%
CCTTTCTTCCCAACTCCAAT+GGG + Chr5:108254223-108254242 None:intergenic 45.0%
CGGAGCATGTTCATGAAATG+AGG + Chr5:108253305-108253324 None:intergenic 45.0%
GTCATTTAACGTGAGCAACG+AGG - Chr5:108253985-108254004 MsG0580030209.01.T01:CDS 45.0%
TCATCCTCATGAAATGGAGG+TGG + Chr5:108253488-108253507 None:intergenic 45.0%
TCCGCACTCATTTCTCATCT+AGG - Chr5:108253321-108253340 MsG0580030209.01.T01:CDS 45.0%
TGAAGATGAAGACGTGCCAT+GGG - Chr5:108253769-108253788 MsG0580030209.01.T01:CDS 45.0%
TGGCACGTCTTCATCTTCAT+CGG + Chr5:108253768-108253787 None:intergenic 45.0%
TTGAGTGTCCCATTGGAGTT+GGG - Chr5:108254212-108254231 MsG0580030209.01.T01:CDS 45.0%
TTTGCCACCTCCATTTCATG+AGG - Chr5:108253481-108253500 MsG0580030209.01.T01:CDS 45.0%
AAGGTGGTACAGACTCGTCA+GGG + Chr5:108253652-108253671 None:intergenic 50.0%
ACATGAACGGAGCGTGTCAT+TGG - Chr5:108253921-108253940 MsG0580030209.01.T01:CDS 50.0%
AGGAACAGTTCCTATCACGG+CGG - Chr5:108253341-108253360 MsG0580030209.01.T01:CDS 50.0%
CCCATTGGAGTTGGGAAGAA+AGG - Chr5:108254220-108254239 MsG0580030209.01.T01:CDS 50.0%
GAGAAATCTATGGCAGTGGC+TGG - Chr5:108253134-108253153 MsG0580030209.01.T01:CDS 50.0%
GATTATGATCAGCCGGTGAC+CGG - Chr5:108253887-108253906 MsG0580030209.01.T01:CDS 50.0%
GCAAGATAGGCGTAGAGGAA+TGG - Chr5:108253562-108253581 MsG0580030209.01.T01:CDS 50.0%
GCCTTTCTTCCCAACTCCAA+TGG + Chr5:108254224-108254243 None:intergenic 50.0%
GGTTCCGGAGTGTACATGAA+CGG - Chr5:108253908-108253927 MsG0580030209.01.T01:CDS 50.0%
GTTCATGTACACTCCGGAAC+CGG + Chr5:108253909-108253928 None:intergenic 50.0%
TAAGGTGGTACAGACTCGTC+AGG + Chr5:108253653-108253672 None:intergenic 50.0%
TAGATCGTATGACCCCGTGT+TGG - Chr5:108253796-108253815 MsG0580030209.01.T01:CDS 50.0%
TCACCTGTCTCAGTCAGTTC+AGG + Chr5:108253395-108253414 None:intergenic 50.0%
TCTATTTGCTCCCCGATGAG+AGG - Chr5:108253435-108253454 MsG0580030209.01.T01:CDS 50.0%
!! AACTCGGTGTGAAGGAATCG+TGG - Chr5:108254155-108254174 MsG0580030209.01.T01:CDS 50.0%
!! TTTGGGTGAACTCGGTGTGA+AGG - Chr5:108254147-108254166 MsG0580030209.01.T01:CDS 50.0%
AACAGTTCCTATCACGGCGG+TGG - Chr5:108253344-108253363 MsG0580030209.01.T01:CDS 55.0%
AGGAATGGCCACGGATTCTC+TGG + Chr5:108253624-108253643 None:intergenic 55.0%
ATCGGGCAAGATAGGCGTAG+AGG - Chr5:108253557-108253576 MsG0580030209.01.T01:CDS 55.0%
CCAATGGGACACTCAATGGG+AGG + Chr5:108254208-108254227 None:intergenic 55.0%
CCTCCCATTGAGTGTCCCAT+TGG - Chr5:108254205-108254224 MsG0580030209.01.T01:CDS 55.0%
CGCTCCGTTCATGTACACTC+CGG + Chr5:108253915-108253934 None:intergenic 55.0%
GAGCCTGAACTGACTGAGAC+AGG - Chr5:108253389-108253408 MsG0580030209.01.T01:CDS 55.0%
TGTATCACCACCGCCGTGAT+AGG + Chr5:108253354-108253373 None:intergenic 55.0%
! AACGGAGCGTGTCATTGGTG+GGG - Chr5:108253926-108253945 MsG0580030209.01.T01:CDS 55.0%
! GAACGGAGCGTGTCATTGGT+GGG - Chr5:108253925-108253944 MsG0580030209.01.T01:CDS 55.0%
! GGACACTCAATGGGAGGCAT+CGG + Chr5:108254202-108254221 None:intergenic 55.0%
! TGAACGGAGCGTGTCATTGG+TGG - Chr5:108253924-108253943 MsG0580030209.01.T01:CDS 55.0%
ACAGACTCGTCAGGGCTAGG+AGG + Chr5:108253644-108253663 None:intergenic 60.0%
AGGGCTAGGAGGAATGGCCA+CGG + Chr5:108253633-108253652 None:intergenic 60.0%
CTCGTCAGGGCTAGGAGGAA+TGG + Chr5:108253639-108253658 None:intergenic 60.0%
GCCACGGATTCTCTGGTAGC+CGG + Chr5:108253617-108253636 None:intergenic 60.0%
GGTACAGACTCGTCAGGGCT+AGG + Chr5:108253647-108253666 None:intergenic 60.0%
TACACTCCGGAACCGGTCAC+CGG + Chr5:108253902-108253921 None:intergenic 60.0%
TCCGGCTACCAGAGAATCCG+TGG - Chr5:108253613-108253632 MsG0580030209.01.T01:CDS 60.0%
! GATCAGCCGGTGACCGGTTC+CGG - Chr5:108253893-108253912 MsG0580030209.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 108253131 108254396 108253131 ID=MsG0580030209.01;Name=MsG0580030209.01
Chr5 mRNA 108253131 108254396 108253131 ID=MsG0580030209.01.T01;Parent=MsG0580030209.01;Name=MsG0580030209.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|421
Chr5 exon 108253131 108254396 108253131 ID=MsG0580030209.01.T01:exon:17678;Parent=MsG0580030209.01.T01
Chr5 CDS 108253131 108254396 108253131 ID=MsG0580030209.01.T01:cds;Parent=MsG0580030209.01.T01
Gene Sequence

>MsG0580030209.01.T01

ATGGAGAAATCTATGGCAGTGGCTGGGACGATTGAAGAGTTAAAGTTAAAGGTAAGAAACAATCTTCATGTTCATGACGATCTTGCCCTTTTCATTTTATCAAAACTACCTCTCAAATCTTTGAAGCGGTTTGGTTGCGTATGCAAATCATGGTCTCTCTTGTTTCAAAACCCTCATTTCATGAACATGCTCCGCACTCATTTCTCATCTAGGAACAGTTCCTATCACGGCGGTGGTGATACATTTCTTTTCATACACGAGCCTGAACTGACTGAGACAGGTGAATACTATTATCATGGCAGGTTCTATTTGCTCCCCGATGAGAGGTTTGAAAATAGGATCAAATTTGATTTGCCACCTCCATTTCATGAGGATGACATCTCTGTTTATCTTTTAGGTACACTTAGTATTAATGGTTTATTCTGTATCGGGCAAGATAGGCGTAGAGGAATGGTAAATAGCTTTCGAGCTGTATTATGGAATCCGGCTACCAGAGAATCCGTGGCCATTCCTCCTAGCCCTGACGAGTCTGTACCACCTTATCGTGACCCATTCTTTCATTTCCATGGATTTGGTTATGACCATGTTAGAGATGACTATAAAGTGGTTCGATATATGTCATTTTTCAATGTAACCGATGAAGATGAAGACGTGCCATGGGAAGATAGATCGTATGACCCCGTGTTGGAGATATATAGTCTTAGAAGTAACTCATGGAGGATACTCGAGATCGAGATGTGTGATATGCCGAATTGTGATTATGATCAGCCGGTGACCGGTTCCGGAGTGTACATGAACGGAGCGTGTCATTGGTGGGGTAACAATGATTTATATAATTCAACAGGTTGTTTGGTGTCATTTAACGTGAGCAACGAGGTGTTGTCTACAACATCTATGCCCTCAGACAATGATGTAAGTTGTGATTTTGTAGCCATACAAAGACAATTGGTGGTGTTAAATGAGTCAATTGCATTGATCTCAAATTGTTACAATACTACTACTTTTCACATTTCAATTTTGGGTGAACTCGGTGTGAAGGAATCGTGGATCAAACTCTTTATCATTGGACCGATGCCTCCCATTGAGTGTCCCATTGGAGTTGGGAAGAAAGGCAGTGTTTGCTTCAAAAGAAAAGATGGTGAACTAGTTTGGATTGATTTAAGCTCCCAGATAATTGATGAGATTGGTGTTAAAGGAGAGAGATTTTGTTGTCAGATGGGAATTTACAAAGAAAACCTTCTTCCGATTGGAAGAATTAACAAGTAG
Protein sequence

>MsG0580030209.01.T01

MEKSMAVAGTIEELKLKVRNNLHVHDDLALFILSKLPLKSLKRFGCVCKSWSLLFQNPHFMNMLRTHFSSRNSSYHGGGDTFLFIHEPELTETGEYYYHGRFYLLPDERFENRIKFDLPPPFHEDDISVYLLGTLSINGLFCIGQDRRRGMVNSFRAVLWNPATRESVAIPPSPDESVPPYRDPFFHFHGFGYDHVRDDYKVVRYMSFFNVTDEDEDVPWEDRSYDPVLEIYSLRSNSWRILEIEMCDMPNCDYDQPVTGSGVYMNGACHWWGNNDLYNSTGCLVSFNVSNEVLSTTSMPSDNDVSCDFVAIQRQLVVLNESIALISNCYNTTTFHISILGELGVKESWIKLFIIGPMPPIECPIGVGKKGSVCFKRKDGELVWIDLSSQIIDEIGVKGERFCCQMGIYKENLLPIGRINK*