AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043399.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043399.01.T01 MTR_8g033140 75.300 417 90 5 120 523 3 419 0.0 621
MsG0880043399.01.T01 MTR_8g032980 55.504 427 155 10 124 523 4 422 1.03e-148 433
MsG0880043399.01.T01 MTR_8g033090 52.857 420 169 10 123 522 2 412 3.84e-134 395
MsG0880043399.01.T01 MTR_8g033110 52.459 427 168 12 119 522 1 415 3.08e-131 388
MsG0880043399.01.T01 MTR_1g053510 51.716 408 178 8 123 518 2 402 2.09e-126 375
MsG0880043399.01.T01 MTR_8g046220 51.351 407 181 10 122 518 3 402 2.54e-119 357
MsG0880043399.01.T01 MTR_8g018110 50.611 409 180 12 123 522 2 397 4.73e-117 351
MsG0880043399.01.T01 MTR_8g046200 49.764 424 177 12 123 518 3 418 2.69e-113 342
MsG0880043399.01.T01 MTR_8g046310 49.268 410 157 11 123 518 2 374 3.68e-111 335
MsG0880043399.01.T01 MTR_8g033000 48.670 376 154 13 173 522 1 363 7.00e-102 311
MsG0880043399.01.T01 MTR_0129s0050 41.002 439 186 14 127 523 2 409 5.06e-89 279
MsG0880043399.01.T01 MTR_0129s0070 43.160 424 192 15 119 522 2 396 9.44e-89 278
MsG0880043399.01.T01 MTR_6g086825 41.514 436 190 15 121 522 56 460 8.37e-88 278
MsG0880043399.01.T01 MTR_5g097220 43.095 420 182 14 130 516 7 402 2.63e-85 270
MsG0880043399.01.T01 MTR_8g063440 41.849 411 186 12 132 523 8 384 8.59e-85 268
MsG0880043399.01.T01 MTR_0831s0010 39.953 423 191 14 123 521 37 420 3.51e-84 267
MsG0880043399.01.T01 MTR_5g037680 41.667 420 169 13 132 517 4 381 1.83e-82 264
MsG0880043399.01.T01 MTR_0054s0090 40.046 432 200 15 122 523 5 407 8.27e-82 261
MsG0880043399.01.T01 MTR_2g022000 39.443 431 200 13 119 513 1 406 1.70e-81 261
MsG0880043399.01.T01 MTR_0129s0120 42.222 405 187 14 132 516 13 390 2.30e-81 259
MsG0880043399.01.T01 MTR_2g021800 40.092 434 196 15 119 514 1 408 2.33e-81 259
MsG0880043399.01.T01 MTR_0054s0100 39.359 437 198 15 120 523 7 409 1.33e-80 258
MsG0880043399.01.T01 MTR_2g021770 37.441 422 219 11 129 523 5 408 5.58e-80 256
MsG0880043399.01.T01 MTR_5g097330 38.479 434 208 15 119 523 1 404 2.17e-79 254
MsG0880043399.01.T01 MTR_3g011120 41.000 400 195 10 123 512 2 370 2.52e-79 253
MsG0880043399.01.T01 MTR_5g097680 38.616 448 193 16 127 522 10 427 7.69e-79 253
MsG0880043399.01.T01 MTR_4g117550 40.000 410 178 15 132 522 13 373 2.81e-78 250
MsG0880043399.01.T01 MTR_5g069390 37.778 450 195 16 118 522 8 417 4.99e-78 254
MsG0880043399.01.T01 MTR_2g021950 37.089 426 205 13 119 516 1 391 1.03e-77 249
MsG0880043399.01.T01 MTR_2g038680 40.573 419 206 15 129 521 9 410 1.17e-77 250
MsG0880043399.01.T01 MTR_6g080680 38.863 422 182 12 128 516 11 389 2.47e-77 249
MsG0880043399.01.T01 MTR_6g079770 40.185 433 203 15 126 523 7 418 3.85e-77 249
MsG0880043399.01.T01 MTR_4g102410 39.568 417 195 16 134 520 59 448 7.42e-77 249
MsG0880043399.01.T01 MTR_1g007450 38.177 406 200 11 119 502 1 377 1.40e-76 248
MsG0880043399.01.T01 MTR_0134s0060 40.047 422 195 13 136 521 12 411 1.44e-76 247
MsG0880043399.01.T01 MTR_2g065860 39.387 424 197 13 124 523 2 389 6.43e-75 242
MsG0880043399.01.T01 MTR_4g028510 38.952 439 196 15 119 522 1 402 1.99e-74 243
MsG0880043399.01.T01 MTR_5g096630 38.095 420 200 12 139 523 21 415 4.07e-74 241
MsG0880043399.01.T01 MTR_2g034700 39.447 398 187 12 132 514 10 368 6.17e-74 239
MsG0880043399.01.T01 MTR_8g064890 41.889 413 194 15 127 523 7 389 2.47e-73 238
MsG0880043399.01.T01 MTR_7g017130 37.825 423 207 15 123 522 8 397 2.89e-73 238
MsG0880043399.01.T01 MTR_7g017170 36.866 434 208 15 123 522 8 409 2.50e-72 236
MsG0880043399.01.T01 MTR_1g007410 37.990 408 203 12 132 515 18 399 2.72e-72 236
MsG0880043399.01.T01 MTR_4g130330 36.534 427 201 11 130 522 1 391 5.60e-72 234
MsG0880043399.01.T01 MTR_5g059430 37.500 448 203 18 119 520 8 424 8.08e-72 235
MsG0880043399.01.T01 MTR_8g464770 38.131 396 201 11 132 514 8 372 3.07e-71 232
MsG0880043399.01.T01 MTR_6g461660 38.015 413 205 13 133 522 16 400 6.13e-71 232
MsG0880043399.01.T01 MTR_5g024260 37.923 414 194 11 118 500 4 385 8.87e-71 232
MsG0880043399.01.T01 MTR_6g090180 40.099 404 190 13 127 499 34 416 9.37e-71 233
MsG0880043399.01.T01 MTR_4g028660 38.915 424 198 14 119 514 1 391 1.15e-70 231
MsG0880043399.01.T01 MTR_4g027450 38.915 424 198 14 119 514 1 391 1.15e-70 231
MsG0880043399.01.T01 MTR_4g028680 37.875 433 209 12 119 523 1 401 1.88e-70 231
MsG0880043399.01.T01 MTR_2g065840 37.850 428 201 15 119 521 1 388 3.93e-70 229
MsG0880043399.01.T01 MTR_5g074850 38.038 418 200 15 116 503 18 406 8.36e-70 241
MsG0880043399.01.T01 MTR_2g066200 37.237 427 208 13 119 523 1 389 1.74e-69 228
MsG0880043399.01.T01 MTR_7g017040 37.650 417 200 12 134 522 14 398 2.06e-69 228
MsG0880043399.01.T01 MTR_8g012090 38.701 385 152 11 130 490 10 334 3.44e-69 225
MsG0880043399.01.T01 MTR_8g467670 37.656 401 207 15 134 523 12 380 8.57e-69 226
MsG0880043399.01.T01 MTR_4g028750 37.346 407 198 11 119 499 1 376 1.12e-68 226
MsG0880043399.01.T01 MTR_4g014370 37.188 441 197 14 128 523 5 410 1.29e-68 226
MsG0880043399.01.T01 MTR_4g055820 40.682 381 178 13 122 477 2 359 2.09e-68 224
MsG0880043399.01.T01 MTR_5g096910 37.349 415 200 12 132 521 13 392 3.48e-68 224
MsG0880043399.01.T01 MTR_7g069550 37.089 426 209 16 124 522 2 395 4.00e-68 224
MsG0880043399.01.T01 MTR_2g104340 36.597 429 214 16 119 522 1 396 5.08e-68 224
MsG0880043399.01.T01 MTR_8g041270 37.471 435 207 19 123 522 2 406 1.44e-67 223
MsG0880043399.01.T01 MTR_7g079640 36.058 416 194 12 119 513 1 365 1.87e-67 222
MsG0880043399.01.T01 MTR_6g478230 37.813 439 175 16 131 523 22 408 1.96e-67 223
MsG0880043399.01.T01 MTR_2g066170 38.200 411 202 12 133 523 9 387 3.56e-67 222
MsG0880043399.01.T01 MTR_6g079810 36.449 428 215 13 127 520 57 461 5.99e-67 223
MsG0880043399.01.T01 MTR_5g091140 35.440 443 215 15 82 500 1 396 1.60e-66 221
MsG0880043399.01.T01 MTR_5g092850 36.627 415 203 13 130 514 10 394 1.74e-66 221
MsG0880043399.01.T01 MTR_5g097350 38.889 396 181 15 145 517 25 382 8.08e-66 218
MsG0880043399.01.T01 MTR_8g039500 38.235 374 179 9 133 490 9 346 1.90e-65 216
MsG0880043399.01.T01 MTR_5g075370 36.855 407 196 16 131 503 3 382 2.08e-65 226
MsG0880043399.01.T01 MTR_2g064950 37.897 409 190 15 134 513 8 381 1.12e-64 216
MsG0880043399.01.T01 MTR_2g104280 35.566 433 216 15 124 522 2 405 2.78e-64 215
MsG0880043399.01.T01 MTR_8g035690 40.669 359 144 13 175 521 1 302 3.16e-64 211
MsG0880043399.01.T01 MTR_8g063330 39.418 378 173 13 124 476 2 348 2.36e-63 214
MsG0880043399.01.T01 MTR_2g066150 37.811 402 190 12 133 523 9 361 5.70e-63 210
MsG0880043399.01.T01 MTR_8g013000 39.678 373 171 14 134 479 8 353 8.99e-63 211
MsG0880043399.01.T01 MTR_5g072060 36.856 388 176 11 134 496 4 347 1.26e-61 213
MsG0880043399.01.T01 MTR_4g007940 38.040 347 154 10 204 521 26 340 2.74e-61 205
MsG0880043399.01.T01 MTR_7g111700 37.116 423 170 15 131 523 10 366 3.47e-61 205
MsG0880043399.01.T01 MTR_1g098180 36.342 421 190 12 119 519 1 363 3.76e-60 202
MsG0880043399.01.T01 MTR_5g022850 34.699 415 184 12 128 523 8 354 1.22e-58 198
MsG0880043399.01.T01 MTR_5g043605 36.682 428 152 14 119 519 1 336 2.01e-57 196
MsG0880043399.01.T01 MTR_5g064700 34.422 398 181 15 175 522 1 368 4.56e-56 192
MsG0880043399.01.T01 MTR_1g007430 37.870 338 163 11 147 468 7 313 6.55e-56 190
MsG0880043399.01.T01 MTR_1g050308 33.813 417 181 14 117 523 17 348 1.63e-55 190
MsG0880043399.01.T01 MTR_5g074800 36.290 372 181 16 175 522 1 340 2.37e-52 181
MsG0880043399.01.T01 MTR_6g078010 35.294 374 167 12 173 516 1 329 2.45e-51 179
MsG0880043399.01.T01 MTR_1g047080 34.903 361 146 14 173 522 1 283 2.99e-50 174
MsG0880043399.01.T01 MTR_7g016930 37.644 348 159 12 119 452 1 304 6.43e-50 174
MsG0880043399.01.T01 MTR_6g090250 33.415 410 206 13 156 518 31 420 7.23e-50 177
MsG0880043399.01.T01 MTR_5g096900 37.356 348 149 12 128 444 4 313 1.70e-49 173
MsG0880043399.01.T01 MTR_5g092860 34.688 369 177 14 155 498 21 350 1.96e-48 171
MsG0880043399.01.T01 MTR_6g079790 34.513 339 159 12 218 523 2 310 1.01e-46 165
MsG0880043399.01.T01 MTR_8g063370 32.170 401 218 12 131 513 19 383 1.32e-45 165
MsG0880043399.01.T01 MTR_5g094350 36.334 311 121 11 132 409 9 275 1.89e-44 158
MsG0880043399.01.T01 MTR_5g076490 34.121 381 175 12 173 522 1 336 7.45e-44 158
MsG0880043399.01.T01 MTR_5g068490 35.938 320 145 12 215 523 8 278 9.44e-44 156
MsG0880043399.01.T01 MTR_1g050312 35.127 316 151 9 197 503 7 277 1.07e-43 156
MsG0880043399.01.T01 MTR_6g070880 39.130 253 117 6 133 369 29 260 1.90e-43 155
MsG0880043399.01.T01 MTR_6g071420 39.130 253 117 6 133 369 29 260 1.90e-43 155
MsG0880043399.01.T01 MTR_8g073570 46.784 171 82 5 130 295 4 170 1.05e-42 150
MsG0880043399.01.T01 MTR_5g097820 37.884 293 127 10 123 393 10 269 1.52e-42 153
MsG0880043399.01.T01 MTR_8g063310 32.446 413 204 19 133 513 19 388 4.16e-42 155
MsG0880043399.01.T01 MTR_6g087620 30.422 332 153 7 206 512 1 279 1.44e-41 150
MsG0880043399.01.T01 MTR_5g086590 36.502 263 107 7 250 493 10 231 1.64e-40 146
MsG0880043399.01.T01 MTR_2g021920 35.496 262 133 6 272 516 25 267 6.69e-40 145
MsG0880043399.01.T01 MTR_7g104710 33.851 322 132 11 131 427 12 277 9.90e-38 141
MsG0880043399.01.T01 MTR_8g063350 29.950 404 185 13 131 512 9 336 6.06e-37 140
MsG0880043399.01.T01 MTR_8g064790 47.429 175 85 4 127 296 7 179 3.19e-36 137
MsG0880043399.01.T01 MTR_8g064790 39.474 152 85 3 377 523 189 338 1.73e-19 90.1
MsG0880043399.01.T01 MTR_6g090260 38.318 214 115 6 322 518 47 260 4.59e-36 135
MsG0880043399.01.T01 MTR_6g090260 58.462 65 26 1 123 187 8 71 3.04e-13 70.5
MsG0880043399.01.T01 MTR_1g076810 38.889 252 104 9 133 370 15 230 8.40e-36 142
MsG0880043399.01.T01 MTR_7g023800 31.476 359 169 13 175 513 1 302 8.69e-36 135
MsG0880043399.01.T01 MTR_1g115205 37.906 277 103 12 121 383 14 235 1.34e-35 134
MsG0880043399.01.T01 MTR_5g097850 43.011 186 89 3 353 523 63 246 4.61e-35 132
MsG0880043399.01.T01 MTR_6g004450 40.323 248 108 11 285 521 50 268 9.70e-35 132
MsG0880043399.01.T01 MTR_6g465360 39.357 249 121 9 84 305 1 246 8.62e-34 130
MsG0880043399.01.T01 MTR_5g023970 38.624 189 105 3 346 523 9 197 1.26e-33 126
MsG0880043399.01.T01 MTR_3g019290 39.524 210 79 6 124 323 2 173 1.33e-33 125
MsG0880043399.01.T01 MTR_5g037190 34.694 294 134 11 119 402 1 246 1.40e-33 128
MsG0880043399.01.T01 MTR_3g018750 33.077 260 130 8 285 522 4 241 3.72e-33 126
MsG0880043399.01.T01 MTR_4g016000 38.158 228 88 8 258 471 2 190 1.55e-32 124
MsG0880043399.01.T01 MTR_5g097650 42.604 169 81 4 117 284 3 156 5.32e-31 118
MsG0880043399.01.T01 MTR_2g104260 34.314 306 145 15 119 399 1 275 4.87e-30 119
MsG0880043399.01.T01 MTR_6g009350 38.073 218 86 8 285 484 9 195 4.44e-29 114
MsG0880043399.01.T01 MTR_7g019250 36.364 220 103 6 285 498 225 413 1.23e-28 119
MsG0880043399.01.T01 MTR_3g030620 38.983 177 87 6 364 520 5 180 2.88e-28 111
MsG0880043399.01.T01 MTR_5g096920 39.073 151 84 4 377 520 1 150 2.98e-26 104
MsG0880043399.01.T01 MTR_8g036970 48.551 138 58 7 140 267 2 136 4.38e-26 110
MsG0880043399.01.T01 MTR_8g036970 39.884 173 92 5 340 503 137 306 2.31e-25 108
MsG0880043399.01.T01 MTR_5g096070 40.123 162 68 3 133 291 23 158 4.48e-26 104
MsG0880043399.01.T01 MTR_6g079730 44.030 134 70 4 389 518 14 146 7.46e-26 103
MsG0880043399.01.T01 MTR_4g014370 38.220 191 103 5 345 523 151 338 2.56e-25 107
MsG0880043399.01.T01 MTR_4g014370 43.885 139 69 3 119 252 8 142 3.42e-25 107
MsG0880043399.01.T01 MTR_8g027132 77.273 66 11 1 47 108 61 126 1.27e-24 100
MsG0880043399.01.T01 MTR_5g098950 34.199 231 100 8 255 479 90 274 1.41e-24 103
MsG0880043399.01.T01 MTR_5g066420 39.007 141 71 2 377 502 1 141 2.79e-24 99.4
MsG0880043399.01.T01 MTR_5g064800 82.540 63 10 1 47 108 331 393 7.06e-24 104
MsG0880043399.01.T01 MTR_5g097540 40.288 139 76 3 347 479 96 233 7.92e-24 102
MsG0880043399.01.T01 MTR_3g047580 38.849 139 59 5 133 267 11 127 6.81e-23 94.7
MsG0880043399.01.T01 MTR_8g051775 65.116 86 16 1 46 117 153 238 7.85e-23 98.2
MsG0880043399.01.T01 MTR_5g036250 45.283 106 56 1 417 522 8 111 3.79e-22 94.4
MsG0880043399.01.T01 MTR_1g037540 27.717 368 168 17 139 454 8 329 2.80e-21 96.3
MsG0880043399.01.T01 MTR_2g031720 24.485 388 212 16 139 496 9 345 3.96e-21 95.9
MsG0880043399.01.T01 MTR_4g133170 25.263 380 205 16 139 493 7 332 6.34e-21 95.1
MsG0880043399.01.T01 MTR_7g017150 34.211 190 114 2 344 522 78 267 7.79e-21 92.8
MsG0880043399.01.T01 MTR_7g017120 33.684 190 115 2 344 522 77 266 2.29e-20 91.3
MsG0880043399.01.T01 MTR_7g070440 26.649 379 170 14 136 468 7 323 4.47e-19 89.4
MsG0880043399.01.T01 MTR_5g097660 45.192 104 53 3 415 516 13 114 1.24e-18 82.4
MsG0880043399.01.T01 MTR_1g068860 23.896 385 204 16 139 491 7 334 1.96e-18 87.4
MsG0880043399.01.T01 MTR_0667s0010 23.164 354 194 13 132 456 2 306 2.21e-18 87.8
MsG0880043399.01.T01 MTR_6g065980 25.130 386 199 15 130 496 10 324 2.49e-18 87.0
MsG0880043399.01.T01 MTR_5g091150 30.455 220 86 8 226 437 32 192 2.77e-18 83.6
MsG0880043399.01.T01 MTR_4g028280 67.241 58 17 1 46 103 9 64 9.09e-18 78.6
MsG0880043399.01.T01 MTR_3g083010 25.070 359 176 15 139 453 9 318 1.44e-17 85.5
MsG0880043399.01.T01 MTR_1g068875 24.737 380 208 17 139 493 7 333 1.69e-17 84.7
MsG0880043399.01.T01 MTR_3g006670 25.731 342 185 16 139 461 52 343 1.81e-17 85.1
MsG0880043399.01.T01 MTR_2g426070 23.000 400 207 17 144 496 14 359 2.35e-17 84.7
MsG0880043399.01.T01 MTR_2g028140 25.337 371 179 18 133 456 2 321 2.71e-17 84.7
MsG0880043399.01.T01 MTR_3g014540 25.815 368 190 14 139 483 32 339 3.31e-17 84.0
MsG0880043399.01.T01 MTR_2g021150 24.928 349 184 14 136 460 14 308 3.62e-17 83.6
MsG0880043399.01.T01 MTR_2g426090 24.058 345 182 13 144 456 14 310 4.87e-17 83.6
MsG0880043399.01.T01 MTR_2g078900 25.414 362 192 16 139 483 36 336 7.01e-17 82.8
MsG0880043399.01.T01 MTR_4g061340 24.928 345 198 13 139 468 29 327 9.50e-17 82.4
MsG0880043399.01.T01 MTR_2g022020 41.121 107 58 2 413 518 14 116 1.12e-16 76.6
MsG0880043399.01.T01 MTR_3g009310 25.410 366 192 16 139 483 45 350 1.53e-16 82.0
MsG0880043399.01.T01 MTR_2g025420 24.185 368 175 14 139 456 9 322 3.00e-16 81.3
MsG0880043399.01.T01 MTR_5g048160 25.481 416 240 18 139 518 7 388 6.45e-16 80.1
MsG0880043399.01.T01 MTR_5g049560 35.811 148 75 4 173 300 1 148 8.18e-16 78.2
MsG0880043399.01.T01 MTR_5g011200 22.011 368 226 10 128 482 9 328 1.15e-15 79.3
MsG0880043399.01.T01 MTR_3g007410 26.667 375 169 19 144 483 60 363 1.15e-15 79.3
MsG0880043399.01.T01 MTR_5g096050 50.633 79 33 2 386 459 27 104 2.03e-15 73.2
MsG0880043399.01.T01 MTR_8g041440 46.809 94 34 2 130 223 9 86 2.97e-15 72.4
MsG0880043399.01.T01 MTR_3g013740 22.857 385 214 14 128 483 36 366 4.19e-15 77.8
MsG0880043399.01.T01 MTR_3g036290 24.165 389 199 17 119 483 1 317 7.97e-15 76.3
MsG0880043399.01.T01 MTR_5g086780 45.679 81 44 0 417 497 148 228 8.77e-15 74.3
MsG0880043399.01.T01 MTR_5g086780 71.111 45 13 0 134 178 14 58 2.37e-12 67.0
MsG0880043399.01.T01 MTR_3g013770 24.064 374 193 15 139 483 36 347 2.41e-14 75.1
MsG0880043399.01.T01 MTR_2g028110 25.320 391 201 20 139 496 7 339 3.63e-14 74.7
MsG0880043399.01.T01 MTR_2g031640 24.928 349 169 15 139 456 9 295 5.21e-14 74.3
MsG0880043399.01.T01 MTR_4g024890 26.048 334 192 15 138 454 12 307 5.84e-14 73.9
MsG0880043399.01.T01 MTR_7g055930 27.624 362 197 17 131 454 8 342 9.31e-14 73.6
MsG0880043399.01.T01 MTR_5g056020 22.326 430 278 13 127 517 8 420 1.98e-13 73.2
MsG0880043399.01.T01 MTR_8g090195 57.895 57 24 0 439 495 57 113 4.38e-13 66.2
MsG0880043399.01.T01 MTR_7g055870 26.648 364 198 17 131 454 8 342 7.76e-13 70.9
MsG0880043399.01.T01 MTR_3g014570 24.119 369 195 13 139 483 32 339 1.41e-12 69.7
MsG0880043399.01.T01 MTR_7g101200 27.386 241 108 11 254 478 39 228 1.46e-12 67.8
MsG0880043399.01.T01 MTR_2g029990 23.204 362 207 13 139 483 54 361 4.79e-12 68.2
MsG0880043399.01.T01 MTR_4g117770 29.048 210 127 8 127 326 2 199 5.42e-12 67.8
MsG0880043399.01.T01 MTR_4g117810 29.048 210 127 8 127 326 2 199 5.42e-12 67.8
MsG0880043399.01.T01 MTR_1g050305 46.429 84 40 2 422 500 21 104 1.10e-11 63.2
MsG0880043399.01.T01 MTR_6g048140 24.033 362 197 16 144 483 47 352 1.51e-11 66.6
MsG0880043399.01.T01 MTR_3g096280 24.523 367 198 14 148 503 17 315 1.70e-11 66.2
MsG0880043399.01.T01 MTR_7g061060 22.424 330 209 12 139 454 16 312 1.80e-11 66.6
MsG0880043399.01.T01 MTR_2g021050 23.599 339 177 11 139 456 8 285 2.03e-11 66.2
MsG0880043399.01.T01 MTR_3g011060 25.876 371 206 19 139 488 31 353 2.30e-11 65.9
MsG0880043399.01.T01 MTR_3g030350 23.562 365 213 16 139 492 38 347 2.61e-11 65.9
MsG0880043399.01.T01 MTR_2g055970 24.372 398 227 16 69 456 163 496 4.63e-11 65.9
MsG0880043399.01.T01 MTR_8g073550 26.103 272 136 10 123 377 7 230 4.65e-11 63.5
MsG0880043399.01.T01 MTR_3g097190 48.148 54 28 0 441 494 28 81 6.52e-11 62.0
MsG0880043399.01.T01 MTR_2g426020 22.099 362 175 11 139 456 9 307 7.36e-11 64.7
MsG0880043399.01.T01 MTR_2g054930 77.778 36 8 0 73 108 36 71 9.02e-11 58.9
MsG0880043399.01.T01 MTR_7g056710 23.352 364 196 14 119 454 1 309 9.30e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043399.01.T01 AT3G16210 30.233 172 88 5 133 298 2 147 1.55e-13 72.4
MsG0880043399.01.T01 AT1G48060 25.907 193 128 5 139 329 29 208 2.31e-12 67.4
MsG0880043399.01.T01 AT3G10240 21.173 307 193 10 139 441 30 291 3.57e-11 65.5

Find 115 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATATACTTTGAAGATAAT+TGG 0.140833 8:+24234263 MsG0880043399.01.T01:CDS
CCTCATTTGAAGATAGAATT+AGG 0.141295 8:+24234566 MsG0880043399.01.T01:CDS
CCAATTATCTTCAAAGTATA+TGG 0.176119 8:-24234263 None:intergenic
TTATTTGCACATATGGATTT+TGG 0.178055 8:+24234654 MsG0880043399.01.T01:CDS
AAGGAAAACCATCTTTCTTT+TGG 0.237322 8:+24234886 MsG0880043399.01.T01:CDS
GCATGGATTTGTCTGTTTCT+TGG 0.241676 8:+24234437 MsG0880043399.01.T01:CDS
AAAATATCACGAAACATATA+AGG 0.243002 8:-24234334 None:intergenic
AGGAATATAGATCAACATTT+AGG 0.244077 8:+24228340 MsG0880043399.01.T01:CDS
GGTTGCTTGCCACTTGCTTT+AGG 0.252179 8:-24233937 None:intergenic
GAGAGATTTAAGAGGCAATT+TGG 0.264193 8:-24233789 None:intergenic
AACAATAGATATTGACAAAA+TGG 0.272513 8:-24230581 None:intergenic
ACCTTATAGTCATTTGTAAC+AGG 0.279158 8:-24234220 None:intergenic
CTCCAATTTCCTCAATCCTT+TGG 0.293427 8:-24234822 None:intergenic
TGGACTAAACTCTTTGTTCT+TGG 0.295105 8:+24234700 MsG0880043399.01.T01:CDS
TCTATACAAATTTCAATTCA+TGG 0.301488 8:+24233688 MsG0880043399.01.T01:CDS
ATGTGTTCTTCCAGTGTTAA+TGG 0.310005 8:+24234058 MsG0880043399.01.T01:CDS
TCCAATTTCCTCAATCCTTT+GGG 0.330589 8:-24234821 None:intergenic
CCCTGTTACAAATGACTATA+AGG 0.330937 8:+24234219 MsG0880043399.01.T01:CDS
CAAATGACTATAAGGTGATT+AGG 0.334244 8:+24234227 MsG0880043399.01.T01:CDS
CTCATTTGAAGATAGAATTA+GGG 0.335824 8:+24234567 MsG0880043399.01.T01:CDS
TTTAGCTATGCGGAAGGGTT+TGG 0.343354 8:+24230773 MsG0880043399.01.T01:CDS
AGACCGGTTATTTGCACATA+TGG 0.349921 8:+24234647 MsG0880043399.01.T01:CDS
ACCCAAAGGATTGAGGAAAT+TGG 0.352089 8:+24234820 MsG0880043399.01.T01:CDS
GAGTGACTGTGATGTTATTA+AGG 0.366377 8:+24228320 MsG0880043399.01.T01:CDS
AGAGTGTTAGTACGTGTTGA+TGG 0.372756 8:+24230541 MsG0880043399.01.T01:intron
TGTCAATATCTATTGTTCAT+TGG 0.387173 8:+24230587 MsG0880043399.01.T01:CDS
AGGCTATATATCTCCCAAAA+AGG 0.389899 8:-24234388 None:intergenic
ACCTTGAATTCCTTGGTGGC+TGG 0.412444 8:-24234127 None:intergenic
AACATTTAGGATTATGCAAT+GGG 0.416955 8:+24228353 MsG0880043399.01.T01:CDS
ATCTATAATGTCGTCGAGAC+CGG 0.417787 8:+24234631 MsG0880043399.01.T01:CDS
GATTTGTCTGTTTCTTGGTA+TGG 0.435988 8:+24234442 MsG0880043399.01.T01:CDS
AATCCATATGTGCAAATAAC+CGG 0.446717 8:-24234650 None:intergenic
TTAAACTCAATGTTCTCATA+TGG 0.448972 8:-24234169 None:intergenic
AAGAAGATGACGAGATAGCC+TGG 0.463312 8:+24234785 MsG0880043399.01.T01:CDS
GGTTGTCTAATGCAAGGTAC+AGG 0.464632 8:-24234724 None:intergenic
ACCTCACTGTACACGCTGTC+CGG 0.466712 8:+24233962 MsG0880043399.01.T01:CDS
CTTGCATTAGACAACCTATC+GGG 0.471293 8:+24234731 MsG0880043399.01.T01:CDS
TTTGGGTGAGCTTGGTGTGA+AGG 0.472234 8:+24234672 MsG0880043399.01.T01:CDS
AGGAACAACCTTGAATTCCT+TGG 0.475065 8:-24234134 None:intergenic
AAGCTTAATGTTGACGCAGC+AGG 0.475512 8:+24230634 MsG0880043399.01.T01:CDS
ACAGACTTGGCGGTGTTACA+TGG 0.476979 8:+24234595 MsG0880043399.01.T01:CDS
AAATATCACGAAACATATAA+GGG 0.478547 8:-24234333 None:intergenic
ACTTGAATGAATTGTGTCAT+TGG 0.480525 8:+24234479 MsG0880043399.01.T01:CDS
ATAGCCTCAGAAGTAACTCT+TGG 0.482779 8:+24234404 MsG0880043399.01.T01:CDS
TCATTCCTCCAAAAGAAAGA+TGG 0.486499 8:-24234894 None:intergenic
GAGAACATTGAGTTTAATCC+TGG 0.487591 8:+24234175 MsG0880043399.01.T01:CDS
TCTATCTTCAAATGAGGGTA+AGG 0.488207 8:-24234560 None:intergenic
TCCAGCCACCAAGGAATTCA+AGG 0.493142 8:+24234126 MsG0880043399.01.T01:CDS
CAATTATCTTCAAAGTATAT+GGG 0.494014 8:-24234262 None:intergenic
GCCTCAGAAGTAACTCTTGG+AGG 0.494079 8:+24234407 MsG0880043399.01.T01:CDS
TTTACGTACCCAAAGGATTG+AGG 0.495005 8:+24234813 MsG0880043399.01.T01:CDS
AGCTTGGTGTGAAGGTATCA+TGG 0.504545 8:+24234680 MsG0880043399.01.T01:CDS
CCTAATTCTATCTTCAAATG+AGG 0.509672 8:-24234566 None:intergenic
AGCTTATAGAAATCACTAAA+CGG 0.510217 8:-24230616 None:intergenic
AAAATTTGTGCTAGAGGGAA+AGG 0.511046 8:+24228402 MsG0880043399.01.T01:CDS
TGCTTGCCACTTGCTTTAGG+AGG 0.515120 8:-24233934 None:intergenic
TGACGCAGCAGGTCCGATAG+AGG 0.517732 8:+24230645 MsG0880043399.01.T01:CDS
TAAGTTACAATCTGCAACCA+AGG 0.521060 8:-24234862 None:intergenic
AACAACCTTGAATTCCTTGG+TGG 0.521176 8:-24234131 None:intergenic
GTTGCAGATTGTAACTTACA+AGG 0.521224 8:+24234867 MsG0880043399.01.T01:CDS
AATCGTGTGAGAGATTTAAG+AGG 0.524854 8:-24233797 None:intergenic
GGGTCATAACCAAATGCAAA+AGG 0.525055 8:-24234199 None:intergenic
CAATGTTCTCATATGGCTGA+TGG 0.527465 8:-24234162 None:intergenic
GAATGAATTGTGTCATTGGC+TGG 0.528627 8:+24234483 MsG0880043399.01.T01:CDS
CTCTTTATTCTTACCCCGAT+AGG 0.532170 8:-24234745 None:intergenic
TTAAAGCAGATTCAAAACCT+TGG 0.538111 8:+24234845 MsG0880043399.01.T01:CDS
CAACATTTAGGATTATGCAA+TGG 0.543699 8:+24228352 MsG0880043399.01.T01:CDS
TGCCGCAAAATATAAGAAGA+AGG 0.546424 8:+24233718 MsG0880043399.01.T01:CDS
GTCATTTGACTTTAGCAATG+AGG 0.546542 8:+24234522 MsG0880043399.01.T01:CDS
GGCGTTCTTTGTCTCTCTTG+TGG 0.552760 8:+24234079 MsG0880043399.01.T01:CDS
CTCTTGGAGGAAACTTAGCA+TGG 0.555146 8:+24234420 MsG0880043399.01.T01:CDS
CTAATTCTATCTTCAAATGA+GGG 0.556776 8:-24234565 None:intergenic
ATGTTCATTACCAGATTCAG+AGG 0.559607 8:+24230740 MsG0880043399.01.T01:intron
TAGGATTATGCAATGGGACA+AGG 0.560351 8:+24228359 MsG0880043399.01.T01:CDS
ACAAAGAACGCCATTAACAC+TGG 0.561617 8:-24234068 None:intergenic
TAGGGCGAAAACAGACTTGG+CGG 0.564334 8:+24234585 MsG0880043399.01.T01:CDS
ATGTGAAAATTTGTGCTAGA+GGG 0.565828 8:+24228397 MsG0880043399.01.T01:CDS
TTGGGTACGTAAATCAATCC+AGG 0.566224 8:-24234803 None:intergenic
TAACCAAATGCAAAAGGACC+AGG 0.567603 8:-24234193 None:intergenic
TCATTCGCATGAAGAGGTGA+TGG 0.571870 8:-24234019 None:intergenic
AATGAGTCATTCGCATGAAG+AGG 0.572317 8:-24234025 None:intergenic
TCTATTCTCAAATTTCTCAC+CGG 0.577229 8:-24233981 None:intergenic
CCTTGCATTAGACAACCTAT+CGG 0.582349 8:+24234730 MsG0880043399.01.T01:CDS
AATTAGGGCGAAAACAGACT+TGG 0.587739 8:+24234582 MsG0880043399.01.T01:CDS
ACCCACTTATCACCCTCTAT+CGG 0.587985 8:-24230658 None:intergenic
GAAGATTTAGCTATGCGGAA+GGG 0.594772 8:+24230768 MsG0880043399.01.T01:CDS
CCTTATAGTCATTTGTAACA+GGG 0.597553 8:-24234219 None:intergenic
GATGTGAAAATTTGTGCTAG+AGG 0.599558 8:+24228396 MsG0880043399.01.T01:CDS
AGAAGATTTAGCTATGCGGA+AGG 0.606958 8:+24230767 MsG0880043399.01.T01:CDS
GACGCAGCAGGTCCGATAGA+GGG 0.607065 8:+24230646 MsG0880043399.01.T01:CDS
AGAATCAGATGCTTCTAATG+TGG 0.612948 8:+24230833 MsG0880043399.01.T01:CDS
GGATTGATTTACGTACCCAA+AGG 0.614386 8:+24234806 MsG0880043399.01.T01:CDS
GTTGTCTAATGCAAGGTACA+GGG 0.616779 8:-24234723 None:intergenic
TTGTGTCCTCCTAAAGCAAG+TGG 0.619589 8:+24233928 MsG0880043399.01.T01:CDS
ATTATGCAATGGGACAAGGC+TGG 0.621777 8:+24228363 MsG0880043399.01.T01:CDS
GTGTCATTGGCTGGTAAATG+TGG 0.623157 8:+24234492 MsG0880043399.01.T01:CDS
TCCACAGTGCAATGGTTACG+TGG 0.625594 8:-24234102 None:intergenic
GGCGGTGTTACATGGATCTG+TGG 0.626352 8:+24234603 MsG0880043399.01.T01:CDS
GGCTGGATTCCACAGTGCAA+TGG 0.626915 8:-24234110 None:intergenic
GTGTTGATGGAGACACTAAG+TGG 0.632551 8:+24230554 MsG0880043399.01.T01:CDS
CCGATAGGTTGTCTAATGCA+AGG 0.634099 8:-24234730 None:intergenic
TCCTCCAAGAGTTACTTCTG+AGG 0.634400 8:-24234408 None:intergenic
TTGGCTGGTAAATGTGGACA+TGG 0.636231 8:+24234498 MsG0880043399.01.T01:CDS
ACTGTGGAATCCAGCCACCA+AGG 0.667020 8:+24234117 MsG0880043399.01.T01:CDS
GGACAAGGCTGGTTATAACA+AGG 0.667041 8:+24228374 MsG0880043399.01.T01:CDS
TTGCATTAGACAACCTATCG+GGG 0.677178 8:+24234732 MsG0880043399.01.T01:CDS
TCATATGGCTGATGGCTACG+AGG 0.689687 8:-24234154 None:intergenic
ATACAAATTTCAATTCATGG+CGG 0.701250 8:+24233691 MsG0880043399.01.T01:CDS
ACAGCGTGTACAGTGAGGTG+TGG 0.706156 8:-24233958 None:intergenic
TAGATAGTAAGATATTGGTG+CGG 0.709652 8:-24233880 None:intergenic
ACCGGACAGCGTGTACAGTG+AGG 0.711525 8:-24233963 None:intergenic
TTATAGAAATCACTAAACGG+AGG 0.717371 8:-24230613 None:intergenic
TTGATGGAGACACTAAGTGG+AGG 0.733638 8:+24230557 MsG0880043399.01.T01:CDS
TTGCAGAAGATTTAGCTATG+CGG 0.744055 8:+24230763 MsG0880043399.01.T01:CDS
GCCACGTAACCATTGCACTG+TGG 0.771494 8:+24234101 MsG0880043399.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAATTATTTATTGTAAA+AGG + Chr8:24229471-24229490 MsG0880043399.01.T01:intron 10.0%
!! AAGAATTATTTATTGTAAAA+GGG + Chr8:24229472-24229491 MsG0880043399.01.T01:intron 10.0%
!! CTAAAAATGTATTAAAATAA+AGG + Chr8:24230121-24230140 MsG0880043399.01.T01:intron 10.0%
!! TTATAATATTCTAATAACTA+CGG - Chr8:24233194-24233213 None:intergenic 10.0%
!!! AATACATCTTTATTTTATTA+CGG - Chr8:24229603-24229622 None:intergenic 10.0%
!!! AATTTTTAAAAGATAATACA+AGG + Chr8:24229651-24229670 MsG0880043399.01.T01:intron 10.0%
!! AAAAAAAAATTCACTAATCA+CGG - Chr8:24232186-24232205 None:intergenic 15.0%
!! AAAAACACTATAATAAAAAC+CGG + Chr8:24231317-24231336 MsG0880043399.01.T01:intron 15.0%
!! AAATAAAGGTAAATAAAAAG+AGG + Chr8:24230135-24230154 MsG0880043399.01.T01:intron 15.0%
!! ATAATTAGAAGTTGAATTAT+AGG + Chr8:24233240-24233259 MsG0880043399.01.T01:intron 15.0%
!! ATCTATTAGAAATAACAAAT+TGG - Chr8:24231296-24231315 None:intergenic 15.0%
!! ATGATTTCAATAAAAAAAGT+AGG - Chr8:24229110-24229129 None:intergenic 15.0%
!! CAATATAACATTCATATATT+TGG - Chr8:24228784-24228803 None:intergenic 15.0%
!! TATTAATAAAGATGTCATTA+CGG + Chr8:24231796-24231815 MsG0880043399.01.T01:intron 15.0%
!! TCATTAACTTTCATAATTAA+AGG + Chr8:24232668-24232687 MsG0880043399.01.T01:intron 15.0%
!! TGATTTCAATAAAAAAAGTA+GGG - Chr8:24229109-24229128 None:intergenic 15.0%
!! TTCGAATTTATCATAAATAA+CGG + Chr8:24228743-24228762 MsG0880043399.01.T01:intron 15.0%
!! TTTAGATACATCAATATAAA+AGG + Chr8:24232499-24232518 MsG0880043399.01.T01:intron 15.0%
!! TTTATTGAAATCATGTTTAT+TGG + Chr8:24229116-24229135 MsG0880043399.01.T01:intron 15.0%
!!! ATACATCTTTATTTTATTAC+GGG - Chr8:24229602-24229621 None:intergenic 15.0%
!!! ATTAAGTTAATGTGTTTTAT+CGG + Chr8:24233317-24233336 MsG0880043399.01.T01:intron 15.0%
!!! ATTTTTAGATAGTAAGATAT+TGG - Chr8:24233888-24233907 None:intergenic 15.0%
!!! CTTTTATTCTATATTTTTCT+TGG - Chr8:24230178-24230197 None:intergenic 15.0%
!!! GATTAGTGAATTTTTTTTTA+AGG + Chr8:24232187-24232206 MsG0880043399.01.T01:intron 15.0%
!!! TATTTTATAATATGACAAGA+TGG + Chr8:24231940-24231959 MsG0880043399.01.T01:intron 15.0%
!!! TCATTTTTCATATGTTTTTT+TGG - Chr8:24229940-24229959 None:intergenic 15.0%
!!! TTTTTTTTTAAGGATAGATT+AGG + Chr8:24232197-24232216 MsG0880043399.01.T01:intron 15.0%
!! AAAAAAAATTCACTAATCAC+GGG - Chr8:24232185-24232204 None:intergenic 20.0%
!! AAAAGAGTAAATATATGTTG+AGG + Chr8:24233117-24233136 MsG0880043399.01.T01:intron 20.0%
!! AAAATATCACGAAACATATA+AGG - Chr8:24234337-24234356 None:intergenic 20.0%
!! AAATATCACGAAACATATAA+GGG - Chr8:24234336-24234355 None:intergenic 20.0%
!! AAATCAAAGAATAATTCGAT+AGG + Chr8:24231266-24231285 MsG0880043399.01.T01:intron 20.0%
!! AACAATAGATATTGACAAAA+TGG - Chr8:24230584-24230603 None:intergenic 20.0%
!! AATCAAAGAATAATTCGATA+GGG + Chr8:24231267-24231286 MsG0880043399.01.T01:intron 20.0%
!! AGTCTTCTATTTATAAATCA+AGG + Chr8:24229232-24229251 MsG0880043399.01.T01:intron 20.0%
!! ATCGAAATAGATAAAATGAA+GGG - Chr8:24231597-24231616 None:intergenic 20.0%
!! ATTAATAAAGATGTCATTAC+GGG + Chr8:24231797-24231816 MsG0880043399.01.T01:intron 20.0%
!! CAATTATCTTCAAAGTATAT+GGG - Chr8:24234265-24234284 None:intergenic 20.0%
!! GAAAAAACTAATGATAAATC+CGG + Chr8:24231498-24231517 MsG0880043399.01.T01:intron 20.0%
!! GTTATTTAAGAAAATCTCAA+AGG - Chr8:24231538-24231557 None:intergenic 20.0%
!! TAAGAATTTAGATTGCATAT+GGG + Chr8:24231011-24231030 MsG0880043399.01.T01:intron 20.0%
!! TATCGAAATAGATAAAATGA+AGG - Chr8:24231598-24231617 None:intergenic 20.0%
!! TCTATACAAATTTCAATTCA+TGG + Chr8:24233688-24233707 MsG0880043399.01.T01:CDS 20.0%
!! TTAAGAATTTAGATTGCATA+TGG + Chr8:24231010-24231029 MsG0880043399.01.T01:intron 20.0%
!! TTATTTATTGCTCTATTTGT+TGG - Chr8:24233596-24233615 None:intergenic 20.0%
!! TTTCTTTAACACTTATGAAA+AGG - Chr8:24230372-24230391 None:intergenic 20.0%
!!! AGAAATAAGAAATGTTTTGA+GGG + Chr8:24230460-24230479 MsG0880043399.01.T01:intron 20.0%
!!! AGACAAAATTGTATTTTTGT+TGG + Chr8:24233158-24233177 MsG0880043399.01.T01:intron 20.0%
!!! ATATGTTTCGTGATATTTTT+TGG + Chr8:24234338-24234357 MsG0880043399.01.T01:CDS 20.0%
!!! ATTGATTTTTATGACATGAT+AGG + Chr8:24229016-24229035 MsG0880043399.01.T01:intron 20.0%
!!! ATTTCCTTTTATACTTAATC+CGG + Chr8:24229159-24229178 MsG0880043399.01.T01:intron 20.0%
!!! ATTTTTCTTGACAAGTATTA+TGG + Chr8:24228871-24228890 MsG0880043399.01.T01:intron 20.0%
!!! GTTTAAATTTTTTGCATGTT+AGG + Chr8:24230944-24230963 MsG0880043399.01.T01:intron 20.0%
!!! TAGAAATAAGAAATGTTTTG+AGG + Chr8:24230459-24230478 MsG0880043399.01.T01:intron 20.0%
!!! TATGTTTCGTGATATTTTTT+GGG + Chr8:24234339-24234358 MsG0880043399.01.T01:CDS 20.0%
!!! TGTTTTAAGAGAGAAAAAAT+AGG + Chr8:24233348-24233367 MsG0880043399.01.T01:intron 20.0%
!!! TTGTTATTAGATATTTGAAG+TGG + Chr8:24231747-24231766 MsG0880043399.01.T01:intron 20.0%
!!! TTTAAGAGAGAAAAAGTATA+AGG + Chr8:24232847-24232866 MsG0880043399.01.T01:intron 20.0%
!!! TTTTTCATATGTTTTTTTGG+TGG - Chr8:24229937-24229956 None:intergenic 20.0%
! AAATATTATTGATGTCGATG+AGG + Chr8:24230390-24230409 MsG0880043399.01.T01:intron 25.0%
! ACGTGTCAAAATATTAAGAA+GGG + Chr8:24233413-24233432 MsG0880043399.01.T01:intron 25.0%
! AGCTTATAGAAATCACTAAA+CGG - Chr8:24230619-24230638 None:intergenic 25.0%
! AGGAATATAGATCAACATTT+AGG + Chr8:24228340-24228359 MsG0880043399.01.T01:CDS 25.0%
! AGGTGTCAAAATGTTAATAT+GGG + Chr8:24232623-24232642 MsG0880043399.01.T01:intron 25.0%
! ATACAAATTTCAATTCATGG+CGG + Chr8:24233691-24233710 MsG0880043399.01.T01:CDS 25.0%
! ATAGATTTCTCTTGTTCTTA+AGG + Chr8:24233486-24233505 MsG0880043399.01.T01:intron 25.0%
! ATATCCGGATTAAGTATAAA+AGG - Chr8:24229166-24229185 None:intergenic 25.0%
! ATGACTATTAATAAGAGTCA+AGG + Chr8:24228549-24228568 MsG0880043399.01.T01:intron 25.0%
! ATGTAAGTCCTATCATAAAT+AGG - Chr8:24228824-24228843 None:intergenic 25.0%
! ATTTGAGCAAAATCTTACAT+CGG - Chr8:24229303-24229322 None:intergenic 25.0%
! CAAAAGGTAAATATATGTTC+AGG + Chr8:24232603-24232622 MsG0880043399.01.T01:intron 25.0%
! CATATGTGAAGAACAATTAA+TGG - Chr8:24232125-24232144 None:intergenic 25.0%
! CATGAAAATATTGTCATATC+CGG - Chr8:24229181-24229200 None:intergenic 25.0%
! CCAATTATCTTCAAAGTATA+TGG - Chr8:24234266-24234285 None:intergenic 25.0%
! CTAATTCTATCTTCAAATGA+GGG - Chr8:24234568-24234587 None:intergenic 25.0%
! CTCATTTGAAGATAGAATTA+GGG + Chr8:24234567-24234586 MsG0880043399.01.T01:CDS 25.0%
! CTTACTATCTAAAAATGATG+AGG + Chr8:24233892-24233911 MsG0880043399.01.T01:CDS 25.0%
! GTAATATCTGGAAGTAATAT+CGG + Chr8:24228424-24228443 MsG0880043399.01.T01:intron 25.0%
! GTCAATCATTAAAACATGTT+GGG + Chr8:24228571-24228590 MsG0880043399.01.T01:intron 25.0%
! GTTTAGATCCTATTTATGAT+AGG + Chr8:24228813-24228832 MsG0880043399.01.T01:intron 25.0%
! TAGATTTCTCTTGTTCTTAA+GGG + Chr8:24233487-24233506 MsG0880043399.01.T01:intron 25.0%
! TATAGTTGTACATTCATACA+CGG - Chr8:24231825-24231844 None:intergenic 25.0%
! TATTTATGATAGGACTTACA+TGG + Chr8:24228823-24228842 MsG0880043399.01.T01:intron 25.0%
! TGTCAATATCTATTGTTCAT+TGG + Chr8:24230587-24230606 MsG0880043399.01.T01:CDS 25.0%
! TTAAACTCAATGTTCTCATA+TGG - Chr8:24234172-24234191 None:intergenic 25.0%
! TTACTTTGACACAAATAATG+TGG - Chr8:24231170-24231189 None:intergenic 25.0%
! TTATAAATCAAGGCCAAATA+GGG + Chr8:24229242-24229261 MsG0880043399.01.T01:intron 25.0%
! TTATTGTAAAAGGGATTAAG+TGG + Chr8:24229481-24229500 MsG0880043399.01.T01:intron 25.0%
! TTTATAAATCAAGGCCAAAT+AGG + Chr8:24229241-24229260 MsG0880043399.01.T01:intron 25.0%
! TTTGTAACAAAAGATCCTAT+TGG - Chr8:24232578-24232597 None:intergenic 25.0%
! TTTGTTACAAAAGACACAAA+AGG + Chr8:24232587-24232606 MsG0880043399.01.T01:intron 25.0%
!! AACATTTAGGATTATGCAAT+GGG + Chr8:24228353-24228372 MsG0880043399.01.T01:CDS 25.0%
!! AACCTTCTTCTTATATTTTG+CGG - Chr8:24233723-24233742 None:intergenic 25.0%
!! CCATATACTTTGAAGATAAT+TGG + Chr8:24234263-24234282 MsG0880043399.01.T01:CDS 25.0%
!! GACACAAAAGGATATAATTT+TGG + Chr8:24232884-24232903 MsG0880043399.01.T01:intron 25.0%
!! TATTTGCACATATGGATTTT+GGG + Chr8:24234655-24234674 MsG0880043399.01.T01:CDS 25.0%
!! TTATTTGCACATATGGATTT+TGG + Chr8:24234654-24234673 MsG0880043399.01.T01:CDS 25.0%
!!! CATGATATTTTTAGCATGTT+TGG - Chr8:24229391-24229410 None:intergenic 25.0%
!!! GAAATAAGAAATGTTTTGAG+GGG + Chr8:24230461-24230480 MsG0880043399.01.T01:intron 25.0%
!!! TGGGCTATAATTTTTTTTTG+AGG + Chr8:24229770-24229789 MsG0880043399.01.T01:intron 25.0%
AAGAGAGAAAAAATAGGAGA+AGG + Chr8:24233354-24233373 MsG0880043399.01.T01:intron 30.0%
AAGATATTGATAAGCGATAG+AGG + Chr8:24228672-24228691 MsG0880043399.01.T01:intron 30.0%
AATAATAGAGCCAACATAGT+TGG - Chr8:24230890-24230909 None:intergenic 30.0%
AATCCATATGTGCAAATAAC+CGG - Chr8:24234653-24234672 None:intergenic 30.0%
ACCAATGACATTTCATAAAG+AGG - Chr8:24230285-24230304 None:intergenic 30.0%
ACCTCTTTATGAAATGTCAT+TGG + Chr8:24230281-24230300 MsG0880043399.01.T01:intron 30.0%
ACCTTATAGTCATTTGTAAC+AGG - Chr8:24234223-24234242 None:intergenic 30.0%
ACTTATGAAAAGGAACATAC+TGG - Chr8:24230362-24230381 None:intergenic 30.0%
ACTTGAATGAATTGTGTCAT+TGG + Chr8:24234479-24234498 MsG0880043399.01.T01:CDS 30.0%
AGGACAATGCATAATATATG+CGG + Chr8:24229889-24229908 MsG0880043399.01.T01:intron 30.0%
ATAAACTATAACTATCCGCA+CGG - Chr8:24228931-24228950 None:intergenic 30.0%
ATAATAGAGCCAACATAGTT+GGG - Chr8:24230889-24230908 None:intergenic 30.0%
ATAGTTGTACATTCATACAC+GGG - Chr8:24231824-24231843 None:intergenic 30.0%
ATGTGAAAATTTGTGCTAGA+GGG + Chr8:24228397-24228416 MsG0880043399.01.T01:CDS 30.0%
ATTGATGTTCCTCATGTATA+CGG - Chr8:24229717-24229736 None:intergenic 30.0%
CAAAGAGATCAAGATATGAA+GGG - Chr8:24228969-24228988 None:intergenic 30.0%
CAAATGACTATAAGGTGATT+AGG + Chr8:24234227-24234246 MsG0880043399.01.T01:CDS 30.0%
CAATTCCATTAATGATAGTC+TGG - Chr8:24231087-24231106 None:intergenic 30.0%
CAGGTGTCAAAATGTTAATA+TGG + Chr8:24232622-24232641 MsG0880043399.01.T01:intron 30.0%
CCTAATTCTATCTTCAAATG+AGG - Chr8:24234569-24234588 None:intergenic 30.0%
CCTCATTTGAAGATAGAATT+AGG + Chr8:24234566-24234585 MsG0880043399.01.T01:CDS 30.0%
CCTTATAGTCATTTGTAACA+GGG - Chr8:24234222-24234241 None:intergenic 30.0%
CGTGTCAAAATATTAAGAAG+GGG + Chr8:24233414-24233433 MsG0880043399.01.T01:intron 30.0%
GACGTGTCAAAATATTAAGA+AGG + Chr8:24233412-24233431 MsG0880043399.01.T01:intron 30.0%
GGAACATGTTCATGAAAAAA+GGG - Chr8:24233862-24233881 None:intergenic 30.0%
GGTCAATCATTAAAACATGT+TGG + Chr8:24228570-24228589 MsG0880043399.01.T01:intron 30.0%
GGTGTCAAAATGTTAATATG+GGG + Chr8:24232624-24232643 MsG0880043399.01.T01:intron 30.0%
GTTGAAGTAAAAGACACAAA+AGG + Chr8:24233376-24233395 MsG0880043399.01.T01:intron 30.0%
TAGATAGTAAGATATTGGTG+CGG - Chr8:24233883-24233902 None:intergenic 30.0%
TAGTTAAATAATGAGCAGCT+TGG - Chr8:24230981-24231000 None:intergenic 30.0%
TATTGCCAGACTATCATTAA+TGG + Chr8:24231079-24231098 MsG0880043399.01.T01:intron 30.0%
TCTATTCTCAAATTTCTCAC+CGG - Chr8:24233984-24234003 None:intergenic 30.0%
TGTCTCAGCTTAAATTTGAA+AGG - Chr8:24228504-24228523 None:intergenic 30.0%
TTAAAGCAGATTCAAAACCT+TGG + Chr8:24234845-24234864 MsG0880043399.01.T01:CDS 30.0%
TTAGCCTAATCAATCCTATT+AGG - Chr8:24233551-24233570 None:intergenic 30.0%
TTATAGAAATCACTAAACGG+AGG - Chr8:24230616-24230635 None:intergenic 30.0%
TTTCACGGTTAAGTTAAATG+AGG + Chr8:24231677-24231696 MsG0880043399.01.T01:intron 30.0%
! AAAAAGTATAAGGAGGTTGA+AGG + Chr8:24232857-24232876 MsG0880043399.01.T01:intron 30.0%
! AAAGAGTAGCATCGTATTTT+TGG + Chr8:24232927-24232946 MsG0880043399.01.T01:intron 30.0%
! AAGAGAGAAAAAGTATAAGG+AGG + Chr8:24232850-24232869 MsG0880043399.01.T01:intron 30.0%
! AAGGAAAACCATCTTTCTTT+TGG + Chr8:24234886-24234905 MsG0880043399.01.T01:CDS 30.0%
! ACATGTCTATGAACCTTTTT+GGG + Chr8:24234375-24234394 MsG0880043399.01.T01:CDS 30.0%
! ATTTTCTCTCTCGTCTAAAT+AGG + Chr8:24233074-24233093 MsG0880043399.01.T01:intron 30.0%
! CAACATTTAGGATTATGCAA+TGG + Chr8:24228352-24228371 MsG0880043399.01.T01:CDS 30.0%
! GTATCTGTTTTCTCTTTTCA+CGG + Chr8:24231662-24231681 MsG0880043399.01.T01:intron 30.0%
! TACATGTCTATGAACCTTTT+TGG + Chr8:24234374-24234393 MsG0880043399.01.T01:CDS 30.0%
! TGTTCATGAAAAAAGGGTTT+TGG - Chr8:24233856-24233875 None:intergenic 30.0%
! TTCATGTTCATGTGATTTTG+TGG + Chr8:24229195-24229214 MsG0880043399.01.T01:intron 30.0%
!! ATCCTATCTGATTTTAGTGA+GGG + Chr8:24229743-24229762 MsG0880043399.01.T01:intron 30.0%
!! GGCAAAAATTGTGTTTTTAC+TGG + Chr8:24232645-24232664 MsG0880043399.01.T01:intron 30.0%
!! TATCCTATCTGATTTTAGTG+AGG + Chr8:24229742-24229761 MsG0880043399.01.T01:intron 30.0%
!!! AATGAGGTTTTTTCTTGCAA+TGG + Chr8:24231693-24231712 MsG0880043399.01.T01:intron 30.0%
!!! TTTCGTGATATTTTTTGGGA+GGG + Chr8:24234343-24234362 MsG0880043399.01.T01:CDS 30.0%
AAAAGGATCGAAGAATGAGA+TGG - Chr8:24233619-24233638 None:intergenic 35.0%
AAAATTTGTGCTAGAGGGAA+AGG + Chr8:24228402-24228421 MsG0880043399.01.T01:CDS 35.0%
AAATCACTACCGTATACATG+AGG + Chr8:24229705-24229724 MsG0880043399.01.T01:intron 35.0%
AATCGTGTGAGAGATTTAAG+AGG - Chr8:24233800-24233819 None:intergenic 35.0%
AGAATCAGATGCTTCTAATG+TGG + Chr8:24230833-24230852 MsG0880043399.01.T01:CDS 35.0%
AGGAATTCTTACGTATCAGA+AGG - Chr8:24228484-24228503 None:intergenic 35.0%
AGGCTATATATCTCCCAAAA+AGG - Chr8:24234391-24234410 None:intergenic 35.0%
AGTATTATGGACAGACGAAT+TGG + Chr8:24228884-24228903 MsG0880043399.01.T01:intron 35.0%
AGTTGTACGTTGCAATATCA+AGG + Chr8:24228628-24228647 MsG0880043399.01.T01:intron 35.0%
ATAAAAACCGGAAAACGCAA+AGG + Chr8:24231329-24231348 MsG0880043399.01.T01:intron 35.0%
ATCTTTGTGCCTTTGAATAG+TGG - Chr8:24230506-24230525 None:intergenic 35.0%
ATGTAGCATGCAAGACATAA+TGG - Chr8:24229536-24229555 None:intergenic 35.0%
ATGTGTTCTTCCAGTGTTAA+TGG + Chr8:24234058-24234077 MsG0880043399.01.T01:CDS 35.0%
ATGTTCATTACCAGATTCAG+AGG + Chr8:24230740-24230759 MsG0880043399.01.T01:intron 35.0%
CCCTGTTACAAATGACTATA+AGG + Chr8:24234219-24234238 MsG0880043399.01.T01:CDS 35.0%
CGGAACATGTTCATGAAAAA+AGG - Chr8:24233863-24233882 None:intergenic 35.0%
GACACAATGCAATATGCAAA+AGG - Chr8:24233636-24233655 None:intergenic 35.0%
GAGAACATTGAGTTTAATCC+TGG + Chr8:24234175-24234194 MsG0880043399.01.T01:CDS 35.0%
GAGAGATTTAAGAGGCAATT+TGG - Chr8:24233792-24233811 None:intergenic 35.0%
GAGTGACTGTGATGTTATTA+AGG + Chr8:24228320-24228339 MsG0880043399.01.T01:CDS 35.0%
GATGTGAAAATTTGTGCTAG+AGG + Chr8:24228396-24228415 MsG0880043399.01.T01:CDS 35.0%
GCAAAGAGATCAAGATATGA+AGG - Chr8:24228970-24228989 None:intergenic 35.0%
GGATATTATAGTCCATGTTC+TGG + Chr8:24230411-24230430 MsG0880043399.01.T01:intron 35.0%
GTCATTGGTCAAATCAGATA+TGG + Chr8:24230296-24230315 MsG0880043399.01.T01:intron 35.0%
GTTGAAGGAAAAGACACAAA+AGG + Chr8:24232872-24232891 MsG0880043399.01.T01:intron 35.0%
GTTGCAGATTGTAACTTACA+AGG + Chr8:24234867-24234886 MsG0880043399.01.T01:CDS 35.0%
GTTGTACGTTGCAATATCAA+GGG + Chr8:24228629-24228648 MsG0880043399.01.T01:intron 35.0%
TAAACTATAACTATCCGCAC+GGG - Chr8:24228930-24228949 None:intergenic 35.0%
TAAATAATGAGCAGCTTGGT+TGG - Chr8:24230977-24230996 None:intergenic 35.0%
TAAGCTGAGACAATTCACTT+TGG + Chr8:24228512-24228531 MsG0880043399.01.T01:intron 35.0%
TAAGTTACAATCTGCAACCA+AGG - Chr8:24234865-24234884 None:intergenic 35.0%
TACAAGGAGTCGTATATATG+CGG + Chr8:24229667-24229686 MsG0880043399.01.T01:intron 35.0%
TATTGATAAGCGATAGAGGA+CGG + Chr8:24228676-24228695 MsG0880043399.01.T01:intron 35.0%
TCACATGTGCTCAAAAATCA+TGG + Chr8:24233819-24233838 MsG0880043399.01.T01:CDS 35.0%
TCATTCCTCCAAAAGAAAGA+TGG - Chr8:24234897-24234916 None:intergenic 35.0%
TCCAATTTCCTCAATCCTTT+GGG - Chr8:24234824-24234843 None:intergenic 35.0%
TCCTCCTAATAGGATTGATT+AGG + Chr8:24233544-24233563 MsG0880043399.01.T01:intron 35.0%
TCTATCTTCAAATGAGGGTA+AGG - Chr8:24234563-24234582 None:intergenic 35.0%
TGACATTTCATAAAGAGGTG+TGG - Chr8:24230280-24230299 None:intergenic 35.0%
TGCAAGAAGTTCTATAGAAC+CGG - Chr8:24229814-24229833 None:intergenic 35.0%
TGCCGCAAAATATAAGAAGA+AGG + Chr8:24233718-24233737 MsG0880043399.01.T01:CDS 35.0%
TGGACTAAACTCTTTGTTCT+TGG + Chr8:24234700-24234719 MsG0880043399.01.T01:CDS 35.0%
TTGCAGAAGATTTAGCTATG+CGG + Chr8:24230763-24230782 MsG0880043399.01.T01:CDS 35.0%
TTTCCACAAAGAACACACAA+TGG - Chr8:24230244-24230263 None:intergenic 35.0%
TTTCTCTTGTTCTTAAGGGT+CGG + Chr8:24233491-24233510 MsG0880043399.01.T01:intron 35.0%
! AAGGGGTAAGACTGTATTTT+TGG + Chr8:24233431-24233450 MsG0880043399.01.T01:intron 35.0%
! ATATAAGCCTTTGCGTTTTC+CGG - Chr8:24231339-24231358 None:intergenic 35.0%
! GAAAACCATCTTTCTTTTGG+AGG + Chr8:24234889-24234908 MsG0880043399.01.T01:CDS 35.0%
! GATTTGTCTGTTTCTTGGTA+TGG + Chr8:24234442-24234461 MsG0880043399.01.T01:CDS 35.0%
! GTCATTTGACTTTAGCAATG+AGG + Chr8:24234522-24234541 MsG0880043399.01.T01:CDS 35.0%
!! AACAAAAGCATCCTCCTAAT+AGG + Chr8:24233534-24233553 MsG0880043399.01.T01:intron 35.0%
!! TCACTTTTGCACCTGTATAT+GGG + Chr8:24232146-24232165 MsG0880043399.01.T01:intron 35.0%
!! TCCTATCTGATTTTAGTGAG+GGG + Chr8:24229744-24229763 MsG0880043399.01.T01:intron 35.0%
!! TGCTCTATTTGTTGGCTTAA+GGG - Chr8:24233588-24233607 None:intergenic 35.0%
!! TTCACTTTTGCACCTGTATA+TGG + Chr8:24232145-24232164 MsG0880043399.01.T01:intron 35.0%
!! TTGCTCTATTTGTTGGCTTA+AGG - Chr8:24233589-24233608 None:intergenic 35.0%
!!! GTTTCGTGATATTTTTTGGG+AGG + Chr8:24234342-24234361 MsG0880043399.01.T01:CDS 35.0%
!!! TTCGTGATATTTTTTGGGAG+GGG + Chr8:24234344-24234363 MsG0880043399.01.T01:CDS 35.0%
AAAGGAAGTCAATGTAACGC+CGG - Chr8:24231520-24231539 None:intergenic 40.0%
AACAACCTTGAATTCCTTGG+TGG - Chr8:24234134-24234153 None:intergenic 40.0%
AAGACTGCAGAAATACAAGG+CGG - Chr8:24231048-24231067 None:intergenic 40.0%
AATGAGTCATTCGCATGAAG+AGG - Chr8:24234028-24234047 None:intergenic 40.0%
AATTAGGGCGAAAACAGACT+TGG + Chr8:24234582-24234601 MsG0880043399.01.T01:CDS 40.0%
ACAAAGAACGCCATTAACAC+TGG - Chr8:24234071-24234090 None:intergenic 40.0%
ACACCATATCTCATAACCCA+AGG - Chr8:24230437-24230456 None:intergenic 40.0%
ACCAAGACTGCAGAAATACA+AGG - Chr8:24231051-24231070 None:intergenic 40.0%
ACCCAAAGGATTGAGGAAAT+TGG + Chr8:24234820-24234839 MsG0880043399.01.T01:CDS 40.0%
ACCCCTCACTAAAATCAGAT+AGG - Chr8:24229748-24229767 None:intergenic 40.0%
ACGGGTTCTACTAACTAAAG+AGG - Chr8:24228912-24228931 None:intergenic 40.0%
ACTCATGTACAACCCAAAAC+GGG - Chr8:24232230-24232249 None:intergenic 40.0%
AGAAGATTTAGCTATGCGGA+AGG + Chr8:24230767-24230786 MsG0880043399.01.T01:CDS 40.0%
AGACCGGTTATTTGCACATA+TGG + Chr8:24234647-24234666 MsG0880043399.01.T01:CDS 40.0%
AGGAACAACCTTGAATTCCT+TGG - Chr8:24234137-24234156 None:intergenic 40.0%
ATAGCCTCAGAAGTAACTCT+TGG + Chr8:24234404-24234423 MsG0880043399.01.T01:CDS 40.0%
ATCTATAATGTCGTCGAGAC+CGG + Chr8:24234631-24234650 MsG0880043399.01.T01:CDS 40.0%
ATGAAGGGAGATTGATGTGT+TGG - Chr8:24231582-24231601 None:intergenic 40.0%
ATGTGACTGCCACTATTCAA+AGG + Chr8:24230494-24230513 MsG0880043399.01.T01:intron 40.0%
CAACAATCTCCCAACTATGT+TGG + Chr8:24230877-24230896 MsG0880043399.01.T01:intron 40.0%
CAACATAGTTGGGAGATTGT+TGG - Chr8:24230879-24230898 None:intergenic 40.0%
CAATATCAAGGGTCTCTTCA+AGG + Chr8:24228640-24228659 MsG0880043399.01.T01:intron 40.0%
CAATGTTCTCATATGGCTGA+TGG - Chr8:24234165-24234184 None:intergenic 40.0%
CACAAAGACCATATGTAGCA+GGG - Chr8:24229851-24229870 None:intergenic 40.0%
CCTTGCATTAGACAACCTAT+CGG + Chr8:24234730-24234749 MsG0880043399.01.T01:CDS 40.0%
CTAGAGGGAAAGGTAATATC+TGG + Chr8:24228412-24228431 MsG0880043399.01.T01:intron 40.0%
CTCCAATTTCCTCAATCCTT+TGG - Chr8:24234825-24234844 None:intergenic 40.0%
CTCTTTATTCTTACCCCGAT+AGG - Chr8:24234748-24234767 None:intergenic 40.0%
CTTGCATTAGACAACCTATC+GGG + Chr8:24234731-24234750 MsG0880043399.01.T01:CDS 40.0%
GAAGATTTAGCTATGCGGAA+GGG + Chr8:24230768-24230787 MsG0880043399.01.T01:CDS 40.0%
GACTCATGTACAACCCAAAA+CGG - Chr8:24232231-24232250 None:intergenic 40.0%
GATCCATTGTGTGTTCTTTG+TGG + Chr8:24230238-24230257 MsG0880043399.01.T01:intron 40.0%
GATGCAAATCAGACCCTATT+TGG - Chr8:24229258-24229277 None:intergenic 40.0%
GCCTAATCAATCCTATTAGG+AGG - Chr8:24233548-24233567 None:intergenic 40.0%
GGGTCATAACCAAATGCAAA+AGG - Chr8:24234202-24234221 None:intergenic 40.0%
GTGAGAATGTCTTTATACCC+AGG + Chr8:24228446-24228465 MsG0880043399.01.T01:intron 40.0%
GTTGTCTAATGCAAGGTACA+GGG - Chr8:24234726-24234745 None:intergenic 40.0%
GTTGTGGTGAGAGATAATGA+AGG + Chr8:24230687-24230706 MsG0880043399.01.T01:intron 40.0%
TAACCAAATGCAAAAGGACC+AGG - Chr8:24234196-24234215 None:intergenic 40.0%
TAGGATTATGCAATGGGACA+AGG + Chr8:24228359-24228378 MsG0880043399.01.T01:CDS 40.0%
TATATATGCGGTACACCCAA+AGG + Chr8:24229679-24229698 MsG0880043399.01.T01:intron 40.0%
TATCCAGCGACTTCCAAAAA+CGG - Chr8:24234312-24234331 None:intergenic 40.0%
TCACAAAGACCATATGTAGC+AGG - Chr8:24229852-24229871 None:intergenic 40.0%
TGCATAATATATGCGGTCTG+AGG + Chr8:24229896-24229915 MsG0880043399.01.T01:intron 40.0%
TTCTCTTGTTCTTAAGGGTC+GGG + Chr8:24233492-24233511 MsG0880043399.01.T01:intron 40.0%
TTGAAACATGCAGATCTCAC+TGG - Chr8:24231993-24232012 None:intergenic 40.0%
TTGCATTAGACAACCTATCG+GGG + Chr8:24234732-24234751 MsG0880043399.01.T01:CDS 40.0%
TTGGGTACGTAAATCAATCC+AGG - Chr8:24234806-24234825 None:intergenic 40.0%
TTGTATTCTGACCTAGCTGA+GGG - Chr8:24230057-24230076 None:intergenic 40.0%
TTTACGTACCCAAAGGATTG+AGG + Chr8:24234813-24234832 MsG0880043399.01.T01:CDS 40.0%
TTTAGTTAGTAGAACCCGTG+CGG + Chr8:24228913-24228932 MsG0880043399.01.T01:intron 40.0%
TTTGTATTCTGACCTAGCTG+AGG - Chr8:24230058-24230077 None:intergenic 40.0%
! AAAAGATCCTATTGGCTGAG+AGG - Chr8:24232570-24232589 None:intergenic 40.0%
! AAAGATCCTATTGGCTGAGA+GGG - Chr8:24232569-24232588 None:intergenic 40.0%
! AAGTTCGCGCTTCTCATTTT+TGG - Chr8:24230034-24230053 None:intergenic 40.0%
! AATCCTGGTCCTTTTGCATT+TGG + Chr8:24234190-24234209 MsG0880043399.01.T01:CDS 40.0%
! AATGTTGTTTGCCTACACTC+TGG + Chr8:24232013-24232032 MsG0880043399.01.T01:intron 40.0%
! ACGGTAGTGATTTTCACCTT+TGG - Chr8:24229698-24229717 None:intergenic 40.0%
! AGAGTGTTAGTACGTGTTGA+TGG + Chr8:24230541-24230560 MsG0880043399.01.T01:intron 40.0%
! CGGTAGTGATTTTCACCTTT+GGG - Chr8:24229697-24229716 None:intergenic 40.0%
! GAATGAATTGTGTCATTGGC+TGG + Chr8:24234483-24234502 MsG0880043399.01.T01:CDS 40.0%
! GCATGGATTTGTCTGTTTCT+TGG + Chr8:24234437-24234456 MsG0880043399.01.T01:CDS 40.0%
! GGATTGATTTACGTACCCAA+AGG + Chr8:24234806-24234825 MsG0880043399.01.T01:CDS 40.0%
!! AGAAGGCATCAAAGATAACC+TGG - Chr8:24228467-24228486 None:intergenic 40.0%
!! ATAAGTGGGTATTGGTGTTG+TGG + Chr8:24230671-24230690 MsG0880043399.01.T01:intron 40.0%
!! ATATGGATTTTGGGTGAGCT+TGG + Chr8:24234664-24234683 MsG0880043399.01.T01:CDS 40.0%
!! ATGGTTTGCTTCCTCCTTAA+GGG + Chr8:24230315-24230334 MsG0880043399.01.T01:intron 40.0%
!! ATTAGGTTGTATCCCCGTTT+TGG + Chr8:24232214-24232233 MsG0880043399.01.T01:intron 40.0%
!! GAAGGCATCAAAGATAACCT+GGG - Chr8:24228466-24228485 None:intergenic 40.0%
!! GATAATGAAGGTGTTGTCGT+TGG + Chr8:24230699-24230718 MsG0880043399.01.T01:intron 40.0%
!! GCTCTATTTGTTGGCTTAAG+GGG - Chr8:24233587-24233606 None:intergenic 40.0%
!! TATGGTTTGCTTCCTCCTTA+AGG + Chr8:24230314-24230333 MsG0880043399.01.T01:intron 40.0%
!! TCGGTTCTAGAAGTGAAATG+AGG + Chr8:24229576-24229595 MsG0880043399.01.T01:intron 40.0%
!! TTAGGTTGTATCCCCGTTTT+GGG + Chr8:24232215-24232234 MsG0880043399.01.T01:intron 40.0%
!! TTGTCGTTGGTGTTAGTTGT+TGG + Chr8:24230712-24230731 MsG0880043399.01.T01:intron 40.0%
!!! TGATTTTAGTGAGGGGTACT+GGG + Chr8:24229751-24229770 MsG0880043399.01.T01:intron 40.0%
!!! TTTTGGGTTGTACATGAGTC+AGG + Chr8:24232231-24232250 MsG0880043399.01.T01:intron 40.0%
AAGAAGATGACGAGATAGCC+TGG + Chr8:24234785-24234804 MsG0880043399.01.T01:CDS 45.0%
AAGCTTAATGTTGACGCAGC+AGG + Chr8:24230634-24230653 MsG0880043399.01.T01:CDS 45.0%
ACATGTTCCTGCGAATATGG+AGG + Chr8:24229552-24229571 MsG0880043399.01.T01:intron 45.0%
ACCCACTTATCACCCTCTAT+CGG - Chr8:24230661-24230680 None:intergenic 45.0%
AGAGGGTGATAAGTGGGTAT+TGG + Chr8:24230663-24230682 MsG0880043399.01.T01:intron 45.0%
AGCTTGAAGAACCAGAGTGT+AGG - Chr8:24232027-24232046 None:intergenic 45.0%
ATCAAATACCGCCCTTAAGG+AGG - Chr8:24230329-24230348 None:intergenic 45.0%
ATTATGCAATGGGACAAGGC+TGG + Chr8:24228363-24228382 MsG0880043399.01.T01:CDS 45.0%
CAAAAACGGTGGTCTTTCTC+AGG - Chr8:24234298-24234317 None:intergenic 45.0%
CAACCAGTGAACCCATATAC+AGG - Chr8:24232160-24232179 None:intergenic 45.0%
CAAGGGTCTCTTCAAGGAAA+GGG + Chr8:24228646-24228665 MsG0880043399.01.T01:intron 45.0%
CCGATAGGTTGTCTAATGCA+AGG - Chr8:24234733-24234752 None:intergenic 45.0%
CGAATCAAATACCGCCCTTA+AGG - Chr8:24230332-24230351 None:intergenic 45.0%
CGGGTCAGTTGCTAGTTATA+TGG - Chr8:24231385-24231404 None:intergenic 45.0%
CTCATGTACAACCCAAAACG+GGG - Chr8:24232229-24232248 None:intergenic 45.0%
CTCTTGGAGGAAACTTAGCA+TGG + Chr8:24234420-24234439 MsG0880043399.01.T01:CDS 45.0%
CTTTGTGAGCTTAGCTCAGT+TGG + Chr8:24229864-24229883 MsG0880043399.01.T01:intron 45.0%
GAGCAAAATCTTACATCGGC+AGG - Chr8:24229299-24229318 None:intergenic 45.0%
GCTACATGTTCCTGCGAATA+TGG + Chr8:24229549-24229568 MsG0880043399.01.T01:intron 45.0%
GGTTGTCTAATGCAAGGTAC+AGG - Chr8:24234727-24234746 None:intergenic 45.0%
TATAGTCCATGTTCTGGCCT+TGG + Chr8:24230417-24230436 MsG0880043399.01.T01:intron 45.0%
TATTTCCCCTCTCAGCCAAT+AGG + Chr8:24232560-24232579 MsG0880043399.01.T01:intron 45.0%
TCAAGGGTCTCTTCAAGGAA+AGG + Chr8:24228645-24228664 MsG0880043399.01.T01:intron 45.0%
TCATTCGCATGAAGAGGTGA+TGG - Chr8:24234022-24234041 None:intergenic 45.0%
TCCGATAGAGGGTGATAAGT+GGG + Chr8:24230657-24230676 MsG0880043399.01.T01:intron 45.0%
TCCTCCAAGAGTTACTTCTG+AGG - Chr8:24234411-24234430 None:intergenic 45.0%
TCTTCTGCAACCTCTGAATC+TGG - Chr8:24230753-24230772 None:intergenic 45.0%
TTGATGGAGACACTAAGTGG+AGG + Chr8:24230557-24230576 MsG0880043399.01.T01:CDS 45.0%
TTGGCTGGTAAATGTGGACA+TGG + Chr8:24234498-24234517 MsG0880043399.01.T01:CDS 45.0%
TTGTGTCCTCCTAAAGCAAG+TGG + Chr8:24233928-24233947 MsG0880043399.01.T01:CDS 45.0%
TTTAGCTATGCGGAAGGGTT+TGG + Chr8:24230773-24230792 MsG0880043399.01.T01:CDS 45.0%
! AAGATCCTATTGGCTGAGAG+GGG - Chr8:24232568-24232587 None:intergenic 45.0%
! ATAGTCCATGTTCTGGCCTT+GGG + Chr8:24230418-24230437 MsG0880043399.01.T01:intron 45.0%
! CTGAGAAAGACCACCGTTTT+TGG + Chr8:24234296-24234315 MsG0880043399.01.T01:CDS 45.0%
! GCCTTGTATTTCTGCAGTCT+TGG + Chr8:24231047-24231066 MsG0880043399.01.T01:intron 45.0%
! GGACAAGGCTGGTTATAACA+AGG + Chr8:24228374-24228393 MsG0880043399.01.T01:CDS 45.0%
! GTCTGATTTGCATCTTGCAC+TGG + Chr8:24229264-24229283 MsG0880043399.01.T01:intron 45.0%
! GTGTCATTGGCTGGTAAATG+TGG + Chr8:24234492-24234511 MsG0880043399.01.T01:CDS 45.0%
! GTGTTGATGGAGACACTAAG+TGG + Chr8:24230554-24230573 MsG0880043399.01.T01:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG + Chr8:24229869-24229888 MsG0880043399.01.T01:intron 45.0%
! TGGCCTTGGGTTATGAGATA+TGG + Chr8:24230431-24230450 MsG0880043399.01.T01:intron 45.0%
!! AGCTTGGTGTGAAGGTATCA+TGG + Chr8:24234680-24234699 MsG0880043399.01.T01:CDS 45.0%
!! CTATTTGTTGGCTTAAGGGG+CGG - Chr8:24233584-24233603 None:intergenic 45.0%
!! CTGATTTTAGTGAGGGGTAC+TGG + Chr8:24229750-24229769 MsG0880043399.01.T01:intron 45.0%
!!! TTTTTGAGGCCCATACCCTA+GGG + Chr8:24229784-24229803 MsG0880043399.01.T01:intron 45.0%
!!! TTTTTTGAGGCCCATACCCT+AGG + Chr8:24229783-24229802 MsG0880043399.01.T01:intron 45.0%
!! AAATATATATACAAAATAAA+AGG - Chr8:24228855-24228874 None:intergenic 5.0%
AAGACCATATGTAGCAGGGC+CGG - Chr8:24229847-24229866 None:intergenic 50.0%
CATAACCCAAGGCCAGAACA+TGG - Chr8:24230426-24230445 None:intergenic 50.0%
CCAACGTCTGTGTTCTCACA+TGG + Chr8:24228603-24228622 MsG0880043399.01.T01:intron 50.0%
CCATGTGAGAACACAGACGT+TGG - Chr8:24228606-24228625 None:intergenic 50.0%
CTTGTTCTTAAGGGTCGGGT+TGG + Chr8:24233496-24233515 MsG0880043399.01.T01:intron 50.0%
GCACCTGTATATGGGTTCAC+TGG + Chr8:24232154-24232173 MsG0880043399.01.T01:intron 50.0%
GCCTCAGAAGTAACTCTTGG+AGG + Chr8:24234407-24234426 MsG0880043399.01.T01:CDS 50.0%
GGCGTTCTTTGTCTCTCTTG+TGG + Chr8:24234079-24234098 MsG0880043399.01.T01:CDS 50.0%
GTCCGATAGAGGGTGATAAG+TGG + Chr8:24230656-24230675 MsG0880043399.01.T01:intron 50.0%
GTGAGAACACAGACGTTGGT+AGG - Chr8:24228602-24228621 None:intergenic 50.0%
GTTTGCTTCCTCCTTAAGGG+CGG + Chr8:24230318-24230337 MsG0880043399.01.T01:intron 50.0%
TAGAACTTCTTGCACCCCCT+AGG + Chr8:24229820-24229839 MsG0880043399.01.T01:intron 50.0%
TAGGGCGAAAACAGACTTGG+CGG + Chr8:24234585-24234604 MsG0880043399.01.T01:CDS 50.0%
TATAGAACCGGACCTCCCTA+GGG - Chr8:24229802-24229821 None:intergenic 50.0%
TCATATGGCTGATGGCTACG+AGG - Chr8:24234157-24234176 None:intergenic 50.0%
TCCACAGTGCAATGGTTACG+TGG - Chr8:24234105-24234124 None:intergenic 50.0%
TCCAGCCACCAAGGAATTCA+AGG + Chr8:24234126-24234145 MsG0880043399.01.T01:CDS 50.0%
TTCCTGCGAATATGGAGGCT+CGG + Chr8:24229557-24229576 MsG0880043399.01.T01:intron 50.0%
! ACCTTGAATTCCTTGGTGGC+TGG - Chr8:24234130-24234149 None:intergenic 50.0%
! GGTTGCTTGCCACTTGCTTT+AGG - Chr8:24233940-24233959 None:intergenic 50.0%
! TGCTTGCCACTTGCTTTAGG+AGG - Chr8:24233937-24233956 None:intergenic 50.0%
!! ACAGACTTGGCGGTGTTACA+TGG + Chr8:24234595-24234614 MsG0880043399.01.T01:CDS 50.0%
!! TTTGGGTGAGCTTGGTGTGA+AGG + Chr8:24234672-24234691 MsG0880043399.01.T01:CDS 50.0%
AACCGAGCCTCCATATTCGC+AGG - Chr8:24229562-24229581 None:intergenic 55.0%
AACTGACCCGTGCTAAGCAC+GGG + Chr8:24231395-24231414 MsG0880043399.01.T01:intron 55.0%
ACAGCGTGTACAGTGAGGTG+TGG - Chr8:24233961-24233980 None:intergenic 55.0%
ACCTCACTGTACACGCTGTC+CGG + Chr8:24233962-24233981 MsG0880043399.01.T01:CDS 55.0%
ACTGTGGAATCCAGCCACCA+AGG + Chr8:24234117-24234136 MsG0880043399.01.T01:CDS 55.0%
CAACTGACCCGTGCTAAGCA+CGG + Chr8:24231394-24231413 MsG0880043399.01.T01:intron 55.0%
CCAGCGACTTCCAAAAACGG+TGG - Chr8:24234309-24234328 None:intergenic 55.0%
CTATAGAACCGGACCTCCCT+AGG - Chr8:24229803-24229822 None:intergenic 55.0%
CTGCTTCGAATTAGCCCGTG+CGG - Chr8:24231429-24231448 None:intergenic 55.0%
GCCACGTAACCATTGCACTG+TGG + Chr8:24234101-24234120 MsG0880043399.01.T01:CDS 55.0%
GGCTGGATTCCACAGTGCAA+TGG - Chr8:24234113-24234132 None:intergenic 55.0%
! ACGGGCTAATTCGAAGCAGG+GGG + Chr8:24231430-24231449 MsG0880043399.01.T01:intron 55.0%
! CACGGGCTAATTCGAAGCAG+GGG + Chr8:24231429-24231448 MsG0880043399.01.T01:intron 55.0%
! GCACGGGCTAATTCGAAGCA+GGG + Chr8:24231428-24231447 MsG0880043399.01.T01:intron 55.0%
! GCGGTCTGAGGTTCGAATCT+CGG + Chr8:24229908-24229927 MsG0880043399.01.T01:intron 55.0%
!! CCACCGTTTTTGGAAGTCGC+TGG + Chr8:24234306-24234325 MsG0880043399.01.T01:CDS 55.0%
!! GGCGGTGTTACATGGATCTG+TGG + Chr8:24234603-24234622 MsG0880043399.01.T01:CDS 55.0%
AACCGGACCTCCCTAGGGTA+TGG - Chr8:24229797-24229816 None:intergenic 60.0%
AATTAGCCCGTGCGGAGCAC+GGG - Chr8:24231421-24231440 None:intergenic 60.0%
ACCGGACAGCGTGTACAGTG+AGG - Chr8:24233966-24233985 None:intergenic 60.0%
ACCGGACCTCCCTAGGGTAT+GGG - Chr8:24229796-24229815 None:intergenic 60.0%
AGCGCGAACTTCCCTCAGCT+AGG + Chr8:24230043-24230062 MsG0880043399.01.T01:intron 60.0%
AGGTCCGGCCCTGCTACATA+TGG + Chr8:24229840-24229859 MsG0880043399.01.T01:intron 60.0%
ATGTAGCAGGGCCGGACCTA+GGG - Chr8:24229839-24229858 None:intergenic 60.0%
CTTCTTGCACCCCCTAGGTC+CGG + Chr8:24229825-24229844 MsG0880043399.01.T01:intron 60.0%
GAATTAGCCCGTGCGGAGCA+CGG - Chr8:24231422-24231441 None:intergenic 60.0%
GACGCAGCAGGTCCGATAGA+GGG + Chr8:24230646-24230665 MsG0880043399.01.T01:CDS 60.0%
TATGTAGCAGGGCCGGACCT+AGG - Chr8:24229840-24229859 None:intergenic 60.0%
TGACGCAGCAGGTCCGATAG+AGG + Chr8:24230645-24230664 MsG0880043399.01.T01:CDS 60.0%
TTGAGGCCCATACCCTAGGG+AGG + Chr8:24229787-24229806 MsG0880043399.01.T01:intron 60.0%
! CGCACGGGCTAATTCGAAGC+AGG + Chr8:24231427-24231446 MsG0880043399.01.T01:intron 60.0%
GCCCATACCCTAGGGAGGTC+CGG + Chr8:24229792-24229811 MsG0880043399.01.T01:intron 65.0%
TGTAGCAGGGCCGGACCTAG+GGG - Chr8:24229838-24229857 None:intergenic 65.0%
CACGGGCCCGTGCTTAGCAC+GGG - Chr8:24231404-24231423 None:intergenic 70.0%
GCACGGGCCCGTGCTTAGCA+CGG - Chr8:24231405-24231424 None:intergenic 70.0%
GTAGCAGGGCCGGACCTAGG+GGG - Chr8:24229837-24229856 None:intergenic 70.0%
! CACGGGCCCGTGCTCCGCAC+GGG + Chr8:24231412-24231431 MsG0880043399.01.T01:intron 80.0%
! GCACGGGCCCGTGCTCCGCA+CGG + Chr8:24231411-24231430 MsG0880043399.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 24228318 24234924 24228318 ID=MsG0880043399.01;Name=MsG0880043399.01
Chr8 mRNA 24228318 24234924 24228318 ID=MsG0880043399.01.T01;Parent=MsG0880043399.01;Name=MsG0880043399.01.T01;_AED=0.39;_eAED=0.43;_QI=0|0|0|1|0.66|1|4|0|523
Chr8 exon 24228318 24228423 24228318 ID=MsG0880043399.01.T01:exon:8901;Parent=MsG0880043399.01.T01
Chr8 exon 24230551 24230667 24230551 ID=MsG0880043399.01.T01:exon:8902;Parent=MsG0880043399.01.T01
Chr8 exon 24230754 24230854 24230754 ID=MsG0880043399.01.T01:exon:8903;Parent=MsG0880043399.01.T01
Chr8 exon 24233677 24234924 24233677 ID=MsG0880043399.01.T01:exon:8904;Parent=MsG0880043399.01.T01
Chr8 CDS 24228318 24228423 24228318 ID=MsG0880043399.01.T01:cds;Parent=MsG0880043399.01.T01
Chr8 CDS 24230551 24230667 24230551 ID=MsG0880043399.01.T01:cds;Parent=MsG0880043399.01.T01
Chr8 CDS 24230754 24230854 24230754 ID=MsG0880043399.01.T01:cds;Parent=MsG0880043399.01.T01
Chr8 CDS 24233677 24234924 24233677 ID=MsG0880043399.01.T01:cds;Parent=MsG0880043399.01.T01
Gene Sequence

>MsG0880043399.01.T01

ATGAGTGACTGTGATGTTATTAAGGAATATAGATCAACATTTAGGATTATGCAATGGGACAAGGCTGGTTATAACAAGGATGTGAAAATTTGTGCTAGAGGGAAAGTACGTGTTGATGGAGACACTAAGTGGAGGTCCATTTTGTCAATATCTATTGTTCATTGGACACCTCCGTTTAGTGATTTCTATAAGCTTAATGTTGACGCAGCAGGTCCGATAGAGGATTCAGAGGTTGCAGAAGATTTAGCTATGCGGAAGGGTTTGGAATTTGCAAAAGACATGTCTTTTCTGAATCTTATAGCAGAATCAGATGCTTCTAATGTGTTTCACTTTCTTCTATACAAATTTCAATTCATGGCGGCTTCTGCCGCAAAATATAAGAAGAAGGTTAGTACTTCTTCTCACATACATGATGATATTGCTTTCTCTATTCTCTCCAAATTGCCTCTTAAATCTCTCACACGATTCACATGTGCTCAAAAATCATGGTCTCTTCTTTTCCAAAACCCTTTTTTCATGAACATGTTCCGCACCAATATCTTACTATCTAAAAATGATGAGGACGACGAAAACACTTGTGTCCTCCTAAAGCAAGTGGCAAGCAACCACACCTCACTGTACACGCTGTCCGGTGAGAAATTTGAGAATAGAGTCAGATTAGACTTTCCATCACCTCTTCATGCGAATGACTCATTGATTTATATTATGTGTTCTTCCAGTGTTAATGGCGTTCTTTGTCTCTCTTGTGGCCACGTAACCATTGCACTGTGGAATCCAGCCACCAAGGAATTCAAGGTTGTTCCTCGTAGCCATCAGCCATATGAGAACATTGAGTTTAATCCTGGTCCTTTTGCATTTGGTTATGACCCTGTTACAAATGACTATAAGGTGATTAGGATTGCTCAATATCCCATATACTTTGAAGATAATTGGATTGTGATACCTGAGAAAGACCACCGTTTTTGGAAGTCGCTGGATAGCCCTTATATGTTTCGTGATATTTTTTGGGAGGGGCATTCACTACATGTCTATGAACCTTTTTGGGAGATATATAGCCTCAGAAGTAACTCTTGGAGGAAACTTAGCATGGATTTGTCTGTTTCTTGGTATGGTTTTTGTAAGATGAACTTGAATGAATTGTGTCATTGGCTGGTAAATGTGGACATGGTGTCATTTGACTTTAGCAATGAGGTATTCTTTGCAACAACCTTACCCTCATTTGAAGATAGAATTAGGGCGAAAACAGACTTGGCGGTGTTACATGGATCTGTGGCTTTCATCTATAATGTCGTCGAGACCGGTTATTTGCACATATGGATTTTGGGTGAGCTTGGTGTGAAGGTATCATGGACTAAACTCTTTGTTCTTGGCCCTGTACCTTGCATTAGACAACCTATCGGGGTAAGAATAAAGAGCGTTATGTTCTACGTAAAAGAAGATGACGAGATAGCCTGGATTGATTTACGTACCCAAAGGATTGAGGAAATTGGAGTTAAAGCAGATTCAAAACCTTGGTTGCAGATTGTAACTTACAAGGAAAACCATCTTTCTTTTGGAGGAATGAATAGTTAA
Protein sequence

>MsG0880043399.01.T01

MSDCDVIKEYRSTFRIMQWDKAGYNKDVKICARGKVRVDGDTKWRSILSISIVHWTPPFSDFYKLNVDAAGPIEDSEVAEDLAMRKGLEFAKDMSFLNLIAESDASNVFHFLLYKFQFMAASAAKYKKKVSTSSHIHDDIAFSILSKLPLKSLTRFTCAQKSWSLLFQNPFFMNMFRTNILLSKNDEDDENTCVLLKQVASNHTSLYTLSGEKFENRVRLDFPSPLHANDSLIYIMCSSSVNGVLCLSCGHVTIALWNPATKEFKVVPRSHQPYENIEFNPGPFAFGYDPVTNDYKVIRIAQYPIYFEDNWIVIPEKDHRFWKSLDSPYMFRDIFWEGHSLHVYEPFWEIYSLRSNSWRKLSMDLSVSWYGFCKMNLNELCHWLVNVDMVSFDFSNEVFFATTLPSFEDRIRAKTDLAVLHGSVAFIYNVVETGYLHIWILGELGVKVSWTKLFVLGPVPCIRQPIGVRIKSVMFYVKEDDEIAWIDLRTQRIEEIGVKADSKPWLQIVTYKENHLSFGGMNS*