Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030215.01.T01 | GAU43401.1 | 60.807 | 347 | 127 | 6 | 1 | 339 | 1 | 346 | 1.83E-133 | 397 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030215.01.T01 | A0A2Z6NHT3 | 60.807 | 347 | 127 | 6 | 1 | 339 | 1 | 346 | 8.72e-134 | 397 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030215.01.T01 | MTR_5g096630 | 49.706 | 340 | 152 | 7 | 1 | 338 | 1 | 323 | 8.09e-97 | 293 |
MsG0580030215.01.T01 | MTR_4g102410 | 48.387 | 341 | 156 | 9 | 1 | 338 | 44 | 367 | 1.84e-92 | 283 |
MsG0580030215.01.T01 | MTR_0129s0070 | 48.773 | 326 | 132 | 11 | 23 | 339 | 16 | 315 | 9.08e-84 | 259 |
MsG0580030215.01.T01 | MTR_0129s0120 | 47.256 | 328 | 138 | 11 | 23 | 341 | 16 | 317 | 4.45e-81 | 252 |
MsG0580030215.01.T01 | MTR_2g021950 | 45.245 | 347 | 151 | 11 | 1 | 338 | 1 | 317 | 2.40e-80 | 250 |
MsG0580030215.01.T01 | MTR_5g097330 | 48.910 | 321 | 144 | 9 | 23 | 338 | 15 | 320 | 3.19e-80 | 250 |
MsG0580030215.01.T01 | MTR_2g021800 | 44.910 | 334 | 156 | 10 | 23 | 339 | 15 | 337 | 1.47e-79 | 249 |
MsG0580030215.01.T01 | MTR_2g022000 | 45.210 | 334 | 154 | 9 | 23 | 339 | 15 | 336 | 1.34e-78 | 247 |
MsG0580030215.01.T01 | MTR_4g055820 | 45.122 | 328 | 149 | 8 | 23 | 338 | 13 | 321 | 3.25e-77 | 241 |
MsG0580030215.01.T01 | MTR_7g069550 | 46.828 | 331 | 134 | 13 | 24 | 338 | 14 | 318 | 1.62e-76 | 241 |
MsG0580030215.01.T01 | MTR_2g021770 | 43.860 | 342 | 161 | 11 | 11 | 338 | 1 | 325 | 8.99e-76 | 239 |
MsG0580030215.01.T01 | MTR_2g038680 | 45.349 | 344 | 138 | 13 | 18 | 337 | 10 | 327 | 3.03e-75 | 238 |
MsG0580030215.01.T01 | MTR_8g063440 | 46.729 | 321 | 136 | 13 | 23 | 338 | 11 | 301 | 5.28e-75 | 236 |
MsG0580030215.01.T01 | MTR_0129s0050 | 46.313 | 339 | 137 | 14 | 23 | 339 | 13 | 328 | 1.91e-73 | 233 |
MsG0580030215.01.T01 | MTR_1g007410 | 43.402 | 341 | 157 | 7 | 1 | 333 | 7 | 319 | 1.25e-72 | 231 |
MsG0580030215.01.T01 | MTR_4g117550 | 46.259 | 294 | 136 | 8 | 23 | 313 | 16 | 290 | 1.24e-71 | 227 |
MsG0580030215.01.T01 | MTR_1g053510 | 42.817 | 355 | 149 | 12 | 5 | 337 | 1 | 323 | 1.56e-68 | 220 |
MsG0580030215.01.T01 | MTR_8g012090 | 43.391 | 348 | 122 | 13 | 1 | 338 | 1 | 283 | 5.91e-68 | 216 |
MsG0580030215.01.T01 | MTR_1g007450 | 44.343 | 327 | 160 | 8 | 17 | 339 | 7 | 315 | 4.65e-67 | 217 |
MsG0580030215.01.T01 | MTR_5g072060 | 45.152 | 330 | 123 | 11 | 23 | 338 | 5 | 290 | 7.06e-67 | 221 |
MsG0580030215.01.T01 | MTR_2g104340 | 40.870 | 345 | 161 | 10 | 7 | 338 | 1 | 315 | 1.48e-65 | 212 |
MsG0580030215.01.T01 | MTR_5g091140 | 40.462 | 346 | 161 | 11 | 1 | 339 | 27 | 334 | 2.33e-65 | 213 |
MsG0580030215.01.T01 | MTR_8g041270 | 41.292 | 356 | 156 | 13 | 5 | 338 | 1 | 325 | 3.44e-65 | 212 |
MsG0580030215.01.T01 | MTR_6g461660 | 43.807 | 331 | 150 | 13 | 19 | 338 | 14 | 319 | 8.12e-65 | 211 |
MsG0580030215.01.T01 | MTR_1g007430 | 42.444 | 311 | 139 | 7 | 35 | 338 | 7 | 284 | 3.57e-64 | 206 |
MsG0580030215.01.T01 | MTR_6g086825 | 41.463 | 328 | 162 | 9 | 23 | 338 | 69 | 378 | 5.86e-63 | 207 |
MsG0580030215.01.T01 | MTR_7g017130 | 42.151 | 344 | 166 | 14 | 1 | 339 | 1 | 316 | 1.19e-62 | 205 |
MsG0580030215.01.T01 | MTR_7g017170 | 42.151 | 344 | 166 | 14 | 1 | 339 | 1 | 316 | 1.29e-62 | 205 |
MsG0580030215.01.T01 | MTR_8g013000 | 43.844 | 333 | 151 | 12 | 17 | 338 | 5 | 312 | 1.93e-62 | 204 |
MsG0580030215.01.T01 | MTR_2g104280 | 41.108 | 343 | 158 | 13 | 15 | 338 | 7 | 324 | 3.36e-62 | 204 |
MsG0580030215.01.T01 | MTR_5g097350 | 40.705 | 312 | 150 | 11 | 33 | 338 | 25 | 307 | 8.60e-62 | 202 |
MsG0580030215.01.T01 | MTR_4g028510 | 41.040 | 346 | 160 | 13 | 11 | 338 | 1 | 320 | 2.85e-61 | 203 |
MsG0580030215.01.T01 | MTR_4g014370 | 40.230 | 348 | 164 | 12 | 14 | 338 | 1 | 327 | 3.17e-61 | 201 |
MsG0580030215.01.T01 | MTR_0054s0100 | 40.828 | 338 | 163 | 12 | 17 | 339 | 12 | 327 | 7.57e-61 | 200 |
MsG0580030215.01.T01 | MTR_0054s0090 | 41.265 | 332 | 158 | 11 | 23 | 339 | 16 | 325 | 1.06e-60 | 200 |
MsG0580030215.01.T01 | MTR_2g064950 | 42.183 | 339 | 141 | 15 | 17 | 337 | 5 | 306 | 7.01e-60 | 197 |
MsG0580030215.01.T01 | MTR_6g079770 | 39.888 | 356 | 170 | 13 | 10 | 342 | 5 | 339 | 3.96e-59 | 196 |
MsG0580030215.01.T01 | MTR_5g097220 | 40.884 | 362 | 152 | 17 | 1 | 338 | 1 | 324 | 5.89e-59 | 196 |
MsG0580030215.01.T01 | MTR_0831s0010 | 40.909 | 330 | 152 | 13 | 17 | 337 | 43 | 338 | 1.70e-58 | 194 |
MsG0580030215.01.T01 | MTR_8g046310 | 39.181 | 342 | 151 | 13 | 5 | 337 | 1 | 294 | 2.80e-58 | 193 |
MsG0580030215.01.T01 | MTR_5g097680 | 39.237 | 367 | 175 | 12 | 1 | 338 | 1 | 348 | 4.83e-58 | 194 |
MsG0580030215.01.T01 | MTR_5g024260 | 39.458 | 332 | 171 | 10 | 14 | 342 | 12 | 316 | 1.63e-57 | 192 |
MsG0580030215.01.T01 | MTR_3g011120 | 38.438 | 333 | 169 | 11 | 7 | 338 | 1 | 298 | 3.85e-57 | 190 |
MsG0580030215.01.T01 | MTR_8g033140 | 37.534 | 365 | 165 | 13 | 5 | 337 | 1 | 334 | 9.22e-57 | 190 |
MsG0580030215.01.T01 | MTR_4g028680 | 39.359 | 343 | 168 | 11 | 11 | 338 | 1 | 318 | 9.27e-57 | 189 |
MsG0580030215.01.T01 | MTR_6g090180 | 40.785 | 331 | 161 | 10 | 23 | 338 | 46 | 356 | 1.04e-56 | 190 |
MsG0580030215.01.T01 | MTR_7g111700 | 38.953 | 344 | 146 | 7 | 1 | 339 | 1 | 285 | 2.15e-56 | 187 |
MsG0580030215.01.T01 | MTR_4g130330 | 38.372 | 344 | 153 | 12 | 18 | 338 | 1 | 308 | 2.78e-56 | 188 |
MsG0580030215.01.T01 | MTR_5g037680 | 40.964 | 332 | 150 | 11 | 19 | 338 | 3 | 300 | 4.48e-56 | 189 |
MsG0580030215.01.T01 | MTR_8g033110 | 40.057 | 352 | 154 | 13 | 17 | 337 | 7 | 332 | 8.67e-56 | 187 |
MsG0580030215.01.T01 | MTR_0134s0060 | 40.000 | 345 | 163 | 11 | 17 | 338 | 7 | 330 | 1.20e-55 | 187 |
MsG0580030215.01.T01 | MTR_8g464770 | 41.195 | 318 | 153 | 14 | 23 | 337 | 11 | 297 | 1.53e-55 | 186 |
MsG0580030215.01.T01 | MTR_6g080680 | 38.483 | 356 | 158 | 13 | 1 | 338 | 1 | 313 | 2.80e-55 | 186 |
MsG0580030215.01.T01 | MTR_8g046200 | 39.353 | 371 | 139 | 17 | 15 | 337 | 6 | 338 | 3.99e-55 | 186 |
MsG0580030215.01.T01 | MTR_7g017040 | 42.470 | 332 | 153 | 12 | 17 | 337 | 11 | 315 | 4.40e-55 | 185 |
MsG0580030215.01.T01 | MTR_4g028660 | 38.484 | 343 | 170 | 13 | 11 | 338 | 1 | 317 | 1.66e-54 | 184 |
MsG0580030215.01.T01 | MTR_4g027450 | 38.484 | 343 | 170 | 13 | 11 | 338 | 1 | 317 | 1.66e-54 | 184 |
MsG0580030215.01.T01 | MTR_7g079640 | 39.571 | 326 | 149 | 12 | 17 | 337 | 9 | 291 | 5.82e-54 | 182 |
MsG0580030215.01.T01 | MTR_8g063330 | 37.920 | 327 | 174 | 11 | 17 | 337 | 7 | 310 | 6.94e-53 | 181 |
MsG0580030215.01.T01 | MTR_5g098950 | 53.297 | 182 | 49 | 4 | 158 | 339 | 90 | 235 | 7.31e-53 | 176 |
MsG0580030215.01.T01 | MTR_8g467670 | 37.346 | 324 | 158 | 13 | 23 | 339 | 13 | 298 | 9.19e-53 | 179 |
MsG0580030215.01.T01 | MTR_6g079810 | 39.167 | 360 | 167 | 14 | 1 | 339 | 54 | 382 | 1.31e-52 | 180 |
MsG0580030215.01.T01 | MTR_7g016930 | 39.252 | 321 | 152 | 8 | 23 | 341 | 15 | 294 | 1.40e-52 | 177 |
MsG0580030215.01.T01 | MTR_2g034700 | 40.308 | 325 | 140 | 13 | 23 | 338 | 13 | 292 | 1.68e-52 | 177 |
MsG0580030215.01.T01 | MTR_5g074800 | 42.215 | 289 | 128 | 10 | 63 | 338 | 1 | 263 | 1.11e-51 | 174 |
MsG0580030215.01.T01 | MTR_2g066170 | 37.812 | 320 | 167 | 11 | 23 | 338 | 11 | 302 | 1.94e-51 | 175 |
MsG0580030215.01.T01 | MTR_8g032980 | 38.082 | 365 | 151 | 15 | 15 | 337 | 7 | 338 | 2.53e-51 | 176 |
MsG0580030215.01.T01 | MTR_2g066200 | 38.154 | 325 | 163 | 13 | 23 | 339 | 11 | 305 | 2.54e-51 | 175 |
MsG0580030215.01.T01 | MTR_8g039500 | 37.188 | 320 | 160 | 11 | 23 | 338 | 11 | 293 | 3.46e-51 | 173 |
MsG0580030215.01.T01 | MTR_5g092850 | 37.982 | 337 | 154 | 13 | 23 | 338 | 15 | 317 | 1.11e-50 | 174 |
MsG0580030215.01.T01 | MTR_7g104710 | 38.182 | 330 | 142 | 9 | 23 | 342 | 16 | 293 | 2.05e-50 | 171 |
MsG0580030215.01.T01 | MTR_5g069390 | 37.190 | 363 | 177 | 18 | 1 | 339 | 1 | 336 | 3.08e-50 | 175 |
MsG0580030215.01.T01 | MTR_2g066150 | 35.962 | 317 | 149 | 10 | 19 | 334 | 7 | 270 | 7.09e-50 | 171 |
MsG0580030215.01.T01 | MTR_2g065860 | 36.637 | 333 | 165 | 14 | 19 | 339 | 7 | 305 | 1.34e-49 | 171 |
MsG0580030215.01.T01 | MTR_2g065840 | 35.455 | 330 | 172 | 10 | 19 | 339 | 7 | 304 | 3.15e-49 | 169 |
MsG0580030215.01.T01 | MTR_8g064890 | 37.461 | 323 | 164 | 11 | 23 | 338 | 15 | 306 | 1.65e-48 | 167 |
MsG0580030215.01.T01 | MTR_5g096910 | 37.386 | 329 | 158 | 12 | 23 | 338 | 16 | 309 | 3.26e-47 | 164 |
MsG0580030215.01.T01 | MTR_8g033090 | 37.500 | 352 | 161 | 13 | 17 | 337 | 7 | 330 | 3.80e-47 | 165 |
MsG0580030215.01.T01 | MTR_5g022850 | 36.446 | 332 | 129 | 8 | 17 | 338 | 11 | 270 | 8.14e-47 | 162 |
MsG0580030215.01.T01 | MTR_8g046220 | 36.313 | 358 | 150 | 14 | 15 | 337 | 8 | 322 | 1.38e-46 | 163 |
MsG0580030215.01.T01 | MTR_6g478230 | 36.915 | 363 | 166 | 14 | 1 | 338 | 1 | 325 | 2.90e-46 | 162 |
MsG0580030215.01.T01 | MTR_4g028750 | 36.842 | 342 | 176 | 12 | 11 | 338 | 1 | 316 | 4.42e-46 | 161 |
MsG0580030215.01.T01 | MTR_5g096900 | 38.938 | 339 | 155 | 14 | 18 | 339 | 6 | 309 | 6.94e-46 | 159 |
MsG0580030215.01.T01 | MTR_5g074850 | 37.830 | 341 | 158 | 17 | 24 | 341 | 35 | 344 | 1.17e-45 | 167 |
MsG0580030215.01.T01 | MTR_5g075370 | 36.628 | 344 | 163 | 15 | 23 | 341 | 7 | 320 | 1.62e-45 | 166 |
MsG0580030215.01.T01 | MTR_8g018110 | 37.621 | 311 | 143 | 11 | 17 | 303 | 7 | 290 | 2.52e-45 | 159 |
MsG0580030215.01.T01 | MTR_5g059430 | 35.792 | 366 | 184 | 17 | 1 | 338 | 1 | 343 | 2.96e-45 | 160 |
MsG0580030215.01.T01 | MTR_5g094350 | 37.209 | 301 | 139 | 10 | 23 | 307 | 12 | 278 | 3.01e-45 | 156 |
MsG0580030215.01.T01 | MTR_8g064790 | 34.688 | 320 | 133 | 8 | 23 | 341 | 14 | 258 | 7.88e-45 | 157 |
MsG0580030215.01.T01 | MTR_1g076810 | 40.816 | 245 | 124 | 6 | 1 | 245 | 1 | 224 | 2.16e-43 | 159 |
MsG0580030215.01.T01 | MTR_6g090250 | 37.805 | 328 | 159 | 13 | 42 | 338 | 29 | 342 | 2.40e-43 | 155 |
MsG0580030215.01.T01 | MTR_8g073570 | 47.486 | 179 | 76 | 7 | 23 | 200 | 9 | 170 | 2.43e-43 | 147 |
MsG0580030215.01.T01 | MTR_5g037190 | 38.176 | 296 | 131 | 10 | 1 | 290 | 1 | 250 | 1.27e-42 | 148 |
MsG0580030215.01.T01 | MTR_5g097820 | 36.577 | 298 | 139 | 11 | 6 | 288 | 7 | 269 | 1.04e-41 | 146 |
MsG0580030215.01.T01 | MTR_2g104260 | 39.456 | 294 | 139 | 11 | 17 | 296 | 9 | 277 | 1.26e-41 | 146 |
MsG0580030215.01.T01 | MTR_4g007940 | 36.996 | 273 | 136 | 11 | 80 | 337 | 8 | 259 | 2.82e-39 | 142 |
MsG0580030215.01.T01 | MTR_6g078010 | 38.462 | 247 | 115 | 10 | 102 | 339 | 36 | 254 | 4.63e-39 | 142 |
MsG0580030215.01.T01 | MTR_1g115205 | 37.993 | 279 | 112 | 8 | 4 | 272 | 9 | 236 | 8.98e-39 | 138 |
MsG0580030215.01.T01 | MTR_6g070880 | 40.741 | 243 | 114 | 9 | 19 | 245 | 27 | 255 | 9.16e-39 | 139 |
MsG0580030215.01.T01 | MTR_6g071420 | 40.741 | 243 | 114 | 9 | 19 | 245 | 27 | 255 | 9.16e-39 | 139 |
MsG0580030215.01.T01 | MTR_2g021920 | 49.068 | 161 | 67 | 4 | 189 | 338 | 37 | 193 | 1.89e-37 | 135 |
MsG0580030215.01.T01 | MTR_5g092860 | 33.861 | 316 | 147 | 12 | 42 | 338 | 20 | 292 | 2.71e-37 | 137 |
MsG0580030215.01.T01 | MTR_1g098180 | 32.635 | 334 | 165 | 11 | 5 | 338 | 1 | 274 | 6.47e-37 | 136 |
MsG0580030215.01.T01 | MTR_8g036970 | 34.194 | 310 | 129 | 11 | 32 | 339 | 6 | 242 | 1.27e-36 | 135 |
MsG0580030215.01.T01 | MTR_6g465360 | 42.857 | 203 | 90 | 9 | 17 | 208 | 57 | 244 | 2.31e-35 | 130 |
MsG0580030215.01.T01 | MTR_5g064700 | 36.789 | 299 | 156 | 9 | 63 | 338 | 1 | 289 | 2.90e-34 | 129 |
MsG0580030215.01.T01 | MTR_8g063370 | 31.962 | 316 | 172 | 11 | 32 | 341 | 32 | 310 | 6.63e-34 | 129 |
MsG0580030215.01.T01 | MTR_1g050312 | 37.190 | 242 | 100 | 10 | 102 | 339 | 16 | 209 | 1.64e-33 | 125 |
MsG0580030215.01.T01 | MTR_5g068490 | 36.709 | 237 | 110 | 9 | 104 | 339 | 1 | 198 | 9.65e-31 | 118 |
MsG0580030215.01.T01 | MTR_6g079790 | 37.238 | 239 | 123 | 9 | 114 | 338 | 2 | 227 | 1.09e-30 | 118 |
MsG0580030215.01.T01 | MTR_5g043605 | 37.447 | 235 | 114 | 10 | 112 | 341 | 54 | 260 | 1.28e-30 | 119 |
MsG0580030215.01.T01 | MTR_6g087620 | 35.366 | 246 | 108 | 9 | 103 | 338 | 2 | 206 | 4.03e-30 | 116 |
MsG0580030215.01.T01 | MTR_1g050308 | 33.198 | 247 | 131 | 9 | 2 | 245 | 20 | 235 | 8.19e-30 | 117 |
MsG0580030215.01.T01 | MTR_5g076490 | 38.281 | 256 | 107 | 11 | 102 | 338 | 31 | 254 | 6.31e-29 | 114 |
MsG0580030215.01.T01 | MTR_6g004450 | 44.375 | 160 | 72 | 7 | 181 | 337 | 41 | 186 | 3.55e-28 | 110 |
MsG0580030215.01.T01 | MTR_3g019290 | 35.398 | 226 | 85 | 9 | 17 | 235 | 7 | 178 | 1.98e-26 | 103 |
MsG0580030215.01.T01 | MTR_5g086590 | 35.644 | 202 | 98 | 7 | 145 | 339 | 2 | 178 | 6.49e-26 | 103 |
MsG0580030215.01.T01 | MTR_6g009350 | 45.912 | 159 | 71 | 7 | 183 | 337 | 2 | 149 | 1.01e-25 | 102 |
MsG0580030215.01.T01 | MTR_5g091150 | 35.294 | 255 | 87 | 11 | 114 | 344 | 2 | 202 | 2.24e-24 | 99.0 |
MsG0580030215.01.T01 | MTR_5g097650 | 39.080 | 174 | 82 | 5 | 1 | 174 | 1 | 150 | 3.58e-24 | 97.1 |
MsG0580030215.01.T01 | MTR_4g016000 | 38.298 | 188 | 73 | 8 | 161 | 337 | 2 | 157 | 1.49e-23 | 97.1 |
MsG0580030215.01.T01 | MTR_4g014370 | 42.754 | 138 | 67 | 4 | 12 | 145 | 10 | 139 | 5.09e-23 | 98.2 |
MsG0580030215.01.T01 | MTR_4g014370 | 42.500 | 120 | 57 | 5 | 221 | 338 | 146 | 255 | 8.78e-15 | 74.7 |
MsG0580030215.01.T01 | MTR_8g063310 | 28.875 | 329 | 183 | 18 | 23 | 337 | 21 | 312 | 9.45e-23 | 98.6 |
MsG0580030215.01.T01 | MTR_8g063350 | 29.448 | 326 | 141 | 15 | 24 | 338 | 14 | 261 | 1.24e-22 | 97.4 |
MsG0580030215.01.T01 | MTR_3g018750 | 38.272 | 162 | 80 | 4 | 189 | 338 | 3 | 156 | 1.62e-22 | 95.1 |
MsG0580030215.01.T01 | MTR_7g023800 | 32.143 | 252 | 108 | 9 | 98 | 338 | 30 | 229 | 9.42e-21 | 91.7 |
MsG0580030215.01.T01 | MTR_1g047080 | 31.579 | 285 | 135 | 12 | 61 | 335 | 1 | 235 | 2.88e-20 | 89.7 |
MsG0580030215.01.T01 | MTR_8g035690 | 36.500 | 200 | 76 | 12 | 169 | 337 | 40 | 219 | 1.45e-19 | 88.2 |
MsG0580030215.01.T01 | MTR_5g096070 | 36.000 | 175 | 72 | 4 | 23 | 197 | 25 | 159 | 1.49e-19 | 84.7 |
MsG0580030215.01.T01 | MTR_3g034130 | 29.431 | 299 | 164 | 14 | 16 | 305 | 1 | 261 | 1.84e-18 | 85.9 |
MsG0580030215.01.T01 | MTR_6g090260 | 45.614 | 114 | 56 | 3 | 227 | 339 | 73 | 181 | 1.96e-17 | 81.3 |
MsG0580030215.01.T01 | MTR_6g090260 | 54.286 | 70 | 28 | 2 | 1 | 70 | 1 | 66 | 5.12e-13 | 68.6 |
MsG0580030215.01.T01 | MTR_4g023090 | 26.822 | 343 | 175 | 16 | 11 | 337 | 2 | 284 | 4.07e-17 | 82.0 |
MsG0580030215.01.T01 | MTR_5g023970 | 44.348 | 115 | 57 | 4 | 224 | 338 | 6 | 113 | 6.14e-17 | 78.6 |
MsG0580030215.01.T01 | MTR_7g019250 | 35.465 | 172 | 83 | 7 | 170 | 337 | 206 | 353 | 8.33e-17 | 81.6 |
MsG0580030215.01.T01 | MTR_2g021150 | 29.268 | 287 | 157 | 13 | 26 | 307 | 16 | 261 | 9.26e-17 | 80.9 |
MsG0580030215.01.T01 | MTR_1g037540 | 25.373 | 335 | 183 | 14 | 27 | 329 | 8 | 307 | 1.19e-16 | 80.9 |
MsG0580030215.01.T01 | MTR_7g101200 | 35.838 | 173 | 83 | 9 | 156 | 326 | 38 | 184 | 1.20e-16 | 78.6 |
MsG0580030215.01.T01 | MTR_3g013740 | 27.660 | 282 | 156 | 12 | 32 | 301 | 52 | 297 | 1.48e-16 | 80.5 |
MsG0580030215.01.T01 | MTR_4g116330 | 30.182 | 275 | 147 | 13 | 27 | 300 | 26 | 256 | 2.83e-16 | 79.3 |
MsG0580030215.01.T01 | MTR_4g094365 | 28.621 | 290 | 154 | 13 | 20 | 304 | 4 | 245 | 4.57e-16 | 78.6 |
MsG0580030215.01.T01 | MTR_8g041440 | 40.566 | 106 | 39 | 2 | 14 | 119 | 5 | 86 | 8.96e-16 | 73.2 |
MsG0580030215.01.T01 | MTR_3g006670 | 28.521 | 284 | 149 | 15 | 27 | 300 | 52 | 291 | 9.32e-16 | 78.2 |
MsG0580030215.01.T01 | MTR_7g017150 | 42.857 | 119 | 59 | 4 | 221 | 338 | 74 | 184 | 1.12e-15 | 76.3 |
MsG0580030215.01.T01 | MTR_4g116330 | 31.020 | 245 | 127 | 11 | 27 | 271 | 26 | 228 | 1.97e-15 | 76.6 |
MsG0580030215.01.T01 | MTR_5g011200 | 26.299 | 308 | 174 | 14 | 27 | 328 | 20 | 280 | 4.15e-15 | 75.9 |
MsG0580030215.01.T01 | MTR_0115s0020 | 26.814 | 317 | 178 | 14 | 5 | 308 | 1 | 276 | 6.01e-15 | 75.5 |
MsG0580030215.01.T01 | MTR_6g027910 | 25.786 | 318 | 186 | 13 | 24 | 328 | 9 | 289 | 7.40e-15 | 75.1 |
MsG0580030215.01.T01 | MTR_7g017120 | 41.176 | 119 | 61 | 4 | 221 | 338 | 73 | 183 | 1.06e-14 | 73.6 |
MsG0580030215.01.T01 | MTR_5g057790 | 25.899 | 278 | 159 | 9 | 27 | 300 | 49 | 283 | 1.39e-14 | 74.7 |
MsG0580030215.01.T01 | MTR_5g057710 | 26.642 | 274 | 162 | 9 | 27 | 300 | 49 | 283 | 1.71e-14 | 74.3 |
MsG0580030215.01.T01 | MTR_4g109280 | 29.195 | 298 | 160 | 12 | 23 | 316 | 7 | 257 | 1.81e-14 | 73.9 |
MsG0580030215.01.T01 | MTR_5g097850 | 29.515 | 227 | 82 | 9 | 123 | 338 | 5 | 164 | 3.22e-14 | 72.0 |
MsG0580030215.01.T01 | MTR_4g116340 | 30.483 | 269 | 126 | 14 | 11 | 273 | 21 | 234 | 3.88e-14 | 71.6 |
MsG0580030215.01.T01 | MTR_3g047580 | 30.723 | 166 | 74 | 6 | 7 | 170 | 1 | 127 | 4.04e-14 | 68.9 |
MsG0580030215.01.T01 | MTR_4g024890 | 25.517 | 290 | 170 | 11 | 26 | 306 | 12 | 264 | 4.35e-14 | 73.2 |
MsG0580030215.01.T01 | MTR_1g009110 | 25.442 | 283 | 180 | 9 | 21 | 300 | 11 | 265 | 6.80e-14 | 72.4 |
MsG0580030215.01.T01 | MTR_4g117850 | 27.431 | 288 | 151 | 11 | 23 | 302 | 22 | 259 | 8.53e-14 | 72.0 |
MsG0580030215.01.T01 | MTR_2g021860 | 36.667 | 120 | 60 | 5 | 113 | 225 | 14 | 124 | 8.79e-14 | 68.2 |
MsG0580030215.01.T01 | MTR_1g068835 | 27.500 | 280 | 149 | 13 | 32 | 305 | 12 | 243 | 1.55e-13 | 71.2 |
MsG0580030215.01.T01 | MTR_3g009310 | 27.719 | 285 | 148 | 13 | 27 | 301 | 45 | 281 | 3.49e-13 | 70.5 |
MsG0580030215.01.T01 | MTR_1g068875 | 27.622 | 286 | 140 | 14 | 32 | 305 | 12 | 242 | 3.50e-13 | 70.1 |
MsG0580030215.01.T01 | MTR_0667s0010 | 25.965 | 285 | 157 | 14 | 32 | 305 | 14 | 255 | 3.73e-13 | 70.5 |
MsG0580030215.01.T01 | MTR_3g006570 | 24.843 | 318 | 166 | 14 | 27 | 330 | 24 | 282 | 5.57e-13 | 69.7 |
MsG0580030215.01.T01 | MTR_2g055970 | 25.490 | 306 | 173 | 11 | 2 | 300 | 188 | 445 | 5.95e-13 | 70.1 |
MsG0580030215.01.T01 | MTR_5g094360 | 47.368 | 95 | 39 | 6 | 166 | 253 | 40 | 130 | 6.49e-13 | 66.2 |
MsG0580030215.01.T01 | MTR_4g030830 | 27.063 | 303 | 143 | 12 | 27 | 300 | 12 | 265 | 6.87e-13 | 69.3 |
MsG0580030215.01.T01 | MTR_0760s0010 | 25.843 | 267 | 138 | 11 | 32 | 292 | 55 | 267 | 1.03e-12 | 68.9 |
MsG0580030215.01.T01 | MTR_3g036335 | 23.102 | 303 | 182 | 11 | 27 | 322 | 44 | 302 | 1.06e-12 | 68.9 |
MsG0580030215.01.T01 | MTR_4g133170 | 26.421 | 299 | 165 | 14 | 32 | 322 | 12 | 263 | 1.30e-12 | 68.6 |
MsG0580030215.01.T01 | MTR_8g032390 | 26.370 | 292 | 154 | 9 | 17 | 308 | 33 | 263 | 1.46e-12 | 68.2 |
MsG0580030215.01.T01 | MTR_3g058480 | 26.429 | 280 | 171 | 9 | 27 | 305 | 42 | 287 | 1.53e-12 | 68.2 |
MsG0580030215.01.T01 | MTR_1g097490 | 25.084 | 299 | 168 | 11 | 27 | 318 | 52 | 301 | 1.56e-12 | 68.6 |
MsG0580030215.01.T01 | MTR_4g030090 | 26.748 | 329 | 185 | 14 | 26 | 340 | 16 | 302 | 2.62e-12 | 67.8 |
MsG0580030215.01.T01 | MTR_5g086780 | 46.875 | 64 | 34 | 0 | 153 | 216 | 61 | 124 | 2.76e-12 | 65.9 |
MsG0580030215.01.T01 | MTR_5g086780 | 46.591 | 88 | 36 | 3 | 17 | 102 | 11 | 89 | 3.27e-12 | 65.9 |
MsG0580030215.01.T01 | MTR_7g407070 | 27.687 | 307 | 174 | 15 | 32 | 327 | 40 | 309 | 3.06e-12 | 67.4 |
MsG0580030215.01.T01 | MTR_2g024110 | 23.511 | 319 | 183 | 13 | 24 | 338 | 4 | 265 | 3.15e-12 | 67.4 |
MsG0580030215.01.T01 | MTR_2g028110 | 25.857 | 321 | 176 | 15 | 32 | 341 | 12 | 281 | 3.16e-12 | 67.4 |
MsG0580030215.01.T01 | MTR_8g062660 | 27.740 | 292 | 137 | 15 | 32 | 301 | 30 | 269 | 3.83e-12 | 67.8 |
MsG0580030215.01.T01 | MTR_5g096050 | 42.169 | 83 | 38 | 1 | 265 | 337 | 1 | 83 | 3.95e-12 | 63.2 |
MsG0580030215.01.T01 | MTR_2g031720 | 23.988 | 321 | 192 | 10 | 27 | 341 | 9 | 283 | 4.18e-12 | 67.0 |
MsG0580030215.01.T01 | MTR_2g046900 | 24.465 | 327 | 181 | 13 | 26 | 340 | 30 | 302 | 4.32e-12 | 67.0 |
MsG0580030215.01.T01 | MTR_4g114700 | 38.889 | 126 | 59 | 7 | 159 | 281 | 22 | 132 | 4.71e-12 | 65.5 |
MsG0580030215.01.T01 | MTR_7g079370 | 31.395 | 172 | 100 | 7 | 159 | 324 | 98 | 257 | 5.31e-12 | 66.6 |
MsG0580030215.01.T01 | MTR_3g024110 | 26.642 | 274 | 153 | 12 | 27 | 300 | 104 | 329 | 6.15e-12 | 66.6 |
MsG0580030215.01.T01 | MTR_3g058470 | 26.957 | 230 | 123 | 7 | 27 | 245 | 40 | 235 | 6.43e-12 | 66.2 |
MsG0580030215.01.T01 | MTR_6g048140 | 27.372 | 274 | 136 | 14 | 32 | 292 | 47 | 270 | 7.42e-12 | 66.2 |
MsG0580030215.01.T01 | MTR_4g055060 | 25.795 | 283 | 166 | 13 | 27 | 302 | 33 | 278 | 1.15e-11 | 65.9 |
MsG0580030215.01.T01 | MTR_5g007610 | 24.825 | 286 | 166 | 12 | 27 | 301 | 44 | 291 | 1.28e-11 | 65.5 |
MsG0580030215.01.T01 | MTR_1g055070 | 23.944 | 284 | 158 | 10 | 27 | 292 | 52 | 295 | 1.49e-11 | 65.5 |
MsG0580030215.01.T01 | MTR_3g006530 | 26.545 | 275 | 150 | 13 | 27 | 292 | 43 | 274 | 1.62e-11 | 65.5 |
MsG0580030215.01.T01 | MTR_3g009240 | 27.184 | 309 | 162 | 15 | 27 | 326 | 39 | 293 | 1.83e-11 | 65.1 |
MsG0580030215.01.T01 | MTR_2g078900 | 25.818 | 275 | 156 | 10 | 27 | 300 | 36 | 263 | 2.90e-11 | 64.3 |
MsG0580030215.01.T01 | MTR_7g055870 | 27.010 | 311 | 173 | 13 | 24 | 305 | 13 | 298 | 6.49e-11 | 63.5 |
MsG0580030215.01.T01 | MTR_6g048120 | 27.304 | 293 | 168 | 13 | 27 | 312 | 39 | 293 | 8.41e-11 | 63.2 |
MsG0580030215.01.T01 | MTR_3g030350 | 24.476 | 286 | 159 | 9 | 27 | 306 | 38 | 272 | 8.66e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030215.01.T01 | AT3G06240 | 25.074 | 339 | 189 | 15 | 32 | 343 | 44 | 344 | 4.18e-14 | 73.2 |
Find 84 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGAATTTGTACCACCTTAT+CGG | 0.285420 | 5:-108356180 | MsG0580030215.01.T01:CDS |
CTCAAATCTTTGAAGCGGTT+TGG | 0.292207 | 5:-108356592 | MsG0580030215.01.T01:CDS |
ATAGCTTCCGAGCTGTATTA+TGG | 0.300215 | 5:-108356246 | MsG0580030215.01.T01:CDS |
ACTCTGGATTCCGCTGTTGC+CGG | 0.305022 | 5:+108356220 | None:intergenic |
GATTGAAGAGTTAAAGTTAA+AGG | 0.315476 | 5:-108356674 | MsG0580030215.01.T01:CDS |
TCTTCATCTTCGTCGGTTGT+AGG | 0.365785 | 5:+108356076 | None:intergenic |
GGACTGTGGTAACGGTATTC+AGG | 0.375729 | 5:+108356424 | None:intergenic |
TCAGGTGTCACAGGCAGTTC+AGG | 0.377175 | 5:+108356442 | None:intergenic |
GATGAGCCGCGGACCAGTTC+CGG | 0.377286 | 5:-108355941 | MsG0580030215.01.T01:CDS |
CTATCTTCAAACCTCTCATT+GGG | 0.393103 | 5:+108356388 | None:intergenic |
CTCTGGATTCCGCTGTTGCC+GGG | 0.393419 | 5:+108356221 | None:intergenic |
TCCGCACTCATTTCTCATCT+TGG | 0.404158 | 5:-108356513 | MsG0580030215.01.T01:CDS |
TTATAGTTCAACAGGTTGTT+TGG | 0.404446 | 5:-108355873 | MsG0580030215.01.T01:CDS |
TTAAGTTCCGTTAGTGTCAA+TGG | 0.410393 | 5:-108356310 | MsG0580030215.01.T01:CDS |
CCTATCTTCAAACCTCTCAT+TGG | 0.426897 | 5:+108356387 | None:intergenic |
GTGGCAGATGGAGAAATCTA+TGG | 0.445713 | 5:-108356710 | None:intergenic |
CCAATGAGAGGTTTGAAGAT+AGG | 0.448245 | 5:-108356387 | MsG0580030215.01.T01:CDS |
ATAGTCTTAGAAGTAACTCT+TGG | 0.471541 | 5:-108356009 | MsG0580030215.01.T01:CDS |
CGGCTCATCATAAACACAAT+CGG | 0.472123 | 5:+108355955 | None:intergenic |
CTTCATCTTCGTCGGTTGTA+GGG | 0.472855 | 5:+108356077 | None:intergenic |
GTCAATGGTATTCTTTGTCT+CGG | 0.483197 | 5:-108356295 | MsG0580030215.01.T01:CDS |
GTTCATGTACACTCCGGAAC+TGG | 0.483226 | 5:+108355928 | None:intergenic |
TTCTTTGTCTCGGTCAAGAT+CGG | 0.486170 | 5:-108356285 | MsG0580030215.01.T01:CDS |
TGGTACAAATTCATCAGGAC+TGG | 0.489151 | 5:+108356189 | None:intergenic |
CGGAGCATGTTCATGAAATG+AGG | 0.491682 | 5:+108356532 | None:intergenic |
TAAGGTGGTACAAATTCATC+AGG | 0.495182 | 5:+108356184 | None:intergenic |
TTGGATGCGTACGCAAATCA+TGG | 0.498435 | 5:-108356573 | MsG0580030215.01.T01:CDS |
GGCTCATCATAAACACAATC+GGG | 0.509137 | 5:+108355956 | None:intergenic |
TACCTCTCAAATCTTTGAAG+CGG | 0.514786 | 5:-108356597 | MsG0580030215.01.T01:CDS |
TAGACAACACCTCGTTGCTC+AGG | 0.517484 | 5:+108355840 | None:intergenic |
TCATCGTTGTCTGAGGGCAT+AGG | 0.518222 | 5:+108355812 | None:intergenic |
ACATGAACGGAGCGTGTCAT+TGG | 0.518328 | 5:-108355913 | MsG0580030215.01.T01:CDS |
GTCTTAGAAGTAACTCTTGG+AGG | 0.525695 | 5:-108356006 | MsG0580030215.01.T01:CDS |
CAACTTTCATCGTTGTCTGA+GGG | 0.528263 | 5:+108355806 | None:intergenic |
TGAACGGAGCGTGTCATTGG+TGG | 0.537883 | 5:-108355910 | MsG0580030215.01.T01:CDS |
TGGCACATCTTCATCTTCGT+CGG | 0.541594 | 5:+108356069 | None:intergenic |
AGGACTGGGAGGGATGACTC+TGG | 0.541892 | 5:+108356204 | None:intergenic |
CGTATCACCACCGCCGTGAT+CGG | 0.543887 | 5:+108356483 | None:intergenic |
ACAACTTTCATCGTTGTCTG+AGG | 0.544889 | 5:+108355805 | None:intergenic |
GAACGGAGCGTGTCATTGGT+GGG | 0.547748 | 5:-108355909 | MsG0580030215.01.T01:CDS |
TAACGGTATTCAGGTGTCAC+AGG | 0.555692 | 5:+108356433 | None:intergenic |
TCGGTCAAGATCGGAGGAGA+GGG | 0.558030 | 5:-108356276 | MsG0580030215.01.T01:CDS |
AACAGTTCCGATCACGGCGG+TGG | 0.559592 | 5:-108356490 | MsG0580030215.01.T01:CDS |
AGACTATATATCTCCAACAC+GGG | 0.561754 | 5:+108356025 | None:intergenic |
CGAAGATGAAGATGTGCCAT+GGG | 0.562404 | 5:-108356065 | MsG0580030215.01.T01:CDS |
ACGAAGATGAAGATGTGCCA+TGG | 0.565525 | 5:-108356066 | MsG0580030215.01.T01:CDS |
CCGAGCTGTATTATGGAACC+CGG | 0.570508 | 5:-108356239 | MsG0580030215.01.T01:CDS |
TTTGCCACCTCAGTTTCAAG+AGG | 0.579122 | 5:-108356353 | MsG0580030215.01.T01:CDS |
TCTATTTGCTCCCCAATGAG+AGG | 0.579627 | 5:-108356399 | MsG0580030215.01.T01:CDS |
TTTGGGCGAACTCGGCGTGA+AGG | 0.582555 | 5:-108355688 | None:intergenic |
GATGGAGAAATCTATGGCAG+TGG | 0.589806 | 5:-108356704 | MsG0580030215.01.T01:CDS |
CTCGGTCAAGATCGGAGGAG+AGG | 0.592033 | 5:-108356277 | MsG0580030215.01.T01:CDS |
GGTACAAATTCATCAGGACT+GGG | 0.595193 | 5:+108356190 | None:intergenic |
TCTTGGAACAGTTCCGATCA+CGG | 0.597535 | 5:-108356496 | MsG0580030215.01.T01:CDS |
AATAGAACGGACTGTGGTAA+CGG | 0.607433 | 5:+108356416 | None:intergenic |
AAGAATACCATTGACACTAA+CGG | 0.608584 | 5:+108356303 | None:intergenic |
ATTATGGAACCCGGCAACAG+CGG | 0.609886 | 5:-108356230 | MsG0580030215.01.T01:CDS |
AACGGAGCGTGTCATTGGTG+GGG | 0.610039 | 5:-108355908 | MsG0580030215.01.T01:CDS |
TGTAGTCATACAAAGACACT+TGG | 0.613517 | 5:-108355777 | MsG0580030215.01.T01:CDS |
CTGTCATCCTCTTGAAACTG+AGG | 0.615278 | 5:+108356346 | None:intergenic |
TCATCCTCTTGAAACTGAGG+TGG | 0.625982 | 5:+108356349 | None:intergenic |
CCGGGTTCCATAATACAGCT+CGG | 0.629732 | 5:+108356239 | None:intergenic |
TTTGTCTCGGTCAAGATCGG+AGG | 0.632959 | 5:-108356282 | MsG0580030215.01.T01:CDS |
CTTTATAGTCATCTCTAACA+CGG | 0.633514 | 5:+108356122 | None:intergenic |
GGAGCATGTTCATGAAATGA+GGG | 0.635076 | 5:+108356533 | None:intergenic |
AACCGCTTCAAAGATTTGAG+AGG | 0.639840 | 5:+108356595 | None:intergenic |
AGTCATACAAAGACACTTGG+TGG | 0.641050 | 5:-108355774 | MsG0580030215.01.T01:CDS |
TCATACGATCTATCTTCCCA+TGG | 0.642796 | 5:+108356049 | None:intergenic |
CAAATTCATCAGGACTGGGA+GGG | 0.646780 | 5:+108356194 | None:intergenic |
TACACTCCGGAACTGGTCCG+CGG | 0.650148 | 5:+108355935 | None:intergenic |
CAGGCAGTTCAGGCTCCTGT+AGG | 0.651664 | 5:+108356452 | None:intergenic |
TAGATCGTATGACCCCGTGT+TGG | 0.654881 | 5:-108356038 | MsG0580030215.01.T01:CDS |
AAGACTATATATCTCCAACA+CGG | 0.657084 | 5:+108356024 | None:intergenic |
CGCTCCGTTCATGTACACTC+CGG | 0.662548 | 5:+108355922 | None:intergenic |
ACAAATTCATCAGGACTGGG+AGG | 0.674840 | 5:+108356193 | None:intergenic |
AGTTCCGGAGTGTACATGAA+CGG | 0.676240 | 5:-108355926 | MsG0580030215.01.T01:CDS |
ATTGTGTTTATGATGAGCCG+CGG | 0.677843 | 5:-108355952 | MsG0580030215.01.T01:CDS |
TCATTGGGGAGCAAATAGAA+CGG | 0.693333 | 5:+108356403 | None:intergenic |
TATCTTCAAACCTCTCATTG+GGG | 0.704320 | 5:+108356389 | None:intergenic |
GGAGCAAATAGAACGGACTG+TGG | 0.720534 | 5:+108356410 | None:intergenic |
TCCAAGATGAGAAATGAGTG+CGG | 0.727958 | 5:+108356512 | None:intergenic |
GACTATATATCTCCAACACG+GGG | 0.729854 | 5:+108356026 | None:intergenic |
GTCATTTGACCTGAGCAACG+AGG | 0.784782 | 5:-108355849 | MsG0580030215.01.T01:CDS |
TGGAACAGTTCCGATCACGG+CGG | 0.823343 | 5:-108356493 | MsG0580030215.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTTTGATAAAATGAAAA+GGG | + | Chr5:108355779-108355798 | None:intergenic | 10.0% |
!!! | GTAATTTTGATAAAATGAAA+AGG | + | Chr5:108355780-108355799 | None:intergenic | 15.0% |
!! | AATCCATGAAATTCAAAAAA+AGG | + | Chr5:108356243-108356262 | None:intergenic | 20.0% |
!! | ATCCATGAAATTCAAAAAAA+GGG | + | Chr5:108356242-108356261 | None:intergenic | 20.0% |
!!! | AATGATTTTTATAGTTCAAC+AGG | - | Chr5:108356513-108356532 | MsG0580030215.01.T01:CDS | 20.0% |
!!! | TACTTTTCACATTTCATTTT+GGG | - | Chr5:108356689-108356708 | MsG0580030215.01.T01:CDS | 20.0% |
!!! | TTTTTTGAATTTCATGGATT+TGG | - | Chr5:108356243-108356262 | MsG0580030215.01.T01:CDS | 20.0% |
! | GATTGAAGAGTTAAAGTTAA+AGG | - | Chr5:108355720-108355739 | MsG0580030215.01.T01:CDS | 25.0% |
!!! | AACCCTTTTTTTGAATTTCA+TGG | - | Chr5:108356237-108356256 | MsG0580030215.01.T01:CDS | 25.0% |
!!! | CTACTTTTCACATTTCATTT+TGG | - | Chr5:108356688-108356707 | MsG0580030215.01.T01:CDS | 25.0% |
AAGAATACCATTGACACTAA+CGG | + | Chr5:108356094-108356113 | None:intergenic | 30.0% | |
AAGACTATATATCTCCAACA+CGG | + | Chr5:108356373-108356392 | None:intergenic | 30.0% | |
ATGAATTTGTACCACCTTAT+CGG | - | Chr5:108356214-108356233 | MsG0580030215.01.T01:CDS | 30.0% | |
CTTTATAGTCATCTCTAACA+CGG | + | Chr5:108356275-108356294 | None:intergenic | 30.0% | |
TTATAGTTCAACAGGTTGTT+TGG | - | Chr5:108356521-108356540 | MsG0580030215.01.T01:CDS | 30.0% | |
! | ATAGTCTTAGAAGTAACTCT+TGG | - | Chr5:108356385-108356404 | MsG0580030215.01.T01:CDS | 30.0% |
AGACTATATATCTCCAACAC+GGG | + | Chr5:108356372-108356391 | None:intergenic | 35.0% | |
CTATCTTCAAACCTCTCATT+GGG | + | Chr5:108356009-108356028 | None:intergenic | 35.0% | |
GTCAATGGTATTCTTTGTCT+CGG | - | Chr5:108356099-108356118 | MsG0580030215.01.T01:CDS | 35.0% | |
TAAGGTGGTACAAATTCATC+AGG | + | Chr5:108356213-108356232 | None:intergenic | 35.0% | |
TATCTTCAAACCTCTCATTG+GGG | + | Chr5:108356008-108356027 | None:intergenic | 35.0% | |
TCAAAAAAAGGGTTCCGATA+AGG | + | Chr5:108356231-108356250 | None:intergenic | 35.0% | |
TGTAGTCATACAAAGACACT+TGG | - | Chr5:108356617-108356636 | MsG0580030215.01.T01:CDS | 35.0% | |
TTAAGTTCCGTTAGTGTCAA+TGG | - | Chr5:108356084-108356103 | MsG0580030215.01.T01:CDS | 35.0% | |
! | TACCTCTCAAATCTTTGAAG+CGG | - | Chr5:108355797-108355816 | MsG0580030215.01.T01:CDS | 35.0% |
! | TGATACGTTTCTTTTCCTAC+AGG | - | Chr5:108355927-108355946 | MsG0580030215.01.T01:CDS | 35.0% |
AAAAAAGGGTTCCGATAAGG+TGG | + | Chr5:108356228-108356247 | None:intergenic | 40.0% | |
AACCGCTTCAAAGATTTGAG+AGG | + | Chr5:108355802-108355821 | None:intergenic | 40.0% | |
ACAACTTTCATCGTTGTCTG+AGG | + | Chr5:108356592-108356611 | None:intergenic | 40.0% | |
AGTCATACAAAGACACTTGG+TGG | - | Chr5:108356620-108356639 | MsG0580030215.01.T01:CDS | 40.0% | |
ATAGCTTCCGAGCTGTATTA+TGG | - | Chr5:108356148-108356167 | MsG0580030215.01.T01:CDS | 40.0% | |
ATTGTGTTTATGATGAGCCG+CGG | - | Chr5:108356442-108356461 | MsG0580030215.01.T01:CDS | 40.0% | |
CAACTTTCATCGTTGTCTGA+GGG | + | Chr5:108356591-108356610 | None:intergenic | 40.0% | |
CCAATGAGAGGTTTGAAGAT+AGG | - | Chr5:108356007-108356026 | MsG0580030215.01.T01:CDS | 40.0% | |
CCTATCTTCAAACCTCTCAT+TGG | + | Chr5:108356010-108356029 | None:intergenic | 40.0% | |
CGGCTCATCATAAACACAAT+CGG | + | Chr5:108356442-108356461 | None:intergenic | 40.0% | |
GACTATATATCTCCAACACG+GGG | + | Chr5:108356371-108356390 | None:intergenic | 40.0% | |
GGAGCATGTTCATGAAATGA+GGG | + | Chr5:108355864-108355883 | None:intergenic | 40.0% | |
GGCTCATCATAAACACAATC+GGG | + | Chr5:108356441-108356460 | None:intergenic | 40.0% | |
GGTACAAATTCATCAGGACT+GGG | + | Chr5:108356207-108356226 | None:intergenic | 40.0% | |
GTCTTAGAAGTAACTCTTGG+AGG | - | Chr5:108356388-108356407 | MsG0580030215.01.T01:CDS | 40.0% | |
TCATACGATCTATCTTCCCA+TGG | + | Chr5:108356348-108356367 | None:intergenic | 40.0% | |
TCATTGGGGAGCAAATAGAA+CGG | + | Chr5:108355994-108356013 | None:intergenic | 40.0% | |
TCCAAGATGAGAAATGAGTG+CGG | + | Chr5:108355885-108355904 | None:intergenic | 40.0% | |
TGGTACAAATTCATCAGGAC+TGG | + | Chr5:108356208-108356227 | None:intergenic | 40.0% | |
TTCTTTGTCTCGGTCAAGAT+CGG | - | Chr5:108356109-108356128 | MsG0580030215.01.T01:CDS | 40.0% | |
! | CATTTCATTTTGGGCGAACT+CGG | - | Chr5:108356698-108356717 | MsG0580030215.01.T01:CDS | 40.0% |
!! | AATAGAACGGACTGTGGTAA+CGG | + | Chr5:108355981-108356000 | None:intergenic | 40.0% |
!! | CTCAAATCTTTGAAGCGGTT+TGG | - | Chr5:108355802-108355821 | MsG0580030215.01.T01:CDS | 40.0% |
ACAAATTCATCAGGACTGGG+AGG | + | Chr5:108356204-108356223 | None:intergenic | 45.0% | |
ACGAAGATGAAGATGTGCCA+TGG | - | Chr5:108356328-108356347 | MsG0580030215.01.T01:CDS | 45.0% | |
AGTTCCGGAGTGTACATGAA+CGG | - | Chr5:108356468-108356487 | MsG0580030215.01.T01:CDS | 45.0% | |
CAAATTCATCAGGACTGGGA+GGG | + | Chr5:108356203-108356222 | None:intergenic | 45.0% | |
CGAAGATGAAGATGTGCCAT+GGG | - | Chr5:108356329-108356348 | MsG0580030215.01.T01:CDS | 45.0% | |
CGGAGCATGTTCATGAAATG+AGG | + | Chr5:108355865-108355884 | None:intergenic | 45.0% | |
CTGTCATCCTCTTGAAACTG+AGG | + | Chr5:108356051-108356070 | None:intergenic | 45.0% | |
TCATCCTCTTGAAACTGAGG+TGG | + | Chr5:108356048-108356067 | None:intergenic | 45.0% | |
TCCGCACTCATTTCTCATCT+TGG | - | Chr5:108355881-108355900 | MsG0580030215.01.T01:CDS | 45.0% | |
TCTATTTGCTCCCCAATGAG+AGG | - | Chr5:108355995-108356014 | MsG0580030215.01.T01:CDS | 45.0% | |
TCTTGGAACAGTTCCGATCA+CGG | - | Chr5:108355898-108355917 | MsG0580030215.01.T01:CDS | 45.0% | |
TGGCACATCTTCATCTTCGT+CGG | + | Chr5:108356328-108356347 | None:intergenic | 45.0% | |
TTGGATGCGTACGCAAATCA+TGG | - | Chr5:108355821-108355840 | MsG0580030215.01.T01:CDS | 45.0% | |
TTTGCCACCTCAGTTTCAAG+AGG | - | Chr5:108356041-108356060 | MsG0580030215.01.T01:CDS | 45.0% | |
! | CTTCATCTTCGTCGGTTGTA+GGG | + | Chr5:108356320-108356339 | None:intergenic | 45.0% |
! | TAACGGTATTCAGGTGTCAC+AGG | + | Chr5:108355964-108355983 | None:intergenic | 45.0% |
! | TCTTCATCTTCGTCGGTTGT+AGG | + | Chr5:108356321-108356340 | None:intergenic | 45.0% |
ACATGAACGGAGCGTGTCAT+TGG | - | Chr5:108356481-108356500 | MsG0580030215.01.T01:CDS | 50.0% | |
ATTATGGAACCCGGCAACAG+CGG | - | Chr5:108356164-108356183 | MsG0580030215.01.T01:CDS | 50.0% | |
CCGAGCTGTATTATGGAACC+CGG | - | Chr5:108356155-108356174 | MsG0580030215.01.T01:CDS | 50.0% | |
CCGGGTTCCATAATACAGCT+CGG | + | Chr5:108356158-108356177 | None:intergenic | 50.0% | |
GTCATTTGACCTGAGCAACG+AGG | - | Chr5:108356545-108356564 | MsG0580030215.01.T01:CDS | 50.0% | |
GTTCATGTACACTCCGGAAC+TGG | + | Chr5:108356469-108356488 | None:intergenic | 50.0% | |
TAGACAACACCTCGTTGCTC+AGG | + | Chr5:108356557-108356576 | None:intergenic | 50.0% | |
TAGATCGTATGACCCCGTGT+TGG | - | Chr5:108356356-108356375 | MsG0580030215.01.T01:CDS | 50.0% | |
TTTGTCTCGGTCAAGATCGG+AGG | - | Chr5:108356112-108356131 | MsG0580030215.01.T01:CDS | 50.0% | |
! | TCATCGTTGTCTGAGGGCAT+AGG | + | Chr5:108356585-108356604 | None:intergenic | 50.0% |
!! | GGACTGTGGTAACGGTATTC+AGG | + | Chr5:108355973-108355992 | None:intergenic | 50.0% |
!! | GGAGCAAATAGAACGGACTG+TGG | + | Chr5:108355987-108356006 | None:intergenic | 50.0% |
ACTCTGGATTCCGCTGTTGC+CGG | + | Chr5:108356177-108356196 | None:intergenic | 55.0% | |
CGCTCCGTTCATGTACACTC+CGG | + | Chr5:108356475-108356494 | None:intergenic | 55.0% | |
TCGGTCAAGATCGGAGGAGA+GGG | - | Chr5:108356118-108356137 | MsG0580030215.01.T01:CDS | 55.0% | |
TGGAACAGTTCCGATCACGG+CGG | - | Chr5:108355901-108355920 | MsG0580030215.01.T01:CDS | 55.0% | |
! | AACGGAGCGTGTCATTGGTG+GGG | - | Chr5:108356486-108356505 | MsG0580030215.01.T01:CDS | 55.0% |
! | GAACGGAGCGTGTCATTGGT+GGG | - | Chr5:108356485-108356504 | MsG0580030215.01.T01:CDS | 55.0% |
! | TCAGGTGTCACAGGCAGTTC+AGG | + | Chr5:108355955-108355974 | None:intergenic | 55.0% |
! | TGAACGGAGCGTGTCATTGG+TGG | - | Chr5:108356484-108356503 | MsG0580030215.01.T01:CDS | 55.0% |
AACAGTTCCGATCACGGCGG+TGG | - | Chr5:108355904-108355923 | MsG0580030215.01.T01:CDS | 60.0% | |
AGGACTGGGAGGGATGACTC+TGG | + | Chr5:108356193-108356212 | None:intergenic | 60.0% | |
CAGGCAGTTCAGGCTCCTGT+AGG | + | Chr5:108355945-108355964 | None:intergenic | 60.0% | |
CGTATCACCACCGCCGTGAT+CGG | + | Chr5:108355914-108355933 | None:intergenic | 60.0% | |
CTCGGTCAAGATCGGAGGAG+AGG | - | Chr5:108356117-108356136 | MsG0580030215.01.T01:CDS | 60.0% | |
CTCTGGATTCCGCTGTTGCC+GGG | + | Chr5:108356176-108356195 | None:intergenic | 60.0% | |
TACACTCCGGAACTGGTCCG+CGG | + | Chr5:108356462-108356481 | None:intergenic | 60.0% | |
GATGAGCCGCGGACCAGTTC+CGG | - | Chr5:108356453-108356472 | MsG0580030215.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 108355691 | 108356725 | 108355691 | ID=MsG0580030215.01;Name=MsG0580030215.01 |
Chr5 | mRNA | 108355691 | 108356725 | 108355691 | ID=MsG0580030215.01.T01;Parent=MsG0580030215.01;Name=MsG0580030215.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|344 |
Chr5 | exon | 108355691 | 108356725 | 108355691 | ID=MsG0580030215.01.T01:exon:17724;Parent=MsG0580030215.01.T01 |
Chr5 | CDS | 108355691 | 108356725 | 108355691 | ID=MsG0580030215.01.T01:cds;Parent=MsG0580030215.01.T01 |
Gene Sequence |
Protein sequence |