AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011964.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011964.01.T01 MTR_3g011120 87.812 361 44 0 3 363 1 361 0.0 665
MsG0380011964.01.T01 MTR_8g467670 53.867 362 162 3 3 362 1 359 4.51e-129 379
MsG0380011964.01.T01 MTR_5g024260 56.331 387 135 13 1 360 5 384 1.29e-128 379
MsG0380011964.01.T01 MTR_2g066200 50.909 385 172 10 3 374 1 381 9.13e-116 345
MsG0380011964.01.T01 MTR_2g066170 51.351 370 168 8 3 363 1 367 5.71e-115 343
MsG0380011964.01.T01 MTR_1g098180 48.942 378 143 7 3 362 1 346 1.55e-108 325
MsG0380011964.01.T01 MTR_8g464770 46.648 358 183 5 13 365 9 363 1.39e-105 318
MsG0380011964.01.T01 MTR_2g034700 49.462 372 160 9 3 362 1 356 2.93e-104 315
MsG0380011964.01.T01 MTR_8g064890 49.606 381 158 12 3 362 1 368 1.80e-103 313
MsG0380011964.01.T01 MTR_8g039500 50.140 357 159 9 3 351 1 346 2.44e-102 309
MsG0380011964.01.T01 MTR_8g063440 46.409 362 171 8 13 360 9 361 4.14e-100 305
MsG0380011964.01.T01 MTR_0129s0070 47.074 376 173 13 6 362 8 376 2.11e-98 301
MsG0380011964.01.T01 MTR_0129s0120 46.467 368 174 11 13 362 14 376 1.43e-95 293
MsG0380011964.01.T01 MTR_2g021770 43.445 389 180 15 7 361 4 386 3.14e-95 293
MsG0380011964.01.T01 MTR_2g066150 45.736 387 161 14 3 374 1 353 1.51e-94 290
MsG0380011964.01.T01 MTR_0129s0050 44.332 397 175 14 3 362 1 388 4.65e-94 290
MsG0380011964.01.T01 MTR_2g065840 46.111 360 175 8 15 360 11 365 7.06e-93 286
MsG0380011964.01.T01 MTR_2g065860 44.474 380 186 11 13 374 9 381 5.26e-92 284
MsG0380011964.01.T01 MTR_6g086825 47.105 380 165 14 11 360 65 438 5.69e-92 286
MsG0380011964.01.T01 MTR_4g028680 43.961 414 194 16 1 389 1 401 6.91e-90 279
MsG0380011964.01.T01 MTR_8g036970 45.634 355 137 7 20 366 2 308 8.76e-90 278
MsG0380011964.01.T01 MTR_2g022000 42.184 403 182 13 2 362 4 397 1.03e-89 280
MsG0380011964.01.T01 MTR_4g028750 43.250 400 193 15 1 373 1 393 2.03e-89 278
MsG0380011964.01.T01 MTR_0831s0010 44.205 371 174 11 9 360 43 399 3.15e-89 278
MsG0380011964.01.T01 MTR_0054s0090 44.619 381 170 14 14 362 15 386 2.59e-88 275
MsG0380011964.01.T01 MTR_7g017040 42.432 403 196 13 1 380 2 391 2.61e-88 275
MsG0380011964.01.T01 MTR_0054s0100 43.684 380 177 12 14 362 15 388 4.40e-88 275
MsG0380011964.01.T01 MTR_2g038680 42.078 385 183 10 13 363 13 391 5.45e-88 274
MsG0380011964.01.T01 MTR_8g064790 44.872 390 151 13 3 381 1 337 6.36e-88 272
MsG0380011964.01.T01 MTR_4g028510 44.330 388 180 15 1 360 1 380 7.40e-88 276
MsG0380011964.01.T01 MTR_4g028660 41.860 387 188 13 1 360 1 377 1.16e-87 273
MsG0380011964.01.T01 MTR_4g027450 41.860 387 188 13 1 360 1 377 1.16e-87 273
MsG0380011964.01.T01 MTR_2g021800 40.686 408 199 12 13 381 13 416 1.30e-87 274
MsG0380011964.01.T01 MTR_5g097330 42.092 392 187 11 1 362 1 382 4.00e-87 272
MsG0380011964.01.T01 MTR_0134s0060 42.893 394 182 12 6 361 3 391 4.35e-87 272
MsG0380011964.01.T01 MTR_2g021950 40.355 394 212 11 1 374 1 391 1.50e-86 270
MsG0380011964.01.T01 MTR_6g079770 42.526 388 179 12 14 362 15 397 5.29e-86 270
MsG0380011964.01.T01 MTR_5g043605 45.799 369 121 12 13 367 22 325 7.36e-86 268
MsG0380011964.01.T01 MTR_5g096630 43.500 400 180 14 1 363 5 395 9.75e-86 269
MsG0380011964.01.T01 MTR_4g102410 43.351 376 184 11 14 363 59 431 2.92e-85 268
MsG0380011964.01.T01 MTR_4g055820 43.802 363 171 10 3 337 1 358 4.23e-85 265
MsG0380011964.01.T01 MTR_5g097220 41.849 411 190 15 3 374 1 401 1.29e-84 266
MsG0380011964.01.T01 MTR_1g007410 43.445 389 181 15 15 370 21 403 2.51e-84 265
MsG0380011964.01.T01 MTR_6g080680 42.078 385 183 12 6 365 9 378 1.64e-83 262
MsG0380011964.01.T01 MTR_8g012090 43.539 356 150 8 13 351 13 334 2.39e-83 260
MsG0380011964.01.T01 MTR_8g033140 43.176 403 178 15 2 362 4 397 9.06e-83 261
MsG0380011964.01.T01 MTR_1g007450 40.609 394 199 14 14 379 10 396 1.04e-82 261
MsG0380011964.01.T01 MTR_5g037680 41.489 376 184 11 12 363 4 367 3.74e-82 261
MsG0380011964.01.T01 MTR_5g096910 41.495 388 189 12 1 364 1 374 3.69e-81 256
MsG0380011964.01.T01 MTR_8g046310 45.013 371 180 13 3 362 1 358 5.33e-81 255
MsG0380011964.01.T01 MTR_2g104340 39.706 408 202 13 3 382 1 392 1.35e-80 255
MsG0380011964.01.T01 MTR_4g117550 42.149 363 174 9 13 362 14 353 1.42e-80 254
MsG0380011964.01.T01 MTR_7g017130 40.212 378 205 9 2 363 6 378 1.60e-80 254
MsG0380011964.01.T01 MTR_5g059430 40.561 392 189 13 7 359 17 403 1.69e-80 256
MsG0380011964.01.T01 MTR_5g097350 43.213 361 179 13 23 367 23 373 1.89e-80 254
MsG0380011964.01.T01 MTR_6g079810 40.933 386 189 10 9 361 63 442 3.75e-80 256
MsG0380011964.01.T01 MTR_7g069550 38.693 398 208 10 3 372 1 390 8.97e-80 253
MsG0380011964.01.T01 MTR_5g069390 40.415 386 195 13 8 363 18 398 9.92e-80 256
MsG0380011964.01.T01 MTR_7g017170 40.107 374 203 9 2 359 6 374 2.81e-79 252
MsG0380011964.01.T01 MTR_5g097680 39.858 424 190 13 6 374 8 421 6.56e-79 251
MsG0380011964.01.T01 MTR_1g053510 41.457 398 188 12 4 366 3 390 9.14e-79 251
MsG0380011964.01.T01 MTR_4g014370 40.695 403 182 16 6 364 2 391 1.34e-78 250
MsG0380011964.01.T01 MTR_8g063330 42.938 354 177 9 3 337 1 348 1.56e-78 252
MsG0380011964.01.T01 MTR_6g461660 42.588 371 182 11 13 360 16 378 2.69e-78 249
MsG0380011964.01.T01 MTR_7g079640 40.642 374 187 11 15 372 12 366 3.52e-77 246
MsG0380011964.01.T01 MTR_1g050308 41.096 365 149 9 2 359 22 327 4.61e-76 241
MsG0380011964.01.T01 MTR_8g046200 41.063 414 180 14 1 362 1 402 1.29e-75 243
MsG0380011964.01.T01 MTR_6g090180 41.237 388 188 13 8 360 34 416 3.58e-74 239
MsG0380011964.01.T01 MTR_8g018110 41.026 390 187 12 3 362 1 377 4.59e-74 238
MsG0380011964.01.T01 MTR_4g130330 39.005 382 184 14 12 360 3 368 6.91e-74 237
MsG0380011964.01.T01 MTR_4g007940 45.062 324 144 10 67 362 5 322 7.14e-74 236
MsG0380011964.01.T01 MTR_8g032980 39.202 426 195 12 1 374 1 414 1.88e-73 237
MsG0380011964.01.T01 MTR_6g478230 40.051 392 181 13 6 363 17 388 2.86e-73 236
MsG0380011964.01.T01 MTR_5g092850 38.404 401 201 13 11 380 11 396 4.34e-73 236
MsG0380011964.01.T01 MTR_5g074850 39.120 409 201 15 3 376 23 418 2.98e-72 245
MsG0380011964.01.T01 MTR_2g104280 38.741 413 211 12 3 381 1 405 5.41e-72 233
MsG0380011964.01.T01 MTR_2g064950 37.755 392 202 12 9 372 4 381 6.97e-72 232
MsG0380011964.01.T01 MTR_8g046220 39.750 400 187 12 3 362 1 386 2.19e-71 231
MsG0380011964.01.T01 MTR_8g041270 38.462 416 208 14 1 382 1 402 5.05e-71 230
MsG0380011964.01.T01 MTR_8g033110 40.786 407 182 17 3 362 1 395 5.25e-70 228
MsG0380011964.01.T01 MTR_8g033090 38.500 400 198 12 3 362 1 392 8.60e-70 227
MsG0380011964.01.T01 MTR_6g090250 37.745 408 197 14 6 362 3 404 1.52e-69 227
MsG0380011964.01.T01 MTR_8g063370 38.381 383 209 13 2 369 10 380 1.77e-69 226
MsG0380011964.01.T01 MTR_8g013000 39.678 373 181 14 14 360 8 362 1.07e-68 224
MsG0380011964.01.T01 MTR_5g075370 38.860 386 190 13 13 362 5 380 1.66e-68 233
MsG0380011964.01.T01 MTR_7g016930 41.509 318 150 10 9 313 10 304 3.23e-68 221
MsG0380011964.01.T01 MTR_7g111700 38.480 421 170 16 3 389 1 366 9.85e-68 221
MsG0380011964.01.T01 MTR_5g091140 41.388 389 174 17 3 363 36 398 1.45e-67 222
MsG0380011964.01.T01 MTR_5g072060 38.503 374 183 10 14 363 4 354 1.88e-67 227
MsG0380011964.01.T01 MTR_1g007430 40.533 338 157 10 27 340 7 324 2.43e-67 218
MsG0380011964.01.T01 MTR_1g050312 45.775 284 118 9 87 360 16 273 3.86e-66 214
MsG0380011964.01.T01 MTR_5g068490 47.018 285 123 12 96 374 8 270 6.83e-65 210
MsG0380011964.01.T01 MTR_8g063350 36.061 391 171 13 1 369 1 334 1.77e-63 209
MsG0380011964.01.T01 MTR_5g096900 42.138 318 146 10 13 305 9 313 5.41e-63 207
MsG0380011964.01.T01 MTR_5g022850 36.132 393 180 11 10 381 11 353 1.02e-61 204
MsG0380011964.01.T01 MTR_8g063310 36.772 378 197 17 5 357 12 372 4.00e-61 204
MsG0380011964.01.T01 MTR_6g078010 40.299 335 155 14 53 362 1 315 9.06e-59 197
MsG0380011964.01.T01 MTR_5g074800 37.730 326 174 9 55 357 1 320 1.68e-58 196
MsG0380011964.01.T01 MTR_5g092860 36.413 368 171 14 34 367 20 358 7.37e-57 192
MsG0380011964.01.T01 MTR_5g086590 44.215 242 115 7 131 363 7 237 1.14e-56 187
MsG0380011964.01.T01 MTR_5g064700 37.047 359 166 16 55 362 1 350 4.58e-52 179
MsG0380011964.01.T01 MTR_7g104710 40.461 304 131 13 13 297 14 286 1.82e-51 176
MsG0380011964.01.T01 MTR_5g094350 38.832 291 122 10 15 273 12 278 2.85e-50 172
MsG0380011964.01.T01 MTR_7g023800 35.942 345 157 13 55 375 1 305 2.57e-49 171
MsG0380011964.01.T01 MTR_8g073570 54.118 170 67 7 14 179 8 170 2.59e-49 166
MsG0380011964.01.T01 MTR_6g079790 37.288 295 139 11 95 360 10 287 6.20e-47 164
MsG0380011964.01.T01 MTR_5g076490 38.710 341 150 14 53 361 1 314 1.76e-46 164
MsG0380011964.01.T01 MTR_6g004450 41.593 226 115 7 149 361 27 248 2.61e-46 161
MsG0380011964.01.T01 MTR_8g033000 36.538 364 167 15 53 367 1 349 4.55e-46 164
MsG0380011964.01.T01 MTR_6g070880 42.017 238 105 9 15 226 31 261 2.65e-45 159
MsG0380011964.01.T01 MTR_6g071420 42.017 238 105 9 15 226 31 261 2.65e-45 159
MsG0380011964.01.T01 MTR_2g021920 38.976 254 119 6 145 362 2 255 9.77e-45 157
MsG0380011964.01.T01 MTR_6g087620 34.354 294 145 9 87 360 1 266 1.13e-44 157
MsG0380011964.01.T01 MTR_4g014370 32.514 366 181 10 6 364 13 319 2.00e-44 158
MsG0380011964.01.T01 MTR_5g097850 38.929 280 107 9 110 374 8 238 4.26e-44 155
MsG0380011964.01.T01 MTR_1g076810 43.089 246 121 11 1 235 4 241 1.41e-43 162
MsG0380011964.01.T01 MTR_4g016000 45.000 200 90 8 142 332 2 190 1.43e-43 152
MsG0380011964.01.T01 MTR_5g097820 38.372 258 125 11 18 254 25 269 3.04e-43 153
MsG0380011964.01.T01 MTR_5g023970 47.953 171 81 5 200 363 7 176 9.00e-43 150
MsG0380011964.01.T01 MTR_3g047580 54.000 150 45 2 3 151 1 127 5.88e-42 145
MsG0380011964.01.T01 MTR_2g104260 36.786 280 146 10 3 258 1 273 1.18e-39 144
MsG0380011964.01.T01 MTR_6g465360 41.176 221 98 8 14 206 60 276 1.83e-38 141
MsG0380011964.01.T01 MTR_3g018750 39.149 235 114 7 167 374 2 234 1.93e-36 134
MsG0380011964.01.T01 MTR_5g037190 34.926 272 135 8 1 254 1 248 7.20e-36 133
MsG0380011964.01.T01 MTR_5g098950 37.198 207 103 4 139 340 90 274 1.31e-35 133
MsG0380011964.01.T01 MTR_1g115205 38.866 247 91 9 16 241 29 236 2.24e-35 132
MsG0380011964.01.T01 MTR_6g090260 43.195 169 85 4 204 362 75 242 2.97e-35 132
MsG0380011964.01.T01 MTR_6g090260 41.441 111 50 3 2 112 6 101 1.44e-15 77.0
MsG0380011964.01.T01 MTR_5g097650 48.322 149 60 6 9 154 15 149 1.31e-34 127
MsG0380011964.01.T01 MTR_6g009350 39.683 189 100 6 169 345 9 195 8.77e-34 125
MsG0380011964.01.T01 MTR_7g019250 38.938 226 105 6 150 359 205 413 8.99e-34 132
MsG0380011964.01.T01 MTR_5g096070 46.199 171 57 7 10 176 20 159 2.99e-33 123
MsG0380011964.01.T01 MTR_3g019290 39.450 218 82 7 3 210 1 178 8.55e-33 122
MsG0380011964.01.T01 MTR_5g097540 43.571 140 75 2 203 340 96 233 2.12e-29 117
MsG0380011964.01.T01 MTR_8g035690 35.484 248 121 9 150 362 40 283 2.90e-28 114
MsG0380011964.01.T01 MTR_7g101200 37.619 210 105 8 137 339 38 228 1.10e-26 107
MsG0380011964.01.T01 MTR_1g047080 32.390 318 150 13 53 361 1 262 1.51e-26 108
MsG0380011964.01.T01 MTR_7g017150 37.824 193 105 6 203 387 81 266 5.98e-25 103
MsG0380011964.01.T01 MTR_5g091150 33.884 242 97 9 66 303 17 199 7.38e-25 102
MsG0380011964.01.T01 MTR_7g017120 37.436 195 107 6 203 389 80 267 9.23e-25 103
MsG0380011964.01.T01 MTR_2g021150 31.290 310 188 12 15 317 13 304 2.19e-24 104
MsG0380011964.01.T01 MTR_5g096920 40.000 135 74 3 234 363 1 133 2.46e-24 99.0
MsG0380011964.01.T01 MTR_2g022020 50.000 94 47 0 268 361 8 101 6.24e-24 96.7
MsG0380011964.01.T01 MTR_5g066420 42.063 126 67 2 248 367 21 146 7.18e-24 97.4
MsG0380011964.01.T01 MTR_1g068835 28.125 352 203 15 19 349 7 329 1.62e-23 102
MsG0380011964.01.T01 MTR_6g079730 45.763 118 58 2 250 362 14 130 3.56e-23 95.5
MsG0380011964.01.T01 MTR_3g047540 51.852 81 39 0 201 281 3 83 2.57e-22 91.3
MsG0380011964.01.T01 MTR_3g030620 36.025 161 87 4 220 365 5 164 6.15e-22 93.2
MsG0380011964.01.T01 MTR_4g133170 26.099 364 217 18 19 361 7 339 5.38e-21 94.7
MsG0380011964.01.T01 MTR_3g013740 28.743 334 200 16 1 317 30 342 2.58e-20 93.2
MsG0380011964.01.T01 MTR_1g050305 50.515 97 43 2 283 374 21 117 3.81e-20 87.0
MsG0380011964.01.T01 MTR_3g014540 28.395 324 173 16 16 317 29 315 1.52e-19 90.5
MsG0380011964.01.T01 MTR_2g025420 27.273 352 200 16 11 327 1 331 1.85e-19 90.5
MsG0380011964.01.T01 MTR_2g426060 28.788 330 178 17 19 317 9 312 2.08e-19 90.5
MsG0380011964.01.T01 MTR_2g426020 26.126 333 194 12 11 317 1 307 5.49e-19 89.0
MsG0380011964.01.T01 MTR_5g036250 39.831 118 71 0 278 395 8 125 9.25e-19 84.3
MsG0380011964.01.T01 MTR_2g028160 26.586 331 190 13 19 317 8 317 1.69e-18 87.8
MsG0380011964.01.T01 MTR_3g083010 25.723 346 204 13 19 331 9 334 1.97e-18 87.4
MsG0380011964.01.T01 MTR_2g425980 28.963 328 181 12 19 317 8 312 2.06e-18 87.4
MsG0380011964.01.T01 MTR_8g041440 47.826 92 31 1 13 104 12 86 2.07e-18 81.3
MsG0380011964.01.T01 MTR_5g057790 25.796 314 186 13 19 317 49 330 2.39e-18 87.0
MsG0380011964.01.T01 MTR_2g041060 45.238 84 46 0 364 447 9 92 6.38e-18 82.4
MsG0380011964.01.T01 MTR_6g087660 58.108 74 29 1 4 75 6 79 6.78e-18 82.0
MsG0380011964.01.T01 MTR_0667s0010 27.003 337 200 16 11 325 1 313 7.29e-18 85.9
MsG0380011964.01.T01 MTR_1g097330 26.415 371 231 15 18 373 18 361 8.67e-18 85.5
MsG0380011964.01.T01 MTR_4g055060 26.519 362 209 13 19 352 33 365 9.04e-18 85.1
MsG0380011964.01.T01 MTR_2g046900 27.532 316 204 13 15 323 27 324 9.16e-18 85.1
MsG0380011964.01.T01 MTR_3g014570 28.617 311 183 13 19 317 32 315 9.39e-18 85.1
MsG0380011964.01.T01 MTR_1g050542 26.613 372 224 15 18 375 60 396 9.41e-18 85.5
MsG0380011964.01.T01 MTR_5g086780 42.718 103 54 1 261 358 126 228 9.79e-18 82.4
MsG0380011964.01.T01 MTR_5g086780 72.093 43 12 0 14 56 14 56 9.77e-14 70.9
MsG0380011964.01.T01 MTR_5g097660 50.602 83 40 1 278 359 15 97 1.04e-17 79.3
MsG0380011964.01.T01 MTR_2g029990 25.816 337 210 15 19 344 54 361 1.22e-17 85.1
MsG0380011964.01.T01 MTR_2g046800 27.607 326 190 13 18 314 16 324 2.16e-17 84.3
MsG0380011964.01.T01 MTR_2g031640 26.257 358 204 18 19 349 9 333 2.20e-17 84.0
MsG0380011964.01.T01 MTR_0064s0160 26.257 358 231 15 15 348 41 389 2.48e-17 84.3
MsG0380011964.01.T01 MTR_2g021050 28.440 327 182 16 19 330 8 297 2.61e-17 84.0
MsG0380011964.01.T01 MTR_1g068875 29.664 327 178 15 19 327 7 299 2.93e-17 83.6
MsG0380011964.01.T01 MTR_6g462100 44.444 81 45 0 364 444 141 221 2.94e-17 80.9
MsG0380011964.01.T01 MTR_3g034130 26.558 369 199 19 15 348 8 339 3.63e-17 83.2
MsG0380011964.01.T01 MTR_3g013770 27.273 363 176 17 19 344 36 347 3.88e-17 83.2
MsG0380011964.01.T01 MTR_8g101580 25.407 307 182 11 24 315 54 328 5.54e-17 82.8
MsG0380011964.01.T01 MTR_1g097560 25.886 367 222 15 7 359 27 357 6.68e-17 82.4
MsG0380011964.01.T01 MTR_3g006670 27.168 346 205 14 19 348 52 366 7.26e-17 82.8
MsG0380011964.01.T01 MTR_7g070440 25.505 396 199 16 15 365 6 350 8.37e-17 82.0
MsG0380011964.01.T01 MTR_2g046830 27.796 313 182 15 15 314 24 305 8.62e-17 82.4
MsG0380011964.01.T01 MTR_5g022420 25.680 331 210 12 15 341 26 324 1.10e-16 82.0
MsG0380011964.01.T01 MTR_4g024890 27.134 328 183 14 18 318 12 310 1.72e-16 81.3
MsG0380011964.01.T01 MTR_0115s0020 26.494 385 229 19 19 371 13 375 2.21e-16 81.3
MsG0380011964.01.T01 MTR_4g019990 25.948 343 191 16 11 317 1 316 2.98e-16 80.5
MsG0380011964.01.T01 MTR_2g031720 25.606 371 210 20 11 349 1 337 3.46e-16 80.5
MsG0380011964.01.T01 MTR_2g055970 27.523 327 185 15 6 314 201 493 3.56e-16 81.3
MsG0380011964.01.T01 MTR_4g070550 27.515 338 189 18 19 324 8 321 3.65e-16 80.5
MsG0380011964.01.T01 MTR_0707s0020 24.654 434 250 16 15 387 25 442 7.41e-16 79.7
MsG0380011964.01.T01 MTR_0044s0300 25.937 347 203 16 19 349 41 349 7.67e-16 79.3
MsG0380011964.01.T01 MTR_1g094210 27.640 322 171 17 12 315 53 330 8.96e-16 79.3
MsG0380011964.01.T01 MTR_1g094210 27.673 318 168 17 16 315 57 330 1.11e-15 79.0
MsG0380011964.01.T01 MTR_2g024100 27.184 309 179 15 31 315 22 308 1.40e-15 78.6
MsG0380011964.01.T01 MTR_3g007410 29.231 325 177 18 24 325 60 354 1.42e-15 78.6
MsG0380011964.01.T01 MTR_2g461450 25.613 367 195 17 16 347 18 341 1.50e-15 78.2
MsG0380011964.01.T01 MTR_3g006570 22.343 367 242 14 19 373 24 359 1.56e-15 78.6
MsG0380011964.01.T01 MTR_3g007360 28.660 321 184 16 24 325 60 354 1.58e-15 78.6
MsG0380011964.01.T01 MTR_4g094365 26.549 339 200 17 15 335 7 314 2.68e-15 77.4
MsG0380011964.01.T01 MTR_8g467140 26.837 313 187 12 15 314 31 314 4.53e-15 76.6
MsG0380011964.01.T01 MTR_2g426090 23.714 350 211 12 11 331 1 323 5.18e-15 77.0
MsG0380011964.01.T01 MTR_1g054575 28.710 310 177 15 16 314 52 328 6.28e-15 77.4
MsG0380011964.01.T01 MTR_4g023090 23.393 389 249 14 1 374 1 355 8.47e-15 76.3
MsG0380011964.01.T01 MTR_4g061340 26.433 314 189 13 19 317 29 315 1.09e-14 75.9
MsG0380011964.01.T01 MTR_1g009110 24.044 366 237 16 3 348 1 345 1.13e-14 75.9
MsG0380011964.01.T01 MTR_2g021252 25.610 328 208 14 19 344 50 343 1.15e-14 75.9
MsG0380011964.01.T01 MTR_2g021155 28.024 339 199 20 19 344 39 345 1.24e-14 77.0
MsG0380011964.01.T01 MTR_7g007300 28.431 306 173 14 19 314 106 375 1.27e-14 75.9
MsG0380011964.01.T01 MTR_5g011200 24.478 335 217 15 19 343 20 328 2.75e-14 74.7
MsG0380011964.01.T01 MTR_7g055870 24.425 348 209 13 16 321 13 348 3.21e-14 74.7
MsG0380011964.01.T01 MTR_5g057643 27.536 207 116 8 19 217 49 229 3.34e-14 73.2
MsG0380011964.01.T01 MTR_7g407070 25.846 325 193 11 19 317 35 337 4.41e-14 73.9
MsG0380011964.01.T01 MTR_8g062660 24.274 379 204 17 19 363 25 354 5.40e-14 74.7
MsG0380011964.01.T01 MTR_3g024040 28.667 300 176 14 24 318 39 305 7.96e-14 73.2
MsG0380011964.01.T01 MTR_4g023080 24.286 350 205 14 15 345 8 316 8.88e-14 72.8
MsG0380011964.01.T01 MTR_0285s0020 55.556 63 28 0 391 453 84 146 9.21e-14 69.7
MsG0380011964.01.T01 MTR_1g055135 26.979 341 201 18 15 335 12 324 1.12e-13 72.8
MsG0380011964.01.T01 MTR_6g053260 23.214 336 200 14 4 317 325 624 1.37e-13 73.6
MsG0380011964.01.T01 MTR_2g021190 25.000 356 228 15 3 344 1 331 1.47e-13 72.4
MsG0380011964.01.T01 MTR_4g122850 24.507 355 227 13 27 360 12 346 1.57e-13 72.4
MsG0380011964.01.T01 MTR_4g117770 29.108 213 120 9 8 217 3 187 1.73e-13 72.0
MsG0380011964.01.T01 MTR_4g117810 29.108 213 120 9 8 217 3 187 1.73e-13 72.0
MsG0380011964.01.T01 MTR_5g057040 26.695 236 125 10 19 240 49 250 1.77e-13 73.2
MsG0380011964.01.T01 MTR_6g053240 25.559 313 196 13 19 317 31 320 2.22e-13 72.0
MsG0380011964.01.T01 MTR_1g097490 25.641 351 236 11 5 352 38 366 2.44e-13 71.6
MsG0380011964.01.T01 MTR_8g099460 25.836 329 202 10 19 329 8 312 2.60e-13 71.6
MsG0380011964.01.T01 MTR_3g009310 24.471 331 207 14 19 336 45 345 3.37e-13 71.2
MsG0380011964.01.T01 MTR_5g010560 24.444 360 195 14 24 326 52 391 3.75e-13 71.6
MsG0380011964.01.T01 MTR_2g031680 24.100 361 221 15 11 349 1 330 4.03e-13 71.2
MsG0380011964.01.T01 MTR_5g010550 24.339 378 206 16 24 342 66 422 4.10e-13 71.6
MsG0380011964.01.T01 MTR_7g055930 25.634 355 196 16 16 321 13 348 4.48e-13 71.2
MsG0380011964.01.T01 MTR_2g021210 27.729 339 193 18 1 325 68 368 4.51e-13 71.2
MsG0380011964.01.T01 MTR_5g010550 24.339 378 206 16 24 342 52 408 4.82e-13 71.2
MsG0380011964.01.T01 MTR_1g054725 24.116 311 201 12 19 317 23 310 6.48e-13 70.5
MsG0380011964.01.T01 MTR_3g007270 26.852 324 178 14 19 315 50 341 7.88e-13 70.5
MsG0380011964.01.T01 MTR_3g007430 30.244 205 108 12 24 217 51 231 1.00e-12 69.7
MsG0380011964.01.T01 MTR_5g096710 24.198 405 246 20 18 390 25 400 1.13e-12 69.7
MsG0380011964.01.T01 MTR_5g070080 26.140 329 187 13 15 313 9 311 1.42e-12 69.3
MsG0380011964.01.T01 MTR_3g011060 25.857 321 189 11 19 317 31 324 1.61e-12 69.3
MsG0380011964.01.T01 MTR_3g034160 25.309 324 199 15 9 313 2 301 1.89e-12 68.9
MsG0380011964.01.T01 MTR_4g031770 25.163 306 193 14 19 314 7 286 2.42e-12 68.6
MsG0380011964.01.T01 MTR_2g026010 26.686 341 196 21 35 349 23 335 2.96e-12 68.6
MsG0380011964.01.T01 MTR_7g055850 26.423 246 144 8 16 250 13 232 3.46e-12 67.4
MsG0380011964.01.T01 MTR_3g097190 51.852 54 26 0 302 355 28 81 4.56e-12 65.1
MsG0380011964.01.T01 MTR_5g027370 23.248 314 208 11 20 315 33 331 5.15e-12 67.8
MsG0380011964.01.T01 MTR_5g027330 23.248 314 208 11 20 315 44 342 5.27e-12 67.8
MsG0380011964.01.T01 MTR_5g048160 24.675 385 223 17 19 360 7 367 5.70e-12 67.4
MsG0380011964.01.T01 MTR_0128s0020 24.051 316 204 11 18 315 20 317 5.77e-12 67.4
MsG0380011964.01.T01 MTR_6g016285 26.630 368 187 18 1 318 1 335 6.21e-12 67.8
MsG0380011964.01.T01 MTR_5g070130 30.698 215 126 8 6 220 3 194 9.59e-12 67.0
MsG0380011964.01.T01 MTR_6g048120 25.633 316 194 16 19 317 39 330 1.08e-11 66.6
MsG0380011964.01.T01 MTR_4g023070 26.471 306 188 14 19 313 6 285 1.13e-11 66.6
MsG0380011964.01.T01 MTR_4g023120 27.541 305 182 16 19 311 6 283 1.19e-11 66.6
MsG0380011964.01.T01 MTR_1g053515 54.098 61 28 0 377 437 2 62 1.32e-11 62.0
MsG0380011964.01.T01 MTR_6g086920 25.069 363 200 14 15 318 37 386 1.33e-11 67.0
MsG0380011964.01.T01 MTR_7g061050 24.928 345 197 17 1 317 1 311 1.71e-11 66.2
MsG0380011964.01.T01 MTR_3g011100 25.000 344 180 17 19 330 238 535 2.17e-11 66.2
MsG0380011964.01.T01 MTR_4g021785 23.631 347 212 12 15 345 8 317 2.68e-11 65.1
MsG0380011964.01.T01 MTR_1g041440 48.000 75 39 0 363 437 24 98 2.71e-11 62.0
MsG0380011964.01.T01 MTR_3g058470 25.243 309 176 11 19 317 40 303 2.74e-11 65.5
MsG0380011964.01.T01 MTR_8g433040 31.250 208 112 9 15 217 17 198 2.96e-11 65.1
MsG0380011964.01.T01 MTR_8g032380 31.250 208 112 9 15 217 17 198 2.96e-11 65.1
MsG0380011964.01.T01 MTR_5g021860 23.615 343 204 9 24 318 38 370 3.01e-11 65.9
MsG0380011964.01.T01 MTR_7g056003 24.348 345 191 16 11 317 10 322 3.13e-11 65.5
MsG0380011964.01.T01 MTR_4g107820 23.988 346 226 14 16 349 36 356 3.30e-11 65.1
MsG0380011964.01.T01 MTR_4g107780 23.988 346 226 14 16 349 36 356 3.30e-11 65.1
MsG0380011964.01.T01 MTR_5g021860 23.615 343 204 9 24 318 38 370 3.68e-11 65.5
MsG0380011964.01.T01 MTR_4g107820 23.988 346 226 14 16 349 36 356 3.79e-11 65.1
MsG0380011964.01.T01 MTR_4g107780 23.988 346 226 14 16 349 36 356 4.14e-11 65.1
MsG0380011964.01.T01 MTR_4g011660 24.847 326 211 11 18 315 21 340 7.47e-11 64.3
MsG0380011964.01.T01 MTR_6g046320 24.324 370 207 15 24 340 47 396 7.68e-11 64.3
MsG0380011964.01.T01 MTR_4g023190 26.496 351 195 16 7 335 1 310 8.42e-11 63.9
MsG0380011964.01.T01 MTR_2g021860 37.500 96 47 4 100 187 14 104 9.23e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011964.01.T01 AT3G16210 22.067 358 233 12 13 366 2 317 1.02e-14 75.9
MsG0380011964.01.T01 AT3G23880 23.636 330 228 12 3 327 1 311 5.05e-13 70.9

Find 98 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGATGGTTGGAGCTTT+AGG 0.110511 3:-8543952 None:intergenic
TTTAGCTATGATTAAGTTTA+TGG 0.119991 3:-8543836 None:intergenic
TTCATTCCAAATTTCAATTA+TGG 0.121011 3:+8540842 MsG0380011964.01.T01:CDS
TGGAATGTTTATTTACTTTC+TGG 0.146395 3:+8540210 MsG0380011964.01.T01:CDS
GTTCACCCATAATTGAAATT+TGG 0.163042 3:-8540848 None:intergenic
CTTTGATGGTTGGAGCTTTA+GGG 0.167348 3:-8543951 None:intergenic
GTTAGCTTGGTTGTGTTAAA+TGG 0.210921 3:+8540783 MsG0380011964.01.T01:CDS
CCTTCATTACCTATTAAAAT+AGG 0.233343 3:+8540270 MsG0380011964.01.T01:CDS
GGGTTTAATGTTAACCTTAC+AGG 0.233955 3:-8543929 None:intergenic
CAATTTAATCTTCATGGATT+TGG 0.237063 3:+8540447 MsG0380011964.01.T01:CDS
AACACTCAATTTAATCTTCA+TGG 0.248219 3:+8540441 MsG0380011964.01.T01:CDS
CGGAACATGTTTATGAAATC+AGG 0.256615 3:-8540105 None:intergenic
ATATTAGGCTCTGCTATTAA+TGG 0.290151 3:+8540309 MsG0380011964.01.T01:CDS
ACAACCAAGTACTTCCTCTA+AGG 0.306435 3:-8540754 None:intergenic
TATTACACCTTCACCCTTAG+AGG 0.306930 3:+8540740 MsG0380011964.01.T01:CDS
CTAACCTTCTTCTTGATTGT+TGG 0.312804 3:-8539970 None:intergenic
TCATTCCAAATTTCAATTAT+GGG 0.314594 3:+8540843 MsG0380011964.01.T01:CDS
GATAATCAGGACCCGATAAA+TGG 0.319480 3:-8540185 None:intergenic
CAAATACAAGAGTTGCATTA+TGG 0.320781 3:+8540358 MsG0380011964.01.T01:CDS
TTAAATTGAGTGTTAACATT+TGG 0.324394 3:-8540432 None:intergenic
ATCGTACAACGGATGAGATT+TGG 0.346071 3:-8540142 None:intergenic
GGCTATAATATGTAATTATA+AGG 0.347240 3:+8540812 MsG0380011964.01.T01:CDS
AACAACTGATGAGGCATATA+TGG 0.347393 3:+8540686 MsG0380011964.01.T01:CDS
TCTCATTCTAAACCATTTAT+CGG 0.351588 3:+8540173 MsG0380011964.01.T01:CDS
AACCTCTTGATAGATTTAAC+AGG 0.381338 3:-8540042 None:intergenic
TATCGGGTCCTGATTATCAT+TGG 0.382947 3:+8540190 MsG0380011964.01.T01:CDS
GGACCAAATCACTTCTTTGA+TGG 0.383937 3:-8543965 None:intergenic
TAAACATTCCAATGATAATC+AGG 0.385725 3:-8540198 None:intergenic
TAATAAAGACCATGATTTGC+AGG 0.391351 3:-8540073 None:intergenic
CAACCATCAAAGAAGTGATT+TGG 0.395675 3:+8543962 MsG0380011964.01.T01:CDS
GGTCCCCTCCCTTGCCAACT+TGG 0.404277 3:+8543983 MsG0380011964.01.T01:CDS
ATTATGGAACCCTGCGACTC+AGG 0.410784 3:+8540374 MsG0380011964.01.T01:CDS
TTAGCTTGGTTGTGTTAAAT+GGG 0.411347 3:+8540784 MsG0380011964.01.T01:CDS
ATTTCAATTATGGGTGAACT+TGG 0.412136 3:+8540852 MsG0380011964.01.T01:CDS
TCCAATGCAGCTGCTTGTCT+TGG 0.420500 3:-8543807 None:intergenic
TGTTAACCTTACAGGCTTTG+AGG 0.423202 3:-8543921 None:intergenic
GGTTGTGTTAAATGGGTTTG+TGG 0.423441 3:+8540791 MsG0380011964.01.T01:CDS
CAGAAAAGAAAATGACGAAC+TGG 0.425427 3:+8540968 MsG0380011964.01.T01:CDS
TTTCTTGTGCCTGCAAATCA+TGG 0.426525 3:+8540064 MsG0380011964.01.T01:CDS
CAAATCACTTCTTTGATGGT+TGG 0.441500 3:-8543961 None:intergenic
ATTTGAGAATAAAATGAAAG+TGG 0.444150 3:+8540239 MsG0380011964.01.T01:CDS
GCCTTAACTTCCTGAGTCGC+AGG 0.444798 3:-8540384 None:intergenic
CCCTGCGACTCAGGAAGTTA+AGG 0.450830 3:+8540383 MsG0380011964.01.T01:CDS
TCCAAGACAAGCAGCTGCAT+TGG 0.458784 3:+8543806 MsG0380011964.01.T01:CDS
CTCATTCTAAACCATTTATC+GGG 0.463980 3:+8540174 MsG0380011964.01.T01:CDS
TTTAATGATAAACCTTGTAA+TGG 0.471037 3:+8540525 MsG0380011964.01.T01:CDS
TGGATAAAAGTTAACAAAGA+TGG 0.476202 3:+8544003 MsG0380011964.01.T01:CDS
TAGTAACCTCAAAGCCTGTA+AGG 0.479219 3:+8543915 MsG0380011964.01.T01:CDS
AGATTGGTGTCAAAGGAGAA+AGG 0.495606 3:+8541024 MsG0380011964.01.T01:CDS
TATCCAAGTTGGCAAGGGAG+GGG 0.495898 3:-8543986 None:intergenic
ACTGGAGTGACGGAGGAGAT+TGG 0.496486 3:+8541008 MsG0380011964.01.T01:CDS
ATTTGAATGAGATGTGTCAT+TGG 0.504229 3:+8540655 MsG0380011964.01.T01:CDS
TCCTATCGGAGCATGGAAGA+AGG 0.505642 3:+8540932 MsG0380011964.01.T01:CDS
AACTTGGTGTGAAGGAATCA+TGG 0.510687 3:+8540868 MsG0380011964.01.T01:CDS
GGCTCCAACAATCAAGAAGA+AGG 0.511450 3:+8539966 MsG0380011964.01.T01:CDS
TCACCCTTAGAGGAAGTACT+TGG 0.511839 3:+8540750 MsG0380011964.01.T01:CDS
TGATATGCCAACTCGCTACC+AGG 0.513053 3:+8540614 MsG0380011964.01.T01:CDS
ACACATAAGTATCAAAATCC+TGG 0.516871 3:-8540632 None:intergenic
CAGTCCATGGCTAGGAGGAA+TGG 0.526093 3:-8540406 None:intergenic
ATTTGGCTATGACCATGTTA+AGG 0.526509 3:+8540464 MsG0380011964.01.T01:CDS
TTATCCAAGTTGGCAAGGGA+GGG 0.533222 3:-8543987 None:intergenic
TTTGATGGTTGGAGCTTTAG+GGG 0.534779 3:-8543950 None:intergenic
AACTGCTAGAGGTGATATGT+TGG 0.536152 3:+8543888 MsG0380011964.01.T01:CDS
ATAGCTAAAGTCTCTAATGC+TGG 0.537707 3:+8543850 MsG0380011964.01.T01:CDS
TTCCTGTTAAATCTATCAAG+AGG 0.538916 3:+8540040 MsG0380011964.01.T01:CDS
TCTTGCATTGACAGTCCTAT+CGG 0.539884 3:+8540918 MsG0380011964.01.T01:CDS
CAACCAAGTACTTCCTCTAA+GGG 0.543316 3:-8540753 None:intergenic
CCCTTCTTCCATGCTCCGAT+AGG 0.544417 3:-8540933 None:intergenic
TTTATCCAAGTTGGCAAGGG+AGG 0.544557 3:-8543988 None:intergenic
TCAAGCTTCAGACCATTACA+AGG 0.545297 3:-8540537 None:intergenic
GGAACATGTTTATGAAATCA+GGG 0.545894 3:-8540104 None:intergenic
GAATGAGATGTGTCATTGGT+GGG 0.554189 3:+8540659 MsG0380011964.01.T01:CDS
CTTTATAGTCATCCTTAACA+TGG 0.560574 3:-8540476 None:intergenic
TGATTTAATTACTGGAGTGA+CGG 0.562456 3:+8540998 MsG0380011964.01.T01:CDS
ACGGAGGAGATTGGTGTCAA+AGG 0.570458 3:+8541017 MsG0380011964.01.T01:CDS
TTGATGGTTGGAGCTTTAGG+GGG 0.571503 3:-8543949 None:intergenic
GAGACCTCTATCTATGGCTA+TGG 0.574745 3:+8539945 None:intergenic
CCTATCGGAGCATGGAAGAA+GGG 0.580040 3:+8540933 MsG0380011964.01.T01:CDS
TAACATTTGGAATCAGTCCA+TGG 0.585665 3:-8540419 None:intergenic
TGAATGAGATGTGTCATTGG+TGG 0.596362 3:+8540658 MsG0380011964.01.T01:CDS
GTCATTTAATTGTTGCAATG+AGG 0.600768 3:+8540710 MsG0380011964.01.T01:CDS
CCTTAACTTCCTGAGTCGCA+GGG 0.601108 3:-8540383 None:intergenic
AGGACTGTCAATGCAAGACA+AGG 0.601436 3:-8540913 None:intergenic
AATGAGATGTGTCATTGGTG+GGG 0.601438 3:+8540660 MsG0380011964.01.T01:CDS
AAGGCCATTCCTCCTAGCCA+TGG 0.607208 3:+8540402 MsG0380011964.01.T01:CDS
ATTTGGACAATAGATTGTTG+CGG 0.607386 3:-8540125 None:intergenic
TTGACAGTCCTATCGGAGCA+TGG 0.608190 3:+8540925 MsG0380011964.01.T01:CDS
TCAAAATCCTGGTAGCGAGT+TGG 0.608234 3:-8540621 None:intergenic
TATGGGTGAACTTGGTGTGA+AGG 0.617765 3:+8540860 MsG0380011964.01.T01:CDS
TTTGGAATCAGTCCATGGCT+AGG 0.618535 3:-8540414 None:intergenic
TTTAATTACTGGAGTGACGG+AGG 0.621854 3:+8541001 MsG0380011964.01.T01:CDS
AGTACTTCCTCTAAGGGTGA+AGG 0.639317 3:-8540747 None:intergenic
GGAATCAGTCCATGGCTAGG+AGG 0.640219 3:-8540411 None:intergenic
AACACAAAGAAAACTGCTAG+AGG 0.653020 3:+8543877 MsG0380011964.01.T01:CDS
GTGGGGAGGAACAACTGATG+AGG 0.654556 3:+8540677 MsG0380011964.01.T01:CDS
GAGATGTGTCATTGGTGGGG+AGG 0.663261 3:+8540663 MsG0380011964.01.T01:CDS
GGACTGTCAATGCAAGACAA+GGG 0.723576 3:-8540912 None:intergenic
AGACATGCATCATCGTACAA+CGG 0.724176 3:-8540153 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTAAATATATTAATC+TGG + Chr3:8541677-8541696 MsG0380011964.01.T01:intron 10.0%
!! AGAAGATTATAATACATAAA+AGG - Chr3:8541631-8541650 None:intergenic 15.0%
!! GAAGATTATAATACATAAAA+GGG - Chr3:8541630-8541649 None:intergenic 15.0%
!!! AAATCAAAACCTATTTTAAT+AGG - Chr3:8540282-8540301 None:intergenic 15.0%
!!! TTTGATTTTATTCGTATATT+AGG + Chr3:8540294-8540313 MsG0380011964.01.T01:CDS 15.0%
!!! TTTTATGTATTATAATCTTC+TGG + Chr3:8541630-8541649 MsG0380011964.01.T01:intron 15.0%
!!! TTTTGATATTAATCTGATTT+AGG + Chr3:8541577-8541596 MsG0380011964.01.T01:intron 15.0%
!! ACTTCATTGTTAATTATCAA+TGG + Chr3:8543269-8543288 MsG0380011964.01.T01:intron 20.0%
!! ATTTGAGAATAAAATGAAAG+TGG + Chr3:8540239-8540258 MsG0380011964.01.T01:CDS 20.0%
!! GGCTATAATATGTAATTATA+AGG + Chr3:8540812-8540831 MsG0380011964.01.T01:CDS 20.0%
!! TATCTATTATCATGTATAAG+AGG + Chr3:8541212-8541231 MsG0380011964.01.T01:intron 20.0%
!! TCATTCCAAATTTCAATTAT+GGG + Chr3:8540843-8540862 MsG0380011964.01.T01:CDS 20.0%
!! TTAAATTGAGTGTTAACATT+TGG - Chr3:8540435-8540454 None:intergenic 20.0%
!! TTCATTCCAAATTTCAATTA+TGG + Chr3:8540842-8540861 MsG0380011964.01.T01:CDS 20.0%
!! TTTAATGATAAACCTTGTAA+TGG + Chr3:8540525-8540544 MsG0380011964.01.T01:CDS 20.0%
!! TTTAGCTATGATTAAGTTTA+TGG - Chr3:8543839-8543858 None:intergenic 20.0%
!!! GATTTTGTTTGTATAAATAC+TGG + Chr3:8541331-8541350 MsG0380011964.01.T01:intron 20.0%
!!! GCTTTTTTTGATTTAATTAC+TGG + Chr3:8540990-8541009 MsG0380011964.01.T01:CDS 20.0%
!!! TGATGAAAACACATTTTATA+GGG - Chr3:8542526-8542545 None:intergenic 20.0%
! AACACTCAATTTAATCTTCA+TGG + Chr3:8540441-8540460 MsG0380011964.01.T01:CDS 25.0%
! AATATTCATCAGAGTTCAAA+AGG - Chr3:8543007-8543026 None:intergenic 25.0%
! ACACTGTTATGAATATAATC+TGG - Chr3:8541821-8541840 None:intergenic 25.0%
! AGATTAATTTCGAAAGCTAT+AGG - Chr3:8543208-8543227 None:intergenic 25.0%
! ATAAACAAATTCAACATGAC+AGG - Chr3:8541290-8541309 None:intergenic 25.0%
! CAATTTAATCTTCATGGATT+TGG + Chr3:8540447-8540466 MsG0380011964.01.T01:CDS 25.0%
! CACTGTTATGAATATAATCT+GGG - Chr3:8541820-8541839 None:intergenic 25.0%
! CCTTCATTACCTATTAAAAT+AGG + Chr3:8540270-8540289 MsG0380011964.01.T01:CDS 25.0%
! TAAACATTCCAATGATAATC+AGG - Chr3:8540201-8540220 None:intergenic 25.0%
! TAATTGTAAATTCCACCAAT+CGG - Chr3:8541089-8541108 None:intergenic 25.0%
! TATAAATACTGGATATCCTT+AGG + Chr3:8541342-8541361 MsG0380011964.01.T01:intron 25.0%
! TATACAATCCAATCTAATAG+TGG + Chr3:8543122-8543141 MsG0380011964.01.T01:intron 25.0%
! TCTCATTCTAAACCATTTAT+CGG + Chr3:8540173-8540192 MsG0380011964.01.T01:CDS 25.0%
! TGGAATGTTTATTTACTTTC+TGG + Chr3:8540210-8540229 MsG0380011964.01.T01:CDS 25.0%
! TGGATAAAAGTTAACAAAGA+TGG + Chr3:8544003-8544022 MsG0380011964.01.T01:CDS 25.0%
! TTAATTACAAATTTACACCG+TGG - Chr3:8543730-8543749 None:intergenic 25.0%
! TTTGAACTCTGATGAATATT+GGG + Chr3:8543007-8543026 MsG0380011964.01.T01:intron 25.0%
!! CAAGTAATAACATGATTTTG+AGG - Chr3:8542846-8542865 None:intergenic 25.0%
!! GGTTGTTATTGGAAATAAAT+TGG + Chr3:8543701-8543720 MsG0380011964.01.T01:intron 25.0%
!! GTGATGAAAACACATTTTAT+AGG - Chr3:8542527-8542546 None:intergenic 25.0%
!! TGTCATGTTGAATTTGTTTA+TGG + Chr3:8541289-8541308 MsG0380011964.01.T01:intron 25.0%
!! TTGTTAACTTTTATCCAAGT+TGG - Chr3:8544000-8544019 None:intergenic 25.0%
!! TTTTGAACTCTGATGAATAT+TGG + Chr3:8543006-8543025 MsG0380011964.01.T01:intron 25.0%
!!! AAACTTTTTGGTGAATCATA+TGG + Chr3:8541457-8541476 MsG0380011964.01.T01:intron 25.0%
!!! ACAATTAATTGCTTTTGTCA+AGG + Chr3:8541102-8541121 MsG0380011964.01.T01:intron 25.0%
!!! ATTTTAATAGGTAATGAAGG+TGG - Chr3:8540270-8540289 None:intergenic 25.0%
!!! CAATTAATTGCTTTTGTCAA+GGG + Chr3:8541103-8541122 MsG0380011964.01.T01:intron 25.0%
!!! CCTATTTTAATAGGTAATGA+AGG - Chr3:8540273-8540292 None:intergenic 25.0%
AAACACGTTTATTATCAGCA+AGG - Chr3:8542425-8542444 None:intergenic 30.0%
AACCTCTTGATAGATTTAAC+AGG - Chr3:8540045-8540064 None:intergenic 30.0%
AAGTTACACTCTTGTAAGTA+AGG + Chr3:8541997-8542016 MsG0380011964.01.T01:intron 30.0%
AATGTGATTAACACCGAAAA+GGG - Chr3:8543301-8543320 None:intergenic 30.0%
ACACATAAGTATCAAAATCC+TGG - Chr3:8540635-8540654 None:intergenic 30.0%
ACCACATATACTCTTCTATA+TGG + Chr3:8543078-8543097 MsG0380011964.01.T01:intron 30.0%
AGCTTATCATAGCTTCAAAA+GGG - Chr3:8543339-8543358 None:intergenic 30.0%
ATAGTCTAAAAAGCAACTCA+TGG + Chr3:8540577-8540596 MsG0380011964.01.T01:CDS 30.0%
ATATTAGGCTCTGCTATTAA+TGG + Chr3:8540309-8540328 MsG0380011964.01.T01:CDS 30.0%
ATTAGAAGCAAAGTTCTTAG+AGG + Chr3:8543038-8543057 MsG0380011964.01.T01:intron 30.0%
ATTTCAATTATGGGTGAACT+TGG + Chr3:8540852-8540871 MsG0380011964.01.T01:CDS 30.0%
ATTTGAATGAGATGTGTCAT+TGG + Chr3:8540655-8540674 MsG0380011964.01.T01:CDS 30.0%
ATTTGGACAATAGATTGTTG+CGG - Chr3:8540128-8540147 None:intergenic 30.0%
CAAAAGCTTCCTTAAAAGAT+AGG - Chr3:8543390-8543409 None:intergenic 30.0%
CAAATACAAGAGTTGCATTA+TGG + Chr3:8540358-8540377 MsG0380011964.01.T01:CDS 30.0%
CATTAAGAAGAGTAAGAGAT+CGG - Chr3:8542956-8542975 None:intergenic 30.0%
CTCATTCTAAACCATTTATC+GGG + Chr3:8540174-8540193 MsG0380011964.01.T01:CDS 30.0%
CTTTATAGTCATCCTTAACA+TGG - Chr3:8540479-8540498 None:intergenic 30.0%
GGAACATGTTTATGAAATCA+GGG - Chr3:8540107-8540126 None:intergenic 30.0%
GGACAGGTCAAAATATTAAT+TGG + Chr3:8543422-8543441 MsG0380011964.01.T01:intron 30.0%
GTCATTTAATTGTTGCAATG+AGG + Chr3:8540710-8540729 MsG0380011964.01.T01:CDS 30.0%
GTTCACCCATAATTGAAATT+TGG - Chr3:8540851-8540870 None:intergenic 30.0%
GTTGGCGTTATTTAGATTAT+TGG - Chr3:8541764-8541783 None:intergenic 30.0%
GTTGTTCTTGGTTTATCAAT+CGG + Chr3:8541381-8541400 MsG0380011964.01.T01:intron 30.0%
TAACACTAGCATTAAGATGA+GGG - Chr3:8543246-8543265 None:intergenic 30.0%
TAGCTTATCATAGCTTCAAA+AGG - Chr3:8543340-8543359 None:intergenic 30.0%
TGATTTAATTACTGGAGTGA+CGG + Chr3:8540998-8541017 MsG0380011964.01.T01:CDS 30.0%
TTAACCTCCTTGATACTATT+TGG + Chr3:8543761-8543780 MsG0380011964.01.T01:intron 30.0%
TTCCTGTTAAATCTATCAAG+AGG + Chr3:8540040-8540059 MsG0380011964.01.T01:CDS 30.0%
TTCTATTCAATTCGATTCAG+TGG + Chr3:8543669-8543688 MsG0380011964.01.T01:intron 30.0%
TTGTTCTTGGTTTATCAATC+GGG + Chr3:8541382-8541401 MsG0380011964.01.T01:intron 30.0%
! ATACACAACCTTTGTTTCAA+GGG - Chr3:8542066-8542085 None:intergenic 30.0%
! TAATAAAGACCATGATTTGC+AGG - Chr3:8540076-8540095 None:intergenic 30.0%
! TCAATGGAATAATCCCTTTT+CGG + Chr3:8543285-8543304 MsG0380011964.01.T01:intron 30.0%
! TCCATATAGAAGAGTATATG+TGG - Chr3:8543082-8543101 None:intergenic 30.0%
! TGGAAATAAATTGGTTTCCA+CGG + Chr3:8543710-8543729 MsG0380011964.01.T01:intron 30.0%
! TTAGCTTGGTTGTGTTAAAT+GGG + Chr3:8540784-8540803 MsG0380011964.01.T01:CDS 30.0%
!! TAGCTATGAATCTTTAGAAC+TGG + Chr3:8543626-8543645 MsG0380011964.01.T01:intron 30.0%
!! TGGAAAAAAGAGAAGCATTT+GGG + Chr3:8543363-8543382 MsG0380011964.01.T01:intron 30.0%
!! TTCCAACAAAGTTTCAAGTT+AGG - Chr3:8542984-8543003 None:intergenic 30.0%
!! TTGGAAAAAAGAGAAGCATT+TGG + Chr3:8543362-8543381 MsG0380011964.01.T01:intron 30.0%
!!! AAGCTTTTGAGTTCAAGTAT+GGG + Chr3:8543401-8543420 MsG0380011964.01.T01:intron 30.0%
AAAGGTTGTGTATGAGAACT+TGG + Chr3:8542073-8542092 MsG0380011964.01.T01:intron 35.0%
AACAACTGATGAGGCATATA+TGG + Chr3:8540686-8540705 MsG0380011964.01.T01:CDS 35.0%
AACACAAAGAAAACTGCTAG+AGG + Chr3:8543877-8543896 MsG0380011964.01.T01:CDS 35.0%
AAGAGAAATCTTCTTCCGAT+TGG + Chr3:8541071-8541090 MsG0380011964.01.T01:intron 35.0%
AATTAACTCTTCACTGCTAC+AGG - Chr3:8542613-8542632 None:intergenic 35.0%
ACAGAGAACACAGTTTATAC+AGG - Chr3:8542638-8542657 None:intergenic 35.0%
AGTGTTGTAATCTTCATGGT+TGG + Chr3:8541700-8541719 MsG0380011964.01.T01:intron 35.0%
AGTTTGCAGTACATTGGATT+CGG - Chr3:8541442-8541461 None:intergenic 35.0%
ATAGCTAAAGTCTCTAATGC+TGG + Chr3:8543850-8543869 MsG0380011964.01.T01:CDS 35.0%
ATTTGGCTATGACCATGTTA+AGG + Chr3:8540464-8540483 MsG0380011964.01.T01:CDS 35.0%
CAACCATCAAAGAAGTGATT+TGG + Chr3:8543962-8543981 MsG0380011964.01.T01:CDS 35.0%
CACTAAAGTCTGCAAAACAA+GGG - Chr3:8541412-8541431 None:intergenic 35.0%
CAGAAAAGAAAATGACGAAC+TGG + Chr3:8540968-8540987 MsG0380011964.01.T01:CDS 35.0%
CAGAGAACACAGTTTATACA+GGG - Chr3:8542637-8542656 None:intergenic 35.0%
CAGTCTAGTTGAAAGTAAAG+AGG - Chr3:8541519-8541538 None:intergenic 35.0%
CCAAAAAGTTTGCAGTACAT+TGG - Chr3:8541448-8541467 None:intergenic 35.0%
CGGAACATGTTTATGAAATC+AGG - Chr3:8540108-8540127 None:intergenic 35.0%
CTAACACTAGCATTAAGATG+AGG - Chr3:8543247-8543266 None:intergenic 35.0%
CTAACCTTCTTCTTGATTGT+TGG - Chr3:8539973-8539992 None:intergenic 35.0%
CTCCTAACTTGAAACTTTGT+TGG + Chr3:8542979-8542998 MsG0380011964.01.T01:intron 35.0%
CTGTAAAAACCTATATCAGC+AGG - Chr3:8542279-8542298 None:intergenic 35.0%
GAAGCTATGATAAGCTAGTT+TGG + Chr3:8543343-8543362 MsG0380011964.01.T01:intron 35.0%
GAATGTGATTAACACCGAAA+AGG - Chr3:8543302-8543321 None:intergenic 35.0%
GACTAATCGCCAAATTTCTT+TGG - Chr3:8541851-8541870 None:intergenic 35.0%
GGAAGATATGTGGTTGTTAT+TGG + Chr3:8543690-8543709 MsG0380011964.01.T01:intron 35.0%
GGACACTAAACAATATGTGA+TGG - Chr3:8542681-8542700 None:intergenic 35.0%
GGGTTTAATGTTAACCTTAC+AGG - Chr3:8543932-8543951 None:intergenic 35.0%
GTCCATTGTCCAAAGAAATT+TGG + Chr3:8541839-8541858 MsG0380011964.01.T01:intron 35.0%
TCACTAAAGTCTGCAAAACA+AGG - Chr3:8541413-8541432 None:intergenic 35.0%
TGTTTAGTCCCTTGAAACAA+AGG + Chr3:8542055-8542074 MsG0380011964.01.T01:intron 35.0%
TTACAAGATGAGCACATTGA+AGG - Chr3:8543562-8543581 None:intergenic 35.0%
TTCTGAGCCAAATAGTATCA+AGG - Chr3:8543771-8543790 None:intergenic 35.0%
TTGTTTCAAGGGACTAAACA+TGG - Chr3:8542055-8542074 None:intergenic 35.0%
! CAAATCACTTCTTTGATGGT+TGG - Chr3:8543964-8543983 None:intergenic 35.0%
! CAACGATTAGTTGCATTCTA+TGG + Chr3:8541903-8541922 MsG0380011964.01.T01:intron 35.0%
! CATACACAACCTTTGTTTCA+AGG - Chr3:8542067-8542086 None:intergenic 35.0%
! CCAATGTACTGCAAACTTTT+TGG + Chr3:8541445-8541464 MsG0380011964.01.T01:intron 35.0%
! GTTAGCTTGGTTGTGTTAAA+TGG + Chr3:8540783-8540802 MsG0380011964.01.T01:CDS 35.0%
! TAACATTTGGAATCAGTCCA+TGG - Chr3:8540422-8540441 None:intergenic 35.0%
! TTTTGGTGAATCATATGGCT+TGG + Chr3:8541462-8541481 MsG0380011964.01.T01:intron 35.0%
!! AACTTTTATCCAAGTTGGCA+AGG - Chr3:8543995-8544014 None:intergenic 35.0%
!! ACTTTTATCCAAGTTGGCAA+GGG - Chr3:8543994-8544013 None:intergenic 35.0%
!! GGAAAAAAGAGAAGCATTTG+GGG + Chr3:8543364-8543383 MsG0380011964.01.T01:intron 35.0%
!! TAACACACTTTGAGTTGATC+TGG + Chr3:8541790-8541809 MsG0380011964.01.T01:intron 35.0%
!!! ACTTTTTTGCTGAATTTCCG+TGG - Chr3:8542763-8542782 None:intergenic 35.0%
!!! CAAGTTACTTTTTCCATCAG+TGG - Chr3:8542139-8542158 None:intergenic 35.0%
!!! CTTTTTTGCTGAATTTCCGT+GGG - Chr3:8542762-8542781 None:intergenic 35.0%
!!! GAAGCTTTTGAGTTCAAGTA+TGG + Chr3:8543400-8543419 MsG0380011964.01.T01:intron 35.0%
!!! TGGTTGTTTTGATGTTAGCT+TGG + Chr3:8540770-8540789 MsG0380011964.01.T01:CDS 35.0%
AACTCAAAGTGTGTTAGCCA+GGG - Chr3:8541786-8541805 None:intergenic 40.0%
AACTGCTAGAGGTGATATGT+TGG + Chr3:8543888-8543907 MsG0380011964.01.T01:CDS 40.0%
AATCTAAATAACGCCAACCC+TGG + Chr3:8541766-8541785 MsG0380011964.01.T01:intron 40.0%
ACAACCAAGTACTTCCTCTA+AGG - Chr3:8540757-8540776 None:intergenic 40.0%
AGAAATCTTCTTCCGATTGG+TGG + Chr3:8541074-8541093 MsG0380011964.01.T01:intron 40.0%
AGACATGCATCATCGTACAA+CGG - Chr3:8540156-8540175 None:intergenic 40.0%
ATCGTACAACGGATGAGATT+TGG - Chr3:8540145-8540164 None:intergenic 40.0%
CAAAAGGGATAGTTACCTCA+GGG - Chr3:8543324-8543343 None:intergenic 40.0%
CAACCAAGTACTTCCTCTAA+GGG - Chr3:8540756-8540775 None:intergenic 40.0%
CAAGAACAACTAGCTAGTTG+AGG - Chr3:8541371-8541390 None:intergenic 40.0%
CAATCCAATCTAATAGTGGC+TGG + Chr3:8543126-8543145 MsG0380011964.01.T01:intron 40.0%
CCTTTCTCAGAAGTTGGATT+AGG + Chr3:8542927-8542946 MsG0380011964.01.T01:intron 40.0%
CGCCAAATTTCTTTGGACAA+TGG - Chr3:8541844-8541863 None:intergenic 40.0%
CTATAGCAGAAAAAGCAGTC+TGG - Chr3:8542739-8542758 None:intergenic 40.0%
CTCAACTAGCTAGTTGTTCT+TGG + Chr3:8541369-8541388 MsG0380011964.01.T01:intron 40.0%
GAAAGAGAACCTGCTGATAT+AGG + Chr3:8542267-8542286 MsG0380011964.01.T01:intron 40.0%
GAAGCAAAGTTCTTAGAGGT+AGG + Chr3:8543042-8543061 MsG0380011964.01.T01:intron 40.0%
GATAATCAGGACCCGATAAA+TGG - Chr3:8540188-8540207 None:intergenic 40.0%
GATTCAGCTCTTTGACACTT+TGG + Chr3:8542818-8542837 MsG0380011964.01.T01:intron 40.0%
GGACCAAATCACTTCTTTGA+TGG - Chr3:8543968-8543987 None:intergenic 40.0%
GTCAAGACTGCATAGAATCT+TGG - Chr3:8543449-8543468 None:intergenic 40.0%
TAGTAACCTCAAAGCCTGTA+AGG + Chr3:8543915-8543934 MsG0380011964.01.T01:CDS 40.0%
TATCGGGTCCTGATTATCAT+TGG + Chr3:8540190-8540209 MsG0380011964.01.T01:CDS 40.0%
TATTACACCTTCACCCTTAG+AGG + Chr3:8540740-8540759 MsG0380011964.01.T01:CDS 40.0%
TCAAAAGGGATAGTTACCTC+AGG - Chr3:8543325-8543344 None:intergenic 40.0%
TCAAGCTTCAGACCATTACA+AGG - Chr3:8540540-8540559 None:intergenic 40.0%
TCGATTCAGTGGAAGATATG+TGG + Chr3:8543680-8543699 MsG0380011964.01.T01:intron 40.0%
TCTAATAGTGGCTGGCAAAT+TGG + Chr3:8543134-8543153 MsG0380011964.01.T01:intron 40.0%
TGAGCCAAATAGTATCAAGG+AGG - Chr3:8543768-8543787 None:intergenic 40.0%
TGATGAAAACCTCCTGTCTA+GGG + Chr3:8543525-8543544 MsG0380011964.01.T01:intron 40.0%
TGCAAACCTTTCTCAGAAGT+TGG + Chr3:8542921-8542940 MsG0380011964.01.T01:intron 40.0%
TGTTAACCTTACAGGCTTTG+AGG - Chr3:8543924-8543943 None:intergenic 40.0%
TTCCACTTGACAATAAGAGC+TGG - Chr3:8541151-8541170 None:intergenic 40.0%
TTTAATTACTGGAGTGACGG+AGG + Chr3:8541001-8541020 MsG0380011964.01.T01:CDS 40.0%
TTTCTTGTGCCTGCAAATCA+TGG + Chr3:8540064-8540083 MsG0380011964.01.T01:CDS 40.0%
TTTGCCAGCCACTATTAGAT+TGG - Chr3:8543133-8543152 None:intergenic 40.0%
! AATGAGATGTGTCATTGGTG+GGG + Chr3:8540660-8540679 MsG0380011964.01.T01:CDS 40.0%
! ATAGGGCATTTACTCTTCTC+TGG - Chr3:8542509-8542528 None:intergenic 40.0%
! ATGTTATTAGAGTGTCCTCG+TGG + Chr3:8542547-8542566 MsG0380011964.01.T01:intron 40.0%
! CCTAATCCAACTTCTGAGAA+AGG - Chr3:8542930-8542949 None:intergenic 40.0%
! CTTTGATGGTTGGAGCTTTA+GGG - Chr3:8543954-8543973 None:intergenic 40.0%
! GAATGAGATGTGTCATTGGT+GGG + Chr3:8540659-8540678 MsG0380011964.01.T01:CDS 40.0%
! GGTTGTGTTAAATGGGTTTG+TGG + Chr3:8540791-8540810 MsG0380011964.01.T01:CDS 40.0%
! GTGTCAAAGGAGAAAGGTTT+TGG + Chr3:8541030-8541049 MsG0380011964.01.T01:intron 40.0%
! TCTTGCATTGACAGTCCTAT+CGG + Chr3:8540918-8540937 MsG0380011964.01.T01:CDS 40.0%
! TCTTTGATGGTTGGAGCTTT+AGG - Chr3:8543955-8543974 None:intergenic 40.0%
! TGAATGAGATGTGTCATTGG+TGG + Chr3:8540658-8540677 MsG0380011964.01.T01:CDS 40.0%
! TTGTCAAGGGAAGTTTTCAC+AGG + Chr3:8541116-8541135 MsG0380011964.01.T01:intron 40.0%
! TTTGAGTTCAAGTATGGGAC+AGG + Chr3:8543406-8543425 MsG0380011964.01.T01:intron 40.0%
! TTTGATGGTTGGAGCTTTAG+GGG - Chr3:8543953-8543972 None:intergenic 40.0%
!! AACTTGGTGTGAAGGAATCA+TGG + Chr3:8540868-8540887 MsG0380011964.01.T01:CDS 40.0%
!! AATCATATGGCTTGGTGAGT+TGG + Chr3:8541470-8541489 MsG0380011964.01.T01:intron 40.0%
!! AGATTGGTGTCAAAGGAGAA+AGG + Chr3:8541024-8541043 MsG0380011964.01.T01:CDS 40.0%
!! CATTTGGGGCCTATCTTTTA+AGG + Chr3:8543378-8543397 MsG0380011964.01.T01:intron 40.0%
!! CTGGAGTGTTGTAATCTTCA+TGG + Chr3:8541696-8541715 MsG0380011964.01.T01:intron 40.0%
!! TCTGAAGCTTGAGCGTTTTT+GGG + Chr3:8540548-8540567 MsG0380011964.01.T01:CDS 40.0%
ACAAGCAAGGATTTGGAGGA+GGG - Chr3:8543475-8543494 None:intergenic 45.0%
AGGACTGTCAATGCAAGACA+AGG - Chr3:8540916-8540935 None:intergenic 45.0%
CAAAGTTCTTAGAGGTAGGC+GGG + Chr3:8543046-8543065 MsG0380011964.01.T01:intron 45.0%
CAACTCAAAGTGTGTTAGCC+AGG - Chr3:8541787-8541806 None:intergenic 45.0%
CACTAGCATTAAGATGAGGG+TGG - Chr3:8543243-8543262 None:intergenic 45.0%
CTCCAGCTCTTATTGTCAAG+TGG + Chr3:8541146-8541165 MsG0380011964.01.T01:intron 45.0%
CTGAGAAAGGTTTGCAAGAC+TGG - Chr3:8542917-8542936 None:intergenic 45.0%
CTGATGAAAACCTCCTGTCT+AGG + Chr3:8543524-8543543 MsG0380011964.01.T01:intron 45.0%
GATGAAAACCTCCTGTCTAG+GGG + Chr3:8543526-8543545 MsG0380011964.01.T01:intron 45.0%
GCAAAGTTCTTAGAGGTAGG+CGG + Chr3:8543045-8543064 MsG0380011964.01.T01:intron 45.0%
GGACTGTCAATGCAAGACAA+GGG - Chr3:8540915-8540934 None:intergenic 45.0%
GGCTCCAACAATCAAGAAGA+AGG + Chr3:8539966-8539985 MsG0380011964.01.T01:CDS 45.0%
GGTGTTAATCACATTCCCTG+AGG + Chr3:8543306-8543325 MsG0380011964.01.T01:intron 45.0%
TAGCTAGTTGAGGCAACCTA+AGG - Chr3:8541361-8541380 None:intergenic 45.0%
TCATGTCTGCAGCATCTATC+TGG + Chr3:8542791-8542810 MsG0380011964.01.T01:intron 45.0%
TGTCCTAGTACTCGAAGTGT+TGG + Chr3:8542696-8542715 MsG0380011964.01.T01:intron 45.0%
TTGCCAACACTTCGAGTACT+AGG - Chr3:8542702-8542721 None:intergenic 45.0%
! ACAGGAGGTTTTCATCAGAG+GGG - Chr3:8543522-8543541 None:intergenic 45.0%
! AGACAGGAGGTTTTCATCAG+AGG - Chr3:8543524-8543543 None:intergenic 45.0%
! AGTACTTCCTCTAAGGGTGA+AGG - Chr3:8540750-8540769 None:intergenic 45.0%
! GACAGGAGGTTTTCATCAGA+GGG - Chr3:8543523-8543542 None:intergenic 45.0%
! TCAAAATCCTGGTAGCGAGT+TGG - Chr3:8540624-8540643 None:intergenic 45.0%
! TCAACTTTTCGCTAGACAGC+TGG + Chr3:8543173-8543192 MsG0380011964.01.T01:intron 45.0%
! TCTCTGTACTGATGCAGTAG+AGG + Chr3:8542651-8542670 MsG0380011964.01.T01:intron 45.0%
! TTATCCAAGTTGGCAAGGGA+GGG - Chr3:8543990-8544009 None:intergenic 45.0%
! TTTATCCAAGTTGGCAAGGG+AGG - Chr3:8543991-8544010 None:intergenic 45.0%
! TTTGGAATCAGTCCATGGCT+AGG - Chr3:8540417-8540436 None:intergenic 45.0%
!! GCTTTTTCTGCTATAGCCCA+CGG + Chr3:8542743-8542762 MsG0380011964.01.T01:intron 45.0%
!! GTCTGAAGCTTGAGCGTTTT+TGG + Chr3:8540547-8540566 MsG0380011964.01.T01:CDS 45.0%
!! TATGGGTGAACTTGGTGTGA+AGG + Chr3:8540860-8540879 MsG0380011964.01.T01:CDS 45.0%
!! TCACCCTTAGAGGAAGTACT+TGG + Chr3:8540750-8540769 MsG0380011964.01.T01:CDS 45.0%
!! TTGATGGTTGGAGCTTTAGG+GGG - Chr3:8543952-8543971 None:intergenic 45.0%
ATTATGGAACCCTGCGACTC+AGG + Chr3:8540374-8540393 MsG0380011964.01.T01:CDS 50.0%
CAAAGTGTGTTAGCCAGGGT+TGG - Chr3:8541782-8541801 None:intergenic 50.0%
CCAAATCCTTGCTTGTCTGG+AGG + Chr3:8543479-8543498 MsG0380011964.01.T01:intron 50.0%
CCAGACAAGCAAGGATTTGG+AGG - Chr3:8543479-8543498 None:intergenic 50.0%
CCTATCGGAGCATGGAAGAA+GGG + Chr3:8540933-8540952 MsG0380011964.01.T01:CDS 50.0%
CCTCCAAATCCTTGCTTGTC+TGG + Chr3:8543476-8543495 MsG0380011964.01.T01:intron 50.0%
CCTCCAGACAAGCAAGGATT+TGG - Chr3:8543482-8543501 None:intergenic 50.0%
CCTTAACTTCCTGAGTCGCA+GGG - Chr3:8540386-8540405 None:intergenic 50.0%
GACAAGCAAGGATTTGGAGG+AGG - Chr3:8543476-8543495 None:intergenic 50.0%
GCTGATTGCATGTCCACTGA+TGG + Chr3:8542123-8542142 MsG0380011964.01.T01:intron 50.0%
GTAGATAAGCTCCCCTAGAC+AGG - Chr3:8543540-8543559 None:intergenic 50.0%
TCCAAGACAAGCAGCTGCAT+TGG + Chr3:8543806-8543825 MsG0380011964.01.T01:CDS 50.0%
TCCAATGCAGCTGCTTGTCT+TGG - Chr3:8543810-8543829 None:intergenic 50.0%
TCCTATCGGAGCATGGAAGA+AGG + Chr3:8540932-8540951 MsG0380011964.01.T01:CDS 50.0%
TCTTTGACACTACGACCACG+AGG - Chr3:8542565-8542584 None:intergenic 50.0%
TGAGCAGACGAGTTGTTGAG+TGG + Chr3:8542864-8542883 MsG0380011964.01.T01:intron 50.0%
TGATATGCCAACTCGCTACC+AGG + Chr3:8540614-8540633 MsG0380011964.01.T01:CDS 50.0%
TTGACAGTCCTATCGGAGCA+TGG + Chr3:8540925-8540944 MsG0380011964.01.T01:CDS 50.0%
! CATTAGCCTCCAGACAAGCA+AGG - Chr3:8543488-8543507 None:intergenic 50.0%
! TATCCAAGTTGGCAAGGGAG+GGG - Chr3:8543989-8544008 None:intergenic 50.0%
! TTTTCGCTAGACAGCTGGTG+TGG + Chr3:8543178-8543197 MsG0380011964.01.T01:intron 50.0%
!! ACGGAGGAGATTGGTGTCAA+AGG + Chr3:8541017-8541036 MsG0380011964.01.T01:CDS 50.0%
AAGGCCATTCCTCCTAGCCA+TGG + Chr3:8540402-8540421 MsG0380011964.01.T01:CDS 55.0%
CAGTCCATGGCTAGGAGGAA+TGG - Chr3:8540409-8540428 None:intergenic 55.0%
CCCTGCGACTCAGGAAGTTA+AGG + Chr3:8540383-8540402 MsG0380011964.01.T01:CDS 55.0%
CCCTTCTTCCATGCTCCGAT+AGG - Chr3:8540936-8540955 None:intergenic 55.0%
GATAAGCTCCCCTAGACAGG+AGG - Chr3:8543537-8543556 None:intergenic 55.0%
GCCTTAACTTCCTGAGTCGC+AGG - Chr3:8540387-8540406 None:intergenic 55.0%
GGAATCAGTCCATGGCTAGG+AGG - Chr3:8540414-8540433 None:intergenic 55.0%
GTGGGGAGGAACAACTGATG+AGG + Chr3:8540677-8540696 MsG0380011964.01.T01:CDS 55.0%
! ACTGGAGTGACGGAGGAGAT+TGG + Chr3:8541008-8541027 MsG0380011964.01.T01:CDS 55.0%
! GAGATGTGTCATTGGTGGGG+AGG + Chr3:8540663-8540682 MsG0380011964.01.T01:CDS 55.0%
!! AGATGAGGGTGGTGCTGCAT+AGG - Chr3:8543232-8543251 None:intergenic 55.0%
GGTCCCCTCCCTTGCCAACT+TGG + Chr3:8543983-8544002 MsG0380011964.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 8539958 8544062 8539958 ID=MsG0380011964.01;Name=MsG0380011964.01
Chr3 mRNA 8539958 8544062 8539958 ID=MsG0380011964.01.T01;Parent=MsG0380011964.01;Name=MsG0380011964.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|2|0|453
Chr3 exon 8539958 8541045 8539958 ID=MsG0380011964.01.T01:exon:1028;Parent=MsG0380011964.01.T01
Chr3 exon 8543789 8544062 8543789 ID=MsG0380011964.01.T01:exon:1029;Parent=MsG0380011964.01.T01
Chr3 CDS 8539958 8541045 8539958 ID=MsG0380011964.01.T01:cds;Parent=MsG0380011964.01.T01
Chr3 CDS 8543789 8544062 8543789 ID=MsG0380011964.01.T01:cds;Parent=MsG0380011964.01.T01
Gene Sequence

>MsG0380011964.01.T01

ATGGCTATGGCTCCAACAATCAAGAAGAAGGTTAGTAGTAACTATATGCATGATGATATTGCTTTCTCTATTCTCTCTAAACTTCCTGTTAAATCTATCAAGAGGTTTTCTTGTGCCTGCAAATCATGGTCTTTATTATTTGAAAACCCTGATTTCATAAACATGTTCCGCAACAATCTATTGTCCAAATCTCATCCGTTGTACGATGATGCATGTCTCATTCTAAACCATTTATCGGGTCCTGATTATCATTGGAATGTTTATTTACTTTCTGGTGATAGATTTGAGAATAAAATGAAAGTGGATTTGCCACCTTCATTACCTATTAAAATAGGTTTTGATTTTATTCGTATATTAGGCTCTGCTATTAATGGTACTCTTTGTATATATGACTATCATACAAATACAAGAGTTGCATTATGGAACCCTGCGACTCAGGAAGTTAAGGCCATTCCTCCTAGCCATGGACTGATTCCAAATGTTAACACTCAATTTAATCTTCATGGATTTGGCTATGACCATGTTAAGGATGACTATAAAGTCATTCAACATGTGAATTATTTTACATTTAATGATAAACCTTGTAATGGTCTGAAGCTTGAGCGTTTTTGGGAAATATATAGTCTAAAAAGCAACTCATGGAAGAAAATCAATTTTGATATGCCAACTCGCTACCAGGATTTTGATACTTATGTGTATTTGAATGAGATGTGTCATTGGTGGGGAGGAACAACTGATGAGGCATATATGGTGTCATTTAATTGTTGCAATGAGGACTACTTTATTACACCTTCACCCTTAGAGGAAGTACTTGGTTGTTTTGATGTTAGCTTGGTTGTGTTAAATGGGTTTGTGGCTATAATATGTAATTATAAGGAGACTAATTCATTCCAAATTTCAATTATGGGTGAACTTGGTGTGAAGGAATCATGGATTAGACTCTTCGATGTTGAACCCTTGTCTTGCATTGACAGTCCTATCGGAGCATGGAAGAAGGGCAATTTATTCTTCAGAAAAGAAAATGACGAACTGGCTTTTTTTGATTTAATTACTGGAGTGACGGAGGAGATTGGTGTCAAAGGAGAAAGAAGAAATCAGATAAGATTCCAAGACAAGCAGCTGCATTGGAAATCTGCCATAAACTTAATCATAGCTAAAGTCTCTAATGCTGGCAATAACACAAAGAAAACTGCTAGAGGTGATATGTTGGAGTTTAGTAACCTCAAAGCCTGTAAGGTTAACATTAAACCCCCTAAAGCTCCAACCATCAAAGAAGTGATTTGGTCCCCTCCCTTGCCAACTTGGATAAAAGTTAACAAAGATGGAACTTCTACAAAGAATCTAGTAAAAGCTTTAGCATGA

Protein sequence

>MsG0380011964.01.T01

MAMAPTIKKKVSSNYMHDDIAFSILSKLPVKSIKRFSCACKSWSLLFENPDFINMFRNNLLSKSHPLYDDACLILNHLSGPDYHWNVYLLSGDRFENKMKVDLPPSLPIKIGFDFIRILGSAINGTLCIYDYHTNTRVALWNPATQEVKAIPPSHGLIPNVNTQFNLHGFGYDHVKDDYKVIQHVNYFTFNDKPCNGLKLERFWEIYSLKSNSWKKINFDMPTRYQDFDTYVYLNEMCHWWGGTTDEAYMVSFNCCNEDYFITPSPLEEVLGCFDVSLVVLNGFVAIICNYKETNSFQISIMGELGVKESWIRLFDVEPLSCIDSPIGAWKKGNLFFRKENDELAFFDLITGVTEEIGVKGERRNQIRFQDKQLHWKSAINLIIAKVSNAGNNTKKTARGDMLEFSNLKACKVNIKPPKAPTIKEVIWSPPLPTWIKVNKDGTSTKNLVKALA*