AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026298.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026298.01.T01 MTR_5g043605 80.296 406 35 3 5 408 1 363 0.0 643
MsG0580026298.01.T01 MTR_5g068490 65.734 286 81 6 100 384 8 277 1.36e-121 360
MsG0580026298.01.T01 MTR_3g011120 54.768 367 135 11 28 373 13 369 1.16e-116 351
MsG0580026298.01.T01 MTR_8g467670 49.610 385 160 10 22 384 7 379 2.30e-105 323
MsG0580026298.01.T01 MTR_1g098180 47.922 409 141 14 5 384 1 366 1.17e-102 315
MsG0580026298.01.T01 MTR_5g024260 50.503 398 139 17 9 367 10 388 1.16e-101 314
MsG0580026298.01.T01 MTR_2g066200 46.825 378 172 12 27 379 10 383 4.88e-100 309
MsG0580026298.01.T01 MTR_8g063440 43.909 394 181 11 19 384 2 383 9.10e-95 295
MsG0580026298.01.T01 MTR_2g066170 45.000 380 182 10 27 383 10 385 3.01e-94 294
MsG0580026298.01.T01 MTR_2g034700 47.581 372 162 11 25 376 10 368 3.87e-94 293
MsG0580026298.01.T01 MTR_8g064890 45.122 410 173 13 5 384 1 388 6.52e-92 288
MsG0580026298.01.T01 MTR_0129s0070 44.787 422 178 17 5 390 1 403 2.15e-90 284
MsG0580026298.01.T01 MTR_6g080680 43.176 403 186 13 5 378 1 389 7.37e-90 283
MsG0580026298.01.T01 MTR_6g086825 43.796 411 181 11 14 384 60 460 1.53e-89 284
MsG0580026298.01.T01 MTR_0129s0120 45.363 399 166 15 16 379 10 391 2.91e-88 278
MsG0580026298.01.T01 MTR_4g028510 44.501 391 180 11 29 385 16 403 3.45e-88 280
MsG0580026298.01.T01 MTR_4g130330 42.748 393 186 11 25 383 3 390 1.17e-86 274
MsG0580026298.01.T01 MTR_2g066150 44.904 363 171 10 28 379 11 355 1.32e-86 273
MsG0580026298.01.T01 MTR_8g039500 46.064 343 164 9 27 354 10 346 3.25e-86 271
MsG0580026298.01.T01 MTR_5g097330 41.519 395 187 12 28 384 15 403 7.72e-86 272
MsG0580026298.01.T01 MTR_4g028750 42.400 375 182 10 19 363 6 376 1.89e-85 271
MsG0580026298.01.T01 MTR_4g028660 42.670 382 183 11 27 376 14 391 2.73e-85 271
MsG0580026298.01.T01 MTR_4g027450 42.670 382 183 11 27 376 14 391 2.73e-85 271
MsG0580026298.01.T01 MTR_2g038680 41.584 404 174 14 29 381 16 408 4.71e-85 271
MsG0580026298.01.T01 MTR_0134s0060 41.727 417 184 11 19 383 2 411 7.01e-85 270
MsG0580026298.01.T01 MTR_2g065860 43.081 383 185 13 28 383 11 387 2.76e-84 268
MsG0580026298.01.T01 MTR_0054s0090 42.157 408 185 13 13 378 2 400 1.50e-83 266
MsG0580026298.01.T01 MTR_0831s0010 39.663 416 202 12 1 383 21 420 5.32e-83 266
MsG0580026298.01.T01 MTR_6g079770 42.079 404 181 11 27 381 15 414 1.22e-82 265
MsG0580026298.01.T01 MTR_5g097680 41.346 416 185 15 26 384 14 427 1.30e-82 265
MsG0580026298.01.T01 MTR_2g022000 40.759 395 180 12 27 372 14 403 2.53e-82 264
MsG0580026298.01.T01 MTR_2g065840 42.338 385 186 12 28 383 11 388 2.58e-82 263
MsG0580026298.01.T01 MTR_0054s0100 40.521 422 187 13 1 378 1 402 5.01e-82 263
MsG0580026298.01.T01 MTR_4g028680 41.944 391 188 13 27 383 14 399 9.09e-82 262
MsG0580026298.01.T01 MTR_7g017130 40.568 387 192 11 29 384 18 397 2.41e-81 261
MsG0580026298.01.T01 MTR_2g021800 39.401 401 188 11 26 376 13 408 3.31e-81 261
MsG0580026298.01.T01 MTR_8g464770 42.597 385 174 14 26 379 9 377 8.28e-81 258
MsG0580026298.01.T01 MTR_0129s0050 40.000 420 193 10 11 384 2 408 1.06e-80 259
MsG0580026298.01.T01 MTR_6g079810 40.633 411 196 12 14 381 55 460 2.37e-79 258
MsG0580026298.01.T01 MTR_7g017170 39.599 399 191 12 29 384 18 409 1.46e-78 254
MsG0580026298.01.T01 MTR_5g043580 79.874 159 4 1 415 573 1 131 2.77e-78 244
MsG0580026298.01.T01 MTR_5g037680 41.538 390 185 14 27 383 6 385 2.86e-78 254
MsG0580026298.01.T01 MTR_8g064790 42.547 369 157 9 27 384 13 337 4.76e-78 250
MsG0580026298.01.T01 MTR_6g478230 41.320 409 190 14 14 384 11 407 1.73e-77 251
MsG0580026298.01.T01 MTR_2g021950 40.260 385 192 12 27 379 14 392 2.24e-77 250
MsG0580026298.01.T01 MTR_1g007450 42.092 392 174 15 17 370 6 382 2.86e-77 251
MsG0580026298.01.T01 MTR_8g012090 44.058 345 152 11 27 354 14 334 2.96e-77 248
MsG0580026298.01.T01 MTR_8g046310 42.895 380 172 17 27 380 14 374 2.19e-76 247
MsG0580026298.01.T01 MTR_5g097220 39.500 400 184 13 29 379 13 403 6.05e-76 247
MsG0580026298.01.T01 MTR_7g017040 40.201 398 199 12 20 384 7 398 1.57e-74 243
MsG0580026298.01.T01 MTR_5g059430 38.519 405 192 12 27 380 24 422 1.76e-74 243
MsG0580026298.01.T01 MTR_5g069390 37.198 414 211 13 9 381 9 414 2.04e-74 246
MsG0580026298.01.T01 MTR_8g033140 38.851 435 181 14 6 380 5 414 3.73e-74 243
MsG0580026298.01.T01 MTR_4g102410 40.153 391 192 14 27 379 59 445 3.83e-74 243
MsG0580026298.01.T01 MTR_2g104340 37.374 396 199 12 27 384 12 396 4.99e-73 239
MsG0580026298.01.T01 MTR_4g117550 41.147 401 165 16 17 384 11 373 7.30e-73 238
MsG0580026298.01.T01 MTR_5g096910 38.596 399 186 14 25 383 13 392 7.36e-73 238
MsG0580026298.01.T01 MTR_6g090180 38.626 422 201 13 2 379 26 433 1.97e-72 238
MsG0580026298.01.T01 MTR_6g461660 40.732 410 193 15 13 386 4 399 2.63e-72 237
MsG0580026298.01.T01 MTR_8g036970 44.538 357 135 14 33 371 2 313 2.48e-71 234
MsG0580026298.01.T01 MTR_7g069550 38.481 395 179 18 29 376 14 391 3.18e-71 234
MsG0580026298.01.T01 MTR_1g007410 39.651 401 186 17 19 377 13 399 7.42e-71 233
MsG0580026298.01.T01 MTR_5g096630 38.945 398 190 16 29 379 18 409 8.00e-71 234
MsG0580026298.01.T01 MTR_8g041270 37.313 402 200 11 27 384 13 406 9.40e-71 233
MsG0580026298.01.T01 MTR_5g092850 39.401 401 182 15 25 379 12 397 1.42e-70 233
MsG0580026298.01.T01 MTR_7g079640 40.162 371 182 14 28 375 12 365 3.10e-70 231
MsG0580026298.01.T01 MTR_4g014370 39.206 403 188 14 27 379 9 404 4.91e-70 231
MsG0580026298.01.T01 MTR_8g063370 40.761 368 183 13 33 376 28 384 9.32e-70 230
MsG0580026298.01.T01 MTR_4g055820 40.449 356 161 9 27 340 12 358 1.14e-69 229
MsG0580026298.01.T01 MTR_7g111700 39.454 403 169 14 17 384 3 365 1.20e-69 229
MsG0580026298.01.T01 MTR_6g078010 42.042 333 171 6 64 379 3 330 1.35e-69 228
MsG0580026298.01.T01 MTR_8g046200 39.243 423 170 16 27 380 14 418 3.43e-69 229
MsG0580026298.01.T01 MTR_2g104280 37.717 403 197 12 27 384 12 405 9.44e-69 228
MsG0580026298.01.T01 MTR_5g097350 39.459 370 178 14 38 376 25 379 2.76e-68 226
MsG0580026298.01.T01 MTR_2g021770 37.186 398 196 12 29 379 12 402 9.46e-68 225
MsG0580026298.01.T01 MTR_8g032980 38.322 441 191 14 5 384 1 421 1.09e-67 226
MsG0580026298.01.T01 MTR_6g090250 38.832 394 179 12 47 380 29 420 5.00e-67 224
MsG0580026298.01.T01 MTR_1g053510 38.835 412 188 15 19 380 5 402 7.63e-67 223
MsG0580026298.01.T01 MTR_2g064950 37.500 392 183 15 27 375 8 380 1.35e-66 222
MsG0580026298.01.T01 MTR_8g046220 37.530 413 184 13 22 380 10 402 5.66e-65 218
MsG0580026298.01.T01 MTR_1g050308 36.436 376 159 11 28 384 33 347 4.44e-64 214
MsG0580026298.01.T01 MTR_4g007940 39.766 342 155 11 75 376 4 334 7.74e-64 213
MsG0580026298.01.T01 MTR_5g091140 36.867 415 177 16 4 375 35 407 3.82e-63 213
MsG0580026298.01.T01 MTR_8g063310 35.878 393 206 16 17 376 10 389 2.12e-62 211
MsG0580026298.01.T01 MTR_8g033110 36.754 419 195 14 25 385 10 416 4.54e-61 208
MsG0580026298.01.T01 MTR_1g050312 42.020 307 134 14 85 376 10 287 2.52e-60 202
MsG0580026298.01.T01 MTR_8g033090 38.609 417 183 17 27 385 12 413 3.75e-60 205
MsG0580026298.01.T01 MTR_5g074850 38.010 392 186 14 19 365 25 404 5.53e-60 214
MsG0580026298.01.T01 MTR_8g063330 38.483 356 166 12 17 336 6 344 5.60e-60 206
MsG0580026298.01.T01 MTR_8g018110 37.653 409 183 15 27 385 12 398 1.39e-59 203
MsG0580026298.01.T01 MTR_7g016930 40.896 335 145 13 3 316 2 304 4.62e-59 200
MsG0580026298.01.T01 MTR_5g072060 39.523 377 152 19 27 360 4 347 2.41e-58 206
MsG0580026298.01.T01 MTR_5g075370 36.598 388 188 14 25 365 4 380 4.39e-57 205
MsG0580026298.01.T01 MTR_8g063350 37.265 373 171 15 25 377 10 339 1.91e-56 193
MsG0580026298.01.T01 MTR_1g007430 39.003 341 148 14 40 343 7 324 5.74e-56 191
MsG0580026298.01.T01 MTR_8g013000 36.896 393 176 17 27 374 8 373 6.65e-56 194
MsG0580026298.01.T01 MTR_5g064700 35.870 368 181 14 69 385 6 369 1.02e-55 192
MsG0580026298.01.T01 MTR_5g092860 36.695 357 157 14 47 361 20 349 5.08e-54 187
MsG0580026298.01.T01 MTR_6g079790 37.338 308 161 8 103 381 2 306 2.10e-53 184
MsG0580026298.01.T01 MTR_5g022850 36.504 389 167 14 27 384 14 353 1.04e-52 184
MsG0580026298.01.T01 MTR_5g096900 41.083 314 145 13 26 308 9 313 7.30e-51 178
MsG0580026298.01.T01 MTR_5g074800 35.714 350 174 15 64 376 1 336 2.72e-50 177
MsG0580026298.01.T01 MTR_7g104710 38.095 336 155 11 16 332 10 311 2.88e-50 176
MsG0580026298.01.T01 MTR_6g087620 38.411 302 143 10 92 374 2 279 3.95e-50 174
MsG0580026298.01.T01 MTR_4g014370 34.409 372 166 12 27 379 20 332 7.02e-49 173
MsG0580026298.01.T01 MTR_7g023800 36.562 320 153 9 75 375 14 302 6.02e-47 167
MsG0580026298.01.T01 MTR_5g076490 36.667 360 163 13 66 384 1 336 2.70e-46 166
MsG0580026298.01.T01 MTR_2g021920 40.426 235 109 6 173 379 37 268 2.88e-46 164
MsG0580026298.01.T01 MTR_5g094350 37.589 282 117 10 26 268 10 271 6.90e-46 163
MsG0580026298.01.T01 MTR_3g018750 40.000 245 112 8 171 384 1 241 2.81e-45 160
MsG0580026298.01.T01 MTR_6g004450 42.601 223 107 7 172 379 48 264 4.53e-45 160
MsG0580026298.01.T01 MTR_5g086590 40.506 237 116 8 143 367 15 238 6.84e-45 159
MsG0580026298.01.T01 MTR_8g033000 34.933 375 170 16 64 381 3 360 3.38e-41 153
MsG0580026298.01.T01 MTR_6g070880 42.366 262 96 12 7 224 13 263 3.89e-41 150
MsG0580026298.01.T01 MTR_6g071420 42.366 262 96 12 7 224 13 263 3.89e-41 150
MsG0580026298.01.T01 MTR_6g090260 42.408 191 99 4 198 380 73 260 4.28e-41 149
MsG0580026298.01.T01 MTR_6g090260 59.259 54 22 0 19 72 10 63 4.42e-12 67.0
MsG0580026298.01.T01 MTR_5g023970 44.086 186 97 4 198 379 9 191 9.40e-40 144
MsG0580026298.01.T01 MTR_5g097850 37.363 273 112 7 124 383 18 244 2.19e-39 144
MsG0580026298.01.T01 MTR_1g076810 42.609 230 108 9 13 220 2 229 6.88e-39 152
MsG0580026298.01.T01 MTR_5g097820 36.220 254 124 9 25 248 19 264 5.43e-38 141
MsG0580026298.01.T01 MTR_4g016000 39.904 208 96 5 145 338 1 193 2.45e-37 138
MsG0580026298.01.T01 MTR_8g073570 45.783 166 79 4 27 184 8 170 3.67e-37 135
MsG0580026298.01.T01 MTR_8g035690 37.647 255 105 9 173 383 58 302 3.14e-36 137
MsG0580026298.01.T01 MTR_6g465360 41.350 237 84 8 14 202 47 276 1.31e-35 135
MsG0580026298.01.T01 MTR_2g104260 36.496 274 127 11 29 265 14 277 4.61e-35 133
MsG0580026298.01.T01 MTR_5g037190 36.923 260 109 10 29 258 16 250 4.90e-35 132
MsG0580026298.01.T01 MTR_1g115205 37.768 233 95 8 29 237 29 235 7.74e-35 132
MsG0580026298.01.T01 MTR_7g019250 34.363 259 130 5 129 367 180 418 2.84e-33 133
MsG0580026298.01.T01 MTR_5g098950 38.318 214 90 6 143 343 90 274 3.09e-33 128
MsG0580026298.01.T01 MTR_6g009350 41.053 190 96 6 173 348 8 195 3.33e-33 125
MsG0580026298.01.T01 MTR_5g096920 40.909 154 83 4 231 381 1 149 2.26e-30 116
MsG0580026298.01.T01 MTR_5g086780 29.552 335 116 8 27 361 14 228 1.88e-29 116
MsG0580026298.01.T01 MTR_6g079730 43.662 142 72 3 245 380 7 146 3.78e-28 110
MsG0580026298.01.T01 MTR_5g066420 38.667 150 84 4 231 373 1 149 2.96e-27 107
MsG0580026298.01.T01 MTR_3g047580 48.905 137 43 5 26 155 11 127 1.61e-26 105
MsG0580026298.01.T01 MTR_7g017120 37.186 199 111 6 190 378 66 260 2.13e-26 108
MsG0580026298.01.T01 MTR_3g019290 35.780 218 71 5 15 206 4 178 4.04e-26 105
MsG0580026298.01.T01 MTR_7g017150 37.000 200 111 6 190 378 66 261 6.17e-26 107
MsG0580026298.01.T01 MTR_5g097650 45.255 137 61 6 28 158 21 149 8.07e-25 101
MsG0580026298.01.T01 MTR_5g097660 48.039 102 51 2 281 380 15 116 3.70e-24 98.2
MsG0580026298.01.T01 MTR_3g030620 36.970 165 92 4 226 381 18 179 4.35e-24 99.8
MsG0580026298.01.T01 MTR_5g097540 40.136 147 77 4 199 343 96 233 7.08e-24 102
MsG0580026298.01.T01 MTR_2g021050 26.667 315 199 9 29 333 5 297 1.34e-23 103
MsG0580026298.01.T01 MTR_0115s0020 25.320 391 240 13 29 376 10 391 4.40e-23 102
MsG0580026298.01.T01 MTR_4g133170 26.331 338 216 14 29 350 4 324 8.14e-23 101
MsG0580026298.01.T01 MTR_5g091150 34.419 215 87 11 103 293 2 186 1.50e-22 96.3
MsG0580026298.01.T01 MTR_1g050305 58.333 84 30 2 286 364 21 104 3.47e-22 93.2
MsG0580026298.01.T01 MTR_2g028130 26.064 376 228 17 26 360 2 368 6.29e-22 99.0
MsG0580026298.01.T01 MTR_5g036250 50.000 86 43 0 300 385 27 112 7.50e-22 93.6
MsG0580026298.01.T01 MTR_1g068835 26.211 351 217 15 29 357 4 334 2.62e-21 96.7
MsG0580026298.01.T01 MTR_3g009310 27.564 312 192 12 29 328 42 331 3.76e-21 96.3
MsG0580026298.01.T01 MTR_1g097560 28.529 340 211 13 29 358 36 353 1.05e-20 94.7
MsG0580026298.01.T01 MTR_0667s0010 27.419 310 198 11 29 320 6 306 3.87e-20 93.2
MsG0580026298.01.T01 MTR_1g047080 28.916 332 168 14 64 381 3 280 6.57e-20 90.9
MsG0580026298.01.T01 MTR_2g022020 43.137 102 57 1 278 379 15 115 1.12e-19 85.1
MsG0580026298.01.T01 MTR_4g023090 26.989 352 216 13 5 341 1 326 1.65e-19 91.3
MsG0580026298.01.T01 MTR_1g097490 26.822 343 216 13 29 358 49 369 2.52e-19 90.9
MsG0580026298.01.T01 MTR_1g097330 26.801 347 222 15 29 360 16 345 3.19e-19 90.5
MsG0580026298.01.T01 MTR_5g011200 28.116 345 188 16 29 346 17 328 3.28e-19 90.1
MsG0580026298.01.T01 MTR_1g094210 27.954 347 203 14 29 356 57 375 4.86e-19 90.1
MsG0580026298.01.T01 MTR_5g096070 34.783 161 76 6 26 181 23 159 5.10e-19 84.7
MsG0580026298.01.T01 MTR_2g021150 27.811 338 208 15 28 345 13 334 6.46e-19 89.4
MsG0580026298.01.T01 MTR_4g021785 25.275 364 234 13 28 378 8 346 7.42e-19 89.0
MsG0580026298.01.T01 MTR_2g046900 27.838 370 216 18 21 358 15 365 1.08e-18 88.6
MsG0580026298.01.T01 MTR_2g426060 26.582 316 199 14 29 320 6 312 1.40e-18 88.6
MsG0580026298.01.T01 MTR_3g036335 26.836 354 225 13 7 347 17 349 2.76e-18 87.4
MsG0580026298.01.T01 MTR_1g094210 26.944 360 211 15 29 364 57 388 3.13e-18 87.8
MsG0580026298.01.T01 MTR_1g442850 29.968 317 187 16 27 321 3 306 3.73e-18 87.0
MsG0580026298.01.T01 MTR_2g046920 28.481 316 183 15 28 326 23 312 3.98e-18 87.0
MsG0580026298.01.T01 MTR_4g019990 27.523 327 194 15 26 321 3 317 5.33e-18 86.7
MsG0580026298.01.T01 MTR_2g046830 28.571 336 193 16 16 327 2 314 6.44e-18 86.7
MsG0580026298.01.T01 MTR_0044s0300 27.385 325 208 11 5 320 14 319 6.45e-18 86.3
MsG0580026298.01.T01 MTR_7g101200 32.701 211 109 9 143 342 40 228 6.84e-18 83.6
MsG0580026298.01.T01 MTR_3g083010 24.478 335 210 14 29 330 6 330 7.56e-18 86.7
MsG0580026298.01.T01 MTR_2g028160 26.380 326 199 13 26 320 2 317 8.38e-18 86.3
MsG0580026298.01.T01 MTR_2g055970 26.822 343 213 16 28 352 210 532 8.82e-18 87.0
MsG0580026298.01.T01 MTR_8g101580 25.882 340 212 16 37 357 54 372 1.15e-17 85.9
MsG0580026298.01.T01 MTR_4g024890 26.158 367 225 15 27 357 8 364 1.19e-17 85.5
MsG0580026298.01.T01 MTR_3g013770 28.693 352 181 15 29 347 33 347 1.22e-17 85.5
MsG0580026298.01.T01 MTR_1g088120 24.479 384 238 11 28 366 9 385 1.50e-17 85.5
MsG0580026298.01.T01 MTR_1g068875 26.479 355 210 19 29 357 4 333 1.72e-17 85.1
MsG0580026298.01.T01 MTR_4g023080 25.485 361 236 12 28 378 8 345 1.93e-17 84.3
MsG0580026298.01.T01 MTR_5g048160 23.773 387 250 13 29 376 4 384 1.96e-17 85.1
MsG0580026298.01.T01 MTR_2g047832 26.346 353 219 13 1 327 1 338 1.96e-17 85.1
MsG0580026298.01.T01 MTR_7g070440 26.254 339 213 14 27 340 5 331 1.97e-17 84.7
MsG0580026298.01.T01 MTR_1g054575 28.431 306 173 14 29 317 52 328 2.14e-17 86.3
MsG0580026298.01.T01 MTR_1g068860 24.642 349 233 14 29 360 4 339 2.43e-17 84.3
MsG0580026298.01.T01 MTR_3g014570 27.213 305 193 11 29 321 29 316 2.99e-17 84.3
MsG0580026298.01.T01 MTR_2g028110 25.284 352 227 18 29 360 4 339 4.68e-17 83.6
MsG0580026298.01.T01 MTR_2g025420 24.925 333 212 13 29 330 6 331 5.47e-17 84.0
MsG0580026298.01.T01 MTR_4g094365 26.075 372 239 15 28 382 7 359 5.53e-17 83.2
MsG0580026298.01.T01 MTR_7g055870 25.862 348 198 12 31 328 15 352 2.06e-16 82.0
MsG0580026298.01.T01 MTR_2g024110 25.155 322 198 15 29 330 4 302 2.87e-16 81.3
MsG0580026298.01.T01 MTR_3g007360 26.769 325 198 11 37 340 60 365 2.93e-16 81.6
MsG0580026298.01.T01 MTR_1g037540 27.381 336 183 14 32 319 8 330 2.98e-16 81.3
MsG0580026298.01.T01 MTR_2g425980 25.157 318 208 9 26 320 2 312 3.22e-16 81.3
MsG0580026298.01.T01 MTR_7g055930 26.957 345 198 13 31 328 15 352 5.38e-16 80.9
MsG0580026298.01.T01 MTR_3g047540 50.588 85 35 4 199 283 5 82 5.55e-16 73.9
MsG0580026298.01.T01 MTR_2g026010 26.861 309 194 14 29 320 4 297 5.69e-16 80.5
MsG0580026298.01.T01 MTR_3g014540 26.648 349 209 13 29 357 29 350 6.06e-16 80.5
MsG0580026298.01.T01 MTR_7g056820 25.360 347 217 14 29 346 7 340 7.09e-16 80.1
MsG0580026298.01.T01 MTR_2g426020 26.433 314 197 14 29 320 6 307 9.59e-16 79.7
MsG0580026298.01.T01 MTR_1g050542 25.068 367 242 13 6 358 34 381 1.05e-15 79.7
MsG0580026298.01.T01 MTR_7g066000 26.271 354 218 15 28 357 24 358 1.09e-15 79.7
MsG0580026298.01.T01 MTR_7g407070 25.439 342 216 12 29 341 32 363 1.11e-15 79.7
MsG0580026298.01.T01 MTR_2g426070 22.590 363 239 12 30 360 7 359 1.14e-15 79.7
MsG0580026298.01.T01 MTR_5g070080 25.635 394 238 16 28 384 9 384 1.27e-15 79.3
MsG0580026298.01.T01 MTR_3g013740 24.839 310 204 9 29 320 44 342 1.62e-15 79.3
MsG0580026298.01.T01 MTR_4g094400 40.909 110 47 3 225 318 4 111 1.76e-15 73.6
MsG0580026298.01.T01 MTR_7g060960 26.923 312 181 13 21 321 24 299 1.98e-15 78.6
MsG0580026298.01.T01 MTR_3g007410 26.462 325 199 11 37 340 60 365 2.66e-15 78.6
MsG0580026298.01.T01 MTR_0128s0020 24.860 358 231 11 29 355 18 368 3.15e-15 78.2
MsG0580026298.01.T01 MTR_0267s0050 24.259 371 226 14 37 366 14 370 3.53e-15 78.2
MsG0580026298.01.T01 MTR_5g096050 41.346 104 50 4 231 323 1 104 3.80e-15 72.4
MsG0580026298.01.T01 MTR_8g041440 42.857 98 48 2 26 115 12 109 4.08e-15 72.4
MsG0580026298.01.T01 MTR_3g030330 27.492 331 202 15 29 347 20 324 4.28e-15 77.8
MsG0580026298.01.T01 MTR_2g031720 23.315 356 243 14 29 370 6 345 4.72e-15 77.8
MsG0580026298.01.T01 MTR_7g052150 25.298 336 203 13 13 321 6 320 4.74e-15 77.8
MsG0580026298.01.T01 MTR_3g464500 26.647 334 189 15 21 321 19 329 4.75e-15 77.8
MsG0580026298.01.T01 MTR_4g055060 25.959 339 208 14 29 347 30 345 5.54e-15 77.4
MsG0580026298.01.T01 MTR_4g030830 25.654 382 222 17 27 361 7 373 6.54e-15 77.4
MsG0580026298.01.T01 MTR_1g071010 26.518 313 200 12 30 321 16 319 8.41e-15 77.0
MsG0580026298.01.T01 MTR_3g464470 26.243 362 216 17 24 350 2 347 8.61e-15 76.6
MsG0580026298.01.T01 MTR_8g073550 29.592 196 118 5 28 213 29 214 1.07e-14 74.3
MsG0580026298.01.T01 MTR_7g060940 25.876 371 214 16 29 359 22 371 1.29e-14 76.3
MsG0580026298.01.T01 MTR_5g057790 28.713 303 187 12 29 320 46 330 1.71e-14 75.9
MsG0580026298.01.T01 MTR_7g062100 27.640 322 191 18 21 317 16 320 1.81e-14 75.9
MsG0580026298.01.T01 MTR_5g057710 27.628 333 205 12 29 341 46 362 1.81e-14 75.9
MsG0580026298.01.T01 MTR_3g034130 26.257 358 224 16 25 358 5 346 2.15e-14 75.5
MsG0580026298.01.T01 MTR_4g080200 28.326 233 127 10 31 245 5 215 2.61e-14 75.1
MsG0580026298.01.T01 MTR_4g030110 25.700 393 209 17 17 360 18 376 3.78e-14 74.7
MsG0580026298.01.T01 MTR_4g116340 27.600 250 139 9 5 239 12 234 4.79e-14 72.8
MsG0580026298.01.T01 MTR_3g013950 24.731 372 225 15 37 366 14 372 5.10e-14 74.3
MsG0580026298.01.T01 MTR_2g078900 26.087 299 196 11 29 320 33 313 5.36e-14 73.9
MsG0580026298.01.T01 MTR_7g091640 27.500 320 194 16 28 320 34 342 7.31e-14 73.9
MsG0580026298.01.T01 MTR_3g058470 24.444 360 197 15 29 359 37 350 8.05e-14 73.6
MsG0580026298.01.T01 MTR_4g061340 25.532 329 209 13 29 340 26 335 9.90e-14 73.6
MsG0580026298.01.T01 MTR_6g016285 25.773 388 223 18 29 361 21 398 1.08e-13 73.9
MsG0580026298.01.T01 MTR_7g056570 27.302 315 190 16 28 321 17 313 1.14e-13 73.6
MsG0580026298.01.T01 MTR_0464s0020 25.074 339 187 14 31 321 25 344 1.31e-13 73.6
MsG0580026298.01.T01 MTR_8g099460 25.484 310 200 11 29 320 5 301 1.80e-13 72.8
MsG0580026298.01.T01 MTR_1g023400 25.904 332 220 12 32 351 6 323 2.18e-13 72.0
MsG0580026298.01.T01 MTR_7g066840 26.498 317 197 11 29 321 23 327 2.71e-13 72.4
MsG0580026298.01.T01 MTR_2g031680 25.157 318 202 14 29 331 6 302 3.32e-13 72.0
MsG0580026298.01.T01 MTR_4g116330 25.654 382 245 17 13 378 13 371 3.32e-13 72.0
MsG0580026298.01.T01 MTR_6g053260 26.623 308 199 13 26 320 331 624 3.76e-13 72.8
MsG0580026298.01.T01 MTR_4g033495 25.654 382 229 17 23 362 21 389 4.04e-13 72.0
MsG0580026298.01.T01 MTR_6g048140 25.882 340 205 14 29 347 39 352 5.26e-13 71.6
MsG0580026298.01.T01 MTR_0128s0070 25.321 312 198 10 29 318 22 320 5.40e-13 71.2
MsG0580026298.01.T01 MTR_7g055850 28.125 192 108 5 31 193 15 205 5.61e-13 70.1
MsG0580026298.01.T01 MTR_2g025960 25.114 219 143 8 119 320 1 215 6.88e-13 70.1
MsG0580026298.01.T01 MTR_7g055977 23.980 392 237 17 28 377 6 378 7.81e-13 70.9
MsG0580026298.01.T01 MTR_0649s0020 27.536 276 155 11 27 271 9 270 8.88e-13 70.5
MsG0580026298.01.T01 MTR_7g061090 25.294 340 198 14 21 321 14 336 9.65e-13 70.5
MsG0580026298.01.T01 MTR_7g035295 26.688 311 182 10 37 328 24 307 9.79e-13 70.5
MsG0580026298.01.T01 MTR_6g065980 26.073 303 181 12 29 320 16 286 1.11e-12 70.1
MsG0580026298.01.T01 MTR_6g087660 51.282 78 32 2 13 84 2 79 1.14e-12 67.4
MsG0580026298.01.T01 MTR_1g055135 25.984 381 226 17 28 378 12 366 1.23e-12 70.1
MsG0580026298.01.T01 MTR_7g050480 26.023 342 195 17 10 320 2 316 1.40e-12 70.1
MsG0580026298.01.T01 MTR_4g024870 28.139 231 144 11 30 246 45 267 1.58e-12 70.1
MsG0580026298.01.T01 MTR_5g057690 27.632 304 179 11 29 320 46 320 2.38e-12 69.3
MsG0580026298.01.T01 MTR_5g096710 28.627 255 149 12 29 260 23 267 2.45e-12 69.3
MsG0580026298.01.T01 MTR_4g023440 27.049 244 148 8 5 239 1 223 2.76e-12 68.6
MsG0580026298.01.T01 MTR_2g031700 27.984 243 146 11 29 261 6 229 2.88e-12 68.2
MsG0580026298.01.T01 MTR_5g057020 27.243 301 179 12 29 320 46 315 3.30e-12 68.6
MsG0580026298.01.T01 MTR_7g023950 25.373 268 153 13 124 376 15 250 3.70e-12 67.4
MsG0580026298.01.T01 MTR_4g011660 27.811 338 198 14 20 318 10 340 4.45e-12 68.6
MsG0580026298.01.T01 MTR_5g069760 22.508 311 216 10 25 321 2 301 4.91e-12 68.2
MsG0580026298.01.T01 MTR_6g048120 24.556 338 218 10 29 347 36 355 5.75e-12 68.2
MsG0580026298.01.T01 MTR_3g103020 25.137 366 244 15 28 378 19 369 6.10e-12 67.8
MsG0580026298.01.T01 MTR_4g122850 23.120 359 235 13 40 372 12 355 9.11e-12 67.4
MsG0580026298.01.T01 MTR_0128s0010 26.190 252 159 9 29 260 21 265 9.26e-12 67.4
MsG0580026298.01.T01 MTR_2g047892 24.695 328 183 14 29 318 22 323 9.64e-12 67.4
MsG0580026298.01.T01 MTR_7g066850 25.776 322 189 16 29 321 23 323 1.18e-11 67.4
MsG0580026298.01.T01 MTR_3g006670 25.641 312 188 11 29 320 49 336 1.19e-11 67.4
MsG0580026298.01.T01 MTR_7g077070 24.119 369 215 14 29 341 16 375 1.25e-11 67.4
MsG0580026298.01.T01 MTR_3g007300 25.786 318 191 14 29 341 49 326 1.27e-11 67.0
MsG0580026298.01.T01 MTR_3g010590 24.620 329 196 12 8 320 18 310 1.42e-11 67.0
MsG0580026298.01.T01 MTR_1g022200 25.291 344 200 13 32 347 18 332 1.43e-11 67.0
MsG0580026298.01.T01 MTR_4g023380 24.096 415 235 17 5 382 1 372 1.64e-11 66.6
MsG0580026298.01.T01 MTR_3g024110 25.904 332 201 15 29 347 101 400 1.94e-11 66.6
MsG0580026298.01.T01 MTR_7g056717 28.571 308 179 15 36 321 29 317 2.06e-11 66.2
MsG0580026298.01.T01 MTR_4g117780 25.074 339 214 12 29 345 11 331 2.30e-11 66.2
MsG0580026298.01.T01 MTR_7g050520 25.439 342 197 17 10 320 2 316 2.36e-11 66.2
MsG0580026298.01.T01 MTR_4g013185 25.882 340 198 11 27 321 8 338 2.60e-11 66.2
MsG0580026298.01.T01 MTR_6g055210 28.070 342 198 19 13 320 7 334 2.83e-11 66.2
MsG0580026298.01.T01 MTR_7g056200 26.437 348 197 18 8 329 2 316 3.45e-11 65.9
MsG0580026298.01.T01 MTR_7g056003 26.409 337 194 14 20 321 6 323 4.33e-11 65.5
MsG0580026298.01.T01 MTR_3g006570 24.096 332 215 13 29 347 21 328 6.85e-11 64.7
MsG0580026298.01.T01 MTR_3g083640 27.243 301 183 14 29 317 55 331 6.88e-11 64.7
MsG0580026298.01.T01 MTR_5g068040 25.796 314 183 17 31 321 18 304 7.59e-11 64.7
MsG0580026298.01.T01 MTR_1g115185 25.532 329 210 12 8 320 17 326 7.83e-11 64.7
MsG0580026298.01.T01 MTR_7g056737 27.358 318 186 15 28 321 21 317 8.08e-11 64.7
MsG0580026298.01.T01 MTR_3g072470 26.100 341 195 17 20 321 10 332 8.20e-11 64.7
MsG0580026298.01.T01 MTR_4g121580 26.872 227 142 6 28 237 10 229 8.29e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026298.01.T01 AT2G03420 48.718 117 59 1 457 573 10 125 1.02e-25 104
MsG0580026298.01.T01 AT3G06240 24.878 410 232 18 5 361 12 398 7.11e-20 92.8
MsG0580026298.01.T01 AT4G22390 25.316 237 140 10 106 320 78 299 6.06e-13 71.2
MsG0580026298.01.T01 AT4G22390 25.316 237 140 10 106 320 78 299 6.55e-13 71.2
MsG0580026298.01.T01 AT2G21930 22.917 336 231 11 5 329 1 319 7.73e-13 70.9
MsG0580026298.01.T01 AT5G15660 24.925 333 209 13 11 322 3 315 8.53e-13 71.2
MsG0580026298.01.T01 AT4G12560 22.983 409 268 17 29 409 4 393 9.09e-12 67.8
MsG0580026298.01.T01 AT4G12560 22.983 409 268 17 29 409 4 393 9.09e-12 67.8
MsG0580026298.01.T01 AT4G12560 22.983 409 268 17 29 409 4 393 9.09e-12 67.8
MsG0580026298.01.T01 AT3G57590 24.545 220 150 6 29 243 4 212 7.44e-11 64.7

Find 109 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTTGTTACTTTCTTTC+TGG 0.130006 5:-34327424 MsG0580026298.01.T01:CDS
CACCGCGCCGCGCCAATTAT+TGG 0.162214 5:+34326496 None:intergenic
TGGACCTTTGTCTTGTATTA+TGG 0.170438 5:-34326729 MsG0580026298.01.T01:CDS
TGTTACACCTTTACCCTTCT+TGG 0.244736 5:-34326900 MsG0580026298.01.T01:CDS
AGACTATATATCTCCCAAAA+AGG 0.246484 5:+34327097 None:intergenic
ATATCAATCTTGGGTGAAAT+TGG 0.271496 5:-34326785 MsG0580026298.01.T01:CDS
TTTACCCTTCTTGGAAGATA+TGG 0.272468 5:-34326891 MsG0580026298.01.T01:CDS
AAGAAAAGCAAACTTCCTTT+TGG 0.272526 5:-34326569 MsG0580026298.01.T01:CDS
GGCACCGCCAACCCAATAAT+TGG 0.286325 5:-34326508 MsG0580026298.01.T01:CDS
ACCGCGCCGCGCCAATTATT+GGG 0.290466 5:+34326497 None:intergenic
AATGGGGTCTGTCATTGGTT+AGG 0.291445 5:-34326995 MsG0580026298.01.T01:CDS
ACGAACATGTCCATGAAAAT+AGG 0.295522 5:+34327502 None:intergenic
CCCTTCTTCCATACTATGAT+AGG 0.304248 5:+34326704 None:intergenic
GTCTGATATTACAACTGAAT+TGG 0.338477 5:-34327200 MsG0580026298.01.T01:CDS
CTGCATTAAAGCATGGTAAA+AGG 0.338713 5:+34322437 None:intergenic
CTTCTATTGCAATTCTTCTC+TGG 0.348974 5:-34322479 MsG0580026298.01.T01:CDS
CCTCCACAACATCCACATAT+TGG 0.368422 5:+34327128 None:intergenic
AATGGCATTCTTTGTGTCAT+TGG 0.374995 5:-34327313 MsG0580026298.01.T01:CDS
AGAAGCTCACCACGACTAAC+AGG 0.384672 5:+34327223 None:intergenic
CCTCAAAAGAAGGTTCAGTT+TGG 0.387035 5:-34322588 MsG0580026298.01.T01:CDS
AAGCGTTTGATAGATTTAAC+AGG 0.387935 5:+34327565 None:intergenic
AGAAGGGAAATATACTTGTT+AGG 0.393034 5:-34326688 MsG0580026298.01.T01:CDS
CGCGCCAATTATTGGGTTGG+CGG 0.405631 5:+34326504 None:intergenic
CATGATGATGATGATTGGTT+TGG 0.414757 5:+34322671 None:intergenic
TTATGGATCCTATCATAGTA+TGG 0.418016 5:-34326712 MsG0580026298.01.T01:CDS
TCTCTTGTGTTCGTAGATCA+TGG 0.428333 5:-34327543 MsG0580026298.01.T01:CDS
TGAGAAGTTCAATATGGTTA+TGG 0.432859 5:-34326954 MsG0580026298.01.T01:CDS
ATAGGGATGTGTACTTGAAT+GGG 0.435628 5:-34327012 MsG0580026298.01.T01:CDS
TAACGATGAGAAGTTCAATA+TGG 0.439165 5:-34326960 MsG0580026298.01.T01:CDS
TGAAACCATTAAAACGTTTG+AGG 0.439460 5:+34321939 None:intergenic
TCCGGCTACTGAGGAAGTTA+AGG 0.439895 5:-34327251 MsG0580026298.01.T01:CDS
AAGTCAATCTGAGGCAGCTC+AGG 0.441780 5:+34321962 None:intergenic
GTTGTGGAGTGTATGCAAAT+AGG 0.447449 5:-34327030 MsG0580026298.01.T01:CDS
TCAAACTCTGGAGTATGAAA+TGG 0.447724 5:+34327361 None:intergenic
GTTAAGCTGCAGGTGTTCAA+TGG 0.450895 5:-34326854 MsG0580026298.01.T01:CDS
CGCCGCGCCAATTATTGGGT+TGG 0.452770 5:+34326501 None:intergenic
ACTTGAATGGGGTCTGTCAT+TGG 0.453064 5:-34327000 MsG0580026298.01.T01:CDS
ACAGGACTAGAGTCTGTTCC+TGG 0.456712 5:-34321986 MsG0580026298.01.T01:CDS
TGGTAAAAGGTTACTTTACC+TGG 0.463597 5:+34322450 None:intergenic
AAATTGGTGTCAAGGAATCA+TGG 0.466955 5:-34326769 MsG0580026298.01.T01:CDS
ATGGGGTCTGTCATTGGTTA+GGG 0.470365 5:-34326994 MsG0580026298.01.T01:CDS
ATAGAGAAATGAATGTCATC+AGG 0.472991 5:+34327601 None:intergenic
TTGTGGAGTGTATGCAAATA+GGG 0.474883 5:-34327029 MsG0580026298.01.T01:CDS
ATCTCAATGGTATCAAACTC+TGG 0.478902 5:+34327349 None:intergenic
AATAGGGATGTGTACTTGAA+TGG 0.480514 5:-34327013 MsG0580026298.01.T01:CDS
GTAAGAATGATGAGAAGATA+AGG 0.480601 5:+34322533 None:intergenic
CAAACCAATCATCATCATCA+TGG 0.480934 5:-34322670 MsG0580026298.01.T01:CDS
CAGTACTATACTACTGAATC+CGG 0.485337 5:-34327269 MsG0580026298.01.T01:CDS
CAGAGGTCTATAACTCCAAA+AGG 0.486375 5:+34326554 None:intergenic
ACCTTAACTTCCTCAGTAGC+CGG 0.491864 5:+34327250 None:intergenic
GGTTATGGTGTCATTTCACT+TGG 0.494169 5:-34326939 MsG0580026298.01.T01:CDS
GTGTCAAGGAATCATGGGTT+AGG 0.498313 5:-34326763 MsG0580026298.01.T01:CDS
CGGATTCAGTAGTATAGTAC+TGG 0.501545 5:+34327270 None:intergenic
GAACCCATGATGATGATGAT+TGG 0.506344 5:+34322666 None:intergenic
TCCTATCATAGTATGGAAGA+AGG 0.509437 5:-34326705 MsG0580026298.01.T01:CDS
TTTAACTACCGGGATGATTG+AGG 0.510921 5:-34326636 MsG0580026298.01.T01:CDS
TTAAGCTGCAGGTGTTCAAT+GGG 0.516254 5:-34326853 MsG0580026298.01.T01:CDS
GCACATGCTGGATTCATGTC+AGG 0.519014 5:-34322013 MsG0580026298.01.T01:CDS
ACCGGGATGATTGAGGAGAT+TGG 0.521924 5:-34326629 MsG0580026298.01.T01:CDS
ATCTGAGGCAGCTCAGGACC+AGG 0.523597 5:+34321968 None:intergenic
CTTGGGTGAAATTGGTGTCA+AGG 0.531695 5:-34326777 MsG0580026298.01.T01:CDS
GTTAGTAATAGTAATGGTAA+TGG 0.532915 5:-34327634 MsG0580026298.01.T01:CDS
ATATCTTCCAAGAAGGGTAA+AGG 0.533483 5:+34326893 None:intergenic
ATTCTTCTCTGGTCAACTCC+AGG 0.534134 5:-34322468 MsG0580026298.01.T01:CDS
AATTGAACCTAAAATCTCAA+TGG 0.535852 5:+34327336 None:intergenic
TGTGGATGTTGTGGAGGGTA+AGG 0.536846 5:-34327122 MsG0580026298.01.T01:CDS
ACTGAGCAATCCTCAAAAGA+AGG 0.537649 5:-34322598 MsG0580026298.01.T01:CDS
GTGGAAATCTGAATGAAAGA+TGG 0.538239 5:+34322633 None:intergenic
TGCCGCGCCGCATTTCTGCA+TGG 0.544475 5:+34326527 None:intergenic
TTATAAAGTCATCCAATATG+TGG 0.548315 5:-34327140 MsG0580026298.01.T01:CDS
GGATTCATGTCAGGAATCAC+AGG 0.551319 5:-34322004 MsG0580026298.01.T01:CDS
CGCCAACCCAATAATTGGCG+CGG 0.554614 5:-34326503 MsG0580026298.01.T01:CDS
TGGGTTAGGCTATTTGACAT+TGG 0.557333 5:-34326749 MsG0580026298.01.T01:CDS
CATTGTCATAGCCAAATCCA+TGG 0.558394 5:+34327173 None:intergenic
AATTGGTGTCAAGGAATCAT+GGG 0.570968 5:-34326768 MsG0580026298.01.T01:CDS
ACCCAATAATTGGCGCGGCG+CGG 0.573878 5:-34326498 MsG0580026298.01.T01:intron
ATATTCCATATCTTCCAAGA+AGG 0.574725 5:+34326886 None:intergenic
TTCAAGCAGTTTCTTCACAA+GGG 0.574802 5:+34321772 None:intergenic
GTCATTTCACTTGGGCAATG+AGG 0.575374 5:-34326930 MsG0580026298.01.T01:CDS
AATGAAAGATGGTAATGAAG+AGG 0.576236 5:+34322644 None:intergenic
CCTATCATAGTATGGAAGAA+GGG 0.577442 5:-34326704 MsG0580026298.01.T01:CDS
TATTCCATATCTTCCAAGAA+GGG 0.578744 5:+34326887 None:intergenic
TCTGGAGTATGAAATGGAGG+TGG 0.584850 5:+34327367 None:intergenic
ACCAATCTCCTCAATCATCC+CGG 0.584981 5:+34326628 None:intergenic
GCATACACTCCACAACGGAC+TGG 0.586236 5:+34327037 None:intergenic
AAACCAATCATCATCATCAT+GGG 0.587744 5:-34322669 MsG0580026298.01.T01:CDS
GTTCAAGCAGTTTCTTCACA+AGG 0.588394 5:+34321771 None:intergenic
AACTCTGGAGTATGAAATGG+AGG 0.595596 5:+34327364 None:intergenic
ACTACTGAATCCGGCTACTG+AGG 0.598679 5:-34327260 MsG0580026298.01.T01:CDS
GAGGAGGTTAGTAATAGTAA+TGG 0.603720 5:-34327640 MsG0580026298.01.T01:CDS
GTTATGGTGTCATTTCACTT+GGG 0.606325 5:-34326938 MsG0580026298.01.T01:CDS
CATCCAATATGTGGATGTTG+TGG 0.606660 5:-34327131 MsG0580026298.01.T01:CDS
ATTGATATGCCAGTCCGTTG+TGG 0.611412 5:-34327046 MsG0580026298.01.T01:CDS
TCAAGCAGTTTCTTCACAAG+GGG 0.613634 5:+34321773 None:intergenic
CCAATATGTGGATGTTGTGG+AGG 0.615064 5:-34327128 MsG0580026298.01.T01:CDS
AAGGTGCTTCCTGTTAGTCG+TGG 0.622204 5:-34327232 MsG0580026298.01.T01:CDS
CTGTTGTCCATGCAGAAATG+CGG 0.646732 5:-34326534 MsG0580026298.01.T01:CDS
ATACTGATTTAAAATGAGAG+AGG 0.649169 5:+34327450 None:intergenic
ATTGGTGACATTATACACGT+TGG 0.652219 5:-34327295 MsG0580026298.01.T01:CDS
CATTGGTTAGGGCAAGCAGA+AGG 0.653173 5:-34326983 MsG0580026298.01.T01:CDS
TAGGGATGTGTACTTGAATG+GGG 0.654549 5:-34327011 MsG0580026298.01.T01:CDS
CGTTTGAGGAAGTCAATCTG+AGG 0.656409 5:+34321953 None:intergenic
ATTGCAATAGAAGCAGCCAA+AGG 0.674848 5:+34322489 None:intergenic
CATTTCTGCATGGACAACAG+AGG 0.678895 5:+34326537 None:intergenic
GGATCCATAATACAAGACAA+AGG 0.682913 5:+34326725 None:intergenic
CAATATGTGGATGTTGTGGA+GGG 0.684027 5:-34327127 MsG0580026298.01.T01:CDS
TTGCATGCTGCATTAAAGCA+TGG 0.695573 5:+34322430 None:intergenic
GTCCATGCAGAAATGCGGCG+CGG 0.715781 5:-34326529 MsG0580026298.01.T01:CDS
TATTTGCATACACTCCACAA+CGG 0.758850 5:+34327032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTCTTCAAAATTT+AGG + Chr5:34326187-34326206 None:intergenic 10.0%
!! AAAAAATTCTTCAAAATTTA+GGG + Chr5:34326186-34326205 None:intergenic 10.0%
!! AAATGTATTTAATATATTGA+AGG + Chr5:34326074-34326093 None:intergenic 10.0%
!! AAGATAATAAAATATGAATT+GGG - Chr5:34326458-34326477 MsG0580026298.01.T01:intron 10.0%
!! TAAGATAATAAAATATGAAT+TGG - Chr5:34326457-34326476 MsG0580026298.01.T01:intron 10.0%
!!! TTTTAGAATAAATATGTTTT+TGG + Chr5:34326381-34326400 None:intergenic 10.0%
!! ATTATTAGTCAACATTTATA+AGG + Chr5:34324511-34324530 None:intergenic 15.0%
!! TTTAGATATTAAAAGAATGT+TGG - Chr5:34326293-34326312 MsG0580026298.01.T01:intron 15.0%
!!! AGTTTCATTTTATGAAATTT+AGG + Chr5:34327557-34327576 None:intergenic 15.0%
!!! TAATGTTTCTAATTTAATCA+GGG + Chr5:34326423-34326442 None:intergenic 15.0%
!!! TACTTTTAAATTTAAACCTA+TGG + Chr5:34326511-34326530 None:intergenic 15.0%
!!! TATTTTCTCAATTTAACTAA+TGG - Chr5:34323747-34323766 MsG0580026298.01.T01:intron 15.0%
!! AACAAATAAGAAGAAAAAGA+AGG - Chr5:34321768-34321787 MsG0580026298.01.T01:CDS 20.0%
!! AATTATCCAAATTCGATATT+TGG + Chr5:34324654-34324673 None:intergenic 20.0%
!! ACAAATAAGAAGAAAAAGAA+GGG - Chr5:34321769-34321788 MsG0580026298.01.T01:CDS 20.0%
!! ACTAAATTGATTAACATAAG+AGG - Chr5:34325862-34325881 MsG0580026298.01.T01:intron 20.0%
!! ACTATTGACAAATATATTGA+AGG - Chr5:34325957-34325976 MsG0580026298.01.T01:intron 20.0%
!! AGATTGAAAAATGTTTAAGA+TGG - Chr5:34323596-34323615 MsG0580026298.01.T01:intron 20.0%
!! ATCCTTTATACATAATACAT+AGG - Chr5:34324243-34324262 MsG0580026298.01.T01:intron 20.0%
!! CAAAATTAAACAACTTAAAG+AGG + Chr5:34325352-34325371 None:intergenic 20.0%
!! CAGCAAATAATTCAAATTAT+CGG + Chr5:34323985-34324004 None:intergenic 20.0%
!! CAGCAAATAATTCAAATTAT+TGG + Chr5:34323985-34324004 None:intergenic 20.0%
!! CTTTAATTCTTAAGAATCAT+AGG + Chr5:34327301-34327320 None:intergenic 20.0%
!! TATTATGTTAATGCAAACAT+TGG + Chr5:34324608-34324627 None:intergenic 20.0%
!! TATTTCTTACTTATCTTCTT+TGG + Chr5:34325628-34325647 None:intergenic 20.0%
!! TCTAAACACATAATTGAATT+AGG + Chr5:34326279-34326298 None:intergenic 20.0%
!! TTAAATGTAGTATATGAAAC+AGG - Chr5:34323711-34323730 MsG0580026298.01.T01:intron 20.0%
!! TTATGATTATTATTTCACAG+AGG - Chr5:34327590-34327609 MsG0580026298.01.T01:CDS 20.0%
!!! AAATGAGTAAATCATCATTT+TGG - Chr5:34325743-34325762 MsG0580026298.01.T01:intron 20.0%
!!! AGTATTGACGAAAAAAAATT+TGG - Chr5:34326160-34326179 MsG0580026298.01.T01:intron 20.0%
!!! ATATGTTCTAGGTTTATTAA+GGG - Chr5:34325042-34325061 MsG0580026298.01.T01:intron 20.0%
!!! ATTGATTCAAGATATTGAAT+TGG - Chr5:34325379-34325398 MsG0580026298.01.T01:intron 20.0%
!!! ATTTGAAAATCCTATTTTCA+TGG - Chr5:34321921-34321940 MsG0580026298.01.T01:intron 20.0%
!!! GTAATGTTTCTAATTTAATC+AGG + Chr5:34326424-34326443 None:intergenic 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + Chr5:34322991-34323010 None:intergenic 20.0%
!!! TATATGTTCTAGGTTTATTA+AGG - Chr5:34325041-34325060 MsG0580026298.01.T01:intron 20.0%
!!! TCTATTTTGAGTAATGTTTA+AGG + Chr5:34323021-34323040 None:intergenic 20.0%
!!! TTAAAGATTTTGTAATTCGA+TGG - Chr5:34324776-34324795 MsG0580026298.01.T01:intron 20.0%
! AAATAAGAAGAAAAAGAAGG+GGG - Chr5:34321771-34321790 MsG0580026298.01.T01:CDS 25.0%
! AACTCAATTTCATCTTTCAA+TGG + Chr5:34325676-34325695 None:intergenic 25.0%
! AATCACTTCAAAGTACATAA+AGG + Chr5:34323809-34323828 None:intergenic 25.0%
! AATTGAACCTAAAATCTCAA+TGG + Chr5:34322100-34322119 None:intergenic 25.0%
! AGGTTCATACTTCATATATA+TGG - Chr5:34325277-34325296 MsG0580026298.01.T01:intron 25.0%
! CAAATAAGAAGAAAAAGAAG+GGG - Chr5:34321770-34321789 MsG0580026298.01.T01:CDS 25.0%
! CACCTATGTATTATGTATAA+AGG + Chr5:34324248-34324267 None:intergenic 25.0%
! CATAGGTACTAAAATATACA+TGG - Chr5:34323359-34323378 MsG0580026298.01.T01:intron 25.0%
! GTTAGTAATAGTAATGGTAA+TGG - Chr5:34321799-34321818 MsG0580026298.01.T01:CDS 25.0%
! TAAATACAGATCAAAACTTC+AGG - Chr5:34323649-34323668 MsG0580026298.01.T01:intron 25.0%
! TCATAATATGAATTGTCATG+AGG - Chr5:34323177-34323196 MsG0580026298.01.T01:intron 25.0%
! TGTATTTAAACTATGTTCCT+TGG + Chr5:34323637-34323656 None:intergenic 25.0%
! TTATAAAGTCATCCAATATG+TGG - Chr5:34322293-34322312 MsG0580026298.01.T01:intron 25.0%
!! AAGAGTAACTAGTTTCTAAA+AGG - Chr5:34325257-34325276 MsG0580026298.01.T01:intron 25.0%
!! AATGCTTTATTCTCTTTCTA+TGG - Chr5:34323235-34323254 MsG0580026298.01.T01:intron 25.0%
!! ATACTTTTCTTCAACACTTT+TGG + Chr5:34326538-34326557 None:intergenic 25.0%
!! ATAGTCTAAAAACTGATTCA+TGG - Chr5:34322352-34322371 MsG0580026298.01.T01:intron 25.0%
!! CATTTCTGAAAAAAAATCCA+TGG - Chr5:34324561-34324580 MsG0580026298.01.T01:intron 25.0%
!! CTTTTTGTTCTATATGTTCT+AGG - Chr5:34325031-34325050 MsG0580026298.01.T01:intron 25.0%
!! GAAAATAATGGAACAATGAT+TGG - Chr5:34325703-34325722 MsG0580026298.01.T01:intron 25.0%
!! TAAGATAGTTTGAGTTAGTT+AGG - Chr5:34327176-34327195 MsG0580026298.01.T01:CDS 25.0%
!! TATAGAACAAAAAGAGCATA+TGG + Chr5:34325025-34325044 None:intergenic 25.0%
!! TCATGTGATTGAAATTTTAC+AGG - Chr5:34325438-34325457 MsG0580026298.01.T01:intron 25.0%
!! TCTTTTCACATATCAATCTT+GGG - Chr5:34322639-34322658 MsG0580026298.01.T01:CDS 25.0%
!! TTTGATACCATTGAGATTTT+AGG - Chr5:34322090-34322109 MsG0580026298.01.T01:intron 25.0%
!!! AACAATGATTGGTTTGTTTA+AGG - Chr5:34325714-34325733 MsG0580026298.01.T01:intron 25.0%
!!! AATTCTTGTTACTTTCTTTC+TGG - Chr5:34322009-34322028 MsG0580026298.01.T01:CDS 25.0%
!!! ATACTGATTTAAAATGAGAG+AGG + Chr5:34321986-34322005 None:intergenic 25.0%
!!! GAGATTTTAGGTTCAATTAA+TGG - Chr5:34322102-34322121 MsG0580026298.01.T01:intron 25.0%
!!! TGGATTTTTTTTCAGAAATG+AGG + Chr5:34324561-34324580 None:intergenic 25.0%
AAACCAATCATCATCATCAT+GGG - Chr5:34326764-34326783 MsG0580026298.01.T01:CDS 30.0%
AAACTTACACTGCAAATAAC+TGG + Chr5:34323306-34323325 None:intergenic 30.0%
AACTTAAAGAGGCTACTTAA+TGG + Chr5:34325341-34325360 None:intergenic 30.0%
AAGCGTTTGATAGATTTAAC+AGG + Chr5:34321871-34321890 None:intergenic 30.0%
AGAAGGGAAATATACTTGTT+AGG - Chr5:34322745-34322764 MsG0580026298.01.T01:intron 30.0%
AGACTATATATCTCCCAAAA+AGG + Chr5:34322339-34322358 None:intergenic 30.0%
AGTAGACTTATGTCATGAAT+AGG - Chr5:34323906-34323925 MsG0580026298.01.T01:intron 30.0%
AGTTTGCATATAAGCAACTT+CGG + Chr5:34323143-34323162 None:intergenic 30.0%
ATAGAGAAATGAATGTCATC+AGG + Chr5:34321835-34321854 None:intergenic 30.0%
ATATCAATCTTGGGTGAAAT+TGG - Chr5:34322648-34322667 MsG0580026298.01.T01:CDS 30.0%
ATATGAGATAGAGATAGCAT+AGG + Chr5:34327254-34327273 None:intergenic 30.0%
ATATTCCATATCTTCCAAGA+AGG + Chr5:34322550-34322569 None:intergenic 30.0%
CTTTCAATGGACATTCATAA+AGG + Chr5:34325663-34325682 None:intergenic 30.0%
GAATACAAACACTTCTTCTA+TGG - Chr5:34324453-34324472 MsG0580026298.01.T01:intron 30.0%
GACTATATATCTCCCAAAAA+GGG + Chr5:34322338-34322357 None:intergenic 30.0%
GGTAATTACTTCTGTTATCA+TGG - Chr5:34324012-34324031 MsG0580026298.01.T01:intron 30.0%
GTAAGAATGATGAGAAGATA+AGG + Chr5:34326903-34326922 None:intergenic 30.0%
GTCAGAATTTGAATAGATGA+TGG - Chr5:34325219-34325238 MsG0580026298.01.T01:intron 30.0%
GTCTATGAAACCACTATAAA+AGG + Chr5:34325844-34325863 None:intergenic 30.0%
GTCTGATATTACAACTGAAT+TGG - Chr5:34322233-34322252 MsG0580026298.01.T01:intron 30.0%
GTTTATTAAGGGTTTACCTT+GGG - Chr5:34325053-34325072 MsG0580026298.01.T01:intron 30.0%
TAACGATGAGAAGTTCAATA+TGG - Chr5:34322473-34322492 MsG0580026298.01.T01:CDS 30.0%
TAAGTGTTACAGACTATGAA+GGG + Chr5:34323532-34323551 None:intergenic 30.0%
TATTCCATATCTTCCAAGAA+GGG + Chr5:34322549-34322568 None:intergenic 30.0%
TCATCTATTCAAATTCTGAC+AGG + Chr5:34325219-34325238 None:intergenic 30.0%
TCCTTAAGAAGTAAGTACTT+TGG - Chr5:34323688-34323707 MsG0580026298.01.T01:intron 30.0%
TCTTCAAAAATCAGTTCCTT+TGG - Chr5:34326928-34326947 MsG0580026298.01.T01:CDS 30.0%
TGAAACCATTAAAACGTTTG+AGG + Chr5:34327497-34327516 None:intergenic 30.0%
TGAGAAGTTCAATATGGTTA+TGG - Chr5:34322479-34322498 MsG0580026298.01.T01:CDS 30.0%
TTACCAAATTGATCAGAAGT+AGG - Chr5:34324290-34324309 MsG0580026298.01.T01:intron 30.0%
TTATGGATCCTATCATAGTA+TGG - Chr5:34322721-34322740 MsG0580026298.01.T01:intron 30.0%
TTCTTCACTAAAACTTACAG+AGG + Chr5:34324436-34324455 None:intergenic 30.0%
! AAAGTACTTACTTCTTAAGG+AGG + Chr5:34323689-34323708 None:intergenic 30.0%
! AAAGTGTTAATTGCGATTTG+TGG + Chr5:34324112-34324131 None:intergenic 30.0%
! AAGAAAAGCAAACTTCCTTT+TGG - Chr5:34322864-34322883 MsG0580026298.01.T01:intron 30.0%
! AATGAAAGATGGTAATGAAG+AGG + Chr5:34326792-34326811 None:intergenic 30.0%
! ACCAAAGTACTTACTTCTTA+AGG + Chr5:34323692-34323711 None:intergenic 30.0%
! ATCTTAACTGCGTGATTTTA+AGG - Chr5:34324049-34324068 MsG0580026298.01.T01:intron 30.0%
! CACTATAAAAGGCATACTTA+AGG + Chr5:34325833-34325852 None:intergenic 30.0%
! CATTTTCAGCATATTTCTTC+TGG + Chr5:34327620-34327639 None:intergenic 30.0%
! CTTAAGTATGCCTTTTATAG+TGG - Chr5:34325831-34325850 MsG0580026298.01.T01:intron 30.0%
! GATATATCTGCGTGATTTTA+AGG - Chr5:34323878-34323897 MsG0580026298.01.T01:intron 30.0%
! GGAAGATATGGAATATTTTG+AGG - Chr5:34322554-34322573 MsG0580026298.01.T01:CDS 30.0%
! GTCTTTTCACATATCAATCT+TGG - Chr5:34322638-34322657 MsG0580026298.01.T01:CDS 30.0%
! TCCATTCTACTCTAAAAATG+TGG + Chr5:34323442-34323461 None:intergenic 30.0%
! TGAATTATTTGCTGATGTTG+TGG - Chr5:34324162-34324181 MsG0580026298.01.T01:intron 30.0%
! TTGGATTTCATTTTCTGTCA+AGG - Chr5:34325601-34325620 MsG0580026298.01.T01:intron 30.0%
!! CAAGCAGGAAAAGTATTTAT+TGG + Chr5:34325132-34325151 None:intergenic 30.0%
!! TGCATTCATTTTGTTGTGTA+AGG - Chr5:34325080-34325099 MsG0580026298.01.T01:intron 30.0%
!! TTGCTTTTATAGCCTTTATG+TGG - Chr5:34323048-34323067 MsG0580026298.01.T01:intron 30.0%
!!! CTTGTTTTGATTTAACTACC+GGG - Chr5:34322787-34322806 MsG0580026298.01.T01:intron 30.0%
!!! GCTTGTTTTGATTTAACTAC+CGG - Chr5:34322786-34322805 MsG0580026298.01.T01:intron 30.0%
!!! TCCACATTTTTAGAGTAGAA+TGG - Chr5:34323438-34323457 MsG0580026298.01.T01:intron 30.0%
AACTAGACTCATAAACCTTG+AGG + Chr5:34323083-34323102 None:intergenic 35.0%
AACTTCGGAAAGTTCAACTT+AGG + Chr5:34323128-34323147 None:intergenic 35.0%
AAGTTTCATAGCAAACAAGC+AGG + Chr5:34325147-34325166 None:intergenic 35.0%
AATAGGGATGTGTACTTGAA+TGG - Chr5:34322420-34322439 MsG0580026298.01.T01:intron 35.0%
AATGGCATTCTTTGTGTCAT+TGG - Chr5:34322120-34322139 MsG0580026298.01.T01:intron 35.0%
ACGAACATGTCCATGAAAAT+AGG + Chr5:34321934-34321953 None:intergenic 35.0%
ACTAAAACTTACAGAGGCAA+AGG + Chr5:34324430-34324449 None:intergenic 35.0%
ACTAGACTCATAAACCTTGA+GGG + Chr5:34323082-34323101 None:intergenic 35.0%
AGCCATTTGAACCATACAAA+TGG - Chr5:34323562-34323581 MsG0580026298.01.T01:intron 35.0%
AGGTGTATTCAAGTATACCA+TGG + Chr5:34324581-34324600 None:intergenic 35.0%
ATAGGGATGTGTACTTGAAT+GGG - Chr5:34322421-34322440 MsG0580026298.01.T01:intron 35.0%
ATATCTTCCAAGAAGGGTAA+AGG + Chr5:34322543-34322562 None:intergenic 35.0%
ATCTCAATGGTATCAAACTC+TGG + Chr5:34322087-34322106 None:intergenic 35.0%
CAAACCAATCATCATCATCA+TGG - Chr5:34326763-34326782 MsG0580026298.01.T01:CDS 35.0%
CAAGTGCTTATTGTGATTTG+CGG + Chr5:34323941-34323960 None:intergenic 35.0%
CAGTACTATACTACTGAATC+CGG - Chr5:34322164-34322183 MsG0580026298.01.T01:intron 35.0%
CCTATCATAGTATGGAAGAA+GGG - Chr5:34322729-34322748 MsG0580026298.01.T01:intron 35.0%
CTGCATTAAAGCATGGTAAA+AGG + Chr5:34326999-34327018 None:intergenic 35.0%
CTGTTCTCATTCTGTTATCA+TGG - Chr5:34324194-34324213 MsG0580026298.01.T01:intron 35.0%
CTTCTATTGCAATTCTTCTC+TGG - Chr5:34326954-34326973 MsG0580026298.01.T01:CDS 35.0%
CTTTCTATGGCATATTGTTC+TGG - Chr5:34323248-34323267 MsG0580026298.01.T01:intron 35.0%
GAAGTTGCTTATATGCAAAC+TGG - Chr5:34323142-34323161 MsG0580026298.01.T01:intron 35.0%
GAGGAGGTTAGTAATAGTAA+TGG - Chr5:34321793-34321812 MsG0580026298.01.T01:CDS 35.0%
GAGTTGCGTATGGAAAATAA+TGG - Chr5:34325691-34325710 MsG0580026298.01.T01:intron 35.0%
GGATCCATAATACAAGACAA+AGG + Chr5:34322711-34322730 None:intergenic 35.0%
GGTTTATTAAGGGTTTACCT+TGG - Chr5:34325052-34325071 MsG0580026298.01.T01:intron 35.0%
GTAAGTGTTACAGACTATGA+AGG + Chr5:34323533-34323552 None:intergenic 35.0%
GTCACTCCAAATATCGAATT+TGG - Chr5:34324645-34324664 MsG0580026298.01.T01:intron 35.0%
GTGGAAATCTGAATGAAAGA+TGG + Chr5:34326803-34326822 None:intergenic 35.0%
TAAAGAGGCTACTTAATGGA+TGG + Chr5:34325337-34325356 None:intergenic 35.0%
TAGTACCTATGTCCAATCAA+TGG + Chr5:34323350-34323369 None:intergenic 35.0%
TATTTGCATACACTCCACAA+CGG + Chr5:34322404-34322423 None:intergenic 35.0%
TCCTATCATAGTATGGAAGA+AGG - Chr5:34322728-34322747 MsG0580026298.01.T01:intron 35.0%
TGACGATTATGATTGATCGA+CGG - Chr5:34327340-34327359 MsG0580026298.01.T01:CDS 35.0%
TGGACCTTTGTCTTGTATTA+TGG - Chr5:34322704-34322723 MsG0580026298.01.T01:intron 35.0%
TTCAAGCAGTTTCTTCACAA+GGG + Chr5:34327664-34327683 None:intergenic 35.0%
TTCATTAGAGACACATGCTA+AGG - Chr5:34327041-34327060 MsG0580026298.01.T01:CDS 35.0%
TTGCTACAAAACATGCACTT+CGG + Chr5:34324335-34324354 None:intergenic 35.0%
TTGTACATGCTTGCTTTCAT+AGG - Chr5:34325489-34325508 MsG0580026298.01.T01:intron 35.0%
TTGTGGAGTGTATGCAAATA+GGG - Chr5:34322404-34322423 MsG0580026298.01.T01:intron 35.0%
TTTACCCTTCTTGGAAGATA+TGG - Chr5:34322542-34322561 MsG0580026298.01.T01:CDS 35.0%
! AGATGAAATTGAGTTGCGTA+TGG - Chr5:34325681-34325700 MsG0580026298.01.T01:intron 35.0%
! AGCAGAACAATTTTGTCAAG+TGG - Chr5:34322833-34322852 MsG0580026298.01.T01:intron 35.0%
! ATAGGTGTAGATGCATGTTT+TGG - Chr5:34324261-34324280 MsG0580026298.01.T01:intron 35.0%
! ATCTACCATTGATTGGACAT+AGG - Chr5:34323342-34323361 MsG0580026298.01.T01:intron 35.0%
! ATTGCTCAGTTTTTCACAGA+AGG + Chr5:34326825-34326844 None:intergenic 35.0%
! ATTGGTGACATTATACACGT+TGG - Chr5:34322138-34322157 MsG0580026298.01.T01:intron 35.0%
! CATGATGATGATGATTGGTT+TGG + Chr5:34326765-34326784 None:intergenic 35.0%
! GACTTCCTCAAACGTTTTAA+TGG - Chr5:34327489-34327508 MsG0580026298.01.T01:CDS 35.0%
! TATTGTGATTTGCGGTGTAA+TGG + Chr5:34323933-34323952 None:intergenic 35.0%
! TCTACTCTAAAAATGTGGAC+TGG + Chr5:34323437-34323456 None:intergenic 35.0%
! TGAATTATTTGCTGATGCTG+TGG - Chr5:34323991-34324010 MsG0580026298.01.T01:intron 35.0%
! TGCCATTTGTATGGTTCAAA+TGG + Chr5:34323567-34323586 None:intergenic 35.0%
! TGGTAAAAGGTTACTTTACC+TGG + Chr5:34326986-34327005 None:intergenic 35.0%
! TTAATGCAAACATTGGTTGC+AGG + Chr5:34324601-34324620 None:intergenic 35.0%
!! AAATTGGTGTCAAGGAATCA+TGG - Chr5:34322664-34322683 MsG0580026298.01.T01:CDS 35.0%
!! AACTGCGTGATTTTAAGGAT+AGG - Chr5:34324054-34324073 MsG0580026298.01.T01:intron 35.0%
!! AATTGGTGTCAAGGAATCAT+GGG - Chr5:34322665-34322684 MsG0580026298.01.T01:CDS 35.0%
!! ATCTGCGTGATTTTAAGGAT+AGG - Chr5:34323883-34323902 MsG0580026298.01.T01:intron 35.0%
!! GCTTGTTATCTACCATTGAT+TGG - Chr5:34323335-34323354 MsG0580026298.01.T01:intron 35.0%
!! GGTTTATGAGTCTAGTTCTT+AGG - Chr5:34323086-34323105 MsG0580026298.01.T01:intron 35.0%
!! GTTATGGTGTCATTTCACTT+GGG - Chr5:34322495-34322514 MsG0580026298.01.T01:CDS 35.0%
!! TCAAACTCTGGAGTATGAAA+TGG + Chr5:34322075-34322094 None:intergenic 35.0%
!!! ACAACTGAATTGGTTTTCCA+TGG - Chr5:34322243-34322262 MsG0580026298.01.T01:intron 35.0%
!!! GAATTGGTTTTCCATGGATT+TGG - Chr5:34322249-34322268 MsG0580026298.01.T01:intron 35.0%
AAAATGAATGCAACCACCCA+AGG + Chr5:34325072-34325091 None:intergenic 40.0%
ACTGAGCAATCCTCAAAAGA+AGG - Chr5:34326835-34326854 MsG0580026298.01.T01:CDS 40.0%
AGATATTCGTCCACAACTTG+AGG - Chr5:34324375-34324394 MsG0580026298.01.T01:intron 40.0%
AGGGTGAAAACTCCACATAA+AGG + Chr5:34323063-34323082 None:intergenic 40.0%
ATTGCAATAGAAGCAGCCAA+AGG + Chr5:34326947-34326966 None:intergenic 40.0%
CAATATGTGGATGTTGTGGA+GGG - Chr5:34322306-34322325 MsG0580026298.01.T01:CDS 40.0%
CAGAGGTCTATAACTCCAAA+AGG + Chr5:34322882-34322901 None:intergenic 40.0%
CATCCAATATGTGGATGTTG+TGG - Chr5:34322302-34322321 MsG0580026298.01.T01:CDS 40.0%
CATTGTCATAGCCAAATCCA+TGG + Chr5:34322263-34322282 None:intergenic 40.0%
CCCTTCTTCCATACTATGAT+AGG + Chr5:34322732-34322751 None:intergenic 40.0%
CCTCAAAAGAAGGTTCAGTT+TGG - Chr5:34326845-34326864 MsG0580026298.01.T01:CDS 40.0%
CGGATTCAGTAGTATAGTAC+TGG + Chr5:34322166-34322185 None:intergenic 40.0%
GAGGCAAAGGCAACAAAAAT+AGG + Chr5:34324417-34324436 None:intergenic 40.0%
GCACCTACTTCTGATCAATT+TGG + Chr5:34324296-34324315 None:intergenic 40.0%
GTTCAAGCAGTTTCTTCACA+AGG + Chr5:34327665-34327684 None:intergenic 40.0%
GTTGTGGAGTGTATGCAAAT+AGG - Chr5:34322403-34322422 MsG0580026298.01.T01:intron 40.0%
TAACTGGCATACGGAACTAA+TGG + Chr5:34326125-34326144 None:intergenic 40.0%
TAAGAAGAAAAAGAAGGGGG+AGG - Chr5:34321774-34321793 MsG0580026298.01.T01:CDS 40.0%
TAGGGATGTGTACTTGAATG+GGG - Chr5:34322422-34322441 MsG0580026298.01.T01:intron 40.0%
TATTAAGGGTTTACCTTGGG+TGG - Chr5:34325056-34325075 MsG0580026298.01.T01:intron 40.0%
TCAAGCAGTTTCTTCACAAG+GGG + Chr5:34327663-34327682 None:intergenic 40.0%
TCAATACTTCTCGTAGCTAG+TGG + Chr5:34326148-34326167 None:intergenic 40.0%
TCTCTTGTGTTCGTAGATCA+TGG - Chr5:34321890-34321909 MsG0580026298.01.T01:intron 40.0%
TCTTAGTTGTGCATTTGTCC+TGG - Chr5:34324947-34324966 MsG0580026298.01.T01:intron 40.0%
TGCTACAAAACATGCACTTC+GGG + Chr5:34324334-34324353 None:intergenic 40.0%
TGTTACACCTTTACCCTTCT+TGG - Chr5:34322533-34322552 MsG0580026298.01.T01:CDS 40.0%
TTAAGCTGCAGGTGTTCAAT+GGG - Chr5:34322580-34322599 MsG0580026298.01.T01:CDS 40.0%
TTGCATGCTGCATTAAAGCA+TGG + Chr5:34327006-34327025 None:intergenic 40.0%
TTTAACTACCGGGATGATTG+AGG - Chr5:34322797-34322816 MsG0580026298.01.T01:intron 40.0%
! ACTTCAGCTTGTTTGAGCTT+TGG - Chr5:34325184-34325203 MsG0580026298.01.T01:intron 40.0%
! AGCATGACTTGCCATTTGTA+TGG + Chr5:34323576-34323595 None:intergenic 40.0%
! CCAAACTGAACCTTCTTTTG+AGG + Chr5:34326848-34326867 None:intergenic 40.0%
! GAACCCATGATGATGATGAT+TGG + Chr5:34326770-34326789 None:intergenic 40.0%
! TGGGTTAGGCTATTTGACAT+TGG - Chr5:34322684-34322703 MsG0580026298.01.T01:CDS 40.0%
!! AACTCTGGAGTATGAAATGG+AGG + Chr5:34322072-34322091 None:intergenic 40.0%
!! GAGAGCACTTGACATATTGA+AGG + Chr5:34326004-34326023 None:intergenic 40.0%
!! GGTTATGGTGTCATTTCACT+TGG - Chr5:34322494-34322513 MsG0580026298.01.T01:CDS 40.0%
!! TTTTGAGGATGTTAAGCTGC+AGG - Chr5:34322569-34322588 MsG0580026298.01.T01:CDS 40.0%
!!! TCTTATTTTGCAGCACATGC+TGG - Chr5:34327408-34327427 MsG0580026298.01.T01:CDS 40.0%
AAATGCATAGCCGCCTCATT+GGG - Chr5:34323501-34323520 MsG0580026298.01.T01:intron 45.0%
AAGGAAAGGGCAGTGAGATA+AGG + Chr5:34326694-34326713 None:intergenic 45.0%
ACCAATCTCCTCAATCATCC+CGG + Chr5:34322808-34322827 None:intergenic 45.0%
ACCTTAACTTCCTCAGTAGC+CGG + Chr5:34322186-34322205 None:intergenic 45.0%
ACTTGAATGGGGTCTGTCAT+TGG - Chr5:34322433-34322452 MsG0580026298.01.T01:CDS 45.0%
ACTTGGGAGTTGGAAGGAAA+GGG + Chr5:34326707-34326726 None:intergenic 45.0%
AGCTAGTGGTAACTGGCATA+CGG + Chr5:34326134-34326153 None:intergenic 45.0%
AGGAAAGGGCAGTGAGATAA+GGG + Chr5:34326693-34326712 None:intergenic 45.0%
ATTCTTCTCTGGTCAACTCC+AGG - Chr5:34326965-34326984 MsG0580026298.01.T01:CDS 45.0%
ATTGATATGCCAGTCCGTTG+TGG - Chr5:34322387-34322406 MsG0580026298.01.T01:intron 45.0%
CAATACTGTCATCAACGTGC+TGG + Chr5:34325584-34325603 None:intergenic 45.0%
CATTTCTGCATGGACAACAG+AGG + Chr5:34322899-34322918 None:intergenic 45.0%
CCAATATGTGGATGTTGTGG+AGG - Chr5:34322305-34322324 MsG0580026298.01.T01:CDS 45.0%
CCTCCACAACATCCACATAT+TGG + Chr5:34322308-34322327 None:intergenic 45.0%
CGTTTGAGGAAGTCAATCTG+AGG + Chr5:34327483-34327502 None:intergenic 45.0%
CTGTTGTCCATGCAGAAATG+CGG - Chr5:34322899-34322918 MsG0580026298.01.T01:intron 45.0%
GGAAATGCACAACGCACTTT+CGG - Chr5:34326479-34326498 MsG0580026298.01.T01:intron 45.0%
GGATTCATGTCAGGAATCAC+AGG - Chr5:34327429-34327448 MsG0580026298.01.T01:CDS 45.0%
GGTTCAAAGCATGTAAGCCA+AGG - Chr5:34323617-34323636 MsG0580026298.01.T01:intron 45.0%
GGTTCAAATGGCTCATGTGA+GGG + Chr5:34323555-34323574 None:intergenic 45.0%
GTCATTTCACTTGGGCAATG+AGG - Chr5:34322503-34322522 MsG0580026298.01.T01:CDS 45.0%
GTGTCAAGGAATCATGGGTT+AGG - Chr5:34322670-34322689 MsG0580026298.01.T01:CDS 45.0%
GTTAAGCTGCAGGTGTTCAA+TGG - Chr5:34322579-34322598 MsG0580026298.01.T01:CDS 45.0%
TAAGGGGCAGCAGATATACA+AGG + Chr5:34326676-34326695 None:intergenic 45.0%
TGCCTATCAGCTGAACACTT+GGG + Chr5:34326723-34326742 None:intergenic 45.0%
TGGTTCAAATGGCTCATGTG+AGG + Chr5:34323556-34323575 None:intergenic 45.0%
TTCTCGTAGCTAGTGGTAAC+TGG + Chr5:34326141-34326160 None:intergenic 45.0%
! AATGGGGTCTGTCATTGGTT+AGG - Chr5:34322438-34322457 MsG0580026298.01.T01:CDS 45.0%
! ATGGGGTCTGTCATTGGTTA+GGG - Chr5:34322439-34322458 MsG0580026298.01.T01:CDS 45.0%
! ATGTGGAGTTTTCACCCTCA+AGG - Chr5:34323065-34323084 MsG0580026298.01.T01:intron 45.0%
! GCTCAGTTTTTCACAGAAGG+TGG + Chr5:34326822-34326841 None:intergenic 45.0%
! TCTGGAGTATGAAATGGAGG+TGG + Chr5:34322069-34322088 None:intergenic 45.0%
!! CAGCACGTTGATGACAGTAT+TGG - Chr5:34325582-34325601 MsG0580026298.01.T01:intron 45.0%
!! CTTGGGTGAAATTGGTGTCA+AGG - Chr5:34322656-34322675 MsG0580026298.01.T01:CDS 45.0%
!!! AAAAGTATTTTAAATATTAA+AGG - Chr5:34326550-34326569 MsG0580026298.01.T01:CDS 5.0%
!!! TTTTTAAATATATATATACA+TGG - Chr5:34324672-34324691 MsG0580026298.01.T01:intron 5.0%
ACAGGACTAGAGTCTGTTCC+TGG - Chr5:34327447-34327466 MsG0580026298.01.T01:CDS 50.0%
ACCGGGATGATTGAGGAGAT+TGG - Chr5:34322804-34322823 MsG0580026298.01.T01:intron 50.0%
ACTACTGAATCCGGCTACTG+AGG - Chr5:34322173-34322192 MsG0580026298.01.T01:intron 50.0%
AGAAGCTCACCACGACTAAC+AGG + Chr5:34322213-34322232 None:intergenic 50.0%
AGGCGGCTATGCATTTCTCT+TGG + Chr5:34323497-34323516 None:intergenic 50.0%
ATAGGCAGCAGTGTAGAGAG+TGG - Chr5:34326736-34326755 MsG0580026298.01.T01:CDS 50.0%
ATGAAGGGAACGACCCAATG+AGG + Chr5:34323517-34323536 None:intergenic 50.0%
CAAACCTTGACAGCTGAACC+AGG + Chr5:34324968-34324987 None:intergenic 50.0%
CACTTGGGAGTTGGAAGGAA+AGG + Chr5:34326708-34326727 None:intergenic 50.0%
CCACAACTTGAGGAGAATGG+AGG - Chr5:34324385-34324404 MsG0580026298.01.T01:intron 50.0%
CGTCCACAACTTGAGGAGAA+TGG - Chr5:34324382-34324401 MsG0580026298.01.T01:intron 50.0%
CTCCCAAGTGTTCAGCTGAT+AGG - Chr5:34326718-34326737 MsG0580026298.01.T01:CDS 50.0%
CTGAACACTTGGGAGTTGGA+AGG + Chr5:34326713-34326732 None:intergenic 50.0%
CTGCCTATCAGCTGAACACT+TGG + Chr5:34326724-34326743 None:intergenic 50.0%
CTGGTTCAGCTGTCAAGGTT+TGG - Chr5:34324966-34324985 MsG0580026298.01.T01:intron 50.0%
GAAATGCATAGCCGCCTCAT+TGG - Chr5:34323500-34323519 MsG0580026298.01.T01:intron 50.0%
GAAGAAAAAGAAGGGGGAGG+AGG - Chr5:34321777-34321796 MsG0580026298.01.T01:CDS 50.0%
GCACATGCTGGATTCATGTC+AGG - Chr5:34327420-34327439 MsG0580026298.01.T01:CDS 50.0%
GGAAAGGGCAGTGAGATAAG+GGG + Chr5:34326692-34326711 None:intergenic 50.0%
GGCGGCTATGCATTTCTCTT+GGG + Chr5:34323496-34323515 None:intergenic 50.0%
TCAGCTGAACACTTGGGAGT+TGG + Chr5:34326717-34326736 None:intergenic 50.0%
TCCGGCTACTGAGGAAGTTA+AGG - Chr5:34322182-34322201 MsG0580026298.01.T01:intron 50.0%
TGTGGATGTTGTGGAGGGTA+AGG - Chr5:34322311-34322330 MsG0580026298.01.T01:CDS 50.0%
TTGTCCTGGTTCAGCTGTCA+AGG - Chr5:34324961-34324980 MsG0580026298.01.T01:intron 50.0%
! AAGGTGCTTCCTGTTAGTCG+TGG - Chr5:34322201-34322220 MsG0580026298.01.T01:intron 50.0%
! AAGTCAATCTGAGGCAGCTC+AGG + Chr5:34327474-34327493 None:intergenic 50.0%
! CATTGGTTAGGGCAAGCAGA+AGG - Chr5:34322450-34322469 MsG0580026298.01.T01:CDS 50.0%
! CCTCCATTCTCCTCAAGTTG+TGG + Chr5:34324388-34324407 None:intergenic 50.0%
! GGAGGGTAAGGACCCTTTTT+GGG - Chr5:34322323-34322342 MsG0580026298.01.T01:intron 50.0%
! TGGAGGGTAAGGACCCTTTT+TGG - Chr5:34322322-34322341 MsG0580026298.01.T01:intron 50.0%
AAGGGAACGACCCAATGAGG+CGG + Chr5:34323514-34323533 None:intergenic 55.0%
CGCCAACCCAATAATTGGCG+CGG - Chr5:34322930-34322949 MsG0580026298.01.T01:intron 55.0%
GCACTTTCGGTTAGCGCCAT+AGG - Chr5:34326492-34326511 MsG0580026298.01.T01:intron 55.0%
GCATACACTCCACAACGGAC+TGG + Chr5:34322399-34322418 None:intergenic 55.0%
GGCACCGCCAACCCAATAAT+TGG - Chr5:34322925-34322944 MsG0580026298.01.T01:intron 55.0%
!! CGCGCCAATTATTGGGTTGG+CGG + Chr5:34322932-34322951 None:intergenic 55.0%
ACCCAATAATTGGCGCGGCG+CGG - Chr5:34322935-34322954 MsG0580026298.01.T01:intron 60.0%
ACCGCGCCGCGCCAATTATT+GGG + Chr5:34322939-34322958 None:intergenic 60.0%
CGCCGCGCCAATTATTGGGT+TGG + Chr5:34322935-34322954 None:intergenic 60.0%
GTCCATGCAGAAATGCGGCG+CGG - Chr5:34322904-34322923 MsG0580026298.01.T01:intron 60.0%
! ATCTGAGGCAGCTCAGGACC+AGG + Chr5:34327468-34327487 None:intergenic 60.0%
ATAATTGGCGCGGCGCGGTG+CGG - Chr5:34322940-34322959 MsG0580026298.01.T01:intron 65.0%
CACCGCGCCGCGCCAATTAT+TGG + Chr5:34322940-34322959 None:intergenic 65.0%
TGCCGCGCCGCATTTCTGCA+TGG + Chr5:34322909-34322928 None:intergenic 65.0%
TAATTGGCGCGGCGCGGTGC+GGG - Chr5:34322941-34322960 MsG0580026298.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 34321745 34327710 34321745 ID=MsG0580026298.01;Name=MsG0580026298.01
Chr5 mRNA 34321745 34327710 34321745 ID=MsG0580026298.01.T01;Parent=MsG0580026298.01;Name=MsG0580026298.01.T01;_AED=0.47;_eAED=0.50;_QI=0|0.25|0.2|1|0.25|0.4|5|0|573
Chr5 exon 34326499 34327710 34326499 ID=MsG0580026298.01.T01:exon:25450;Parent=MsG0580026298.01.T01
Chr5 exon 34322425 34322703 34322425 ID=MsG0580026298.01.T01:exon:25449;Parent=MsG0580026298.01.T01
Chr5 exon 34322297 34322336 34322297 ID=MsG0580026298.01.T01:exon:25448;Parent=MsG0580026298.01.T01
Chr5 exon 34321945 34322034 34321945 ID=MsG0580026298.01.T01:exon:25447;Parent=MsG0580026298.01.T01
Chr5 exon 34321745 34321845 34321745 ID=MsG0580026298.01.T01:exon:25446;Parent=MsG0580026298.01.T01
Chr5 CDS 34326499 34327710 34326499 ID=MsG0580026298.01.T01:cds;Parent=MsG0580026298.01.T01
Chr5 CDS 34322425 34322703 34322425 ID=MsG0580026298.01.T01:cds;Parent=MsG0580026298.01.T01
Chr5 CDS 34322297 34322336 34322297 ID=MsG0580026298.01.T01:cds;Parent=MsG0580026298.01.T01
Chr5 CDS 34321945 34322034 34321945 ID=MsG0580026298.01.T01:cds;Parent=MsG0580026298.01.T01
Chr5 CDS 34321745 34321845 34321745 ID=MsG0580026298.01.T01:cds;Parent=MsG0580026298.01.T01
Gene Sequence

>MsG0580026298.01.T01

ATGTTCGACAAAATGACTCAAACAACAAATAAGAAGAAAAAGAAGGGGGAGGAGGTTAGTAATAGTAATGGTAATGGTAGCTATATTCCTGATGACATTCATTTCTCTATTCTCTCTAAGCTTCCTGTTAAATCTATCAAACGCTTCTCTTGTGTTCGTAGATCATGGTCACTTTTATTTGAAAATCCTATTTTCATGGACATGTTCGTTTCGAATTCTGATTCACTCTATCATGATGCCTCTCTCATTTTAAATCAGTATCAGAATTCTTGTTACTTTCTTTCTGGTCACAAGTTTCAGAATAAAATCAAATTGAATTTTCCACCTCCATTTCATACTCCAGAGTTTGATACCATTGAGATTTTAGGTTCAATTAATGGCATTCTTTGTGTCATTGGTGACATTATACACGTTGGTACCAGTACTATACTACTGAATCCGGCTACTGAGGAAGTTAAGGTGCTTCCTGTTAGTCGTGGTGAGCTTCTGTCTGATATTACAACTGAATTGGTTTTCCATGGATTTGGCTATGACAATGTTAGAGATGATTATAAAGTCATCCAATATGTGGATGTTGTGGAGGGTAAGGACCCTTTTTGGGAGATATATAGTCTAAAAACTGATTCATGGAGAAAAATTTGTATTGATATGCCAGTCCGTTGTGGAGTGTATGCAAATAGGGATGTGTACTTGAATGGGGTCTGTCATTGGTTAGGGCAAGCAGAAGGTAACGATGAGAAGTTCAATATGGTTATGGTGTCATTTCACTTGGGCAATGAGGTGTGCTTTGTTACACCTTTACCCTTCTTGGAAGATATGGAATATTTTGAGGATGTTAAGCTGCAGGTGTTCAATGGGTCAGTTGCTGTGATATTTAATCATATAGAGACAAAGTCTTTTCACATATCAATCTTGGGTGAAATTGGTGTCAAGGAATCATGGGTTAGGCTATTTGACATTGGACCTTTGTCTTGTATTATGGATCCTATCATAGTATGGAAGAAGGGAAATATACTTGTTAGGAAAGAAGATGATCAACTAGCTTGTTTTGATTTAACTACCGGGATGATTGAGGAGATTGGTGCTAAAGCAGAACAATTTTGTCAAGTGGTAGTTTACAAGAAAAGCAAACTTCCTTTTGGAGTTATAGACCTCTGTTGTCCATGCAGAAATGCGGCGCGGCACCGCCAACCCAATAATTGGCGCGGCGCGAGAGTGGAAGCCAAACCAATCATCATCATCATGGGTTCCTCTTCATTACCATCTTTCATTCAGATTTCCACCTTCTGTGAAAAACTGAGCAATCCTCAAAAGAAGGTTCAGTTTGGAATAACAAAAAATGACACAAAGTTTTCTTGCTCCTTATCTTCTCATCATTCTTACAATATTCTTCAAAAATCAGTTCCTTTGGCTGCTTCTATTGCAATTCTTCTCTGGTCAACTCCAGGTAAAGTAACCTTTTACCATGCTTTAATGCAGCATGCAATTCAATGTCATCAAATCATAATCAATCATATATATGATTTTACAACACATGCTGGATTCATGTCAGGAATCACAGGACTAGAGTCTGTTCCTGGTCCTGAGCTGCCTCAGATTGACTTCCTCAAACGTTTTAATGAGGAAAACCAGAAGAAATATGCTGAAAATGATGCAAGATTTAAAGAGACACCCCTTGTGAAGAAACTGCTTGAACAATCTAAGTTGAACAAAGAGAAGTAA

Protein sequence

>MsG0580026298.01.T01

MFDKMTQTTNKKKKKGEEVSNSNGNGSYIPDDIHFSILSKLPVKSIKRFSCVRRSWSLLFENPIFMDMFVSNSDSLYHDASLILNQYQNSCYFLSGHKFQNKIKLNFPPPFHTPEFDTIEILGSINGILCVIGDIIHVGTSTILLNPATEEVKVLPVSRGELLSDITTELVFHGFGYDNVRDDYKVIQYVDVVEGKDPFWEIYSLKTDSWRKICIDMPVRCGVYANRDVYLNGVCHWLGQAEGNDEKFNMVMVSFHLGNEVCFVTPLPFLEDMEYFEDVKLQVFNGSVAVIFNHIETKSFHISILGEIGVKESWVRLFDIGPLSCIMDPIIVWKKGNILVRKEDDQLACFDLTTGMIEEIGAKAEQFCQVVVYKKSKLPFGVIDLCCPCRNAARHRQPNNWRGARVEAKPIIIIMGSSSLPSFIQISTFCEKLSNPQKKVQFGITKNDTKFSCSLSSHHSYNILQKSVPLAASIAILLWSTPGKVTFYHALMQHAIQCHQIIINHIYDFTTHAGFMSGITGLESVPGPELPQIDFLKRFNEENQKKYAENDARFKETPLVKKLLEQSKLNKEK*