AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044040.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044040.01.T01 MTR_8g046310 80.155 388 65 6 1 386 1 378 0.0 618
MsG0880044040.01.T01 MTR_8g046220 66.981 424 81 6 3 386 2 406 0.0 541
MsG0880044040.01.T01 MTR_8g046200 66.432 426 93 8 5 386 3 422 0.0 530
MsG0880044040.01.T01 MTR_1g053510 47.653 426 163 12 1 386 1 406 3.32e-117 347
MsG0880044040.01.T01 MTR_8g033140 46.028 428 160 13 5 382 8 414 5.83e-102 308
MsG0880044040.01.T01 MTR_8g032980 45.330 439 161 16 1 382 1 417 1.54e-96 294
MsG0880044040.01.T01 MTR_8g033110 43.198 419 171 13 14 382 10 411 2.46e-96 293
MsG0880044040.01.T01 MTR_8g033090 43.230 421 165 13 14 382 10 408 1.06e-95 292
MsG0880044040.01.T01 MTR_0129s0070 43.171 410 178 14 5 381 4 391 1.30e-93 286
MsG0880044040.01.T01 MTR_8g018110 44.254 409 163 12 14 382 10 393 2.00e-93 286
MsG0880044040.01.T01 MTR_0129s0120 41.463 410 185 14 5 381 4 391 3.48e-87 270
MsG0880044040.01.T01 MTR_8g063440 42.750 400 188 15 5 384 3 381 9.60e-84 260
MsG0880044040.01.T01 MTR_0129s0050 40.802 424 176 16 8 380 3 402 6.96e-83 259
MsG0880044040.01.T01 MTR_4g117550 41.687 403 169 16 3 380 6 367 3.26e-81 253
MsG0880044040.01.T01 MTR_8g464770 40.722 388 190 15 16 383 10 377 1.86e-79 249
MsG0880044040.01.T01 MTR_8g035690 51.894 264 82 7 160 382 40 299 3.94e-79 246
MsG0880044040.01.T01 MTR_4g028510 41.766 419 175 20 5 381 6 397 1.04e-77 247
MsG0880044040.01.T01 MTR_5g097330 40.000 395 202 12 17 384 15 401 1.08e-77 245
MsG0880044040.01.T01 MTR_6g086825 40.095 419 191 13 5 382 57 456 2.90e-77 246
MsG0880044040.01.T01 MTR_2g066170 41.013 395 195 13 7 381 5 381 7.22e-77 243
MsG0880044040.01.T01 MTR_5g097350 42.105 380 179 14 27 384 25 385 7.88e-76 240
MsG0880044040.01.T01 MTR_3g011120 41.775 383 184 14 4 370 3 362 1.14e-75 239
MsG0880044040.01.T01 MTR_7g017040 40.732 410 189 15 4 381 6 393 1.75e-75 239
MsG0880044040.01.T01 MTR_1g007450 38.776 392 188 13 7 367 5 375 1.99e-75 240
MsG0880044040.01.T01 MTR_4g028660 40.777 412 182 19 4 378 5 391 2.54e-75 239
MsG0880044040.01.T01 MTR_4g027450 40.777 412 182 19 4 378 5 391 2.54e-75 239
MsG0880044040.01.T01 MTR_2g104280 40.299 402 189 13 16 380 12 399 3.45e-75 239
MsG0880044040.01.T01 MTR_5g097220 37.850 428 191 15 8 384 3 406 1.03e-74 238
MsG0880044040.01.T01 MTR_0054s0090 37.678 422 194 15 8 382 3 402 9.86e-74 235
MsG0880044040.01.T01 MTR_8g039500 43.443 366 168 13 7 357 5 346 9.90e-74 233
MsG0880044040.01.T01 MTR_2g066200 39.196 398 204 15 5 381 3 383 2.14e-73 234
MsG0880044040.01.T01 MTR_6g079770 40.000 420 176 17 16 381 15 412 2.45e-73 234
MsG0880044040.01.T01 MTR_8g064890 40.452 398 194 15 6 381 7 383 3.02e-73 233
MsG0880044040.01.T01 MTR_2g021800 38.517 418 179 15 16 378 14 408 7.67e-73 233
MsG0880044040.01.T01 MTR_2g034700 42.782 381 182 16 14 379 10 369 9.38e-73 231
MsG0880044040.01.T01 MTR_6g080680 38.929 411 185 15 5 380 10 389 1.12e-72 232
MsG0880044040.01.T01 MTR_8g012090 41.026 351 168 7 16 357 14 334 1.12e-72 230
MsG0880044040.01.T01 MTR_5g096630 38.293 410 186 17 19 381 20 409 1.97e-72 232
MsG0880044040.01.T01 MTR_4g028680 39.372 414 192 15 4 381 5 395 3.41e-72 231
MsG0880044040.01.T01 MTR_2g065860 37.028 397 214 11 5 381 3 383 1.32e-71 229
MsG0880044040.01.T01 MTR_4g055820 40.526 380 167 12 1 343 1 358 2.03e-71 228
MsG0880044040.01.T01 MTR_2g065840 37.337 383 205 11 22 382 16 385 2.06e-71 229
MsG0880044040.01.T01 MTR_5g037680 40.051 392 195 15 14 380 4 380 2.41e-71 230
MsG0880044040.01.T01 MTR_0054s0100 37.713 411 187 15 16 380 15 402 7.64e-71 228
MsG0880044040.01.T01 MTR_5g097680 36.580 421 199 14 16 381 15 422 1.92e-70 227
MsG0880044040.01.T01 MTR_2g021950 38.168 393 202 15 16 381 14 392 6.53e-70 225
MsG0880044040.01.T01 MTR_2g022000 40.000 415 174 18 16 377 14 406 7.76e-70 226
MsG0880044040.01.T01 MTR_5g069390 38.575 407 212 14 6 382 15 413 8.05e-70 228
MsG0880044040.01.T01 MTR_2g038680 38.534 423 191 15 5 381 7 406 1.20e-69 225
MsG0880044040.01.T01 MTR_7g017130 37.990 408 200 16 5 382 9 393 2.07e-69 224
MsG0880044040.01.T01 MTR_8g467670 36.410 390 216 11 3 379 2 372 2.12e-69 224
MsG0880044040.01.T01 MTR_6g079810 37.825 423 198 14 6 382 56 459 3.59e-69 225
MsG0880044040.01.T01 MTR_4g102410 39.454 403 191 17 16 381 59 445 8.01e-69 224
MsG0880044040.01.T01 MTR_5g096910 38.974 390 202 13 14 381 13 388 1.14e-68 222
MsG0880044040.01.T01 MTR_6g090180 37.589 423 204 16 6 386 32 436 3.77e-68 221
MsG0880044040.01.T01 MTR_5g059430 38.072 415 212 16 6 382 15 422 6.11e-68 221
MsG0880044040.01.T01 MTR_0134s0060 37.647 425 195 14 5 380 3 406 6.86e-68 220
MsG0880044040.01.T01 MTR_8g041270 38.425 419 200 15 1 380 1 400 8.50e-68 220
MsG0880044040.01.T01 MTR_7g017170 38.205 390 190 15 5 366 9 375 8.63e-68 220
MsG0880044040.01.T01 MTR_4g028750 40.506 395 179 15 6 366 7 379 9.12e-68 219
MsG0880044040.01.T01 MTR_2g104340 38.795 415 194 14 1 380 1 390 9.99e-68 219
MsG0880044040.01.T01 MTR_6g461660 37.745 408 203 17 7 384 12 398 1.72e-67 219
MsG0880044040.01.T01 MTR_0831s0010 39.312 407 188 17 5 381 39 416 1.68e-66 217
MsG0880044040.01.T01 MTR_7g069550 35.577 416 205 15 1 378 1 391 2.48e-66 216
MsG0880044040.01.T01 MTR_7g079640 38.360 378 186 12 8 365 3 353 2.93e-66 215
MsG0880044040.01.T01 MTR_7g111700 37.284 405 184 13 6 384 3 363 2.94e-66 214
MsG0880044040.01.T01 MTR_2g064950 38.281 384 173 16 16 362 8 364 1.09e-65 214
MsG0880044040.01.T01 MTR_5g024260 38.168 393 188 15 6 365 13 383 2.18e-65 214
MsG0880044040.01.T01 MTR_2g021770 35.071 422 212 14 3 382 2 403 2.87e-65 213
MsG0880044040.01.T01 MTR_6g478230 36.643 423 201 13 1 382 7 403 4.70e-64 210
MsG0880044040.01.T01 MTR_1g007410 37.470 411 179 16 15 378 19 398 4.99e-64 210
MsG0880044040.01.T01 MTR_5g091140 39.096 376 167 14 17 362 47 390 1.14e-63 209
MsG0880044040.01.T01 MTR_4g130330 36.275 408 196 16 14 381 3 386 1.36e-63 208
MsG0880044040.01.T01 MTR_4g014370 35.697 423 200 16 8 381 5 404 2.65e-63 208
MsG0880044040.01.T01 MTR_5g092850 35.084 419 196 12 14 385 12 401 1.14e-62 206
MsG0880044040.01.T01 MTR_8g036970 38.136 354 161 11 22 368 2 304 9.99e-62 203
MsG0880044040.01.T01 MTR_8g064790 36.203 395 175 14 1 381 1 332 2.11e-61 201
MsG0880044040.01.T01 MTR_8g063330 38.753 369 171 14 7 344 5 349 2.72e-60 202
MsG0880044040.01.T01 MTR_8g013000 39.362 376 167 15 16 352 8 361 5.26e-60 199
MsG0880044040.01.T01 MTR_5g072060 35.526 380 179 10 16 364 4 348 1.52e-58 201
MsG0880044040.01.T01 MTR_2g066150 36.735 392 190 14 7 381 5 355 1.81e-58 194
MsG0880044040.01.T01 MTR_1g007430 37.243 341 168 10 29 346 7 324 2.69e-58 192
MsG0880044040.01.T01 MTR_5g074850 35.523 411 194 17 1 368 22 404 1.16e-57 202
MsG0880044040.01.T01 MTR_5g075370 34.913 401 193 17 13 368 3 380 1.91e-55 195
MsG0880044040.01.T01 MTR_7g016930 39.766 342 148 13 5 325 7 311 2.10e-54 183
MsG0880044040.01.T01 MTR_8g033000 38.381 383 157 16 55 382 1 359 3.46e-54 183
MsG0880044040.01.T01 MTR_1g098180 33.000 400 203 11 5 382 6 362 1.55e-52 179
MsG0880044040.01.T01 MTR_1g050308 35.079 382 175 12 7 381 27 342 1.58e-52 178
MsG0880044040.01.T01 MTR_4g007940 36.963 349 162 14 69 379 7 335 1.02e-51 176
MsG0880044040.01.T01 MTR_6g090250 32.426 441 212 16 5 382 3 420 3.57e-51 177
MsG0880044040.01.T01 MTR_5g022850 34.177 395 169 16 16 380 14 347 2.06e-50 173
MsG0880044040.01.T01 MTR_5g096900 40.881 318 151 16 16 310 10 313 3.07e-50 171
MsG0880044040.01.T01 MTR_5g068490 39.179 268 145 8 122 382 17 273 5.07e-50 170
MsG0880044040.01.T01 MTR_6g078010 33.058 363 182 13 54 386 4 335 5.15e-50 172
MsG0880044040.01.T01 MTR_5g064700 35.312 337 156 12 94 381 40 363 1.45e-49 171
MsG0880044040.01.T01 MTR_5g074800 35.127 353 181 11 57 378 1 336 2.50e-49 170
MsG0880044040.01.T01 MTR_8g063370 32.836 402 212 19 1 377 15 383 3.60e-47 166
MsG0880044040.01.T01 MTR_5g043605 39.437 284 137 14 123 382 63 335 4.28e-47 164
MsG0880044040.01.T01 MTR_5g092860 32.964 361 183 12 36 366 20 351 5.46e-45 159
MsG0880044040.01.T01 MTR_1g050312 37.153 288 145 10 86 365 13 272 5.84e-45 157
MsG0880044040.01.T01 MTR_5g076490 34.877 367 163 13 55 381 1 331 2.14e-43 154
MsG0880044040.01.T01 MTR_6g079790 37.241 290 143 10 130 382 18 305 2.48e-43 153
MsG0880044040.01.T01 MTR_8g063310 29.630 405 232 17 1 377 9 388 2.27e-42 153
MsG0880044040.01.T01 MTR_1g047080 36.416 346 135 14 55 382 1 279 1.06e-41 148
MsG0880044040.01.T01 MTR_5g097820 37.828 267 146 9 5 258 10 269 1.25e-41 147
MsG0880044040.01.T01 MTR_8g063350 31.937 382 177 15 1 362 1 319 1.61e-41 149
MsG0880044040.01.T01 MTR_7g104710 35.780 327 143 15 5 306 8 292 3.30e-41 148
MsG0880044040.01.T01 MTR_2g021920 38.776 245 119 10 166 381 26 268 6.93e-40 143
MsG0880044040.01.T01 MTR_5g086590 38.261 230 123 10 143 360 9 231 4.09e-39 140
MsG0880044040.01.T01 MTR_8g073570 44.920 187 75 8 10 186 2 170 1.72e-38 136
MsG0880044040.01.T01 MTR_6g070880 37.603 242 99 7 15 221 29 253 3.32e-38 138
MsG0880044040.01.T01 MTR_6g071420 37.603 242 99 7 15 221 29 253 3.32e-38 138
MsG0880044040.01.T01 MTR_6g004450 42.035 226 104 9 175 382 49 265 3.28e-37 136
MsG0880044040.01.T01 MTR_6g087620 31.429 315 153 11 89 376 1 279 3.49e-37 136
MsG0880044040.01.T01 MTR_1g076810 40.870 230 104 11 17 230 17 230 6.78e-37 142
MsG0880044040.01.T01 MTR_2g104260 36.271 295 141 11 1 266 1 277 2.75e-36 134
MsG0880044040.01.T01 MTR_1g115205 37.786 262 96 9 8 246 19 236 4.76e-36 132
MsG0880044040.01.T01 MTR_5g094350 34.812 293 123 11 16 271 11 272 1.34e-35 132
MsG0880044040.01.T01 MTR_5g037190 34.386 285 119 11 4 260 6 250 6.01e-34 127
MsG0880044040.01.T01 MTR_6g465360 38.197 233 100 8 5 214 53 264 1.10e-33 127
MsG0880044040.01.T01 MTR_7g023800 30.769 351 164 13 57 377 1 302 5.51e-33 125
MsG0880044040.01.T01 MTR_5g023970 40.323 186 101 5 205 382 9 192 6.69e-33 122
MsG0880044040.01.T01 MTR_5g097850 33.948 271 117 9 130 381 13 240 1.77e-31 120
MsG0880044040.01.T01 MTR_4g016000 39.409 203 95 9 152 339 2 191 3.45e-30 115
MsG0880044040.01.T01 MTR_6g090260 36.923 195 99 8 205 382 73 260 1.00e-28 113
MsG0880044040.01.T01 MTR_6g090260 60.317 63 22 1 5 67 10 69 1.64e-15 76.3
MsG0880044040.01.T01 MTR_3g018750 33.745 243 122 8 175 384 3 239 1.44e-28 112
MsG0880044040.01.T01 MTR_5g097650 41.358 162 72 3 5 164 9 149 1.09e-27 107
MsG0880044040.01.T01 MTR_3g019290 37.719 228 71 8 5 213 3 178 2.50e-27 107
MsG0880044040.01.T01 MTR_5g098950 35.321 218 100 7 143 346 84 274 1.24e-26 107
MsG0880044040.01.T01 MTR_6g009350 38.421 190 98 7 176 350 9 194 1.66e-26 105
MsG0880044040.01.T01 MTR_2g028160 24.500 400 248 11 21 383 8 390 2.03e-26 109
MsG0880044040.01.T01 MTR_4g014370 45.070 142 57 5 8 145 16 140 1.13e-25 106
MsG0880044040.01.T01 MTR_4g014370 33.514 185 107 7 207 381 154 332 7.10e-22 95.9
MsG0880044040.01.T01 MTR_7g019250 34.667 225 110 9 161 365 206 413 3.60e-24 103
MsG0880044040.01.T01 MTR_2g031720 25.858 379 219 14 14 364 2 346 4.79e-24 102
MsG0880044040.01.T01 MTR_1g094210 26.994 326 183 12 10 322 49 332 1.19e-23 101
MsG0880044040.01.T01 MTR_1g094210 26.994 326 183 12 10 322 49 332 1.53e-23 101
MsG0880044040.01.T01 MTR_3g030620 41.667 156 75 7 239 380 23 176 5.92e-23 95.1
MsG0880044040.01.T01 MTR_5g097660 44.144 111 60 1 277 385 9 119 1.59e-22 92.0
MsG0880044040.01.T01 MTR_1g097330 25.600 375 211 14 20 368 18 350 5.74e-22 97.1
MsG0880044040.01.T01 MTR_5g066420 35.374 147 83 3 239 374 1 146 1.16e-21 90.9
MsG0880044040.01.T01 MTR_5g096920 37.086 151 91 3 239 385 1 151 1.43e-21 90.5
MsG0880044040.01.T01 MTR_4g070550 24.874 398 241 14 21 383 8 382 1.68e-21 95.5
MsG0880044040.01.T01 MTR_1g037540 28.045 353 218 12 21 343 8 354 3.19e-21 94.7
MsG0880044040.01.T01 MTR_1g009110 29.129 333 185 17 21 329 17 322 3.27e-21 94.4
MsG0880044040.01.T01 MTR_5g097210 26.178 382 233 15 21 386 12 360 4.65e-21 94.0
MsG0880044040.01.T01 MTR_4g133170 26.075 372 211 18 21 367 7 339 7.58e-21 93.6
MsG0880044040.01.T01 MTR_2g021150 26.357 387 224 16 20 380 16 367 1.50e-20 92.4
MsG0880044040.01.T01 MTR_5g096070 37.356 174 63 6 16 182 24 158 8.34e-20 85.9
MsG0880044040.01.T01 MTR_5g097540 37.762 143 82 5 206 346 96 233 1.45e-19 88.6
MsG0880044040.01.T01 MTR_6g079730 34.694 147 85 5 246 382 1 146 1.06e-18 82.4
MsG0880044040.01.T01 MTR_3g083010 25.301 415 246 16 14 383 2 397 1.89e-18 86.7
MsG0880044040.01.T01 MTR_8g041440 42.982 114 41 3 17 126 14 107 2.46e-18 80.5
MsG0880044040.01.T01 MTR_5g036250 48.276 87 43 2 298 383 23 108 4.04e-18 82.0
MsG0880044040.01.T01 MTR_2g021050 24.590 366 214 14 21 364 8 333 4.04e-18 85.5
MsG0880044040.01.T01 MTR_2g028130 24.359 390 221 17 21 364 8 369 4.65e-18 85.5
MsG0880044040.01.T01 MTR_3g047580 32.515 163 67 5 4 161 3 127 4.73e-18 80.1
MsG0880044040.01.T01 MTR_5g091150 35.602 191 67 11 103 271 4 160 5.01e-18 82.0
MsG0880044040.01.T01 MTR_4g023080 27.597 308 185 10 21 323 12 286 1.73e-17 83.2
MsG0880044040.01.T01 MTR_4g023090 25.982 331 207 10 1 322 1 302 2.98e-17 82.8
MsG0880044040.01.T01 MTR_7g017150 40.323 124 64 5 206 322 81 201 3.28e-17 81.3
MsG0880044040.01.T01 MTR_1g068860 25.758 396 226 16 21 386 7 364 3.67e-17 82.8
MsG0880044040.01.T01 MTR_0044s0300 26.124 356 192 16 21 351 41 350 5.13e-17 82.4
MsG0880044040.01.T01 MTR_8g062660 26.220 328 179 14 21 322 25 315 5.97e-17 83.2
MsG0880044040.01.T01 MTR_7g017120 41.129 124 63 6 206 322 80 200 6.40e-17 80.5
MsG0880044040.01.T01 MTR_6g021880 26.821 302 197 9 29 322 31 316 6.78e-17 82.0
MsG0880044040.01.T01 MTR_0115s0020 26.119 402 234 21 21 380 13 393 8.60e-17 81.6
MsG0880044040.01.T01 MTR_5g022420 25.281 356 220 15 20 368 29 345 1.48e-16 80.9
MsG0880044040.01.T01 MTR_7g101200 31.731 208 108 10 149 343 40 226 1.69e-16 78.6
MsG0880044040.01.T01 MTR_2g047832 26.000 350 200 14 5 322 10 332 6.51e-16 79.3
MsG0880044040.01.T01 MTR_1g054575 25.938 320 178 14 20 322 54 331 6.63e-16 79.7
MsG0880044040.01.T01 MTR_5g070088 27.414 321 212 9 14 322 3 314 7.92e-16 78.6
MsG0880044040.01.T01 MTR_3g103020 27.812 320 178 14 21 322 23 307 9.95e-16 78.6
MsG0880044040.01.T01 MTR_4g023070 27.885 312 187 14 21 322 6 289 1.32e-15 77.8
MsG0880044040.01.T01 MTR_3g036335 24.286 350 201 16 21 350 44 349 1.66e-15 77.8
MsG0880044040.01.T01 MTR_4g021785 25.867 375 223 17 21 380 12 346 1.84e-15 77.4
MsG0880044040.01.T01 MTR_1g050542 25.464 377 218 15 20 372 60 397 2.12e-15 77.4
MsG0880044040.01.T01 MTR_3g006670 28.660 321 174 15 21 322 52 336 2.41e-15 77.4
MsG0880044040.01.T01 MTR_2g461450 25.309 324 193 11 11 323 11 296 3.10e-15 76.6
MsG0880044040.01.T01 MTR_2g426090 23.780 328 188 11 26 322 14 310 4.53e-15 76.6
MsG0880044040.01.T01 MTR_2g426060 23.174 397 240 13 21 381 9 376 4.59e-15 76.6
MsG0880044040.01.T01 MTR_3g024150 26.115 314 185 14 21 322 38 316 5.06e-15 76.3
MsG0880044040.01.T01 MTR_1g068875 24.936 389 235 14 21 386 7 361 5.66e-15 76.3
MsG0880044040.01.T01 MTR_3g034130 26.586 331 177 15 21 322 12 305 6.47e-15 75.9
MsG0880044040.01.T01 MTR_1g054725 24.478 335 210 12 5 325 7 312 8.07e-15 75.5
MsG0880044040.01.T01 MTR_2g055970 25.857 321 183 15 20 322 213 496 1.09e-14 75.9
MsG0880044040.01.T01 MTR_8g013010 28.195 266 145 12 17 266 53 288 1.10e-14 74.7
MsG0880044040.01.T01 MTR_4g117720 27.178 287 165 11 128 386 104 374 1.15e-14 75.1
MsG0880044040.01.T01 MTR_4g023440 25.610 328 175 13 1 323 1 264 1.18e-14 74.7
MsG0880044040.01.T01 MTR_4g117770 28.528 326 174 18 17 322 10 296 1.26e-14 75.1
MsG0880044040.01.T01 MTR_4g117810 28.528 326 174 18 17 322 10 296 1.26e-14 75.1
MsG0880044040.01.T01 MTR_5g070080 29.245 318 194 14 21 322 13 315 2.10e-14 74.3
MsG0880044040.01.T01 MTR_3g010870 25.472 318 179 14 21 322 40 315 4.55e-14 73.6
MsG0880044040.01.T01 MTR_3g011060 27.077 325 188 16 21 325 31 326 4.99e-14 73.2
MsG0880044040.01.T01 MTR_6g065980 23.864 352 223 12 21 368 19 329 6.54e-14 72.8
MsG0880044040.01.T01 MTR_4g094365 27.215 316 184 14 21 322 11 294 6.84e-14 72.8
MsG0880044040.01.T01 MTR_2g031640 23.529 272 176 11 121 364 75 342 6.87e-14 72.8
MsG0880044040.01.T01 MTR_3g024110 25.949 316 178 15 21 322 104 377 7.12e-14 73.2
MsG0880044040.01.T01 MTR_3g030250 25.714 315 177 11 21 322 40 310 7.90e-14 72.8
MsG0880044040.01.T01 MTR_4g013185 27.168 346 189 15 20 322 12 337 8.16e-14 72.8
MsG0880044040.01.T01 MTR_5g010550 26.923 338 195 14 26 322 52 378 8.25e-14 73.2
MsG0880044040.01.T01 MTR_3g013770 25.513 341 196 13 4 322 19 323 9.25e-14 72.4
MsG0880044040.01.T01 MTR_2g426070 24.259 371 225 15 26 364 14 360 9.37e-14 72.4
MsG0880044040.01.T01 MTR_2g029990 25.862 348 208 17 21 350 54 369 9.53e-14 72.4
MsG0880044040.01.T01 MTR_8g467140 25.559 313 194 12 20 322 34 317 1.04e-13 72.0
MsG0880044040.01.T01 MTR_5g010550 26.923 338 195 14 26 322 66 392 1.08e-13 72.8
MsG0880044040.01.T01 MTR_3g007360 26.269 335 171 18 26 327 60 351 1.10e-13 72.4
MsG0880044040.01.T01 MTR_2g025420 23.547 344 191 13 21 322 9 322 1.23e-13 72.4
MsG0880044040.01.T01 MTR_3g007410 25.970 335 172 17 26 327 60 351 1.41e-13 72.0
MsG0880044040.01.T01 MTR_1g055375 24.688 320 199 13 16 320 2 294 1.50e-13 71.6
MsG0880044040.01.T01 MTR_2g022020 36.735 98 61 1 283 380 18 114 1.86e-13 67.0
MsG0880044040.01.T01 MTR_7g055870 25.833 360 186 13 18 323 13 345 2.00e-13 71.6
MsG0880044040.01.T01 MTR_3g009310 26.032 315 187 14 21 322 45 326 2.15e-13 71.2
MsG0880044040.01.T01 MTR_2g031700 26.070 257 142 8 21 264 9 230 2.22e-13 70.5
MsG0880044040.01.T01 MTR_2g025960 26.126 222 120 8 134 322 5 215 2.26e-13 70.9
MsG0880044040.01.T01 MTR_3g030350 25.237 317 186 14 21 323 38 317 2.38e-13 71.2
MsG0880044040.01.T01 MTR_3g011020 26.168 321 177 13 21 325 31 307 2.77e-13 70.9
MsG0880044040.01.T01 MTR_5g056020 25.549 364 206 11 6 325 5 347 2.80e-13 71.6
MsG0880044040.01.T01 MTR_5g086780 69.388 49 13 1 16 62 14 62 3.31e-13 68.9
MsG0880044040.01.T01 MTR_5g086780 43.210 81 45 1 283 363 148 227 2.42e-12 66.6
MsG0880044040.01.T01 MTR_3g006500 23.469 392 225 16 21 380 20 368 3.92e-13 70.5
MsG0880044040.01.T01 MTR_5g010560 26.786 336 192 15 26 320 52 374 4.07e-13 70.9
MsG0880044040.01.T01 MTR_3g007330 24.272 309 185 11 26 322 56 327 4.61e-13 70.5
MsG0880044040.01.T01 MTR_5g010610 25.970 335 195 15 26 320 42 363 5.80e-13 70.5
MsG0880044040.01.T01 MTR_7g056710 24.719 356 201 13 1 329 3 318 6.05e-13 70.1
MsG0880044040.01.T01 MTR_3g058440 25.869 259 151 9 21 264 38 270 6.13e-13 69.3
MsG0880044040.01.T01 MTR_2g078900 24.688 320 186 14 21 325 36 315 6.25e-13 69.7
MsG0880044040.01.T01 MTR_0267s0050 23.291 395 246 12 26 384 14 387 1.19e-12 69.3
MsG0880044040.01.T01 MTR_3g007430 25.078 319 176 16 26 322 51 328 1.26e-12 68.9
MsG0880044040.01.T01 MTR_3g072470 24.930 357 205 13 2 323 4 332 1.33e-12 69.3
MsG0880044040.01.T01 MTR_1g115160 26.006 323 176 16 17 322 21 297 1.71e-12 68.6
MsG0880044040.01.T01 MTR_3g034180 23.250 400 254 14 8 383 113 483 1.73e-12 68.9
MsG0880044040.01.T01 MTR_4g108820 23.779 307 168 9 20 322 44 288 1.78e-12 68.2
MsG0880044040.01.T01 MTR_3g006530 25.000 324 188 16 21 325 43 330 1.79e-12 68.6
MsG0880044040.01.T01 MTR_6g046320 24.457 368 213 16 26 346 47 396 2.12e-12 68.6
MsG0880044040.01.T01 MTR_3g058470 23.754 341 188 12 21 342 40 327 2.32e-12 68.2
MsG0880044040.01.T01 MTR_3g036430 22.977 309 178 11 21 325 23 275 3.07e-12 67.8
MsG0880044040.01.T01 MTR_3g030330 24.601 313 186 11 21 322 23 296 3.14e-12 67.8
MsG0880044040.01.T01 MTR_3g007270 23.385 325 195 13 21 322 50 343 3.77e-12 67.8
MsG0880044040.01.T01 MTR_2g024100 25.392 319 177 13 33 321 22 309 4.14e-12 67.4
MsG0880044040.01.T01 MTR_3g034160 25.602 332 193 15 21 329 12 312 4.25e-12 67.4
MsG0880044040.01.T01 MTR_4g031770 23.003 313 196 11 21 320 7 287 4.53e-12 67.4
MsG0880044040.01.T01 MTR_4g117780 26.667 315 186 13 21 322 14 296 4.57e-12 67.4
MsG0880044040.01.T01 MTR_4g023130 29.016 193 122 4 134 322 63 244 5.25e-12 66.6
MsG0880044040.01.T01 MTR_2g024110 23.125 320 191 14 21 320 7 291 6.14e-12 67.0
MsG0880044040.01.T01 MTR_3g047540 45.349 86 43 3 206 290 5 87 6.30e-12 61.6
MsG0880044040.01.T01 MTR_5g096050 45.833 72 36 1 256 324 32 103 7.96e-12 62.4
MsG0880044040.01.T01 MTR_7g028660 24.129 373 228 15 20 363 13 359 8.27e-12 66.6
MsG0880044040.01.T01 MTR_3g058480 23.684 266 164 8 21 271 42 283 9.39e-12 65.9
MsG0880044040.01.T01 MTR_1g055070 24.723 271 172 10 21 274 52 307 1.08e-11 66.2
MsG0880044040.01.T01 MTR_2g021190 25.392 319 192 14 21 325 24 310 1.17e-11 65.9
MsG0880044040.01.T01 MTR_8g099460 24.603 378 215 17 21 364 8 349 1.35e-11 65.9
MsG0880044040.01.T01 MTR_4g117750 26.316 342 196 14 31 355 16 318 1.41e-11 66.2
MsG0880044040.01.T01 MTR_4g109280 26.629 353 199 13 17 347 7 321 1.49e-11 65.5
MsG0880044040.01.T01 MTR_3g010970 24.516 310 186 11 21 322 51 320 1.74e-11 65.5
MsG0880044040.01.T01 MTR_5g027330 25.077 323 206 14 22 326 44 348 2.21e-11 65.5
MsG0880044040.01.T01 MTR_6g087660 56.140 57 22 1 7 63 10 63 4.46e-11 62.0
MsG0880044040.01.T01 MTR_5g027370 24.224 322 210 13 22 326 33 337 7.23e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044040.01.T01 AT3G06240 25.132 378 237 15 21 367 39 401 2.07e-21 95.5
MsG0880044040.01.T01 AT1G30790 26.087 322 192 12 17 318 8 303 3.03e-15 77.0
MsG0880044040.01.T01 AT4G12560 22.460 374 234 14 21 366 7 352 1.73e-14 75.1
MsG0880044040.01.T01 AT4G12560 22.460 374 234 14 21 366 7 352 1.73e-14 75.1
MsG0880044040.01.T01 AT4G12560 22.460 374 234 14 21 366 7 352 1.73e-14 75.1
MsG0880044040.01.T01 AT3G17490 27.647 340 200 14 17 343 5 311 1.35e-13 72.0
MsG0880044040.01.T01 AT3G22350 26.190 336 203 16 21 341 7 312 1.64e-13 71.6
MsG0880044040.01.T01 AT3G17480 24.438 356 222 14 10 347 4 330 5.67e-13 70.1
MsG0880044040.01.T01 AT3G21170 23.580 352 207 14 20 345 9 324 7.43e-11 63.5
MsG0880044040.01.T01 AT3G18330 26.115 314 192 14 21 320 9 296 8.16e-11 63.5

Find 94 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCTCTTTCCATTCTTTC+TGG 0.082776 8:+34689018 MsG0880044040.01.T01:CDS
GTTCAGGAAATTGAAGTTAA+TGG 0.190105 8:+34689837 MsG0880044040.01.T01:CDS
CGGAACAGGTTCATGAAATT+AGG 0.198222 8:-34688913 None:intergenic
TTGGGCTCTGCCAGTGTTAA+TGG 0.233820 8:+34689150 MsG0880044040.01.T01:CDS
CTTCAATTTCCTGAACTCTT+TGG 0.236440 8:-34689830 None:intergenic
TGGTGAAAGGTTTGAGATTA+GGG 0.264245 8:+34689038 MsG0880044040.01.T01:CDS
GGTTCATGAAATTAGGGTTT+TGG 0.266620 8:-34688906 None:intergenic
GAGTGATTTGAGAGGTAATT+TGG 0.282077 8:-34688842 None:intergenic
CTGGTGAAAGGTTTGAGATT+AGG 0.286922 8:+34689037 MsG0880044040.01.T01:CDS
GCAAGAACCGGGTATTCTTC+AGG 0.303361 8:+34689769 MsG0880044040.01.T01:CDS
GTGTTTGGATTTGAGGAAAT+TGG 0.311570 8:-34688938 None:intergenic
TTCAATTTCCTGAACTCTTT+GGG 0.317821 8:-34689829 None:intergenic
TTTCCCAGGTATAACGTCTA+TGG 0.318832 8:+34689446 MsG0880044040.01.T01:CDS
GCAGAGCCCAAAATGAAAAT+AGG 0.338594 8:-34689138 None:intergenic
CATCATCGTGTTTGGATTTG+AGG 0.354241 8:-34688945 None:intergenic
TTTAAGTACCCAAAGAGTTC+AGG 0.361418 8:+34689821 MsG0880044040.01.T01:CDS
TTCAGCGTCATCATCGTGTT+TGG 0.367299 8:-34688953 None:intergenic
ATGAAAATAGGAATGGAAAA+AGG 0.377261 8:-34689126 None:intergenic
GAGACAATCGAACAATTATA+AGG 0.379375 8:-34689729 None:intergenic
GAGAGGTAATTTGGAGAGAA+TGG 0.379422 8:-34688833 None:intergenic
ACAATAAATTATTCATTCCT+AGG 0.381032 8:-34689906 None:intergenic
GGAACAGGTTCATGAAATTA+GGG 0.387248 8:-34688912 None:intergenic
TGAGGAAATTGGTGCGGAAC+AGG 0.387383 8:-34688927 None:intergenic
TCCTCATATTGGAACGGTTA+GGG 0.398588 8:+34688983 MsG0880044040.01.T01:CDS
TGAATTGCGTCTCCTCATAT+TGG 0.406724 8:+34688972 MsG0880044040.01.T01:CDS
TTTCCATTCTTTCTGGTGAA+AGG 0.407472 8:+34689025 MsG0880044040.01.T01:CDS
ATAGCCTGAGGAGTGATTCT+TGG 0.409951 8:+34689388 MsG0880044040.01.T01:CDS
GTTATACCTGGGAAATAATC+AGG 0.410974 8:-34689438 None:intergenic
GAATTTGAAGGCAAGTTGTA+TGG 0.414534 8:+34689348 MsG0880044040.01.T01:CDS
TCACAGTAGGGAGCAAGAAC+CGG 0.415708 8:+34689757 MsG0880044040.01.T01:CDS
TTACTTGTGCTAACAAATCA+TGG 0.416903 8:+34688872 MsG0880044040.01.T01:CDS
GCATTGGCATCTTGTTGAAA+TGG 0.419063 8:-34689081 None:intergenic
GATATACCTGATTATTTCCC+AGG 0.424102 8:+34689432 MsG0880044040.01.T01:CDS
AGATTAGGGCTAATTTAGAT+TGG 0.425790 8:+34689052 MsG0880044040.01.T01:CDS
AAGTTTCGTCCTCATGGGTT+TGG 0.429496 8:+34689270 MsG0880044040.01.T01:CDS
AATTATTCATTCCTAGGAAA+AGG 0.441892 8:-34689900 None:intergenic
AAAGAATGGAAAGAGATTGC+TGG 0.442150 8:-34689014 None:intergenic
AAGGGTCAACGACTGTGTTA+TGG 0.442433 8:+34689190 MsG0880044040.01.T01:CDS
AGGCTATATATCTCCCAAAA+AGG 0.444617 8:-34689372 None:intergenic
CTCCTCATATTGGAACGGTT+AGG 0.448958 8:+34688982 MsG0880044040.01.T01:CDS
AAACCTTTCACCAGAAAGAA+TGG 0.449110 8:-34689028 None:intergenic
GGACCAAGATGTTTGTTGTC+GGG 0.456475 8:+34689706 MsG0880044040.01.T01:CDS
CAACTTGCCTTCAAATTCCA+TGG 0.456492 8:-34689343 None:intergenic
ACGTCTATGGTGAACTTGAA+TGG 0.456821 8:+34689459 MsG0880044040.01.T01:CDS
AAAACCCAGATATGAAAATC+AGG 0.463246 8:-34689657 None:intergenic
ACCCTAACCGTTCCAATATG+AGG 0.473601 8:-34688984 None:intergenic
ATGGAAAGAGATTGCTGGAT+GGG 0.481009 8:-34689009 None:intergenic
TTTGGGTGAAGTGGGTGTCA+AGG 0.482874 8:+34689677 MsG0880044040.01.T01:CDS
GAAAACAAGTTTCGTCCTCA+TGG 0.483413 8:+34689264 MsG0880044040.01.T01:CDS
TCCATTGGTTGATAGCTTGG+TGG 0.484534 8:-34689243 None:intergenic
CACAGTAGGGAGCAAGAACC+GGG 0.486712 8:+34689758 MsG0880044040.01.T01:CDS
ATCGGCATCGGCATCGGCAT+TGG 0.488117 8:-34689097 None:intergenic
AGGAGCATCGGCATCGGCAT+CGG 0.499881 8:-34689103 None:intergenic
ACATATCCCATGGAATTTGA+AGG 0.501492 8:+34689336 MsG0880044040.01.T01:CDS
TTCTTGCTCCCTACTGTGAT+AGG 0.502076 8:-34689753 None:intergenic
ATTCTTGGAGGAAACTCGAC+GGG 0.509283 8:+34689403 MsG0880044040.01.T01:CDS
CAAGAACCGGGTATTCTTCA+GGG 0.511631 8:+34689770 MsG0880044040.01.T01:CDS
AAGTGGGTGTCAAGGAATCA+TGG 0.512285 8:+34689685 MsG0880044040.01.T01:CDS
TCCTCCAAGAATCACTCCTC+AGG 0.515008 8:-34689392 None:intergenic
CTAACCTTCTTATTCTTCGA+AGG 0.516954 8:-34688769 None:intergenic
CTTCTTCCCTGAAGAATACC+CGG 0.518177 8:-34689776 None:intergenic
GCCTGAGGAGTGATTCTTGG+AGG 0.527158 8:+34689391 MsG0880044040.01.T01:CDS
TGGACCAAGATGTTTGTTGT+CGG 0.532794 8:+34689705 MsG0880044040.01.T01:CDS
AAAACAAGTTTCGTCCTCAT+GGG 0.535509 8:+34689265 MsG0880044040.01.T01:CDS
ATTGTCTCTCCTATCACAGT+AGG 0.540279 8:+34689744 MsG0880044040.01.T01:CDS
TGTTACATCTGAAGAAGGTA+AGG 0.542146 8:-34689562 None:intergenic
ATAACACAGTCGTTGACCCT+TGG 0.545293 8:-34689188 None:intergenic
TCTTTAATTCTGAGGTTGCA+AGG 0.547886 8:-34689215 None:intergenic
GCCCAAAATGAAAATAGGAA+TGG 0.550650 8:-34689133 None:intergenic
CTGTCATCTATAATTACGAC+AGG 0.552750 8:+34689631 MsG0880044040.01.T01:CDS
TTCACCATAGACGTTATACC+TGG 0.552844 8:-34689450 None:intergenic
AGGCCCGACAACAAACATCT+TGG 0.554671 8:-34689709 None:intergenic
CTATATGTTACATCTGAAGA+AGG 0.554983 8:-34689567 None:intergenic
TATATCATTATCATGTCTAT+CGG 0.569594 8:-34689499 None:intergenic
AACTTGCCTTCAAATTCCAT+GGG 0.569798 8:-34689342 None:intergenic
TGGAATGATCTTTAATTCTG+AGG 0.580619 8:-34689223 None:intergenic
AATGGAAAGAGATTGCTGGA+TGG 0.582929 8:-34689010 None:intergenic
AAAAGGAGGAGCATCGGCAT+CGG 0.584852 8:-34689109 None:intergenic
GCATCTTGTTGAAATGGAAG+TGG 0.587344 8:-34689075 None:intergenic
TGCGTCTCCTCATATTGGAA+CGG 0.587482 8:+34688977 MsG0880044040.01.T01:CDS
TCGGAAGCTTACATATCCCA+TGG 0.597239 8:+34689326 MsG0880044040.01.T01:CDS
TGTCTCGCTGCTAAAGTCAA+AGG 0.603852 8:-34689526 None:intergenic
TGATCCTTCGAAGAATAAGA+AGG 0.604412 8:+34688765 MsG0880044040.01.T01:CDS
TTGTCTCTCCTATCACAGTA+GGG 0.604714 8:+34689745 MsG0880044040.01.T01:CDS
TTTGGGAGATATATAGCCTG+AGG 0.606711 8:+34689376 MsG0880044040.01.T01:CDS
ATTCTTCGAAGGATCAGCCA+TGG 0.607630 8:-34688758 None:intergenic
TCCACCAAGCTATCAACCAA+TGG 0.620990 8:+34689242 MsG0880044040.01.T01:CDS
AAACGTTTGAGTGATTTGAG+AGG 0.642067 8:-34688850 None:intergenic
GATTCTTGGAGGAAACTCGA+CGG 0.647438 8:+34689402 MsG0880044040.01.T01:CDS
CATGTCTATCGGTAAACCAG+TGG 0.662820 8:-34689488 None:intergenic
TCACCATAGACGTTATACCT+GGG 0.698186 8:-34689449 None:intergenic
TGGATTTGAGGAAATTGGTG+CGG 0.706393 8:-34688933 None:intergenic
TTCTTGGAGGAAACTCGACG+GGG 0.714609 8:+34689404 MsG0880044040.01.T01:CDS
CAGTCATAACCAAACCCATG+AGG 0.725862 8:-34689279 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATCATTATCATGTCTAT+CGG - Chr8:34689502-34689521 None:intergenic 20.0%
!!! TAGATCATACAATTTTAACT+TGG + Chr8:34689587-34689606 MsG0880044040.01.T01:CDS 20.0%
! ATGAAAATAGGAATGGAAAA+AGG - Chr8:34689129-34689148 None:intergenic 25.0%
!! ATTTCACATTGCAATTTTCA+AGG + Chr8:34689866-34689885 MsG0880044040.01.T01:CDS 25.0%
!! CTGTGTTACAAATGATTTTA+AGG + Chr8:34689299-34689318 MsG0880044040.01.T01:CDS 25.0%
!! TCCATTCCTATTTTCATTTT+GGG + Chr8:34689132-34689151 MsG0880044040.01.T01:CDS 25.0%
!! TTCCATTCCTATTTTCATTT+TGG + Chr8:34689131-34689150 MsG0880044040.01.T01:CDS 25.0%
!!! ATCATACAATTTTAACTTGG+TGG + Chr8:34689590-34689609 MsG0880044040.01.T01:CDS 25.0%
!!! CAAATGATTTTAAGGTGATT+CGG + Chr8:34689307-34689326 MsG0880044040.01.T01:CDS 25.0%
AAAACCCAGATATGAAAATC+AGG - Chr8:34689660-34689679 None:intergenic 30.0%
AAAATAGGAATGGAAAAAGG+AGG - Chr8:34689126-34689145 None:intergenic 30.0%
AGATTAGGGCTAATTTAGAT+TGG + Chr8:34689052-34689071 MsG0880044040.01.T01:CDS 30.0%
CTATATGTTACATCTGAAGA+AGG - Chr8:34689570-34689589 None:intergenic 30.0%
GAGACAATCGAACAATTATA+AGG - Chr8:34689732-34689751 None:intergenic 30.0%
GTTCAGGAAATTGAAGTTAA+TGG + Chr8:34689837-34689856 MsG0880044040.01.T01:CDS 30.0%
TGGAATGATCTTTAATTCTG+AGG - Chr8:34689226-34689245 None:intergenic 30.0%
TTACTTGTGCTAACAAATCA+TGG + Chr8:34688872-34688891 MsG0880044040.01.T01:CDS 30.0%
TTCAATTTCCTGAACTCTTT+GGG - Chr8:34689832-34689851 None:intergenic 30.0%
! GATTTTCATATCTGGGTTTT+GGG + Chr8:34689660-34689679 MsG0880044040.01.T01:CDS 30.0%
! TGATTTTCATATCTGGGTTT+TGG + Chr8:34689659-34689678 MsG0880044040.01.T01:CDS 30.0%
AAAACAAGTTTCGTCCTCAT+GGG + Chr8:34689265-34689284 MsG0880044040.01.T01:CDS 35.0%
AAACCTTTCACCAGAAAGAA+TGG - Chr8:34689031-34689050 None:intergenic 35.0%
AAACGTTTGAGTGATTTGAG+AGG - Chr8:34688853-34688872 None:intergenic 35.0%
AAAGAATGGAAAGAGATTGC+TGG - Chr8:34689017-34689036 None:intergenic 35.0%
AACTTGCCTTCAAATTCCAT+GGG - Chr8:34689345-34689364 None:intergenic 35.0%
ACATATCCCATGGAATTTGA+AGG + Chr8:34689336-34689355 MsG0880044040.01.T01:CDS 35.0%
AGGCTATATATCTCCCAAAA+AGG - Chr8:34689375-34689394 None:intergenic 35.0%
CAATCTCTTTCCATTCTTTC+TGG + Chr8:34689018-34689037 MsG0880044040.01.T01:CDS 35.0%
CTAACCTTCTTATTCTTCGA+AGG - Chr8:34688772-34688791 None:intergenic 35.0%
CTGTCATCTATAATTACGAC+AGG + Chr8:34689631-34689650 MsG0880044040.01.T01:CDS 35.0%
CTTCAATTTCCTGAACTCTT+TGG - Chr8:34689833-34689852 None:intergenic 35.0%
GAATTTGAAGGCAAGTTGTA+TGG + Chr8:34689348-34689367 MsG0880044040.01.T01:CDS 35.0%
GAGTGATTTGAGAGGTAATT+TGG - Chr8:34688845-34688864 None:intergenic 35.0%
GATATACCTGATTATTTCCC+AGG + Chr8:34689432-34689451 MsG0880044040.01.T01:CDS 35.0%
GCCCAAAATGAAAATAGGAA+TGG - Chr8:34689136-34689155 None:intergenic 35.0%
GGAACAGGTTCATGAAATTA+GGG - Chr8:34688915-34688934 None:intergenic 35.0%
GTGTTTGGATTTGAGGAAAT+TGG - Chr8:34688941-34688960 None:intergenic 35.0%
GTTATACCTGGGAAATAATC+AGG - Chr8:34689441-34689460 None:intergenic 35.0%
TGATCCTTCGAAGAATAAGA+AGG + Chr8:34688765-34688784 MsG0880044040.01.T01:CDS 35.0%
TGTTACATCTGAAGAAGGTA+AGG - Chr8:34689565-34689584 None:intergenic 35.0%
TTTAAGTACCCAAAGAGTTC+AGG + Chr8:34689821-34689840 MsG0880044040.01.T01:CDS 35.0%
! AAAATCTGCTTCCTTTTCCT+AGG + Chr8:34689889-34689908 MsG0880044040.01.T01:CDS 35.0%
! CAAGTTGTATGGACCTTTTT+GGG + Chr8:34689359-34689378 MsG0880044040.01.T01:CDS 35.0%
! GGTTCATGAAATTAGGGTTT+TGG - Chr8:34688909-34688928 None:intergenic 35.0%
! TGGTGAAAGGTTTGAGATTA+GGG + Chr8:34689038-34689057 MsG0880044040.01.T01:CDS 35.0%
! TTTCCATTCTTTCTGGTGAA+AGG + Chr8:34689025-34689044 MsG0880044040.01.T01:CDS 35.0%
!! ACAAAAAGTGCCATTAACAC+TGG - Chr8:34689163-34689182 None:intergenic 35.0%
!! TCTTTAATTCTGAGGTTGCA+AGG - Chr8:34689218-34689237 None:intergenic 35.0%
!!! TTTTCCATTGGTTGATAGCT+TGG - Chr8:34689249-34689268 None:intergenic 35.0%
AATGGAAAGAGATTGCTGGA+TGG - Chr8:34689013-34689032 None:intergenic 40.0%
ACGTCTATGGTGAACTTGAA+TGG + Chr8:34689459-34689478 MsG0880044040.01.T01:CDS 40.0%
ATGGAAAGAGATTGCTGGAT+GGG - Chr8:34689012-34689031 None:intergenic 40.0%
ATTGTCTCTCCTATCACAGT+AGG + Chr8:34689744-34689763 MsG0880044040.01.T01:CDS 40.0%
CAACTTGCCTTCAAATTCCA+TGG - Chr8:34689346-34689365 None:intergenic 40.0%
CATCATCGTGTTTGGATTTG+AGG - Chr8:34688948-34688967 None:intergenic 40.0%
CGGAACAGGTTCATGAAATT+AGG - Chr8:34688916-34688935 None:intergenic 40.0%
GAAAACAAGTTTCGTCCTCA+TGG + Chr8:34689264-34689283 MsG0880044040.01.T01:CDS 40.0%
GAGAGGTAATTTGGAGAGAA+TGG - Chr8:34688836-34688855 None:intergenic 40.0%
GCAGAGCCCAAAATGAAAAT+AGG - Chr8:34689141-34689160 None:intergenic 40.0%
GCATCTTGTTGAAATGGAAG+TGG - Chr8:34689078-34689097 None:intergenic 40.0%
TCACCATAGACGTTATACCT+GGG - Chr8:34689452-34689471 None:intergenic 40.0%
TCCTCATATTGGAACGGTTA+GGG + Chr8:34688983-34689002 MsG0880044040.01.T01:CDS 40.0%
TGAATTGCGTCTCCTCATAT+TGG + Chr8:34688972-34688991 MsG0880044040.01.T01:CDS 40.0%
TGGATTTGAGGAAATTGGTG+CGG - Chr8:34688936-34688955 None:intergenic 40.0%
TTCACCATAGACGTTATACC+TGG - Chr8:34689453-34689472 None:intergenic 40.0%
TTGTCTCTCCTATCACAGTA+GGG + Chr8:34689745-34689764 MsG0880044040.01.T01:CDS 40.0%
TTTCCCAGGTATAACGTCTA+TGG + Chr8:34689446-34689465 MsG0880044040.01.T01:CDS 40.0%
TTTGGGAGATATATAGCCTG+AGG + Chr8:34689376-34689395 MsG0880044040.01.T01:CDS 40.0%
! AAGAAGATTTTGAGCTAGGC+TGG + Chr8:34689793-34689812 MsG0880044040.01.T01:CDS 40.0%
! AATGGAAAAAGGAGGAGCAT+CGG - Chr8:34689118-34689137 None:intergenic 40.0%
! AGGGAAGAAGATTTTGAGCT+AGG + Chr8:34689789-34689808 MsG0880044040.01.T01:CDS 40.0%
! CTGGTGAAAGGTTTGAGATT+AGG + Chr8:34689037-34689056 MsG0880044040.01.T01:CDS 40.0%
! GACGCCTGATTTTCATATCT+GGG + Chr8:34689653-34689672 MsG0880044040.01.T01:CDS 40.0%
! GCAAGTTGTATGGACCTTTT+TGG + Chr8:34689358-34689377 MsG0880044040.01.T01:CDS 40.0%
! GCATTGGCATCTTGTTGAAA+TGG - Chr8:34689084-34689103 None:intergenic 40.0%
!! ACTTGAATGGATTTTGCCAC+TGG + Chr8:34689472-34689491 MsG0880044040.01.T01:CDS 40.0%
!! GCACTTTTTGTCTCTACCAA+GGG + Chr8:34689172-34689191 MsG0880044040.01.T01:CDS 40.0%
!! GGACGAAACTTGTTTTCCAT+TGG - Chr8:34689261-34689280 None:intergenic 40.0%
!! TGGACCAAGATGTTTGTTGT+CGG + Chr8:34689705-34689724 MsG0880044040.01.T01:CDS 40.0%
AAGGGTCAACGACTGTGTTA+TGG + Chr8:34689190-34689209 MsG0880044040.01.T01:CDS 45.0%
AAGTGGGTGTCAAGGAATCA+TGG + Chr8:34689685-34689704 MsG0880044040.01.T01:CDS 45.0%
AAGTTTCGTCCTCATGGGTT+TGG + Chr8:34689270-34689289 MsG0880044040.01.T01:CDS 45.0%
ACCCTAACCGTTCCAATATG+AGG - Chr8:34688987-34689006 None:intergenic 45.0%
ATAACACAGTCGTTGACCCT+TGG - Chr8:34689191-34689210 None:intergenic 45.0%
ATAGCCTGAGGAGTGATTCT+TGG + Chr8:34689388-34689407 MsG0880044040.01.T01:CDS 45.0%
ATTCTTGGAGGAAACTCGAC+GGG + Chr8:34689403-34689422 MsG0880044040.01.T01:CDS 45.0%
CAAGAACCGGGTATTCTTCA+GGG + Chr8:34689770-34689789 MsG0880044040.01.T01:CDS 45.0%
CAGTCATAACCAAACCCATG+AGG - Chr8:34689282-34689301 None:intergenic 45.0%
CATGTCTATCGGTAAACCAG+TGG - Chr8:34689491-34689510 None:intergenic 45.0%
CTCCTCATATTGGAACGGTT+AGG + Chr8:34688982-34689001 MsG0880044040.01.T01:CDS 45.0%
CTTCTTCCCTGAAGAATACC+CGG - Chr8:34689779-34689798 None:intergenic 45.0%
GATTCTTGGAGGAAACTCGA+CGG + Chr8:34689402-34689421 MsG0880044040.01.T01:CDS 45.0%
TCCACCAAGCTATCAACCAA+TGG + Chr8:34689242-34689261 MsG0880044040.01.T01:CDS 45.0%
TCGGAAGCTTACATATCCCA+TGG + Chr8:34689326-34689345 MsG0880044040.01.T01:CDS 45.0%
TGCGTCTCCTCATATTGGAA+CGG + Chr8:34688977-34688996 MsG0880044040.01.T01:CDS 45.0%
TGTCTCGCTGCTAAAGTCAA+AGG - Chr8:34689529-34689548 None:intergenic 45.0%
TTCAGCGTCATCATCGTGTT+TGG - Chr8:34688956-34688975 None:intergenic 45.0%
TTCTTGCTCCCTACTGTGAT+AGG - Chr8:34689756-34689775 None:intergenic 45.0%
! GGACGCCTGATTTTCATATC+TGG + Chr8:34689652-34689671 MsG0880044040.01.T01:CDS 45.0%
!! GGACCAAGATGTTTGTTGTC+GGG + Chr8:34689706-34689725 MsG0880044040.01.T01:CDS 45.0%
!! GGCACTTTTTGTCTCTACCA+AGG + Chr8:34689171-34689190 MsG0880044040.01.T01:CDS 45.0%
!! TCCATTGGTTGATAGCTTGG+TGG - Chr8:34689246-34689265 None:intergenic 45.0%
!!! ATCTGGGTTTTGGGTGAAGT+GGG + Chr8:34689669-34689688 MsG0880044040.01.T01:CDS 45.0%
!!! TATCTGGGTTTTGGGTGAAG+TGG + Chr8:34689668-34689687 MsG0880044040.01.T01:CDS 45.0%
AGGCCCGACAACAAACATCT+TGG - Chr8:34689712-34689731 None:intergenic 50.0%
GCAAGAACCGGGTATTCTTC+AGG + Chr8:34689769-34689788 MsG0880044040.01.T01:CDS 50.0%
TCACAGTAGGGAGCAAGAAC+CGG + Chr8:34689757-34689776 MsG0880044040.01.T01:CDS 50.0%
TCCTCCAAGAATCACTCCTC+AGG - Chr8:34689395-34689414 None:intergenic 50.0%
TGAGGAAATTGGTGCGGAAC+AGG - Chr8:34688930-34688949 None:intergenic 50.0%
TTCTTGGAGGAAACTCGACG+GGG + Chr8:34689404-34689423 MsG0880044040.01.T01:CDS 50.0%
TTGGGCTCTGCCAGTGTTAA+TGG + Chr8:34689150-34689169 MsG0880044040.01.T01:CDS 50.0%
TTTGGGTGAAGTGGGTGTCA+AGG + Chr8:34689677-34689696 MsG0880044040.01.T01:CDS 50.0%
!! AAAAGGAGGAGCATCGGCAT+CGG - Chr8:34689112-34689131 None:intergenic 50.0%
CACAGTAGGGAGCAAGAACC+GGG + Chr8:34689758-34689777 MsG0880044040.01.T01:CDS 55.0%
GCCTGAGGAGTGATTCTTGG+AGG + Chr8:34689391-34689410 MsG0880044040.01.T01:CDS 55.0%
!! AGGAGCATCGGCATCGGCAT+CGG - Chr8:34689106-34689125 None:intergenic 60.0%
!! ATCGGCATCGGCATCGGCAT+TGG - Chr8:34689100-34689119 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 34688760 34689920 34688760 ID=MsG0880044040.01;Name=MsG0880044040.01
Chr8 mRNA 34688760 34689920 34688760 ID=MsG0880044040.01.T01;Parent=MsG0880044040.01;Name=MsG0880044040.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|386
Chr8 exon 34688760 34689920 34688760 ID=MsG0880044040.01.T01:exon:20554;Parent=MsG0880044040.01.T01
Chr8 CDS 34688760 34689920 34688760 ID=MsG0880044040.01.T01:cds;Parent=MsG0880044040.01.T01
Gene Sequence

>MsG0880044040.01.T01

ATGGCTGATCCTTCGAAGAATAAGAAGGTTAGTAGTTCTTCTGATTCTCACATACATGATGACATTGCTTTCTCCATTCTCTCCAAATTACCTCTCAAATCACTCAAACGTTTTACTTGTGCTAACAAATCATGGTCACTTCTTTTCCAAAACCCTAATTTCATGAACCTGTTCCGCACCAATTTCCTCAAATCCAAACACGATGATGACGCTGAATTGCGTCTCCTCATATTGGAACGGTTAGGGTTTCCCATCCAGCAATCTCTTTCCATTCTTTCTGGTGAAAGGTTTGAGATTAGGGCTAATTTAGATTGGCCACTTCCATTTCAACAAGATGCCAATGCCGATGCCGATGCCGATGCTCCTCCTTTTTCCATTCCTATTTTCATTTTGGGCTCTGCCAGTGTTAATGGCACTTTTTGTCTCTACCAAGGGTCAACGACTGTGTTATGGAACCTTGCAACCTCAGAATTAAAGATCATTCCACCAAGCTATCAACCAATGGAAAACAAGTTTCGTCCTCATGGGTTTGGTTATGACTGTGTTACAAATGATTTTAAGGTGATTCGGAAGCTTACATATCCCATGGAATTTGAAGGCAAGTTGTATGGACCTTTTTGGGAGATATATAGCCTGAGGAGTGATTCTTGGAGGAAACTCGACGGGGTTGATGATATACCTGATTATTTCCCAGGTATAACGTCTATGGTGAACTTGAATGGATTTTGCCACTGGTTTACCGATAGACATGATAATGATATAGTGTCCTTTGACTTTAGCAGCGAGACATTTGTTGCAACTACCTTACCTTCTTCAGATGTAACATATAGATCATACAATTTTAACTTGGTGGAGTTAAGTGAGTCTCTTTCTGTCATCTATAATTACGACAGGACGCCTGATTTTCATATCTGGGTTTTGGGTGAAGTGGGTGTCAAGGAATCATGGACCAAGATGTTTGTTGTCGGGCCTTATAATTGTTCGATTGTCTCTCCTATCACAGTAGGGAGCAAGAACCGGGTATTCTTCAGGGAAGAAGATTTTGAGCTAGGCTGGCTTAATTTAAGTACCCAAAGAGTTCAGGAAATTGAAGTTAATGGAGAGTTATTTCACATTGCAATTTTCAAGGAAAATCTGCTTCCTTTTCCTAGGAATGAATAA
Protein sequence

>MsG0880044040.01.T01

MADPSKNKKVSSSSDSHIHDDIAFSILSKLPLKSLKRFTCANKSWSLLFQNPNFMNLFRTNFLKSKHDDDAELRLLILERLGFPIQQSLSILSGERFEIRANLDWPLPFQQDANADADADAPPFSIPIFILGSASVNGTFCLYQGSTTVLWNLATSELKIIPPSYQPMENKFRPHGFGYDCVTNDFKVIRKLTYPMEFEGKLYGPFWEIYSLRSDSWRKLDGVDDIPDYFPGITSMVNLNGFCHWFTDRHDNDIVSFDFSSETFVATTLPSSDVTYRSYNFNLVELSESLSVIYNYDRTPDFHIWVLGEVGVKESWTKMFVVGPYNCSIVSPITVGSKNRVFFREEDFELGWLNLSTQRVQEIEVNGELFHIAIFKENLLPFPRNE*