Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043710.01.T01 | AET02355.2 | 89.595 | 346 | 31 | 1 | 1 | 341 | 1 | 346 | 0 | 634 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043710.01.T01 | Q9LU24 | 30.814 | 172 | 100 | 6 | 8 | 178 | 1 | 154 | 1.26E-14 | 77.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043710.01.T01 | G7LGR5 | 89.595 | 346 | 31 | 1 | 1 | 341 | 1 | 346 | 0.0 | 634 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043710.01.T01 | MTR_8g039500 | 89.595 | 346 | 31 | 1 | 1 | 341 | 1 | 346 | 0.0 | 634 |
MsG0880043710.01.T01 | MTR_2g066170 | 77.121 | 389 | 72 | 6 | 1 | 374 | 1 | 387 | 0.0 | 587 |
MsG0880043710.01.T01 | MTR_2g066200 | 74.872 | 390 | 81 | 6 | 1 | 374 | 1 | 389 | 0.0 | 567 |
MsG0880043710.01.T01 | MTR_2g066150 | 60.574 | 383 | 120 | 10 | 1 | 374 | 1 | 361 | 2.36e-146 | 419 |
MsG0880043710.01.T01 | MTR_2g065860 | 57.538 | 398 | 136 | 10 | 1 | 374 | 1 | 389 | 9.60e-144 | 413 |
MsG0880043710.01.T01 | MTR_2g065840 | 55.919 | 397 | 143 | 11 | 1 | 373 | 1 | 389 | 8.00e-131 | 380 |
MsG0880043710.01.T01 | MTR_1g050308 | 51.031 | 388 | 114 | 10 | 1 | 374 | 23 | 348 | 9.19e-114 | 335 |
MsG0880043710.01.T01 | MTR_3g011120 | 51.733 | 375 | 162 | 9 | 1 | 362 | 1 | 369 | 5.12e-112 | 332 |
MsG0880043710.01.T01 | MTR_8g063440 | 48.601 | 393 | 174 | 11 | 1 | 374 | 1 | 384 | 9.93e-111 | 329 |
MsG0880043710.01.T01 | MTR_8g464770 | 48.042 | 383 | 178 | 9 | 1 | 369 | 1 | 376 | 8.49e-106 | 316 |
MsG0880043710.01.T01 | MTR_2g038680 | 43.133 | 415 | 184 | 12 | 1 | 372 | 5 | 410 | 9.22e-98 | 296 |
MsG0880043710.01.T01 | MTR_8g467670 | 45.524 | 391 | 185 | 12 | 1 | 374 | 1 | 380 | 1.35e-97 | 296 |
MsG0880043710.01.T01 | MTR_8g064890 | 45.250 | 400 | 182 | 14 | 1 | 374 | 1 | 389 | 2.76e-97 | 295 |
MsG0880043710.01.T01 | MTR_8g012090 | 46.409 | 362 | 141 | 10 | 1 | 341 | 5 | 334 | 1.97e-96 | 291 |
MsG0880043710.01.T01 | MTR_5g024260 | 47.680 | 388 | 163 | 14 | 1 | 354 | 7 | 388 | 7.20e-94 | 287 |
MsG0880043710.01.T01 | MTR_0129s0120 | 44.836 | 397 | 181 | 13 | 4 | 372 | 9 | 395 | 8.41e-94 | 286 |
MsG0880043710.01.T01 | MTR_0129s0070 | 44.557 | 395 | 185 | 12 | 6 | 374 | 11 | 397 | 1.05e-93 | 286 |
MsG0880043710.01.T01 | MTR_1g050312 | 56.383 | 282 | 91 | 8 | 76 | 349 | 15 | 272 | 1.62e-92 | 279 |
MsG0880043710.01.T01 | MTR_2g022000 | 44.304 | 395 | 169 | 13 | 2 | 350 | 6 | 395 | 2.15e-92 | 284 |
MsG0880043710.01.T01 | MTR_0129s0050 | 43.750 | 416 | 173 | 15 | 4 | 372 | 6 | 407 | 2.24e-92 | 283 |
MsG0880043710.01.T01 | MTR_0831s0010 | 44.389 | 401 | 177 | 16 | 2 | 373 | 38 | 421 | 1.34e-91 | 281 |
MsG0880043710.01.T01 | MTR_5g097330 | 41.422 | 408 | 193 | 13 | 1 | 372 | 5 | 402 | 4.53e-91 | 279 |
MsG0880043710.01.T01 | MTR_2g021950 | 42.857 | 399 | 188 | 12 | 1 | 369 | 5 | 393 | 1.45e-90 | 278 |
MsG0880043710.01.T01 | MTR_2g021800 | 42.143 | 420 | 188 | 14 | 2 | 374 | 6 | 417 | 6.00e-88 | 272 |
MsG0880043710.01.T01 | MTR_4g102410 | 42.222 | 405 | 194 | 13 | 1 | 371 | 50 | 448 | 1.01e-87 | 272 |
MsG0880043710.01.T01 | MTR_2g034700 | 45.974 | 385 | 168 | 13 | 3 | 366 | 4 | 369 | 2.16e-87 | 269 |
MsG0880043710.01.T01 | MTR_0054s0090 | 42.336 | 411 | 189 | 12 | 2 | 374 | 7 | 407 | 1.79e-86 | 268 |
MsG0880043710.01.T01 | MTR_4g014370 | 43.062 | 418 | 182 | 18 | 1 | 372 | 1 | 408 | 2.48e-86 | 267 |
MsG0880043710.01.T01 | MTR_0054s0100 | 41.951 | 410 | 194 | 11 | 2 | 374 | 7 | 409 | 2.87e-86 | 267 |
MsG0880043710.01.T01 | MTR_7g017170 | 40.389 | 411 | 201 | 13 | 1 | 374 | 7 | 410 | 1.04e-85 | 266 |
MsG0880043710.01.T01 | MTR_1g007450 | 43.501 | 377 | 181 | 9 | 1 | 349 | 1 | 373 | 1.31e-85 | 266 |
MsG0880043710.01.T01 | MTR_4g117550 | 42.347 | 392 | 179 | 12 | 4 | 374 | 9 | 374 | 3.62e-85 | 263 |
MsG0880043710.01.T01 | MTR_7g017130 | 41.250 | 400 | 201 | 13 | 1 | 374 | 7 | 398 | 4.90e-85 | 263 |
MsG0880043710.01.T01 | MTR_5g096910 | 41.772 | 395 | 197 | 13 | 2 | 372 | 7 | 392 | 1.30e-84 | 262 |
MsG0880043710.01.T01 | MTR_5g059430 | 41.346 | 416 | 183 | 17 | 6 | 371 | 20 | 424 | 3.97e-83 | 259 |
MsG0880043710.01.T01 | MTR_6g080680 | 42.569 | 397 | 181 | 15 | 2 | 367 | 9 | 389 | 6.37e-83 | 258 |
MsG0880043710.01.T01 | MTR_6g079770 | 42.410 | 415 | 184 | 14 | 4 | 371 | 9 | 415 | 1.17e-82 | 258 |
MsG0880043710.01.T01 | MTR_6g086825 | 41.500 | 400 | 195 | 12 | 9 | 374 | 67 | 461 | 1.54e-82 | 259 |
MsG0880043710.01.T01 | MTR_5g069390 | 40.898 | 401 | 197 | 11 | 6 | 371 | 20 | 415 | 3.63e-82 | 259 |
MsG0880043710.01.T01 | MTR_4g028660 | 41.500 | 400 | 197 | 15 | 1 | 370 | 4 | 396 | 7.77e-82 | 255 |
MsG0880043710.01.T01 | MTR_4g027450 | 41.500 | 400 | 197 | 15 | 1 | 370 | 4 | 396 | 7.77e-82 | 255 |
MsG0880043710.01.T01 | MTR_5g097350 | 40.979 | 388 | 197 | 10 | 3 | 369 | 7 | 383 | 1.35e-81 | 254 |
MsG0880043710.01.T01 | MTR_4g028510 | 43.415 | 410 | 184 | 17 | 1 | 373 | 4 | 402 | 1.99e-81 | 256 |
MsG0880043710.01.T01 | MTR_4g028680 | 41.809 | 409 | 192 | 16 | 1 | 374 | 4 | 401 | 3.98e-81 | 254 |
MsG0880043710.01.T01 | MTR_4g055820 | 43.251 | 363 | 161 | 10 | 2 | 327 | 4 | 358 | 4.23e-81 | 252 |
MsG0880043710.01.T01 | MTR_1g053510 | 43.276 | 409 | 179 | 14 | 2 | 368 | 4 | 401 | 7.15e-81 | 253 |
MsG0880043710.01.T01 | MTR_8g063330 | 44.751 | 362 | 151 | 16 | 1 | 327 | 1 | 348 | 1.11e-80 | 255 |
MsG0880043710.01.T01 | MTR_2g104340 | 39.803 | 407 | 194 | 13 | 4 | 374 | 6 | 397 | 7.43e-80 | 250 |
MsG0880043710.01.T01 | MTR_8g033140 | 38.837 | 430 | 190 | 12 | 2 | 374 | 6 | 419 | 1.23e-79 | 250 |
MsG0880043710.01.T01 | MTR_2g021770 | 40.191 | 418 | 196 | 13 | 1 | 374 | 1 | 408 | 2.02e-79 | 249 |
MsG0880043710.01.T01 | MTR_7g069550 | 40.704 | 398 | 184 | 15 | 6 | 365 | 8 | 391 | 2.04e-79 | 249 |
MsG0880043710.01.T01 | MTR_5g096630 | 40.244 | 410 | 204 | 12 | 1 | 372 | 7 | 413 | 2.43e-79 | 249 |
MsG0880043710.01.T01 | MTR_8g064790 | 41.538 | 390 | 160 | 11 | 1 | 374 | 1 | 338 | 2.52e-79 | 247 |
MsG0880043710.01.T01 | MTR_4g028750 | 41.207 | 381 | 173 | 14 | 1 | 344 | 4 | 370 | 5.42e-78 | 246 |
MsG0880043710.01.T01 | MTR_0134s0060 | 38.480 | 421 | 204 | 13 | 1 | 374 | 1 | 413 | 1.40e-77 | 245 |
MsG0880043710.01.T01 | MTR_7g017040 | 39.798 | 397 | 204 | 11 | 5 | 373 | 9 | 398 | 1.74e-77 | 244 |
MsG0880043710.01.T01 | MTR_8g046310 | 42.092 | 392 | 181 | 17 | 2 | 368 | 3 | 373 | 3.22e-77 | 243 |
MsG0880043710.01.T01 | MTR_8g041270 | 39.762 | 420 | 194 | 15 | 1 | 374 | 1 | 407 | 6.39e-77 | 243 |
MsG0880043710.01.T01 | MTR_5g037680 | 40.842 | 404 | 170 | 19 | 7 | 367 | 3 | 380 | 1.03e-76 | 244 |
MsG0880043710.01.T01 | MTR_8g036970 | 43.305 | 351 | 139 | 9 | 16 | 353 | 2 | 305 | 1.27e-76 | 241 |
MsG0880043710.01.T01 | MTR_8g032980 | 40.233 | 430 | 189 | 16 | 2 | 374 | 4 | 422 | 1.81e-76 | 242 |
MsG0880043710.01.T01 | MTR_6g079810 | 41.463 | 410 | 189 | 15 | 4 | 371 | 61 | 461 | 1.93e-76 | 243 |
MsG0880043710.01.T01 | MTR_6g090180 | 39.951 | 408 | 197 | 13 | 2 | 370 | 37 | 435 | 1.73e-75 | 240 |
MsG0880043710.01.T01 | MTR_1g007410 | 41.500 | 400 | 187 | 14 | 1 | 365 | 11 | 398 | 1.84e-75 | 239 |
MsG0880043710.01.T01 | MTR_6g461660 | 41.519 | 395 | 193 | 13 | 4 | 369 | 11 | 396 | 4.10e-75 | 238 |
MsG0880043710.01.T01 | MTR_1g098180 | 39.850 | 399 | 169 | 15 | 1 | 367 | 1 | 360 | 4.11e-75 | 237 |
MsG0880043710.01.T01 | MTR_5g097220 | 41.523 | 407 | 190 | 15 | 7 | 372 | 8 | 407 | 1.06e-74 | 237 |
MsG0880043710.01.T01 | MTR_4g007940 | 44.476 | 353 | 142 | 17 | 62 | 374 | 4 | 342 | 3.71e-73 | 231 |
MsG0880043710.01.T01 | MTR_4g130330 | 39.747 | 395 | 201 | 13 | 9 | 373 | 4 | 391 | 1.80e-72 | 231 |
MsG0880043710.01.T01 | MTR_5g043605 | 39.785 | 372 | 155 | 11 | 8 | 368 | 21 | 334 | 6.20e-72 | 229 |
MsG0880043710.01.T01 | MTR_8g046200 | 40.326 | 429 | 182 | 16 | 2 | 369 | 3 | 418 | 1.31e-71 | 230 |
MsG0880043710.01.T01 | MTR_7g079640 | 39.276 | 359 | 181 | 11 | 11 | 349 | 12 | 353 | 1.12e-70 | 226 |
MsG0880043710.01.T01 | MTR_7g111700 | 38.806 | 402 | 163 | 15 | 9 | 374 | 12 | 366 | 3.66e-70 | 224 |
MsG0880043710.01.T01 | MTR_8g013000 | 40.223 | 358 | 171 | 12 | 6 | 329 | 4 | 352 | 2.71e-68 | 221 |
MsG0880043710.01.T01 | MTR_2g104280 | 38.293 | 410 | 195 | 15 | 7 | 372 | 9 | 404 | 1.04e-67 | 219 |
MsG0880043710.01.T01 | MTR_8g046220 | 38.534 | 423 | 182 | 14 | 2 | 369 | 3 | 402 | 3.03e-67 | 218 |
MsG0880043710.01.T01 | MTR_5g072060 | 38.776 | 392 | 169 | 14 | 10 | 359 | 4 | 366 | 4.55e-67 | 223 |
MsG0880043710.01.T01 | MTR_6g478230 | 38.272 | 405 | 191 | 14 | 9 | 374 | 24 | 408 | 1.33e-66 | 217 |
MsG0880043710.01.T01 | MTR_5g097680 | 37.647 | 425 | 200 | 17 | 5 | 372 | 10 | 426 | 1.81e-66 | 216 |
MsG0880043710.01.T01 | MTR_8g063370 | 38.776 | 392 | 199 | 14 | 2 | 364 | 4 | 383 | 2.93e-66 | 215 |
MsG0880043710.01.T01 | MTR_8g063310 | 34.860 | 393 | 208 | 15 | 4 | 365 | 14 | 389 | 1.66e-64 | 211 |
MsG0880043710.01.T01 | MTR_2g064950 | 37.626 | 396 | 191 | 17 | 6 | 364 | 4 | 380 | 5.58e-63 | 207 |
MsG0880043710.01.T01 | MTR_1g007430 | 42.308 | 338 | 143 | 12 | 23 | 329 | 7 | 323 | 1.15e-62 | 204 |
MsG0880043710.01.T01 | MTR_8g033110 | 35.280 | 428 | 207 | 16 | 1 | 372 | 1 | 414 | 1.30e-62 | 206 |
MsG0880043710.01.T01 | MTR_5g092850 | 37.313 | 402 | 193 | 16 | 11 | 370 | 15 | 399 | 1.46e-62 | 206 |
MsG0880043710.01.T01 | MTR_8g018110 | 35.294 | 408 | 213 | 11 | 2 | 372 | 3 | 396 | 5.72e-62 | 204 |
MsG0880043710.01.T01 | MTR_5g091140 | 37.726 | 387 | 188 | 14 | 1 | 356 | 37 | 401 | 7.47e-61 | 202 |
MsG0880043710.01.T01 | MTR_6g090250 | 36.869 | 396 | 188 | 15 | 32 | 370 | 31 | 421 | 2.28e-60 | 201 |
MsG0880043710.01.T01 | MTR_4g014370 | 38.817 | 389 | 157 | 15 | 1 | 372 | 12 | 336 | 5.39e-60 | 197 |
MsG0880043710.01.T01 | MTR_7g016930 | 39.628 | 323 | 144 | 10 | 5 | 303 | 9 | 304 | 9.77e-60 | 196 |
MsG0880043710.01.T01 | MTR_8g033090 | 34.977 | 426 | 208 | 16 | 1 | 372 | 1 | 411 | 4.96e-58 | 194 |
MsG0880043710.01.T01 | MTR_5g074800 | 37.931 | 348 | 171 | 15 | 51 | 365 | 1 | 336 | 8.64e-58 | 191 |
MsG0880043710.01.T01 | MTR_6g078010 | 38.968 | 349 | 165 | 14 | 49 | 368 | 1 | 330 | 7.77e-56 | 187 |
MsG0880043710.01.T01 | MTR_5g068490 | 42.857 | 294 | 140 | 11 | 86 | 374 | 8 | 278 | 4.70e-54 | 180 |
MsG0880043710.01.T01 | MTR_5g092860 | 37.883 | 359 | 156 | 15 | 31 | 350 | 21 | 351 | 9.19e-54 | 182 |
MsG0880043710.01.T01 | MTR_5g096900 | 39.939 | 328 | 139 | 16 | 1 | 289 | 1 | 309 | 1.20e-53 | 180 |
MsG0880043710.01.T01 | MTR_8g063350 | 34.465 | 383 | 181 | 13 | 3 | 365 | 5 | 337 | 1.37e-53 | 181 |
MsG0880043710.01.T01 | MTR_5g022850 | 34.750 | 400 | 185 | 14 | 1 | 374 | 5 | 354 | 4.20e-52 | 177 |
MsG0880043710.01.T01 | MTR_8g033000 | 36.898 | 374 | 176 | 16 | 49 | 373 | 1 | 363 | 1.27e-51 | 176 |
MsG0880043710.01.T01 | MTR_5g074850 | 36.896 | 393 | 193 | 17 | 2 | 352 | 25 | 404 | 4.74e-51 | 183 |
MsG0880043710.01.T01 | MTR_7g104710 | 38.816 | 304 | 133 | 10 | 4 | 286 | 9 | 280 | 4.69e-50 | 171 |
MsG0880043710.01.T01 | MTR_5g097820 | 39.544 | 263 | 130 | 9 | 5 | 245 | 14 | 269 | 8.78e-50 | 168 |
MsG0880043710.01.T01 | MTR_2g021920 | 42.194 | 237 | 109 | 7 | 157 | 369 | 37 | 269 | 5.71e-49 | 166 |
MsG0880043710.01.T01 | MTR_7g023800 | 35.465 | 344 | 154 | 12 | 51 | 366 | 1 | 304 | 4.06e-47 | 162 |
MsG0880043710.01.T01 | MTR_1g076810 | 42.857 | 238 | 112 | 9 | 4 | 223 | 10 | 241 | 5.13e-47 | 170 |
MsG0880043710.01.T01 | MTR_5g075370 | 36.364 | 396 | 189 | 20 | 3 | 352 | 2 | 380 | 1.41e-46 | 170 |
MsG0880043710.01.T01 | MTR_5g086590 | 44.118 | 238 | 108 | 11 | 128 | 354 | 15 | 238 | 1.60e-45 | 156 |
MsG0880043710.01.T01 | MTR_5g023970 | 44.737 | 190 | 100 | 3 | 189 | 374 | 9 | 197 | 1.92e-43 | 149 |
MsG0880043710.01.T01 | MTR_5g094350 | 37.153 | 288 | 122 | 10 | 8 | 259 | 9 | 273 | 1.75e-42 | 150 |
MsG0880043710.01.T01 | MTR_5g037190 | 36.680 | 259 | 137 | 7 | 1 | 246 | 5 | 249 | 2.54e-42 | 148 |
MsG0880043710.01.T01 | MTR_6g087620 | 34.967 | 306 | 153 | 8 | 77 | 363 | 1 | 279 | 5.54e-42 | 148 |
MsG0880043710.01.T01 | MTR_5g064700 | 34.118 | 340 | 173 | 16 | 77 | 372 | 35 | 367 | 7.19e-42 | 150 |
MsG0880043710.01.T01 | MTR_6g004450 | 40.336 | 238 | 114 | 9 | 151 | 372 | 43 | 268 | 1.72e-41 | 147 |
MsG0880043710.01.T01 | MTR_6g070880 | 40.756 | 238 | 109 | 9 | 1 | 208 | 21 | 256 | 2.10e-41 | 146 |
MsG0880043710.01.T01 | MTR_6g071420 | 40.756 | 238 | 109 | 9 | 1 | 208 | 21 | 256 | 2.10e-41 | 146 |
MsG0880043710.01.T01 | MTR_8g073570 | 46.821 | 173 | 80 | 5 | 4 | 168 | 2 | 170 | 1.04e-40 | 142 |
MsG0880043710.01.T01 | MTR_6g079790 | 33.544 | 316 | 173 | 10 | 89 | 374 | 2 | 310 | 2.07e-40 | 145 |
MsG0880043710.01.T01 | MTR_5g076490 | 34.890 | 364 | 170 | 14 | 49 | 373 | 1 | 336 | 5.28e-40 | 145 |
MsG0880043710.01.T01 | MTR_3g018750 | 40.574 | 244 | 113 | 10 | 156 | 372 | 2 | 240 | 9.51e-40 | 141 |
MsG0880043710.01.T01 | MTR_4g016000 | 45.370 | 216 | 67 | 12 | 131 | 322 | 2 | 190 | 1.32e-39 | 140 |
MsG0880043710.01.T01 | MTR_6g465360 | 40.000 | 195 | 97 | 4 | 1 | 176 | 51 | 244 | 7.05e-39 | 140 |
MsG0880043710.01.T01 | MTR_6g090260 | 43.077 | 195 | 94 | 7 | 188 | 370 | 72 | 261 | 8.91e-38 | 137 |
MsG0880043710.01.T01 | MTR_6g090260 | 53.226 | 62 | 28 | 1 | 1 | 61 | 8 | 69 | 4.82e-12 | 65.9 |
MsG0880043710.01.T01 | MTR_5g097850 | 35.616 | 292 | 117 | 11 | 98 | 372 | 7 | 244 | 1.83e-37 | 135 |
MsG0880043710.01.T01 | MTR_6g009350 | 41.919 | 198 | 98 | 7 | 151 | 335 | 2 | 195 | 6.80e-37 | 132 |
MsG0880043710.01.T01 | MTR_1g115205 | 35.458 | 251 | 106 | 9 | 4 | 233 | 25 | 240 | 1.31e-35 | 131 |
MsG0880043710.01.T01 | MTR_3g047580 | 46.528 | 144 | 56 | 3 | 1 | 140 | 1 | 127 | 1.40e-35 | 127 |
MsG0880043710.01.T01 | MTR_2g104260 | 34.050 | 279 | 144 | 9 | 6 | 253 | 8 | 277 | 2.42e-34 | 128 |
MsG0880043710.01.T01 | MTR_7g019250 | 43.868 | 212 | 82 | 9 | 155 | 349 | 222 | 413 | 1.03e-33 | 130 |
MsG0880043710.01.T01 | MTR_5g098950 | 40.930 | 215 | 83 | 8 | 128 | 329 | 90 | 273 | 7.09e-32 | 121 |
MsG0880043710.01.T01 | MTR_3g019290 | 38.679 | 212 | 81 | 9 | 1 | 197 | 1 | 178 | 1.57e-31 | 118 |
MsG0880043710.01.T01 | MTR_1g047080 | 30.746 | 335 | 172 | 12 | 49 | 374 | 1 | 284 | 7.86e-28 | 111 |
MsG0880043710.01.T01 | MTR_5g096070 | 41.104 | 163 | 70 | 4 | 6 | 165 | 20 | 159 | 1.77e-26 | 103 |
MsG0880043710.01.T01 | MTR_7g017150 | 39.896 | 193 | 101 | 7 | 191 | 374 | 82 | 268 | 3.25e-26 | 106 |
MsG0880043710.01.T01 | MTR_5g097650 | 40.602 | 133 | 75 | 2 | 9 | 141 | 19 | 147 | 4.36e-26 | 102 |
MsG0880043710.01.T01 | MTR_7g017120 | 39.896 | 193 | 101 | 7 | 191 | 374 | 81 | 267 | 4.68e-26 | 105 |
MsG0880043710.01.T01 | MTR_3g030620 | 39.264 | 163 | 85 | 5 | 220 | 371 | 21 | 180 | 2.22e-25 | 101 |
MsG0880043710.01.T01 | MTR_7g101200 | 37.619 | 210 | 102 | 9 | 128 | 329 | 40 | 228 | 3.40e-24 | 100 |
MsG0880043710.01.T01 | MTR_1g097560 | 27.346 | 373 | 228 | 14 | 4 | 358 | 28 | 375 | 6.23e-24 | 102 |
MsG0880043710.01.T01 | MTR_1g050305 | 65.060 | 83 | 22 | 2 | 275 | 350 | 21 | 103 | 5.24e-23 | 94.0 |
MsG0880043710.01.T01 | MTR_8g035690 | 34.722 | 288 | 126 | 14 | 132 | 372 | 30 | 302 | 1.09e-22 | 97.4 |
MsG0880043710.01.T01 | MTR_5g097540 | 41.667 | 144 | 71 | 6 | 191 | 329 | 97 | 232 | 7.83e-22 | 94.7 |
MsG0880043710.01.T01 | MTR_6g079730 | 44.056 | 143 | 64 | 7 | 236 | 368 | 9 | 145 | 3.61e-21 | 89.4 |
MsG0880043710.01.T01 | MTR_5g066420 | 39.310 | 145 | 65 | 6 | 222 | 350 | 1 | 138 | 6.39e-21 | 88.6 |
MsG0880043710.01.T01 | MTR_5g096920 | 36.943 | 157 | 85 | 7 | 222 | 371 | 1 | 150 | 6.77e-21 | 88.6 |
MsG0880043710.01.T01 | MTR_4g055060 | 27.922 | 308 | 202 | 10 | 12 | 311 | 30 | 325 | 3.73e-20 | 91.3 |
MsG0880043710.01.T01 | MTR_2g021155 | 25.455 | 330 | 232 | 9 | 15 | 344 | 39 | 354 | 4.16e-20 | 92.8 |
MsG0880043710.01.T01 | MTR_1g068835 | 27.922 | 308 | 192 | 12 | 12 | 308 | 4 | 292 | 4.68e-20 | 90.9 |
MsG0880043710.01.T01 | MTR_5g091150 | 36.898 | 187 | 83 | 8 | 107 | 290 | 40 | 194 | 5.05e-20 | 87.4 |
MsG0880043710.01.T01 | MTR_2g028160 | 26.606 | 327 | 199 | 11 | 8 | 305 | 1 | 315 | 7.73e-20 | 90.9 |
MsG0880043710.01.T01 | MTR_3g036290 | 27.879 | 330 | 198 | 14 | 12 | 334 | 22 | 318 | 9.24e-20 | 89.7 |
MsG0880043710.01.T01 | MTR_3g014540 | 25.294 | 340 | 229 | 11 | 12 | 344 | 29 | 350 | 2.21e-19 | 89.0 |
MsG0880043710.01.T01 | MTR_2g031720 | 27.419 | 310 | 195 | 12 | 12 | 307 | 6 | 299 | 3.86e-19 | 88.6 |
MsG0880043710.01.T01 | MTR_2g022020 | 40.351 | 114 | 63 | 2 | 258 | 369 | 6 | 116 | 4.14e-19 | 82.4 |
MsG0880043710.01.T01 | MTR_5g057710 | 26.129 | 310 | 196 | 11 | 12 | 310 | 46 | 333 | 9.71e-19 | 87.4 |
MsG0880043710.01.T01 | MTR_2g426060 | 27.134 | 328 | 194 | 14 | 8 | 307 | 2 | 312 | 1.27e-18 | 87.0 |
MsG0880043710.01.T01 | MTR_1g094210 | 27.759 | 299 | 186 | 12 | 12 | 305 | 57 | 330 | 2.00e-18 | 86.7 |
MsG0880043710.01.T01 | MTR_2g028130 | 27.246 | 334 | 209 | 13 | 8 | 317 | 1 | 324 | 2.21e-18 | 86.3 |
MsG0880043710.01.T01 | MTR_4g021785 | 25.199 | 377 | 232 | 14 | 11 | 371 | 8 | 350 | 2.23e-18 | 85.9 |
MsG0880043710.01.T01 | MTR_1g094210 | 28.094 | 299 | 185 | 12 | 12 | 305 | 57 | 330 | 2.58e-18 | 86.3 |
MsG0880043710.01.T01 | MTR_0667s0010 | 25.397 | 315 | 206 | 10 | 8 | 305 | 2 | 304 | 3.47e-18 | 85.9 |
MsG0880043710.01.T01 | MTR_8g041440 | 46.154 | 91 | 38 | 1 | 4 | 94 | 7 | 86 | 4.01e-18 | 79.7 |
MsG0880043710.01.T01 | MTR_5g097660 | 46.296 | 108 | 48 | 5 | 269 | 370 | 14 | 117 | 6.36e-18 | 79.3 |
MsG0880043710.01.T01 | MTR_1g097490 | 28.065 | 310 | 196 | 10 | 2 | 305 | 39 | 327 | 7.11e-18 | 84.7 |
MsG0880043710.01.T01 | MTR_5g036250 | 54.878 | 82 | 33 | 2 | 284 | 365 | 26 | 103 | 1.13e-17 | 80.5 |
MsG0880043710.01.T01 | MTR_7g070440 | 26.154 | 325 | 187 | 12 | 12 | 308 | 7 | 306 | 1.20e-17 | 84.0 |
MsG0880043710.01.T01 | MTR_2g425980 | 28.399 | 331 | 187 | 16 | 8 | 307 | 1 | 312 | 1.59e-17 | 84.0 |
MsG0880043710.01.T01 | MTR_2g426070 | 25.936 | 374 | 213 | 15 | 13 | 345 | 7 | 357 | 2.03e-17 | 83.6 |
MsG0880043710.01.T01 | MTR_2g426020 | 26.480 | 321 | 200 | 13 | 8 | 307 | 2 | 307 | 2.34e-17 | 83.2 |
MsG0880043710.01.T01 | MTR_2g025420 | 26.807 | 332 | 196 | 12 | 8 | 305 | 2 | 320 | 2.62e-17 | 83.2 |
MsG0880043710.01.T01 | MTR_2g426090 | 26.111 | 360 | 223 | 14 | 15 | 345 | 9 | 354 | 4.50e-17 | 82.4 |
MsG0880043710.01.T01 | MTR_2g046900 | 27.019 | 359 | 212 | 15 | 12 | 338 | 28 | 368 | 4.55e-17 | 82.4 |
MsG0880043710.01.T01 | MTR_3g013770 | 25.434 | 346 | 223 | 12 | 5 | 334 | 22 | 348 | 1.37e-16 | 80.9 |
MsG0880043710.01.T01 | MTR_4g023070 | 25.081 | 307 | 210 | 9 | 12 | 313 | 3 | 294 | 2.56e-16 | 80.1 |
MsG0880043710.01.T01 | MTR_5g057790 | 26.198 | 313 | 192 | 13 | 12 | 310 | 46 | 333 | 3.43e-16 | 79.7 |
MsG0880043710.01.T01 | MTR_3g009310 | 25.532 | 329 | 219 | 12 | 12 | 334 | 42 | 350 | 3.63e-16 | 79.7 |
MsG0880043710.01.T01 | MTR_4g023120 | 24.579 | 297 | 205 | 8 | 12 | 303 | 3 | 285 | 3.64e-16 | 79.3 |
MsG0880043710.01.T01 | MTR_3g083010 | 26.586 | 331 | 193 | 13 | 12 | 307 | 6 | 321 | 4.10e-16 | 79.7 |
MsG0880043710.01.T01 | MTR_3g014570 | 26.032 | 315 | 188 | 12 | 12 | 308 | 29 | 316 | 4.29e-16 | 79.3 |
MsG0880043710.01.T01 | MTR_2g028110 | 27.119 | 354 | 218 | 14 | 12 | 345 | 4 | 337 | 5.07e-16 | 79.3 |
MsG0880043710.01.T01 | MTR_2g029990 | 24.756 | 307 | 215 | 9 | 13 | 315 | 52 | 346 | 5.11e-16 | 79.3 |
MsG0880043710.01.T01 | MTR_1g050542 | 27.011 | 348 | 216 | 13 | 12 | 345 | 58 | 381 | 5.63e-16 | 79.3 |
MsG0880043710.01.T01 | MTR_4g023080 | 23.936 | 376 | 247 | 13 | 6 | 371 | 3 | 349 | 1.15e-15 | 77.8 |
MsG0880043710.01.T01 | MTR_2g031640 | 26.706 | 337 | 199 | 15 | 12 | 323 | 6 | 319 | 1.23e-15 | 78.2 |
MsG0880043710.01.T01 | MTR_5g022420 | 26.756 | 299 | 191 | 12 | 12 | 307 | 27 | 300 | 1.64e-15 | 77.8 |
MsG0880043710.01.T01 | MTR_3g006570 | 24.272 | 309 | 203 | 11 | 12 | 310 | 21 | 308 | 2.91e-15 | 77.0 |
MsG0880043710.01.T01 | MTR_0115s0020 | 25.664 | 339 | 204 | 16 | 11 | 315 | 9 | 333 | 3.35e-15 | 76.6 |
MsG0880043710.01.T01 | MTR_5g057690 | 24.834 | 302 | 200 | 8 | 12 | 310 | 46 | 323 | 5.30e-15 | 76.3 |
MsG0880043710.01.T01 | MTR_4g116330 | 26.453 | 344 | 219 | 14 | 6 | 337 | 17 | 338 | 7.42e-15 | 75.5 |
MsG0880043710.01.T01 | MTR_1g097330 | 28.846 | 312 | 172 | 16 | 12 | 305 | 16 | 295 | 1.15e-14 | 75.5 |
MsG0880043710.01.T01 | MTR_3g007270 | 27.143 | 350 | 215 | 15 | 12 | 342 | 47 | 375 | 1.25e-14 | 75.1 |
MsG0880043710.01.T01 | MTR_4g061340 | 27.044 | 318 | 202 | 13 | 12 | 317 | 26 | 325 | 1.73e-14 | 74.7 |
MsG0880043710.01.T01 | MTR_2g021150 | 27.362 | 307 | 196 | 12 | 12 | 307 | 14 | 304 | 1.75e-14 | 74.3 |
MsG0880043710.01.T01 | MTR_3g007410 | 26.710 | 307 | 190 | 15 | 15 | 308 | 55 | 339 | 2.32e-14 | 74.3 |
MsG0880043710.01.T01 | MTR_3g013740 | 26.168 | 321 | 200 | 12 | 7 | 307 | 39 | 342 | 2.54e-14 | 74.3 |
MsG0880043710.01.T01 | MTR_2g055970 | 28.165 | 316 | 187 | 16 | 4 | 304 | 203 | 493 | 2.65e-14 | 74.7 |
MsG0880043710.01.T01 | MTR_1g054575 | 26.349 | 315 | 194 | 13 | 1 | 304 | 41 | 328 | 4.89e-14 | 73.9 |
MsG0880043710.01.T01 | MTR_3g009260 | 24.024 | 333 | 206 | 15 | 15 | 334 | 44 | 342 | 4.98e-14 | 73.2 |
MsG0880043710.01.T01 | MTR_5g057020 | 24.510 | 306 | 191 | 9 | 12 | 310 | 46 | 318 | 5.78e-14 | 72.8 |
MsG0880043710.01.T01 | MTR_5g070080 | 27.812 | 320 | 187 | 15 | 11 | 303 | 9 | 311 | 8.99e-14 | 72.4 |
MsG0880043710.01.T01 | MTR_3g036335 | 22.697 | 304 | 215 | 7 | 12 | 310 | 41 | 329 | 1.29e-13 | 72.0 |
MsG0880043710.01.T01 | MTR_2g024100 | 25.625 | 320 | 197 | 13 | 26 | 318 | 21 | 326 | 1.70e-13 | 71.6 |
MsG0880043710.01.T01 | MTR_0064s0160 | 26.536 | 358 | 213 | 18 | 11 | 333 | 41 | 383 | 2.32e-13 | 71.6 |
MsG0880043710.01.T01 | MTR_3g030240 | 25.237 | 317 | 176 | 14 | 12 | 311 | 40 | 312 | 2.33e-13 | 71.2 |
MsG0880043710.01.T01 | MTR_6g053260 | 27.900 | 319 | 198 | 16 | 2 | 307 | 325 | 624 | 2.87e-13 | 71.6 |
MsG0880043710.01.T01 | MTR_3g030350 | 23.494 | 332 | 213 | 13 | 12 | 331 | 35 | 337 | 3.56e-13 | 70.5 |
MsG0880043710.01.T01 | MTR_4g023090 | 25.740 | 338 | 215 | 13 | 6 | 328 | 10 | 326 | 3.71e-13 | 70.5 |
MsG0880043710.01.T01 | MTR_4g030830 | 24.233 | 326 | 199 | 12 | 12 | 307 | 9 | 316 | 4.11e-13 | 70.5 |
MsG0880043710.01.T01 | MTR_5g086780 | 65.306 | 49 | 17 | 0 | 4 | 52 | 8 | 56 | 4.20e-13 | 68.6 |
MsG0880043710.01.T01 | MTR_5g086780 | 40.426 | 94 | 50 | 2 | 259 | 348 | 137 | 228 | 9.15e-12 | 64.7 |
MsG0880043710.01.T01 | MTR_2g046830 | 26.433 | 314 | 200 | 13 | 2 | 304 | 12 | 305 | 4.52e-13 | 70.5 |
MsG0880043710.01.T01 | MTR_3g036430 | 24.214 | 318 | 191 | 12 | 1 | 310 | 1 | 276 | 4.60e-13 | 70.1 |
MsG0880043710.01.T01 | MTR_3g436150 | 26.984 | 315 | 198 | 12 | 12 | 308 | 32 | 332 | 5.35e-13 | 70.1 |
MsG0880043710.01.T01 | MTR_3g010870 | 25.656 | 343 | 211 | 17 | 12 | 342 | 37 | 347 | 5.83e-13 | 70.1 |
MsG0880043710.01.T01 | MTR_3g010390 | 24.468 | 376 | 244 | 15 | 12 | 357 | 33 | 398 | 6.03e-13 | 70.1 |
MsG0880043710.01.T01 | MTR_3g007330 | 24.759 | 311 | 206 | 11 | 12 | 316 | 48 | 336 | 6.19e-13 | 70.1 |
MsG0880043710.01.T01 | MTR_7g028660 | 23.760 | 383 | 233 | 14 | 12 | 358 | 11 | 370 | 8.21e-13 | 69.3 |
MsG0880043710.01.T01 | MTR_3g011100 | 25.723 | 311 | 202 | 13 | 12 | 310 | 235 | 528 | 1.43e-12 | 69.3 |
MsG0880043710.01.T01 | MTR_4g023440 | 26.991 | 226 | 136 | 9 | 11 | 228 | 17 | 221 | 2.16e-12 | 67.8 |
MsG0880043710.01.T01 | MTR_5g070130 | 26.398 | 322 | 192 | 13 | 4 | 303 | 3 | 301 | 2.75e-12 | 67.8 |
MsG0880043710.01.T01 | MTR_4g030090 | 24.633 | 341 | 209 | 13 | 6 | 317 | 8 | 329 | 2.81e-12 | 67.8 |
MsG0880043710.01.T01 | MTR_4g116330 | 27.074 | 229 | 144 | 8 | 6 | 228 | 17 | 228 | 4.50e-12 | 67.0 |
MsG0880043710.01.T01 | MTR_2g078850 | 24.847 | 326 | 173 | 13 | 15 | 310 | 33 | 316 | 4.64e-12 | 67.0 |
MsG0880043710.01.T01 | MTR_2g048580 | 24.308 | 325 | 182 | 12 | 6 | 309 | 2 | 283 | 5.59e-12 | 66.6 |
MsG0880043710.01.T01 | MTR_4g117750 | 27.500 | 320 | 168 | 14 | 12 | 303 | 3 | 286 | 7.07e-12 | 67.0 |
MsG0880043710.01.T01 | MTR_4g117770 | 27.897 | 233 | 125 | 9 | 11 | 228 | 10 | 214 | 9.06e-12 | 66.2 |
MsG0880043710.01.T01 | MTR_4g117810 | 27.897 | 233 | 125 | 9 | 11 | 228 | 10 | 214 | 9.06e-12 | 66.2 |
MsG0880043710.01.T01 | MTR_4g109280 | 25.836 | 329 | 205 | 13 | 10 | 325 | 6 | 308 | 9.83e-12 | 66.2 |
MsG0880043710.01.T01 | MTR_3g007430 | 25.407 | 307 | 191 | 10 | 15 | 307 | 46 | 328 | 1.06e-11 | 66.2 |
MsG0880043710.01.T01 | MTR_5g048160 | 24.324 | 407 | 247 | 17 | 11 | 373 | 3 | 392 | 1.30e-11 | 65.9 |
MsG0880043710.01.T01 | MTR_2g031680 | 24.606 | 317 | 196 | 14 | 8 | 307 | 2 | 292 | 2.08e-11 | 65.1 |
MsG0880043710.01.T01 | MTR_3g058440 | 27.530 | 247 | 151 | 12 | 12 | 246 | 35 | 265 | 3.23e-11 | 63.9 |
MsG0880043710.01.T01 | MTR_2g031700 | 25.692 | 253 | 157 | 9 | 8 | 250 | 2 | 233 | 3.88e-11 | 63.5 |
MsG0880043710.01.T01 | MTR_3g010430 | 22.013 | 318 | 201 | 11 | 12 | 310 | 36 | 325 | 4.39e-11 | 64.3 |
MsG0880043710.01.T01 | MTR_4g118370 | 29.524 | 210 | 110 | 11 | 125 | 325 | 30 | 210 | 4.45e-11 | 63.2 |
MsG0880043710.01.T01 | MTR_5g046300 | 24.351 | 308 | 203 | 13 | 12 | 312 | 4 | 288 | 4.74e-11 | 63.9 |
MsG0880043710.01.T01 | MTR_5g046290 | 24.351 | 308 | 203 | 13 | 12 | 312 | 4 | 288 | 4.74e-11 | 63.9 |
MsG0880043710.01.T01 | MTR_2g078900 | 22.591 | 301 | 208 | 9 | 12 | 307 | 33 | 313 | 4.94e-11 | 63.9 |
MsG0880043710.01.T01 | MTR_6g048140 | 24.290 | 317 | 191 | 13 | 12 | 307 | 39 | 327 | 6.96e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043710.01.T01 | AT3G06240 | 26.042 | 384 | 218 | 16 | 12 | 349 | 36 | 399 | 9.94e-20 | 90.5 |
MsG0880043710.01.T01 | AT3G16210 | 30.814 | 172 | 100 | 6 | 8 | 178 | 1 | 154 | 1.29e-15 | 77.8 |
MsG0880043710.01.T01 | AT4G12560 | 22.841 | 359 | 245 | 12 | 12 | 349 | 4 | 351 | 1.32e-12 | 68.9 |
MsG0880043710.01.T01 | AT4G12560 | 22.841 | 359 | 245 | 12 | 12 | 349 | 4 | 351 | 1.32e-12 | 68.9 |
MsG0880043710.01.T01 | AT4G12560 | 22.841 | 359 | 245 | 12 | 12 | 349 | 4 | 351 | 1.32e-12 | 68.9 |
MsG0880043710.01.T01 | AT3G21410 | 21.867 | 375 | 223 | 14 | 5 | 351 | 31 | 363 | 1.90e-11 | 65.5 |
Find 66 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAAACATGTTCATAAAATA+AGG | 0.140768 | 8:+29532791 | None:intergenic |
GGTTCTATGGTGTACTTAAA+TGG | 0.198117 | 8:-29532278 | MsG0880043710.01.T01:CDS |
TGGAAGTTGTATTTGCTTTC+TGG | 0.198875 | 8:-29532704 | MsG0880043710.01.T01:CDS |
TTGATTCGCACAGTTTAAAA+TGG | 0.261313 | 8:-29532154 | MsG0880043710.01.T01:CDS |
TTGAATCGGTTTACTTGTTT+AGG | 0.276288 | 8:-29532842 | MsG0880043710.01.T01:CDS |
AATCAGAGGAATAAAGAATT+AGG | 0.292019 | 8:-29531823 | None:intergenic |
AGACACTTGACAGTGTTAAA+TGG | 0.299248 | 8:-29532125 | MsG0880043710.01.T01:CDS |
TAATTCTTTATTCCTCTGAT+TGG | 0.312071 | 8:+29531825 | None:intergenic |
GAACATGGTTACTAACCTTT+TGG | 0.317179 | 8:+29532912 | None:intergenic |
TATGACTTCGGAAGGTTCTA+TGG | 0.341136 | 8:-29532291 | MsG0880043710.01.T01:CDS |
ACTTCCATTCATAGTTTAGA+AGG | 0.350954 | 8:+29532720 | None:intergenic |
GTTCTATGGTGTACTTAAAT+GGG | 0.355733 | 8:-29532277 | MsG0880043710.01.T01:CDS |
TTCTTGTAAATTACTGTTTG+AGG | 0.370329 | 8:+29531858 | None:intergenic |
TTGGTTATATTGAAGATGAT+TGG | 0.388046 | 8:-29532406 | MsG0880043710.01.T01:CDS |
GCTTGTCTTGATTTAACTAC+TGG | 0.397331 | 8:-29531924 | MsG0880043710.01.T01:CDS |
GACACCACATATGTTTCAAT+TGG | 0.402727 | 8:+29532221 | None:intergenic |
AAAACATGTTCATAAAATAA+GGG | 0.412820 | 8:+29532792 | None:intergenic |
TACCTTTGAAATCTTTGAAT+CGG | 0.417435 | 8:-29532856 | MsG0880043710.01.T01:CDS |
TTCGATGTTGGACCTATGTC+CGG | 0.421122 | 8:-29532014 | MsG0880043710.01.T01:CDS |
TTACTTGTTTAGGTAAGTCT+TGG | 0.425909 | 8:-29532832 | MsG0880043710.01.T01:CDS |
AGAGGTTCATGTTCATATAT+CGG | 0.426129 | 8:+29532491 | None:intergenic |
CCGCGTTAGAGATGATTATA+AGG | 0.429589 | 8:-29532441 | MsG0880043710.01.T01:CDS |
TCCGGCATCGACCGTCCTAT+TGG | 0.429742 | 8:-29531996 | MsG0880043710.01.T01:CDS |
AAGGGAAAGAGAGTGGTAAC+AGG | 0.443693 | 8:+29532176 | None:intergenic |
TAAATGGGGTTTGCCATTGG+TGG | 0.446728 | 8:-29532262 | MsG0880043710.01.T01:CDS |
TAGACTATATATATCCCAAT+GGG | 0.446831 | 8:+29532361 | None:intergenic |
ACCTTCTTCCCTGCTCCAAT+AGG | 0.455077 | 8:+29531981 | None:intergenic |
AAATGGGGTTTGCCATTGGT+GGG | 0.458430 | 8:-29532261 | MsG0880043710.01.T01:CDS |
GTCTCCTTCTAAACTATGAA+TGG | 0.465509 | 8:-29532724 | MsG0880043710.01.T01:CDS |
ATCGACCGTCCTATTGGAGC+AGG | 0.470642 | 8:-29531990 | MsG0880043710.01.T01:CDS |
ACTTAAATGGGGTTTGCCAT+TGG | 0.484681 | 8:-29532265 | MsG0880043710.01.T01:CDS |
ATAGAGAAGACGATATCTTC+AGG | 0.486644 | 8:+29532890 | None:intergenic |
AGAACAAAGTTCAAATGAAG+TGG | 0.489818 | 8:-29532670 | MsG0880043710.01.T01:CDS |
TTTAAACTGTGCGAATCAAA+GGG | 0.515443 | 8:+29532158 | None:intergenic |
TCCAATAGGACGGTCGATGC+CGG | 0.515869 | 8:+29531995 | None:intergenic |
TCCTATTGGAGCAGGGAAGA+AGG | 0.519539 | 8:-29531982 | MsG0880043710.01.T01:CDS |
AACCCGGTGTCAATGAATCA+TGG | 0.530407 | 8:-29532046 | MsG0880043710.01.T01:CDS |
CTAAAACTGATATTGATATG+TGG | 0.532578 | 8:+29532072 | None:intergenic |
AATGGGGTTTGCCATTGGTG+GGG | 0.540748 | 8:-29532260 | MsG0880043710.01.T01:CDS |
TATGGCTCCAACAAACCAAA+AGG | 0.548250 | 8:-29532927 | MsG0880043710.01.T01:CDS |
ATAGTCTACGAAGCAACTGT+TGG | 0.555895 | 8:-29532346 | MsG0880043710.01.T01:CDS |
TATAAGGTCCTTCTGCATGT+TGG | 0.556222 | 8:-29532425 | MsG0880043710.01.T01:CDS |
GGACGGTCGATGCCGGACAT+AGG | 0.557007 | 8:+29532002 | None:intergenic |
AACCGATTCAAAGATTTCAA+AGG | 0.563964 | 8:+29532854 | None:intergenic |
AGTCCATGATTCATTGACAC+CGG | 0.564772 | 8:+29532043 | None:intergenic |
TTCTATGGTGTACTTAAATG+GGG | 0.582197 | 8:-29532276 | MsG0880043710.01.T01:CDS |
ATACGTCAACTACTGTCTTG+TGG | 0.585309 | 8:-29532559 | MsG0880043710.01.T01:CDS |
GCACGTTATATGACTTCGGA+AGG | 0.591015 | 8:-29532299 | MsG0880043710.01.T01:CDS |
GACTATATATATCCCAATGG+GGG | 0.594109 | 8:+29532363 | None:intergenic |
GTCCATGATTCATTGACACC+GGG | 0.603279 | 8:+29532044 | None:intergenic |
GTAGACTATATATATCCCAA+TGG | 0.606497 | 8:+29532360 | None:intergenic |
AGACGATATCTTCAGGAACA+TGG | 0.612978 | 8:+29532897 | None:intergenic |
TCTTCCCTGCTCCAATAGGA+CGG | 0.616942 | 8:+29531985 | None:intergenic |
CAATATAACCAACATGCAGA+AGG | 0.625088 | 8:+29532417 | None:intergenic |
TGAAGATGATTGGATTCCAG+TGG | 0.628561 | 8:-29532396 | MsG0880043710.01.T01:CDS |
GCGAGCACGTTATATGACTT+CGG | 0.628681 | 8:-29532303 | MsG0880043710.01.T01:CDS |
CGAATCAAAGGGAAAGAGAG+TGG | 0.639771 | 8:+29532169 | None:intergenic |
TAACAGGAACCTCATTGACC+AGG | 0.645812 | 8:+29532192 | None:intergenic |
CTTGTGGAATCCAGCTACCG+AGG | 0.647637 | 8:-29532543 | MsG0880043710.01.T01:CDS |
TCGACCAATTGAAACATATG+TGG | 0.655936 | 8:-29532225 | MsG0880043710.01.T01:CDS |
ACTGGAGTAATTGAGAACAT+TGG | 0.662781 | 8:-29531906 | MsG0880043710.01.T01:CDS |
ATACTTGAACCTAAAATACA+CGG | 0.666950 | 8:+29532614 | None:intergenic |
TCGACCGTCCTATTGGAGCA+GGG | 0.676854 | 8:-29531989 | MsG0880043710.01.T01:CDS |
AGACTATATATATCCCAATG+GGG | 0.681820 | 8:+29532362 | None:intergenic |
ACTATATATATCCCAATGGG+GGG | 0.682418 | 8:+29532364 | None:intergenic |
CCTTATAATCATCTCTAACG+CGG | 0.691260 | 8:+29532441 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACATGTTCATAAAATAA+GGG | + | Chr8:29531961-29531980 | None:intergenic | 15.0% |
!! | TAAAACATGTTCATAAAATA+AGG | + | Chr8:29531962-29531981 | None:intergenic | 15.0% |
!! | AAAAATATTATTCCAATCAG+AGG | - | Chr8:29532913-29532932 | MsG0880043710.01.T01:CDS | 20.0% |
!! | AAAAATTATTCCCGAAAATA+AGG | - | Chr8:29532234-29532253 | MsG0880043710.01.T01:CDS | 20.0% |
!! | AATCCATGAATATTAAAAAG+AGG | + | Chr8:29532280-29532299 | None:intergenic | 20.0% |
!!! | ATATTTTTGAGAAAAGATGA+TGG | - | Chr8:29532796-29532815 | MsG0880043710.01.T01:CDS | 20.0% |
!!! | ATTTTAGGTTCAAGTATTAA+TGG | - | Chr8:29532142-29532161 | MsG0880043710.01.T01:CDS | 20.0% |
!!! | CTTTTTAATATTCATGGATT+TGG | - | Chr8:29532280-29532299 | MsG0880043710.01.T01:CDS | 20.0% |
! | ATACTTGAACCTAAAATACA+CGG | + | Chr8:29532139-29532158 | None:intergenic | 25.0% |
! | CTAAAACTGATATTGATATG+TGG | + | Chr8:29532681-29532700 | None:intergenic | 25.0% |
! | TAATTCTTTATTCCTCTGAT+TGG | + | Chr8:29532928-29532947 | None:intergenic | 25.0% |
! | TAGACTATATATATCCCAAT+GGG | + | Chr8:29532392-29532411 | None:intergenic | 25.0% |
! | TTCTTGTAAATTACTGTTTG+AGG | + | Chr8:29532895-29532914 | None:intergenic | 25.0% |
! | TTGGTTATATTGAAGATGAT+TGG | - | Chr8:29532344-29532363 | MsG0880043710.01.T01:CDS | 25.0% |
!! | CACATATCAATATCAGTTTT+AGG | - | Chr8:29532679-29532698 | MsG0880043710.01.T01:CDS | 25.0% |
!! | GAACCTCTTTTTAATATTCA+TGG | - | Chr8:29532274-29532293 | MsG0880043710.01.T01:CDS | 25.0% |
!!! | GGGAATAATTTTTAATTCCT+CGG | + | Chr8:29532227-29532246 | None:intergenic | 25.0% |
!!! | TACCTTTGAAATCTTTGAAT+CGG | - | Chr8:29531894-29531913 | MsG0880043710.01.T01:CDS | 25.0% |
ACTTCCATTCATAGTTTAGA+AGG | + | Chr8:29532033-29532052 | None:intergenic | 30.0% | |
AGAACAAAGTTCAAATGAAG+TGG | - | Chr8:29532080-29532099 | MsG0880043710.01.T01:CDS | 30.0% | |
AGACTATATATATCCCAATG+GGG | + | Chr8:29532391-29532410 | None:intergenic | 30.0% | |
AGAGGTTCATGTTCATATAT+CGG | + | Chr8:29532262-29532281 | None:intergenic | 30.0% | |
GTAGACTATATATATCCCAA+TGG | + | Chr8:29532393-29532412 | None:intergenic | 30.0% | |
GTTCTATGGTGTACTTAAAT+GGG | - | Chr8:29532473-29532492 | MsG0880043710.01.T01:CDS | 30.0% | |
TTACTTGTTTAGGTAAGTCT+TGG | - | Chr8:29531918-29531937 | MsG0880043710.01.T01:CDS | 30.0% | |
TTCTATGGTGTACTTAAATG+GGG | - | Chr8:29532474-29532493 | MsG0880043710.01.T01:CDS | 30.0% | |
TTTAAACTGTGCGAATCAAA+GGG | + | Chr8:29532595-29532614 | None:intergenic | 30.0% | |
! | AACCGATTCAAAGATTTCAA+AGG | + | Chr8:29531899-29531918 | None:intergenic | 30.0% |
! | TGCTATTATCCGTGTATTTT+AGG | - | Chr8:29532127-29532146 | MsG0880043710.01.T01:CDS | 30.0% |
! | TTGAATCGGTTTACTTGTTT+AGG | - | Chr8:29531908-29531927 | MsG0880043710.01.T01:CDS | 30.0% |
! | TTGATTCGCACAGTTTAAAA+TGG | - | Chr8:29532596-29532615 | MsG0880043710.01.T01:CDS | 30.0% |
! | TTTTAAACTGTGCGAATCAA+AGG | + | Chr8:29532596-29532615 | None:intergenic | 30.0% |
!!! | ATATATCGGAGCCTTATTTT+CGG | + | Chr8:29532248-29532267 | None:intergenic | 30.0% |
!!! | TAGCAACCTTTTTTGTCAAA+AGG | + | Chr8:29532112-29532131 | None:intergenic | 30.0% |
!!! | TTACTAACCTTTTGGTTTGT+TGG | + | Chr8:29531833-29531852 | None:intergenic | 30.0% |
ACTATATATATCCCAATGGG+GGG | + | Chr8:29532389-29532408 | None:intergenic | 35.0% | |
ACTGGAGTAATTGAGAACAT+TGG | - | Chr8:29532844-29532863 | MsG0880043710.01.T01:CDS | 35.0% | |
AGACACTTGACAGTGTTAAA+TGG | - | Chr8:29532625-29532644 | MsG0880043710.01.T01:CDS | 35.0% | |
ATAGAGAAGACGATATCTTC+AGG | + | Chr8:29531863-29531882 | None:intergenic | 35.0% | |
CAATATAACCAACATGCAGA+AGG | + | Chr8:29532336-29532355 | None:intergenic | 35.0% | |
CCTTATAATCATCTCTAACG+CGG | + | Chr8:29532312-29532331 | None:intergenic | 35.0% | |
GACACCACATATGTTTCAAT+TGG | + | Chr8:29532532-29532551 | None:intergenic | 35.0% | |
GACTATATATATCCCAATGG+GGG | + | Chr8:29532390-29532409 | None:intergenic | 35.0% | |
GCTTGTCTTGATTTAACTAC+TGG | - | Chr8:29532826-29532845 | MsG0880043710.01.T01:CDS | 35.0% | |
GGTTCTATGGTGTACTTAAA+TGG | - | Chr8:29532472-29532491 | MsG0880043710.01.T01:CDS | 35.0% | |
GTCTCCTTCTAAACTATGAA+TGG | - | Chr8:29532026-29532045 | MsG0880043710.01.T01:CDS | 35.0% | |
TCGACCAATTGAAACATATG+TGG | - | Chr8:29532525-29532544 | MsG0880043710.01.T01:CDS | 35.0% | |
TGGAAGTTGTATTTGCTTTC+TGG | - | Chr8:29532046-29532065 | MsG0880043710.01.T01:CDS | 35.0% | |
! | AATATGTTTTTCCCCACCAA+TGG | + | Chr8:29532504-29532523 | None:intergenic | 35.0% |
! | CCACATCCTTTTGACAAAAA+AGG | - | Chr8:29532103-29532122 | MsG0880043710.01.T01:CDS | 35.0% |
! | GAACATGGTTACTAACCTTT+TGG | + | Chr8:29531841-29531860 | None:intergenic | 35.0% |
!! | ATTTTTAATTCCTCGGTAGC+TGG | + | Chr8:29532220-29532239 | None:intergenic | 35.0% |
!!! | ATATCAGTTTTAGGAGAACC+CGG | - | Chr8:29532688-29532707 | MsG0880043710.01.T01:CDS | 35.0% |
!!! | CCTTTTTTGTCAAAAGGATG+TGG | + | Chr8:29532106-29532125 | None:intergenic | 35.0% |
!!! | TATATCGGAGCCTTATTTTC+GGG | + | Chr8:29532247-29532266 | None:intergenic | 35.0% |
ACTTAAATGGGGTTTGCCAT+TGG | - | Chr8:29532485-29532504 | MsG0880043710.01.T01:CDS | 40.0% | |
AGACGATATCTTCAGGAACA+TGG | + | Chr8:29531856-29531875 | None:intergenic | 40.0% | |
AGTCCATGATTCATTGACAC+CGG | + | Chr8:29532710-29532729 | None:intergenic | 40.0% | |
ATACGTCAACTACTGTCTTG+TGG | - | Chr8:29532191-29532210 | MsG0880043710.01.T01:CDS | 40.0% | |
ATAGTCTACGAAGCAACTGT+TGG | - | Chr8:29532404-29532423 | MsG0880043710.01.T01:CDS | 40.0% | |
CCGCGTTAGAGATGATTATA+AGG | - | Chr8:29532309-29532328 | MsG0880043710.01.T01:CDS | 40.0% | |
TATAAGGTCCTTCTGCATGT+TGG | - | Chr8:29532325-29532344 | MsG0880043710.01.T01:CDS | 40.0% | |
TATGACTTCGGAAGGTTCTA+TGG | - | Chr8:29532459-29532478 | MsG0880043710.01.T01:CDS | 40.0% | |
TGAAGATGATTGGATTCCAG+TGG | - | Chr8:29532354-29532373 | MsG0880043710.01.T01:CDS | 40.0% | |
! | ATATGTGGTGTCTTTTGACC+TGG | - | Chr8:29532540-29532559 | MsG0880043710.01.T01:CDS | 40.0% |
! | TGGACTAAGCTTTTCGATGT+TGG | - | Chr8:29532724-29532743 | MsG0880043710.01.T01:CDS | 40.0% |
AAATGGGGTTTGCCATTGGT+GGG | - | Chr8:29532489-29532508 | MsG0880043710.01.T01:CDS | 45.0% | |
AAGGGAAAGAGAGTGGTAAC+AGG | + | Chr8:29532577-29532596 | None:intergenic | 45.0% | |
ATATATATCCCAATGGGGGG+CGG | + | Chr8:29532386-29532405 | None:intergenic | 45.0% | |
CGAATCAAAGGGAAAGAGAG+TGG | + | Chr8:29532584-29532603 | None:intergenic | 45.0% | |
GCACGTTATATGACTTCGGA+AGG | - | Chr8:29532451-29532470 | MsG0880043710.01.T01:CDS | 45.0% | |
GCGAGCACGTTATATGACTT+CGG | - | Chr8:29532447-29532466 | MsG0880043710.01.T01:CDS | 45.0% | |
GTCCATGATTCATTGACACC+GGG | + | Chr8:29532709-29532728 | None:intergenic | 45.0% | |
TAAATGGGGTTTGCCATTGG+TGG | - | Chr8:29532488-29532507 | MsG0880043710.01.T01:CDS | 45.0% | |
TAACAGGAACCTCATTGACC+AGG | + | Chr8:29532561-29532580 | None:intergenic | 45.0% | |
TTCGATGTTGGACCTATGTC+CGG | - | Chr8:29532736-29532755 | MsG0880043710.01.T01:CDS | 45.0% | |
! | AACCCGGTGTCAATGAATCA+TGG | - | Chr8:29532704-29532723 | MsG0880043710.01.T01:CDS | 45.0% |
! | GTCTTTTGACCTGGTCAATG+AGG | - | Chr8:29532549-29532568 | MsG0880043710.01.T01:CDS | 45.0% |
AATGGGGTTTGCCATTGGTG+GGG | - | Chr8:29532490-29532509 | MsG0880043710.01.T01:CDS | 50.0% | |
ACCTTCTTCCCTGCTCCAAT+AGG | + | Chr8:29532772-29532791 | None:intergenic | 50.0% | |
TATATATCCCAATGGGGGGC+GGG | + | Chr8:29532385-29532404 | None:intergenic | 50.0% | |
TCCTATTGGAGCAGGGAAGA+AGG | - | Chr8:29532768-29532787 | MsG0880043710.01.T01:CDS | 50.0% | |
TCTTCCCTGCTCCAATAGGA+CGG | + | Chr8:29532768-29532787 | None:intergenic | 50.0% | |
ATCGACCGTCCTATTGGAGC+AGG | - | Chr8:29532760-29532779 | MsG0880043710.01.T01:CDS | 55.0% | |
CTTGTGGAATCCAGCTACCG+AGG | - | Chr8:29532207-29532226 | MsG0880043710.01.T01:CDS | 55.0% | |
TCCAATAGGACGGTCGATGC+CGG | + | Chr8:29532758-29532777 | None:intergenic | 55.0% | |
TCGACCGTCCTATTGGAGCA+GGG | - | Chr8:29532761-29532780 | MsG0880043710.01.T01:CDS | 55.0% | |
!! | TCCGGCATCGACCGTCCTAT+TGG | - | Chr8:29532754-29532773 | MsG0880043710.01.T01:CDS | 60.0% |
ATATCCCAATGGGGGGCGGG+TGG | + | Chr8:29532382-29532401 | None:intergenic | 65.0% | |
GGACGGTCGATGCCGGACAT+AGG | + | Chr8:29532751-29532770 | None:intergenic | 65.0% | |
GGCACCACCCGCCCCCCATT+GGG | - | Chr8:29532375-29532394 | MsG0880043710.01.T01:CDS | 75.0% | |
TGGCACCACCCGCCCCCCAT+TGG | - | Chr8:29532374-29532393 | MsG0880043710.01.T01:CDS | 75.0% | |
!!! | TGGGGGGCGGGTGGTGCCAC+TGG | + | Chr8:29532373-29532392 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 29531824 | 29532948 | 29531824 | ID=MsG0880043710.01;Name=MsG0880043710.01 |
Chr8 | mRNA | 29531824 | 29532948 | 29531824 | ID=MsG0880043710.01.T01;Parent=MsG0880043710.01;Name=MsG0880043710.01.T01;_AED=0.41;_eAED=0.41;_QI=0|-1|0|1|-1|1|1|0|374 |
Chr8 | exon | 29531824 | 29532948 | 29531824 | ID=MsG0880043710.01.T01:exon:6955;Parent=MsG0880043710.01.T01 |
Chr8 | CDS | 29531824 | 29532948 | 29531824 | ID=MsG0880043710.01.T01:cds;Parent=MsG0880043710.01.T01 |
Gene Sequence |
Protein sequence |