Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043394.01.T01 | AET02721.1 | 55.814 | 387 | 107 | 10 | 1 | 346 | 1 | 364 | 1.62E-133 | 397 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043394.01.T01 | G7L8J7 | 55.814 | 387 | 107 | 10 | 1 | 346 | 1 | 364 | 7.73e-134 | 397 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043394.01.T01 | MTR_8g046220 | 55.814 | 387 | 107 | 10 | 1 | 346 | 1 | 364 | 1.96e-137 | 397 |
MsG0880043394.01.T01 | MTR_8g046200 | 52.141 | 397 | 122 | 11 | 1 | 346 | 1 | 380 | 5.57e-124 | 363 |
MsG0880043394.01.T01 | MTR_8g046310 | 53.784 | 370 | 117 | 12 | 1 | 348 | 1 | 338 | 9.90e-116 | 341 |
MsG0880043394.01.T01 | MTR_8g035690 | 56.552 | 290 | 93 | 7 | 59 | 345 | 1 | 260 | 1.94e-95 | 286 |
MsG0880043394.01.T01 | MTR_1g053510 | 43.766 | 393 | 139 | 15 | 1 | 343 | 1 | 361 | 1.16e-83 | 260 |
MsG0880043394.01.T01 | MTR_8g033140 | 42.564 | 390 | 162 | 13 | 2 | 346 | 3 | 375 | 4.66e-80 | 251 |
MsG0880043394.01.T01 | MTR_8g032980 | 44.643 | 392 | 158 | 16 | 1 | 346 | 1 | 379 | 5.29e-79 | 248 |
MsG0880043394.01.T01 | MTR_8g033110 | 44.041 | 386 | 156 | 15 | 1 | 343 | 1 | 369 | 4.98e-78 | 246 |
MsG0880043394.01.T01 | MTR_8g018110 | 40.470 | 383 | 155 | 15 | 1 | 342 | 1 | 351 | 1.11e-72 | 231 |
MsG0880043394.01.T01 | MTR_8g033090 | 41.489 | 376 | 154 | 18 | 16 | 343 | 10 | 367 | 2.10e-71 | 228 |
MsG0880043394.01.T01 | MTR_0129s0070 | 40.426 | 376 | 171 | 16 | 1 | 346 | 2 | 354 | 5.09e-66 | 214 |
MsG0880043394.01.T01 | MTR_8g012090 | 39.344 | 366 | 143 | 14 | 9 | 346 | 9 | 323 | 2.32e-64 | 208 |
MsG0880043394.01.T01 | MTR_8g063440 | 38.889 | 360 | 173 | 13 | 10 | 346 | 6 | 341 | 3.20e-64 | 209 |
MsG0880043394.01.T01 | MTR_2g034700 | 39.943 | 353 | 160 | 11 | 16 | 346 | 10 | 332 | 1.64e-63 | 207 |
MsG0880043394.01.T01 | MTR_0129s0120 | 39.362 | 376 | 175 | 16 | 1 | 346 | 2 | 354 | 3.46e-63 | 207 |
MsG0880043394.01.T01 | MTR_7g017130 | 37.500 | 352 | 167 | 10 | 22 | 341 | 20 | 350 | 1.57e-61 | 202 |
MsG0880043394.01.T01 | MTR_7g017170 | 37.535 | 357 | 160 | 12 | 22 | 341 | 20 | 350 | 1.61e-61 | 202 |
MsG0880043394.01.T01 | MTR_0054s0090 | 39.665 | 358 | 181 | 15 | 17 | 346 | 14 | 364 | 4.55e-60 | 199 |
MsG0880043394.01.T01 | MTR_1g007450 | 38.441 | 372 | 169 | 15 | 11 | 346 | 7 | 354 | 2.59e-59 | 197 |
MsG0880043394.01.T01 | MTR_7g069550 | 37.533 | 381 | 173 | 15 | 4 | 344 | 2 | 357 | 5.80e-59 | 196 |
MsG0880043394.01.T01 | MTR_0054s0100 | 38.889 | 360 | 183 | 15 | 17 | 346 | 14 | 366 | 7.66e-59 | 196 |
MsG0880043394.01.T01 | MTR_4g028510 | 38.017 | 363 | 181 | 14 | 11 | 342 | 7 | 356 | 2.23e-58 | 196 |
MsG0880043394.01.T01 | MTR_5g096910 | 38.082 | 365 | 165 | 12 | 16 | 346 | 13 | 350 | 3.95e-58 | 193 |
MsG0880043394.01.T01 | MTR_6g086825 | 36.486 | 370 | 187 | 10 | 9 | 343 | 59 | 415 | 2.14e-57 | 193 |
MsG0880043394.01.T01 | MTR_2g038680 | 37.280 | 397 | 164 | 17 | 2 | 346 | 5 | 368 | 2.37e-57 | 192 |
MsG0880043394.01.T01 | MTR_0129s0050 | 38.442 | 385 | 169 | 19 | 7 | 346 | 5 | 366 | 2.49e-57 | 192 |
MsG0880043394.01.T01 | MTR_8g033000 | 41.212 | 330 | 145 | 14 | 57 | 346 | 1 | 321 | 2.75e-57 | 190 |
MsG0880043394.01.T01 | MTR_4g117550 | 37.330 | 367 | 162 | 15 | 6 | 346 | 7 | 331 | 1.68e-56 | 189 |
MsG0880043394.01.T01 | MTR_5g097330 | 35.230 | 369 | 175 | 11 | 19 | 346 | 15 | 360 | 3.24e-56 | 189 |
MsG0880043394.01.T01 | MTR_5g096630 | 35.544 | 377 | 166 | 13 | 19 | 343 | 17 | 368 | 4.07e-56 | 189 |
MsG0880043394.01.T01 | MTR_4g028680 | 37.831 | 378 | 167 | 14 | 11 | 346 | 7 | 358 | 7.34e-56 | 187 |
MsG0880043394.01.T01 | MTR_4g102410 | 38.544 | 371 | 158 | 14 | 18 | 343 | 59 | 404 | 8.22e-56 | 189 |
MsG0880043394.01.T01 | MTR_5g037680 | 35.870 | 368 | 168 | 12 | 16 | 346 | 4 | 340 | 8.77e-55 | 186 |
MsG0880043394.01.T01 | MTR_4g028660 | 36.043 | 369 | 177 | 14 | 11 | 342 | 7 | 353 | 2.72e-54 | 183 |
MsG0880043394.01.T01 | MTR_4g027450 | 36.043 | 369 | 177 | 14 | 11 | 342 | 7 | 353 | 2.72e-54 | 183 |
MsG0880043394.01.T01 | MTR_3g011120 | 37.640 | 356 | 170 | 14 | 16 | 346 | 10 | 338 | 4.68e-54 | 182 |
MsG0880043394.01.T01 | MTR_2g104280 | 37.302 | 378 | 165 | 15 | 17 | 346 | 11 | 364 | 1.07e-53 | 182 |
MsG0880043394.01.T01 | MTR_2g022000 | 34.656 | 378 | 190 | 12 | 9 | 343 | 9 | 372 | 1.32e-53 | 182 |
MsG0880043394.01.T01 | MTR_7g017040 | 34.309 | 376 | 177 | 14 | 13 | 346 | 9 | 356 | 1.84e-53 | 181 |
MsG0880043394.01.T01 | MTR_4g055820 | 37.067 | 375 | 181 | 14 | 4 | 342 | 2 | 357 | 2.07e-53 | 180 |
MsG0880043394.01.T01 | MTR_8g464770 | 36.740 | 362 | 175 | 14 | 10 | 346 | 6 | 338 | 2.79e-53 | 180 |
MsG0880043394.01.T01 | MTR_5g097220 | 36.290 | 372 | 174 | 14 | 19 | 346 | 12 | 364 | 5.12e-53 | 181 |
MsG0880043394.01.T01 | MTR_5g097680 | 35.844 | 385 | 179 | 13 | 18 | 346 | 15 | 387 | 5.44e-53 | 181 |
MsG0880043394.01.T01 | MTR_7g079640 | 37.535 | 357 | 157 | 14 | 19 | 345 | 12 | 332 | 6.33e-53 | 179 |
MsG0880043394.01.T01 | MTR_6g080680 | 36.538 | 364 | 177 | 16 | 18 | 349 | 17 | 358 | 1.05e-52 | 179 |
MsG0880043394.01.T01 | MTR_8g064890 | 35.933 | 359 | 192 | 11 | 9 | 346 | 5 | 346 | 4.02e-52 | 177 |
MsG0880043394.01.T01 | MTR_4g028750 | 36.813 | 364 | 188 | 13 | 11 | 346 | 7 | 356 | 7.52e-52 | 177 |
MsG0880043394.01.T01 | MTR_6g090180 | 35.501 | 369 | 165 | 12 | 23 | 343 | 50 | 393 | 1.60e-51 | 177 |
MsG0880043394.01.T01 | MTR_2g021950 | 34.444 | 360 | 181 | 15 | 18 | 342 | 14 | 353 | 1.78e-51 | 176 |
MsG0880043394.01.T01 | MTR_8g467670 | 35.278 | 360 | 190 | 13 | 7 | 346 | 1 | 337 | 1.91e-51 | 176 |
MsG0880043394.01.T01 | MTR_4g130330 | 36.288 | 361 | 179 | 13 | 16 | 343 | 3 | 345 | 4.27e-51 | 175 |
MsG0880043394.01.T01 | MTR_2g021770 | 33.065 | 372 | 195 | 12 | 19 | 348 | 11 | 370 | 4.58e-51 | 175 |
MsG0880043394.01.T01 | MTR_0134s0060 | 36.585 | 369 | 178 | 15 | 22 | 346 | 14 | 370 | 7.88e-51 | 175 |
MsG0880043394.01.T01 | MTR_1g007410 | 35.142 | 387 | 185 | 16 | 1 | 346 | 1 | 362 | 1.66e-50 | 174 |
MsG0880043394.01.T01 | MTR_8g013000 | 36.486 | 370 | 172 | 15 | 17 | 346 | 7 | 353 | 4.19e-50 | 173 |
MsG0880043394.01.T01 | MTR_8g039500 | 37.151 | 358 | 174 | 15 | 10 | 345 | 6 | 334 | 1.01e-49 | 170 |
MsG0880043394.01.T01 | MTR_2g064950 | 34.986 | 363 | 182 | 13 | 17 | 346 | 7 | 348 | 1.23e-49 | 171 |
MsG0880043394.01.T01 | MTR_5g069390 | 34.959 | 369 | 181 | 12 | 16 | 343 | 22 | 372 | 1.33e-49 | 174 |
MsG0880043394.01.T01 | MTR_1g007430 | 36.390 | 349 | 173 | 14 | 24 | 347 | 1 | 325 | 1.62e-49 | 169 |
MsG0880043394.01.T01 | MTR_6g079770 | 35.904 | 376 | 181 | 15 | 17 | 346 | 14 | 375 | 2.52e-49 | 171 |
MsG0880043394.01.T01 | MTR_2g021800 | 34.264 | 394 | 171 | 13 | 9 | 343 | 9 | 373 | 8.41e-49 | 169 |
MsG0880043394.01.T01 | MTR_6g461660 | 35.135 | 370 | 187 | 15 | 7 | 345 | 10 | 357 | 1.83e-48 | 168 |
MsG0880043394.01.T01 | MTR_5g059430 | 34.414 | 401 | 185 | 16 | 2 | 346 | 5 | 383 | 5.79e-48 | 167 |
MsG0880043394.01.T01 | MTR_8g036970 | 37.069 | 348 | 126 | 12 | 24 | 346 | 2 | 281 | 9.45e-48 | 166 |
MsG0880043394.01.T01 | MTR_6g079810 | 35.092 | 379 | 193 | 14 | 12 | 349 | 60 | 426 | 2.74e-47 | 167 |
MsG0880043394.01.T01 | MTR_5g072060 | 35.262 | 363 | 162 | 13 | 18 | 344 | 4 | 329 | 3.46e-47 | 169 |
MsG0880043394.01.T01 | MTR_8g063330 | 33.596 | 381 | 182 | 16 | 15 | 354 | 9 | 359 | 1.39e-46 | 165 |
MsG0880043394.01.T01 | MTR_2g066200 | 34.483 | 377 | 185 | 16 | 1 | 346 | 1 | 346 | 1.60e-46 | 163 |
MsG0880043394.01.T01 | MTR_7g016930 | 34.857 | 350 | 168 | 15 | 11 | 336 | 11 | 324 | 2.93e-46 | 160 |
MsG0880043394.01.T01 | MTR_2g065860 | 35.244 | 349 | 184 | 13 | 22 | 345 | 14 | 345 | 3.04e-46 | 162 |
MsG0880043394.01.T01 | MTR_8g063370 | 35.159 | 347 | 188 | 12 | 15 | 344 | 19 | 345 | 3.18e-46 | 162 |
MsG0880043394.01.T01 | MTR_5g024260 | 35.171 | 381 | 179 | 16 | 3 | 343 | 8 | 360 | 4.41e-46 | 162 |
MsG0880043394.01.T01 | MTR_5g092850 | 33.875 | 369 | 184 | 16 | 16 | 346 | 12 | 358 | 5.86e-46 | 162 |
MsG0880043394.01.T01 | MTR_2g066170 | 35.519 | 366 | 180 | 16 | 10 | 346 | 6 | 344 | 6.45e-46 | 161 |
MsG0880043394.01.T01 | MTR_0831s0010 | 34.188 | 351 | 167 | 15 | 9 | 325 | 39 | 359 | 5.37e-45 | 159 |
MsG0880043394.01.T01 | MTR_5g074850 | 36.066 | 366 | 181 | 15 | 18 | 346 | 33 | 382 | 6.68e-45 | 165 |
MsG0880043394.01.T01 | MTR_4g014370 | 35.844 | 385 | 173 | 18 | 9 | 343 | 4 | 364 | 4.06e-44 | 157 |
MsG0880043394.01.T01 | MTR_5g097350 | 36.556 | 331 | 142 | 14 | 29 | 322 | 25 | 324 | 5.13e-44 | 156 |
MsG0880043394.01.T01 | MTR_2g065840 | 33.908 | 348 | 187 | 13 | 24 | 346 | 16 | 345 | 4.02e-43 | 154 |
MsG0880043394.01.T01 | MTR_5g091140 | 34.351 | 393 | 155 | 17 | 1 | 345 | 36 | 373 | 1.86e-42 | 153 |
MsG0880043394.01.T01 | MTR_2g104340 | 34.232 | 371 | 199 | 14 | 4 | 346 | 2 | 355 | 3.11e-42 | 152 |
MsG0880043394.01.T01 | MTR_8g041270 | 34.518 | 394 | 181 | 19 | 1 | 346 | 1 | 365 | 3.80e-42 | 152 |
MsG0880043394.01.T01 | MTR_6g478230 | 33.422 | 374 | 171 | 14 | 15 | 343 | 22 | 362 | 1.45e-41 | 150 |
MsG0880043394.01.T01 | MTR_7g104710 | 34.615 | 338 | 133 | 12 | 1 | 302 | 1 | 286 | 1.47e-41 | 148 |
MsG0880043394.01.T01 | MTR_5g075370 | 34.771 | 371 | 188 | 19 | 15 | 346 | 3 | 358 | 9.00e-41 | 153 |
MsG0880043394.01.T01 | MTR_5g096900 | 35.650 | 331 | 148 | 12 | 18 | 310 | 10 | 313 | 4.06e-40 | 144 |
MsG0880043394.01.T01 | MTR_7g111700 | 33.242 | 364 | 166 | 15 | 13 | 346 | 8 | 324 | 1.42e-39 | 144 |
MsG0880043394.01.T01 | MTR_8g064790 | 33.978 | 362 | 144 | 16 | 8 | 346 | 6 | 295 | 6.64e-39 | 141 |
MsG0880043394.01.T01 | MTR_5g074800 | 36.025 | 322 | 150 | 14 | 59 | 344 | 1 | 302 | 8.09e-38 | 139 |
MsG0880043394.01.T01 | MTR_5g043605 | 32.665 | 349 | 152 | 14 | 13 | 346 | 18 | 298 | 3.42e-37 | 137 |
MsG0880043394.01.T01 | MTR_2g066150 | 32.951 | 349 | 171 | 15 | 19 | 346 | 11 | 317 | 4.02e-35 | 132 |
MsG0880043394.01.T01 | MTR_5g022850 | 32.399 | 321 | 166 | 13 | 17 | 327 | 13 | 292 | 2.65e-34 | 129 |
MsG0880043394.01.T01 | MTR_1g098180 | 31.880 | 367 | 182 | 16 | 1 | 344 | 1 | 322 | 3.77e-34 | 129 |
MsG0880043394.01.T01 | MTR_5g086590 | 34.855 | 241 | 103 | 9 | 124 | 346 | 13 | 217 | 1.80e-33 | 124 |
MsG0880043394.01.T01 | MTR_6g090250 | 31.844 | 358 | 181 | 12 | 40 | 343 | 31 | 379 | 6.90e-33 | 127 |
MsG0880043394.01.T01 | MTR_5g068490 | 33.818 | 275 | 130 | 11 | 81 | 346 | 6 | 237 | 1.06e-32 | 123 |
MsG0880043394.01.T01 | MTR_6g078010 | 35.252 | 278 | 135 | 10 | 81 | 343 | 43 | 290 | 1.13e-32 | 125 |
MsG0880043394.01.T01 | MTR_5g094350 | 33.103 | 290 | 135 | 10 | 18 | 273 | 11 | 275 | 1.00e-31 | 120 |
MsG0880043394.01.T01 | MTR_8g073570 | 42.484 | 153 | 62 | 5 | 15 | 146 | 5 | 152 | 2.74e-31 | 116 |
MsG0880043394.01.T01 | MTR_5g097820 | 32.056 | 287 | 142 | 11 | 2 | 257 | 5 | 269 | 4.29e-31 | 119 |
MsG0880043394.01.T01 | MTR_5g092860 | 30.409 | 342 | 173 | 15 | 39 | 346 | 21 | 331 | 6.46e-31 | 120 |
MsG0880043394.01.T01 | MTR_5g097650 | 43.871 | 155 | 60 | 5 | 19 | 163 | 21 | 158 | 1.20e-29 | 112 |
MsG0880043394.01.T01 | MTR_1g047080 | 36.226 | 265 | 91 | 11 | 57 | 288 | 1 | 220 | 1.26e-29 | 115 |
MsG0880043394.01.T01 | MTR_1g076810 | 34.615 | 260 | 117 | 8 | 9 | 241 | 11 | 244 | 2.31e-29 | 119 |
MsG0880043394.01.T01 | MTR_4g007940 | 32.660 | 297 | 132 | 12 | 81 | 343 | 35 | 297 | 3.00e-29 | 115 |
MsG0880043394.01.T01 | MTR_1g050308 | 30.233 | 344 | 144 | 11 | 22 | 343 | 36 | 305 | 1.78e-28 | 114 |
MsG0880043394.01.T01 | MTR_8g063350 | 28.863 | 343 | 183 | 14 | 15 | 346 | 9 | 301 | 3.63e-28 | 112 |
MsG0880043394.01.T01 | MTR_5g064700 | 31.667 | 300 | 154 | 10 | 83 | 346 | 44 | 328 | 1.12e-27 | 112 |
MsG0880043394.01.T01 | MTR_6g087620 | 31.679 | 262 | 127 | 8 | 104 | 349 | 26 | 251 | 1.59e-27 | 109 |
MsG0880043394.01.T01 | MTR_5g076490 | 45.113 | 133 | 62 | 2 | 206 | 327 | 144 | 276 | 1.63e-27 | 110 |
MsG0880043394.01.T01 | MTR_6g070880 | 37.768 | 233 | 107 | 8 | 18 | 221 | 30 | 253 | 2.64e-27 | 108 |
MsG0880043394.01.T01 | MTR_6g071420 | 37.768 | 233 | 107 | 8 | 18 | 221 | 30 | 253 | 2.64e-27 | 108 |
MsG0880043394.01.T01 | MTR_5g097540 | 45.517 | 145 | 72 | 4 | 206 | 348 | 96 | 235 | 3.04e-27 | 109 |
MsG0880043394.01.T01 | MTR_6g009350 | 42.073 | 164 | 79 | 5 | 190 | 345 | 34 | 189 | 3.46e-27 | 106 |
MsG0880043394.01.T01 | MTR_8g063310 | 27.869 | 366 | 203 | 15 | 10 | 344 | 16 | 351 | 1.31e-26 | 109 |
MsG0880043394.01.T01 | MTR_6g079790 | 31.673 | 281 | 157 | 10 | 86 | 346 | 2 | 267 | 1.35e-26 | 107 |
MsG0880043394.01.T01 | MTR_6g004450 | 43.709 | 151 | 69 | 6 | 204 | 346 | 85 | 227 | 5.48e-26 | 105 |
MsG0880043394.01.T01 | MTR_5g037190 | 29.392 | 296 | 128 | 10 | 1 | 260 | 1 | 251 | 2.96e-25 | 102 |
MsG0880043394.01.T01 | MTR_5g023970 | 41.216 | 148 | 78 | 5 | 205 | 346 | 9 | 153 | 3.45e-25 | 101 |
MsG0880043394.01.T01 | MTR_5g096920 | 44.545 | 110 | 59 | 1 | 239 | 346 | 1 | 110 | 7.53e-25 | 99.0 |
MsG0880043394.01.T01 | MTR_5g096070 | 46.032 | 126 | 50 | 4 | 18 | 139 | 24 | 135 | 8.06e-25 | 99.4 |
MsG0880043394.01.T01 | MTR_5g097850 | 45.070 | 142 | 61 | 6 | 212 | 341 | 63 | 199 | 3.06e-24 | 100 |
MsG0880043394.01.T01 | MTR_2g021920 | 41.176 | 153 | 75 | 6 | 203 | 343 | 81 | 230 | 6.47e-24 | 99.8 |
MsG0880043394.01.T01 | MTR_6g090260 | 43.243 | 148 | 72 | 5 | 205 | 343 | 73 | 217 | 1.62e-23 | 98.6 |
MsG0880043394.01.T01 | MTR_6g090260 | 56.140 | 57 | 25 | 0 | 16 | 72 | 16 | 72 | 8.12e-13 | 68.2 |
MsG0880043394.01.T01 | MTR_7g023800 | 29.630 | 324 | 137 | 12 | 59 | 346 | 1 | 269 | 1.80e-23 | 99.4 |
MsG0880043394.01.T01 | MTR_1g115205 | 33.852 | 257 | 107 | 12 | 11 | 245 | 20 | 235 | 4.45e-23 | 97.1 |
MsG0880043394.01.T01 | MTR_2g104260 | 31.757 | 296 | 148 | 12 | 4 | 265 | 2 | 277 | 1.98e-22 | 95.9 |
MsG0880043394.01.T01 | MTR_1g050312 | 33.088 | 272 | 131 | 13 | 83 | 346 | 25 | 253 | 9.17e-22 | 94.4 |
MsG0880043394.01.T01 | MTR_5g066420 | 44.538 | 119 | 54 | 3 | 239 | 346 | 1 | 118 | 1.31e-21 | 90.1 |
MsG0880043394.01.T01 | MTR_6g465360 | 41.071 | 168 | 66 | 8 | 5 | 148 | 50 | 208 | 3.97e-21 | 92.4 |
MsG0880043394.01.T01 | MTR_3g019290 | 36.607 | 224 | 79 | 10 | 4 | 212 | 2 | 177 | 6.40e-21 | 89.4 |
MsG0880043394.01.T01 | MTR_8g041440 | 50.000 | 94 | 40 | 1 | 19 | 105 | 14 | 107 | 7.73e-21 | 87.0 |
MsG0880043394.01.T01 | MTR_3g018750 | 41.912 | 136 | 55 | 5 | 204 | 322 | 45 | 173 | 2.96e-20 | 89.0 |
MsG0880043394.01.T01 | MTR_4g016000 | 40.876 | 137 | 70 | 5 | 205 | 341 | 68 | 193 | 5.54e-20 | 87.8 |
MsG0880043394.01.T01 | MTR_7g017150 | 40.385 | 156 | 80 | 6 | 206 | 354 | 81 | 230 | 6.18e-20 | 88.6 |
MsG0880043394.01.T01 | MTR_7g017120 | 39.744 | 156 | 81 | 6 | 206 | 354 | 80 | 229 | 1.75e-19 | 87.4 |
MsG0880043394.01.T01 | MTR_5g091150 | 31.304 | 230 | 89 | 10 | 86 | 293 | 2 | 184 | 2.03e-19 | 85.9 |
MsG0880043394.01.T01 | MTR_3g047580 | 37.097 | 124 | 67 | 4 | 18 | 138 | 12 | 127 | 2.13e-19 | 83.6 |
MsG0880043394.01.T01 | MTR_4g014370 | 41.481 | 135 | 49 | 6 | 9 | 122 | 15 | 140 | 1.72e-18 | 85.9 |
MsG0880043394.01.T01 | MTR_4g014370 | 36.986 | 146 | 76 | 5 | 207 | 343 | 154 | 292 | 7.85e-16 | 78.2 |
MsG0880043394.01.T01 | MTR_7g019250 | 39.716 | 141 | 66 | 4 | 206 | 342 | 265 | 390 | 2.81e-18 | 86.3 |
MsG0880043394.01.T01 | MTR_5g098950 | 32.735 | 223 | 110 | 9 | 126 | 346 | 90 | 274 | 1.00e-17 | 82.4 |
MsG0880043394.01.T01 | MTR_5g096050 | 45.192 | 104 | 40 | 3 | 239 | 325 | 1 | 104 | 1.57e-17 | 78.2 |
MsG0880043394.01.T01 | MTR_2g031720 | 24.024 | 333 | 184 | 12 | 20 | 322 | 6 | 299 | 9.52e-16 | 78.2 |
MsG0880043394.01.T01 | MTR_3g030620 | 37.815 | 119 | 62 | 3 | 239 | 346 | 23 | 140 | 3.48e-15 | 73.2 |
MsG0880043394.01.T01 | MTR_1g097330 | 25.392 | 319 | 181 | 15 | 22 | 322 | 18 | 297 | 1.54e-14 | 74.7 |
MsG0880043394.01.T01 | MTR_5g097660 | 50.000 | 70 | 35 | 0 | 277 | 346 | 9 | 78 | 2.14e-14 | 69.3 |
MsG0880043394.01.T01 | MTR_4g024890 | 24.260 | 338 | 179 | 14 | 22 | 322 | 12 | 309 | 2.42e-14 | 73.9 |
MsG0880043394.01.T01 | MTR_7g101200 | 31.915 | 235 | 99 | 13 | 124 | 343 | 38 | 226 | 2.75e-14 | 72.0 |
MsG0880043394.01.T01 | MTR_2g028130 | 24.189 | 339 | 199 | 13 | 18 | 323 | 3 | 316 | 5.84e-14 | 72.8 |
MsG0880043394.01.T01 | MTR_7g055930 | 25.833 | 360 | 196 | 12 | 20 | 329 | 13 | 351 | 8.21e-14 | 72.4 |
MsG0880043394.01.T01 | MTR_3g014570 | 25.460 | 326 | 183 | 14 | 20 | 323 | 29 | 316 | 1.63e-12 | 68.6 |
MsG0880043394.01.T01 | MTR_3g047540 | 51.515 | 66 | 28 | 2 | 206 | 269 | 5 | 68 | 2.27e-12 | 62.8 |
MsG0880043394.01.T01 | MTR_3g014540 | 24.922 | 321 | 189 | 12 | 20 | 322 | 29 | 315 | 3.48e-12 | 67.4 |
MsG0880043394.01.T01 | MTR_2g031680 | 25.150 | 334 | 195 | 15 | 20 | 334 | 6 | 303 | 4.79e-12 | 67.0 |
MsG0880043394.01.T01 | MTR_6g079730 | 40.000 | 95 | 54 | 2 | 251 | 343 | 12 | 105 | 7.65e-12 | 63.2 |
MsG0880043394.01.T01 | MTR_1g023400 | 26.409 | 337 | 166 | 17 | 23 | 325 | 6 | 294 | 7.77e-12 | 66.2 |
MsG0880043394.01.T01 | MTR_5g086780 | 53.030 | 66 | 25 | 2 | 1 | 64 | 1 | 62 | 8.03e-12 | 64.7 |
MsG0880043394.01.T01 | MTR_5g086780 | 40.909 | 88 | 49 | 2 | 261 | 346 | 124 | 210 | 6.84e-11 | 62.0 |
MsG0880043394.01.T01 | MTR_4g061340 | 24.148 | 352 | 197 | 17 | 23 | 349 | 29 | 335 | 1.07e-11 | 65.9 |
MsG0880043394.01.T01 | MTR_4g133170 | 23.684 | 342 | 213 | 16 | 23 | 346 | 7 | 318 | 1.34e-11 | 65.9 |
MsG0880043394.01.T01 | MTR_2g046830 | 25.073 | 343 | 188 | 17 | 8 | 322 | 7 | 308 | 1.57e-11 | 65.5 |
MsG0880043394.01.T01 | MTR_4g094400 | 34.615 | 104 | 48 | 3 | 237 | 320 | 8 | 111 | 2.69e-11 | 60.8 |
MsG0880043394.01.T01 | MTR_2g026010 | 23.962 | 313 | 171 | 16 | 39 | 322 | 23 | 297 | 4.16e-11 | 64.3 |
MsG0880043394.01.T01 | MTR_7g060960 | 23.602 | 322 | 174 | 12 | 20 | 323 | 32 | 299 | 4.85e-11 | 63.9 |
MsG0880043394.01.T01 | MTR_5g057020 | 25.321 | 312 | 176 | 12 | 23 | 322 | 49 | 315 | 9.65e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 86 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTTGTCTCTTCAGATTT+TGG | 0.057371 | 8:-24158598 | MsG0880043394.01.T01:CDS |
ATGAATTTGGTGGAGTTAAA+TGG | 0.132874 | 8:-24157969 | MsG0880043394.01.T01:CDS |
TCAAGCTGTATGACCCTTTC+TGG | 0.190510 | 8:-24158211 | MsG0880043394.01.T01:CDS |
TTGGGTTCTGCTAGTGTTAA+TGG | 0.217540 | 8:-24158579 | MsG0880043394.01.T01:CDS |
CGACACTATATTCGGTTCTT+TGG | 0.222961 | 8:+24158067 | None:intergenic |
TAAATCAATGAAAATGAATT+TGG | 0.255589 | 8:-24157982 | MsG0880043394.01.T01:CDS |
AAAATCCAAATGTGAAAATA+AGG | 0.287871 | 8:+24157912 | None:intergenic |
ATCATCGGCCTCGCCATGTT+TGG | 0.296954 | 8:+24158758 | None:intergenic |
GAGGGATTTGATAGGCAATT+TGG | 0.305533 | 8:+24158869 | None:intergenic |
TGTAAATCAGTCTCCCAAAA+AGG | 0.357509 | 8:+24158281 | None:intergenic |
AGAGATAATAGAACAAGTTA+AGG | 0.359769 | 8:+24157839 | None:intergenic |
ATAGCCTCAATAGTAATTCT+TGG | 0.368665 | 8:-24158181 | MsG0880043394.01.T01:CDS |
CAATCTCCACCTCGTGGATT+CGG | 0.370705 | 8:-24158400 | MsG0880043394.01.T01:intron |
ATCTTAAATTCCGCTGTAGC+AGG | 0.378200 | 8:+24158513 | None:intergenic |
ATGTTTGGGTATGAAGAAAT+TGG | 0.378366 | 8:+24158773 | None:intergenic |
AGAATAGGGTTAGTCTAGAT+TGG | 0.381689 | 8:-24158653 | MsG0880043394.01.T01:intron |
TGAATTTGGTGGAGTTAAAT+GGG | 0.382999 | 8:-24157968 | MsG0880043394.01.T01:CDS |
TCACTGTCATGCTCTTGAAT+TGG | 0.390855 | 8:+24158624 | None:intergenic |
TCATCGGCCTCGCCATGTTT+GGG | 0.397838 | 8:+24158759 | None:intergenic |
TTACCGAGGTGTTATGTCTC+TGG | 0.400759 | 8:-24158123 | MsG0880043394.01.T01:CDS |
AATTCCGGTGGAAGGTTAAG+AGG | 0.405189 | 8:+24158486 | None:intergenic |
GATAGGCAATTTGGAGAGAA+TGG | 0.410211 | 8:+24158878 | None:intergenic |
TATATCTGAGTTAGAAGGTA+AGG | 0.411348 | 8:+24158010 | None:intergenic |
ATTATCTCTGCTATCTCAGC+AGG | 0.428958 | 8:-24157825 | MsG0880043394.01.T01:CDS |
CTGTCATGCTCTTGAATTGG+AGG | 0.433043 | 8:+24158627 | None:intergenic |
CAAGAATCGTATATTCTTCA+AGG | 0.441181 | 8:-24157799 | MsG0880043394.01.T01:CDS |
TGGACTAAATTCTTTGTTGT+CGG | 0.444286 | 8:-24157864 | MsG0880043394.01.T01:CDS |
GGCGCTGTTTGTCTCTTCAA+AGG | 0.444804 | 8:-24158558 | MsG0880043394.01.T01:CDS |
GAATTTAGTCCATGATTCCT+TGG | 0.448941 | 8:+24157875 | None:intergenic |
CAAGCTGTATGACCCTTTCT+GGG | 0.453311 | 8:-24158210 | MsG0880043394.01.T01:CDS |
AAGTCAAACGACACTATATT+CGG | 0.455328 | 8:+24158059 | None:intergenic |
GTTGAAGCTCGTATGGTTCA+AGG | 0.455344 | 8:+24158445 | None:intergenic |
GCGCTGTTTGTCTCTTCAAA+GGG | 0.478345 | 8:-24158557 | MsG0880043394.01.T01:CDS |
AACTCGGTGCCAAGGAATCA+TGG | 0.480402 | 8:-24157884 | MsG0880043394.01.T01:CDS |
ACCCTGTCTCTTCCTTTAGC+AGG | 0.483431 | 8:+24158724 | None:intergenic |
TCTCTTCCTTTAGCAGGAGA+CGG | 0.484368 | 8:+24158730 | None:intergenic |
ATCAATGAAAATGAATTTGG+TGG | 0.496608 | 8:-24157979 | MsG0880043394.01.T01:CDS |
CTCTTCCTTTAGCAGGAGAC+GGG | 0.497762 | 8:+24158731 | None:intergenic |
CTTACATCACTTGTTATGAC+AGG | 0.500154 | 8:-24157938 | MsG0880043394.01.T01:CDS |
GGAGAAATGATCTTAAATTC+CGG | 0.500514 | 8:+24158471 | None:intergenic |
GAGATAATAGAACAAGTTAA+GGG | 0.501009 | 8:+24157840 | None:intergenic |
CGGAACATGTTCATGAAAGT+GGG | 0.504526 | 8:+24158798 | None:intergenic |
TTCCACCCGTCTCCTGCTAA+AGG | 0.513466 | 8:-24158736 | MsG0880043394.01.T01:CDS |
TCGTATGGTTGAAGCTCGTA+TGG | 0.518772 | 8:+24158438 | None:intergenic |
AAACGTGTGAGGGATTTGAT+AGG | 0.521173 | 8:+24158861 | None:intergenic |
TCCTCCAAGAATTACTATTG+AGG | 0.521781 | 8:+24158177 | None:intergenic |
GGCTATATATCTCCCAGAAA+GGG | 0.526405 | 8:+24158198 | None:intergenic |
CAGGAGACGGGTGGAATCAT+CGG | 0.530316 | 8:+24158743 | None:intergenic |
AGGCTATATATCTCCCAGAA+AGG | 0.531723 | 8:+24158197 | None:intergenic |
GCGGAACATGTTCATGAAAG+TGG | 0.532508 | 8:+24158797 | None:intergenic |
GTTCTTTGGCCGCCAACCAA+TGG | 0.537690 | 8:+24158081 | None:intergenic |
TGATCTTAAATTCCGGTGGA+AGG | 0.539644 | 8:+24158478 | None:intergenic |
AGCTCGTATGGTTCAAGGCT+AGG | 0.540657 | 8:+24158450 | None:intergenic |
ATATCTGAGTTAGAAGGTAA+GGG | 0.543510 | 8:+24158011 | None:intergenic |
ATTCTTGGAGGAAACTCGAT+GGG | 0.543933 | 8:-24158166 | MsG0880043394.01.T01:CDS |
CCCAAAATCTGAAGAGACAA+AGG | 0.544756 | 8:+24158597 | None:intergenic |
ATTGTGGAACCCTGCTACAG+CGG | 0.546067 | 8:-24158523 | MsG0880043394.01.T01:CDS |
ACTTCATGGCTGCTGCTACA+AGG | 0.549422 | 8:-24158962 | None:intergenic |
GCCTCAATAGTAATTCTTGG+AGG | 0.552486 | 8:-24158178 | MsG0880043394.01.T01:CDS |
AAACGGATAAGTTCCTCGTA+TGG | 0.552697 | 8:+24158423 | None:intergenic |
ATGTCTCTGGTAAACATGAA+TGG | 0.554831 | 8:-24158110 | MsG0880043394.01.T01:CDS |
TTTGGGTGAACTCGGTGCCA+AGG | 0.555256 | 8:-24157892 | MsG0880043394.01.T01:CDS |
CGTTCCTCTTAACCTTCCAC+CGG | 0.557183 | 8:-24158490 | MsG0880043394.01.T01:CDS |
CTCCTGCTAAAGGAAGAGAC+AGG | 0.565309 | 8:-24158726 | MsG0880043394.01.T01:CDS |
CCACGAGGTGGAGATTGAAA+CGG | 0.567669 | 8:+24158406 | None:intergenic |
CCGTTTCAATCTCCACCTCG+TGG | 0.568418 | 8:-24158406 | MsG0880043394.01.T01:CDS |
TCTTAAATTCCGCTGTAGCA+GGG | 0.570949 | 8:+24158514 | None:intergenic |
TTCCTTTAGCAGGAGACGGG+TGG | 0.578770 | 8:+24158734 | None:intergenic |
TCATGCTCTTGAATTGGAGG+TGG | 0.583409 | 8:+24158630 | None:intergenic |
ATAAAGCAATATCGTCATGT+AGG | 0.595731 | 8:+24158901 | None:intergenic |
GAGCACAAGTGAAACGTGTG+AGG | 0.599763 | 8:+24158850 | None:intergenic |
AGCACAAGTGAAACGTGTGA+GGG | 0.609247 | 8:+24158851 | None:intergenic |
CTTCATACCCAAACATGGCG+AGG | 0.611223 | 8:-24158766 | MsG0880043394.01.T01:CDS |
GAAATGATCTTAAATTCCGG+TGG | 0.616703 | 8:+24158474 | None:intergenic |
AATTTCTTCATACCCAAACA+TGG | 0.618872 | 8:-24158771 | MsG0880043394.01.T01:CDS |
AATTCTTGGAGGAAACTCGA+TGG | 0.635416 | 8:-24158167 | MsG0880043394.01.T01:CDS |
TCCTGCTAAAGGAAGAGACA+GGG | 0.676045 | 8:-24158725 | MsG0880043394.01.T01:intron |
GGAACATGTTCATGAAAGTG+GGG | 0.676873 | 8:+24158799 | None:intergenic |
TTATCTCTGCTATCTCAGCA+GGG | 0.687700 | 8:-24157824 | MsG0880043394.01.T01:CDS |
TCATAACCGAATCCACGAGG+TGG | 0.700131 | 8:+24158394 | None:intergenic |
TTCTTGGAGGAAACTCGATG+GGG | 0.704947 | 8:-24158165 | MsG0880043394.01.T01:CDS |
ATACGAGCTTCAACCATACG+AGG | 0.710125 | 8:-24158436 | MsG0880043394.01.T01:CDS |
TACAAGGATAGATACGAACA+AGG | 0.711970 | 8:-24158946 | MsG0880043394.01.T01:CDS |
TGGGTATGAAGAAATTGGTG+CGG | 0.716010 | 8:+24158778 | None:intergenic |
GAGTCATAACCGAATCCACG+AGG | 0.747734 | 8:+24158391 | None:intergenic |
TTACCAGAGACATAACACCT+CGG | 0.793633 | 8:+24158120 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATCAATGAAAATGAATT+TGG | - | Chr8:24158727-24158746 | MsG0880043394.01.T01:CDS | 15.0% |
!! | AAAATCCAAATGTGAAAATA+AGG | + | Chr8:24158800-24158819 | None:intergenic | 20.0% |
!!! | AGATATGAATGACAATTTTT+GGG | - | Chr8:24158457-24158476 | MsG0880043394.01.T01:CDS | 20.0% |
!!! | TAGATATGAATGACAATTTT+TGG | - | Chr8:24158456-24158475 | MsG0880043394.01.T01:CDS | 20.0% |
!!! | TATTTTATATCTGAGTTAGA+AGG | + | Chr8:24158707-24158726 | None:intergenic | 20.0% |
!!! | TATTTTCACATTTGGATTTT+GGG | - | Chr8:24158800-24158819 | MsG0880043394.01.T01:CDS | 20.0% |
!!! | TTATTTTCACATTTGGATTT+TGG | - | Chr8:24158799-24158818 | MsG0880043394.01.T01:CDS | 20.0% |
! | AGAGATAATAGAACAAGTTA+AGG | + | Chr8:24158873-24158892 | None:intergenic | 25.0% |
! | ATCAATGAAAATGAATTTGG+TGG | - | Chr8:24158730-24158749 | MsG0880043394.01.T01:CDS | 25.0% |
! | GAGATAATAGAACAAGTTAA+GGG | + | Chr8:24158872-24158891 | None:intergenic | 25.0% |
AAGGGTTAAAAACTGTATTG+TGG | - | Chr8:24158170-24158189 | MsG0880043394.01.T01:CDS | 30.0% | |
AAGTCAAACGACACTATATT+CGG | + | Chr8:24158653-24158672 | None:intergenic | 30.0% | |
AATTTCTTCATACCCAAACA+TGG | - | Chr8:24157938-24157957 | MsG0880043394.01.T01:CDS | 30.0% | |
ATAAAGCAATATCGTCATGT+AGG | + | Chr8:24157811-24157830 | None:intergenic | 30.0% | |
ATAACACCTCGGTAAAAAAT+CGG | + | Chr8:24158581-24158600 | None:intergenic | 30.0% | |
ATAGCCTCAATAGTAATTCT+TGG | - | Chr8:24158528-24158547 | MsG0880043394.01.T01:CDS | 30.0% | |
ATATCTGAGTTAGAAGGTAA+GGG | + | Chr8:24158701-24158720 | None:intergenic | 30.0% | |
ATGTTTGGGTATGAAGAAAT+TGG | + | Chr8:24157939-24157958 | None:intergenic | 30.0% | |
CAAGAATCGTATATTCTTCA+AGG | - | Chr8:24158910-24158929 | MsG0880043394.01.T01:CDS | 30.0% | |
CACCTTAAAATCATCTCTAA+CGG | + | Chr8:24158343-24158362 | None:intergenic | 30.0% | |
GGAGAAATGATCTTAAATTC+CGG | + | Chr8:24158241-24158260 | None:intergenic | 30.0% | |
TATATCTGAGTTAGAAGGTA+AGG | + | Chr8:24158702-24158721 | None:intergenic | 30.0% | |
! | AAACAAGGATGATCCTTTTT+GGG | - | Chr8:24158415-24158434 | MsG0880043394.01.T01:CDS | 30.0% |
! | AATATCCCTCGGATTTTAAA+GGG | - | Chr8:24158376-24158395 | MsG0880043394.01.T01:intron | 30.0% |
! | ATGAATTTGGTGGAGTTAAA+TGG | - | Chr8:24158740-24158759 | MsG0880043394.01.T01:CDS | 30.0% |
! | TGAATTTGGTGGAGTTAAAT+GGG | - | Chr8:24158741-24158760 | MsG0880043394.01.T01:CDS | 30.0% |
! | TGGACTAAATTCTTTGTTGT+CGG | - | Chr8:24158845-24158864 | MsG0880043394.01.T01:CDS | 30.0% |
!! | AAGATTTTGATCAGCTATGT+TGG | - | Chr8:24158947-24158966 | MsG0880043394.01.T01:CDS | 30.0% |
!! | TATGAATGACAATTTTTGGG+AGG | - | Chr8:24158460-24158479 | MsG0880043394.01.T01:CDS | 30.0% |
!!! | ATGATTTTAAGGTGATTCGT+AGG | - | Chr8:24158349-24158368 | MsG0880043394.01.T01:intron | 30.0% |
!!! | TGATTTTAAGGTGATTCGTA+GGG | - | Chr8:24158350-24158369 | MsG0880043394.01.T01:intron | 30.0% |
ATGGGTTTATTTGCCAAACA+AGG | - | Chr8:24158400-24158419 | MsG0880043394.01.T01:intron | 35.0% | |
ATGTCTCTGGTAAACATGAA+TGG | - | Chr8:24158599-24158618 | MsG0880043394.01.T01:CDS | 35.0% | |
CAAAAAGGATCATCCTTGTT+TGG | + | Chr8:24158416-24158435 | None:intergenic | 35.0% | |
GAAATGATCTTAAATTCCGG+TGG | + | Chr8:24158238-24158257 | None:intergenic | 35.0% | |
GAATTTAGTCCATGATTCCT+TGG | + | Chr8:24158837-24158856 | None:intergenic | 35.0% | |
TACAAGGATAGATACGAACA+AGG | - | Chr8:24157763-24157782 | MsG0880043394.01.T01:CDS | 35.0% | |
TCACTTGTGCTCAAAAATCA+TGG | - | Chr8:24157870-24157889 | MsG0880043394.01.T01:CDS | 35.0% | |
TCCTCCAAGAATTACTATTG+AGG | + | Chr8:24158535-24158554 | None:intergenic | 35.0% | |
TGTAAATCAGTCTCCCAAAA+AGG | + | Chr8:24158431-24158450 | None:intergenic | 35.0% | |
! | CAAACAAGGATGATCCTTTT+TGG | - | Chr8:24158414-24158433 | MsG0880043394.01.T01:CDS | 35.0% |
! | CAATATCCCTCGGATTTTAA+AGG | - | Chr8:24158375-24158394 | MsG0880043394.01.T01:intron | 35.0% |
! | CCTTTGTCTCTTCAGATTTT+GGG | - | Chr8:24158112-24158131 | MsG0880043394.01.T01:CDS | 35.0% |
! | CTCCGTTAGAGATGATTTTA+AGG | - | Chr8:24158338-24158357 | MsG0880043394.01.T01:intron | 35.0% |
! | TCCTTTGTCTCTTCAGATTT+TGG | - | Chr8:24158111-24158130 | MsG0880043394.01.T01:CDS | 35.0% |
!! | ACAATTTTTGGGAGGAGAAA+AGG | - | Chr8:24158468-24158487 | MsG0880043394.01.T01:CDS | 35.0% |
!! | ACATGAATGGATTTTGCCAT+TGG | - | Chr8:24158612-24158631 | MsG0880043394.01.T01:CDS | 35.0% |
!! | AGAATAGGGTTAGTCTAGAT+TGG | - | Chr8:24158056-24158075 | MsG0880043394.01.T01:CDS | 35.0% |
!! | ATATCCCTCGGATTTTAAAG+GGG | - | Chr8:24158377-24158396 | MsG0880043394.01.T01:intron | 35.0% |
!! | ATTTGGATTTTGGGTGAACT+CGG | - | Chr8:24158809-24158828 | MsG0880043394.01.T01:CDS | 35.0% |
!! | CCTATTCTAAAACCTTTCAC+CGG | + | Chr8:24158044-24158063 | None:intergenic | 35.0% |
!! | CTTACATCACTTGTTATGAC+AGG | - | Chr8:24158771-24158790 | MsG0880043394.01.T01:CDS | 35.0% |
!!! | CGGTGAAAGGTTTTAGAATA+GGG | - | Chr8:24158042-24158061 | MsG0880043394.01.T01:CDS | 35.0% |
!!! | GGACACCTTATTTTCACATT+TGG | - | Chr8:24158792-24158811 | MsG0880043394.01.T01:CDS | 35.0% |
AAACGGATAAGTTCCTCGTA+TGG | + | Chr8:24158289-24158308 | None:intergenic | 40.0% | |
AAACGTGTGAGGGATTTGAT+AGG | + | Chr8:24157851-24157870 | None:intergenic | 40.0% | |
AATTCTTGGAGGAAACTCGA+TGG | - | Chr8:24158542-24158561 | MsG0880043394.01.T01:CDS | 40.0% | |
AGGCTATATATCTCCCAGAA+AGG | + | Chr8:24158515-24158534 | None:intergenic | 40.0% | |
ATCTTAAATTCCGCTGTAGC+AGG | + | Chr8:24158199-24158218 | None:intergenic | 40.0% | |
ATTATCTCTGCTATCTCAGC+AGG | - | Chr8:24158884-24158903 | MsG0880043394.01.T01:CDS | 40.0% | |
ATTCTTGGAGGAAACTCGAT+GGG | - | Chr8:24158543-24158562 | MsG0880043394.01.T01:CDS | 40.0% | |
CCCAAAATCTGAAGAGACAA+AGG | + | Chr8:24158115-24158134 | None:intergenic | 40.0% | |
CGACACTATATTCGGTTCTT+TGG | + | Chr8:24158645-24158664 | None:intergenic | 40.0% | |
CGGAACATGTTCATGAAAGT+GGG | + | Chr8:24157914-24157933 | None:intergenic | 40.0% | |
GAGGGATTTGATAGGCAATT+TGG | + | Chr8:24157843-24157862 | None:intergenic | 40.0% | |
GATAGGCAATTTGGAGAGAA+TGG | + | Chr8:24157834-24157853 | None:intergenic | 40.0% | |
GCCTCAATAGTAATTCTTGG+AGG | - | Chr8:24158531-24158550 | MsG0880043394.01.T01:CDS | 40.0% | |
GGAACATGTTCATGAAAGTG+GGG | + | Chr8:24157913-24157932 | None:intergenic | 40.0% | |
GGCTATATATCTCCCAGAAA+GGG | + | Chr8:24158514-24158533 | None:intergenic | 40.0% | |
TCACTGTCATGCTCTTGAAT+TGG | + | Chr8:24158088-24158107 | None:intergenic | 40.0% | |
TCTTAAATTCCGCTGTAGCA+GGG | + | Chr8:24158198-24158217 | None:intergenic | 40.0% | |
TGATCTTAAATTCCGGTGGA+AGG | + | Chr8:24158234-24158253 | None:intergenic | 40.0% | |
TGGGTATGAAGAAATTGGTG+CGG | + | Chr8:24157934-24157953 | None:intergenic | 40.0% | |
TTACCAGAGACATAACACCT+CGG | + | Chr8:24158592-24158611 | None:intergenic | 40.0% | |
TTATCTCTGCTATCTCAGCA+GGG | - | Chr8:24158885-24158904 | MsG0880043394.01.T01:CDS | 40.0% | |
TTGGGTTCTGCTAGTGTTAA+TGG | - | Chr8:24158130-24158149 | MsG0880043394.01.T01:CDS | 40.0% | |
!! | GAATGGATTTTGCCATTGGT+TGG | - | Chr8:24158616-24158635 | MsG0880043394.01.T01:CDS | 40.0% |
!!! | CCGGTGAAAGGTTTTAGAAT+AGG | - | Chr8:24158041-24158060 | MsG0880043394.01.T01:CDS | 40.0% |
!!! | GATATGCCGATTTTTTACCG+AGG | - | Chr8:24158572-24158591 | MsG0880043394.01.T01:CDS | 40.0% |
AATTCCGGTGGAAGGTTAAG+AGG | + | Chr8:24158226-24158245 | None:intergenic | 45.0% | |
AGCACAAGTGAAACGTGTGA+GGG | + | Chr8:24157861-24157880 | None:intergenic | 45.0% | |
ATACGAGCTTCAACCATACG+AGG | - | Chr8:24158273-24158292 | MsG0880043394.01.T01:CDS | 45.0% | |
CAAGCTGTATGACCCTTTCT+GGG | - | Chr8:24158499-24158518 | MsG0880043394.01.T01:CDS | 45.0% | |
CTGTCATGCTCTTGAATTGG+AGG | + | Chr8:24158085-24158104 | None:intergenic | 45.0% | |
CTTTCACCGGAAATAACGCA+CGG | + | Chr8:24158031-24158050 | None:intergenic | 45.0% | |
GCGCTGTTTGTCTCTTCAAA+GGG | - | Chr8:24158152-24158171 | MsG0880043394.01.T01:CDS | 45.0% | |
GCGGAACATGTTCATGAAAG+TGG | + | Chr8:24157915-24157934 | None:intergenic | 45.0% | |
GTTGAAGCTCGTATGGTTCA+AGG | + | Chr8:24158267-24158286 | None:intergenic | 45.0% | |
TCAAGCTGTATGACCCTTTC+TGG | - | Chr8:24158498-24158517 | MsG0880043394.01.T01:CDS | 45.0% | |
TCATGCTCTTGAATTGGAGG+TGG | + | Chr8:24158082-24158101 | None:intergenic | 45.0% | |
TCCTGCTAAAGGAAGAGACA+GGG | - | Chr8:24157984-24158003 | MsG0880043394.01.T01:CDS | 45.0% | |
TCGTAGGGTTCAATATCCCT+CGG | - | Chr8:24158365-24158384 | MsG0880043394.01.T01:intron | 45.0% | |
TCGTATGGTTGAAGCTCGTA+TGG | + | Chr8:24158274-24158293 | None:intergenic | 45.0% | |
TCTCTTCCTTTAGCAGGAGA+CGG | + | Chr8:24157982-24158001 | None:intergenic | 45.0% | |
TTCTTGGAGGAAACTCGATG+GGG | - | Chr8:24158544-24158563 | MsG0880043394.01.T01:CDS | 45.0% | |
TTTCACCGGAAATAACGCAC+GGG | + | Chr8:24158030-24158049 | None:intergenic | 45.0% | |
! | GAATACCCGTGCGTTATTTC+CGG | - | Chr8:24158022-24158041 | MsG0880043394.01.T01:CDS | 45.0% |
! | TTACCGAGGTGTTATGTCTC+TGG | - | Chr8:24158586-24158605 | MsG0880043394.01.T01:CDS | 45.0% |
!! | CCATCCCCTTTAAAATCCGA+GGG | + | Chr8:24158384-24158403 | None:intergenic | 45.0% |
!! | CCTCGGATTTTAAAGGGGAT+GGG | - | Chr8:24158382-24158401 | MsG0880043394.01.T01:intron | 45.0% |
!! | TGGATTTTGCCATTGGTTGG+CGG | - | Chr8:24158619-24158638 | MsG0880043394.01.T01:CDS | 45.0% |
ACCCTGTCTCTTCCTTTAGC+AGG | + | Chr8:24157988-24158007 | None:intergenic | 50.0% | |
AGCTCGTATGGTTCAAGGCT+AGG | + | Chr8:24158262-24158281 | None:intergenic | 50.0% | |
ATAACGCACGGGTATTCCTG+CGG | + | Chr8:24158019-24158038 | None:intergenic | 50.0% | |
ATTGTGGAACCCTGCTACAG+CGG | - | Chr8:24158186-24158205 | MsG0880043394.01.T01:CDS | 50.0% | |
CAATCTCCACCTCGTGGATT+CGG | - | Chr8:24158309-24158328 | MsG0880043394.01.T01:intron | 50.0% | |
CCACGAGGTGGAGATTGAAA+CGG | + | Chr8:24158306-24158325 | None:intergenic | 50.0% | |
CGTTCCTCTTAACCTTCCAC+CGG | - | Chr8:24158219-24158238 | MsG0880043394.01.T01:CDS | 50.0% | |
CTCCTGCTAAAGGAAGAGAC+AGG | - | Chr8:24157983-24158002 | MsG0880043394.01.T01:CDS | 50.0% | |
CTCTTCCTTTAGCAGGAGAC+GGG | + | Chr8:24157981-24158000 | None:intergenic | 50.0% | |
CTTCATACCCAAACATGGCG+AGG | - | Chr8:24157943-24157962 | MsG0880043394.01.T01:CDS | 50.0% | |
GAGCACAAGTGAAACGTGTG+AGG | + | Chr8:24157862-24157881 | None:intergenic | 50.0% | |
GAGTCATAACCGAATCCACG+AGG | + | Chr8:24158321-24158340 | None:intergenic | 50.0% | |
GGCGCTGTTTGTCTCTTCAA+AGG | - | Chr8:24158151-24158170 | MsG0880043394.01.T01:CDS | 50.0% | |
TCATAACCGAATCCACGAGG+TGG | + | Chr8:24158318-24158337 | None:intergenic | 50.0% | |
! | CGTGCGTTATTTCCGGTGAA+AGG | - | Chr8:24158029-24158048 | MsG0880043394.01.T01:CDS | 50.0% |
!! | AACTCGGTGCCAAGGAATCA+TGG | - | Chr8:24158825-24158844 | MsG0880043394.01.T01:CDS | 50.0% |
!! | CCCATCCCCTTTAAAATCCG+AGG | + | Chr8:24158385-24158404 | None:intergenic | 50.0% |
!! | CCCTCGGATTTTAAAGGGGA+TGG | - | Chr8:24158381-24158400 | MsG0880043394.01.T01:intron | 50.0% |
ATCATCGGCCTCGCCATGTT+TGG | + | Chr8:24157954-24157973 | None:intergenic | 55.0% | |
CAGGAGACGGGTGGAATCAT+CGG | + | Chr8:24157969-24157988 | None:intergenic | 55.0% | |
CCGTTTCAATCTCCACCTCG+TGG | - | Chr8:24158303-24158322 | MsG0880043394.01.T01:intron | 55.0% | |
GTTCTTTGGCCGCCAACCAA+TGG | + | Chr8:24158631-24158650 | None:intergenic | 55.0% | |
TAACGCACGGGTATTCCTGC+GGG | + | Chr8:24158018-24158037 | None:intergenic | 55.0% | |
TCATCGGCCTCGCCATGTTT+GGG | + | Chr8:24157953-24157972 | None:intergenic | 55.0% | |
TTCCACCCGTCTCCTGCTAA+AGG | - | Chr8:24157973-24157992 | MsG0880043394.01.T01:CDS | 55.0% | |
TTCCTTTAGCAGGAGACGGG+TGG | + | Chr8:24157978-24157997 | None:intergenic | 55.0% | |
!! | TTTGGGTGAACTCGGTGCCA+AGG | - | Chr8:24158817-24158836 | MsG0880043394.01.T01:CDS | 55.0% |
AACGCACGGGTATTCCTGCG+GGG | + | Chr8:24158017-24158036 | None:intergenic | 60.0% | |
! | GACAGGGTGTTATACCCCGC+AGG | - | Chr8:24158000-24158019 | MsG0880043394.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 24157752 | 24158979 | 24157752 | ID=MsG0880043394.01;Name=MsG0880043394.01 |
Chr8 | mRNA | 24157752 | 24158979 | 24157752 | ID=MsG0880043394.01.T01;Parent=MsG0880043394.01;Name=MsG0880043394.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|1|1|3|0|359 |
Chr8 | exon | 24158726 | 24158979 | 24158726 | ID=MsG0880043394.01.T01:exon:8879;Parent=MsG0880043394.01.T01 |
Chr8 | exon | 24158401 | 24158668 | 24158401 | ID=MsG0880043394.01.T01:exon:8878;Parent=MsG0880043394.01.T01 |
Chr8 | exon | 24157752 | 24158309 | 24157752 | ID=MsG0880043394.01.T01:exon:8877;Parent=MsG0880043394.01.T01 |
Chr8 | CDS | 24158726 | 24158979 | 24158726 | ID=MsG0880043394.01.T01:cds;Parent=MsG0880043394.01.T01 |
Chr8 | CDS | 24158401 | 24158668 | 24158401 | ID=MsG0880043394.01.T01:cds;Parent=MsG0880043394.01.T01 |
Chr8 | CDS | 24157752 | 24158309 | 24157752 | ID=MsG0880043394.01.T01:cds;Parent=MsG0880043394.01.T01 |
Gene Sequence |
Protein sequence |