AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034143.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034143.01.T01 MTR_6g086825 46.696 454 157 9 2 370 4 457 1.20e-119 354
MsG0680034143.01.T01 MTR_4g028660 52.020 396 110 13 54 371 4 397 3.95e-115 340
MsG0680034143.01.T01 MTR_4g027450 52.020 396 110 13 54 371 4 397 3.95e-115 340
MsG0680034143.01.T01 MTR_4g028680 50.773 388 114 10 54 364 4 391 1.49e-109 326
MsG0680034143.01.T01 MTR_4g028510 65.401 237 71 5 135 364 161 393 2.96e-101 307
MsG0680034143.01.T01 MTR_4g028510 62.500 88 28 2 54 136 4 91 1.29e-22 99.0
MsG0680034143.01.T01 MTR_6g079810 64.344 244 72 5 135 364 212 454 2.36e-100 305
MsG0680034143.01.T01 MTR_6g079810 57.937 126 43 2 14 137 26 143 3.33e-32 126
MsG0680034143.01.T01 MTR_6g478230 45.278 413 141 12 32 370 3 404 1.57e-99 301
MsG0680034143.01.T01 MTR_6g090180 45.139 432 146 13 24 371 12 436 2.66e-98 299
MsG0680034143.01.T01 MTR_0054s0100 62.656 241 78 4 140 370 167 405 9.81e-98 296
MsG0680034143.01.T01 MTR_0054s0100 61.111 90 27 4 54 137 6 93 1.09e-20 93.2
MsG0680034143.01.T01 MTR_0054s0090 63.071 241 77 4 140 370 165 403 2.47e-97 295
MsG0680034143.01.T01 MTR_0054s0090 61.111 90 27 4 54 137 6 93 1.11e-20 93.2
MsG0680034143.01.T01 MTR_6g080680 62.821 234 72 4 135 364 164 386 1.62e-93 285
MsG0680034143.01.T01 MTR_6g080680 50.476 105 31 3 55 154 8 96 1.50e-18 86.7
MsG0680034143.01.T01 MTR_0134s0060 59.756 246 82 5 135 363 157 402 8.26e-93 284
MsG0680034143.01.T01 MTR_0134s0060 65.517 87 24 3 56 137 3 88 3.96e-24 103
MsG0680034143.01.T01 MTR_4g130330 63.248 234 73 5 140 364 153 382 3.01e-91 279
MsG0680034143.01.T01 MTR_4g130330 56.098 82 34 1 62 143 3 82 2.80e-19 89.0
MsG0680034143.01.T01 MTR_6g079770 59.350 246 83 4 136 364 163 408 1.42e-88 273
MsG0680034143.01.T01 MTR_6g079770 52.586 116 38 5 56 156 8 121 3.91e-22 97.4
MsG0680034143.01.T01 MTR_4g028750 60.714 224 79 5 140 358 164 383 6.21e-84 261
MsG0680034143.01.T01 MTR_4g028750 51.724 116 42 2 55 156 5 120 4.93e-26 108
MsG0680034143.01.T01 MTR_6g078010 59.375 224 67 5 148 364 120 326 5.17e-83 256
MsG0680034143.01.T01 MTR_6g079790 56.356 236 86 4 151 369 73 308 5.71e-79 245
MsG0680034143.01.T01 MTR_6g090250 55.144 243 86 4 152 371 180 422 1.21e-78 248
MsG0680034143.01.T01 MTR_6g090250 60.938 64 19 2 84 143 29 90 7.71e-14 72.8
MsG0680034143.01.T01 MTR_7g023800 48.077 312 114 12 105 371 1 309 1.12e-76 239
MsG0680034143.01.T01 MTR_6g090260 62.105 190 64 4 190 371 73 262 4.36e-75 233
MsG0680034143.01.T01 MTR_6g090260 68.254 63 20 0 53 115 7 69 1.81e-21 92.8
MsG0680034143.01.T01 MTR_6g087620 58.482 224 54 6 151 363 84 279 8.13e-75 233
MsG0680034143.01.T01 MTR_0831s0010 38.313 415 171 14 30 371 20 422 1.37e-71 229
MsG0680034143.01.T01 MTR_8g063440 38.583 381 159 11 55 366 2 376 3.99e-71 227
MsG0680034143.01.T01 MTR_8g012090 41.860 344 137 11 51 342 2 334 2.77e-70 223
MsG0680034143.01.T01 MTR_2g038680 38.821 407 144 13 54 364 5 402 6.47e-69 222
MsG0680034143.01.T01 MTR_7g104710 50.000 282 89 12 56 288 8 286 1.03e-68 219
MsG0680034143.01.T01 MTR_5g097220 51.250 240 94 6 152 371 170 406 8.90e-67 217
MsG0680034143.01.T01 MTR_5g097220 48.889 90 39 4 59 146 7 91 2.82e-14 73.9
MsG0680034143.01.T01 MTR_5g092860 41.520 342 120 11 84 353 20 353 3.90e-65 211
MsG0680034143.01.T01 MTR_5g043605 39.031 351 166 12 37 364 5 330 1.44e-64 210
MsG0680034143.01.T01 MTR_0129s0070 51.770 226 99 4 148 364 163 387 2.28e-64 210
MsG0680034143.01.T01 MTR_0129s0070 50.000 78 38 1 51 128 3 79 9.93e-15 75.5
MsG0680034143.01.T01 MTR_0129s0120 50.847 236 100 6 148 371 163 394 3.78e-64 209
MsG0680034143.01.T01 MTR_0129s0120 54.930 71 30 2 55 124 7 76 5.41e-13 70.1
MsG0680034143.01.T01 MTR_5g091140 40.845 355 145 13 56 347 38 390 2.08e-63 208
MsG0680034143.01.T01 MTR_4g014370 38.806 335 172 8 56 370 13 334 2.53e-63 206
MsG0680034143.01.T01 MTR_2g104340 38.010 392 153 14 55 364 4 387 1.37e-62 206
MsG0680034143.01.T01 MTR_2g066170 37.895 380 162 11 55 364 2 377 7.40e-62 203
MsG0680034143.01.T01 MTR_4g007940 48.214 224 91 5 147 351 103 320 5.81e-60 197
MsG0680034143.01.T01 MTR_5g097330 50.224 223 107 3 152 370 178 400 1.30e-59 198
MsG0680034143.01.T01 MTR_5g097330 40.179 112 57 4 56 160 7 115 2.96e-12 67.8
MsG0680034143.01.T01 MTR_4g117550 37.150 393 143 12 53 369 5 369 1.52e-59 197
MsG0680034143.01.T01 MTR_1g098180 37.802 373 150 12 54 364 5 357 1.63e-59 197
MsG0680034143.01.T01 MTR_2g064950 37.371 388 157 16 60 368 5 385 8.32e-59 196
MsG0680034143.01.T01 MTR_6g461660 50.220 227 102 5 146 366 172 393 1.11e-58 196
MsG0680034143.01.T01 MTR_6g461660 55.294 85 35 2 56 138 10 93 9.84e-15 75.5
MsG0680034143.01.T01 MTR_8g464770 38.032 376 161 12 60 369 7 376 1.58e-58 194
MsG0680034143.01.T01 MTR_2g021800 46.639 238 106 7 151 369 177 412 6.33e-58 194
MsG0680034143.01.T01 MTR_2g021800 53.030 66 29 2 54 119 6 69 8.00e-14 72.8
MsG0680034143.01.T01 MTR_5g076490 52.402 229 94 6 152 366 102 329 1.28e-57 191
MsG0680034143.01.T01 MTR_2g022000 44.770 239 111 6 151 370 176 412 1.81e-57 193
MsG0680034143.01.T01 MTR_2g022000 52.055 73 32 2 54 124 5 76 8.52e-16 79.0
MsG0680034143.01.T01 MTR_2g021950 47.748 222 102 7 153 364 171 388 9.86e-57 190
MsG0680034143.01.T01 MTR_2g021950 42.045 88 45 2 56 137 6 93 1.21e-13 72.0
MsG0680034143.01.T01 MTR_5g064700 49.351 231 94 8 151 364 135 359 1.47e-56 189
MsG0680034143.01.T01 MTR_5g074850 37.306 386 148 14 53 350 22 401 2.10e-56 198
MsG0680034143.01.T01 MTR_5g092850 49.565 230 96 8 152 364 167 393 9.52e-56 188
MsG0680034143.01.T01 MTR_5g092850 53.968 63 29 0 61 123 11 73 1.23e-14 75.1
MsG0680034143.01.T01 MTR_2g065860 36.126 382 170 10 55 365 2 380 2.27e-55 186
MsG0680034143.01.T01 MTR_2g021920 46.320 231 102 7 153 364 37 264 2.44e-55 183
MsG0680034143.01.T01 MTR_5g037680 47.982 223 93 5 151 364 169 377 2.51e-55 188
MsG0680034143.01.T01 MTR_5g037680 51.282 78 36 1 59 134 1 78 1.30e-15 78.2
MsG0680034143.01.T01 MTR_7g079640 38.798 366 161 14 65 371 12 373 1.32e-54 184
MsG0680034143.01.T01 MTR_3g011120 46.364 220 108 5 145 362 158 369 2.03e-54 183
MsG0680034143.01.T01 MTR_3g011120 59.701 67 25 1 60 124 8 74 2.12e-16 80.1
MsG0680034143.01.T01 MTR_2g034700 47.500 240 103 7 137 371 153 374 4.52e-54 182
MsG0680034143.01.T01 MTR_2g034700 57.895 76 28 1 53 124 1 76 2.96e-17 82.8
MsG0680034143.01.T01 MTR_8g036970 40.065 307 153 10 70 351 2 302 7.57e-54 182
MsG0680034143.01.T01 MTR_8g467670 43.777 233 117 5 135 366 153 372 1.22e-53 182
MsG0680034143.01.T01 MTR_8g467670 57.143 56 24 0 60 115 8 63 2.59e-12 68.2
MsG0680034143.01.T01 MTR_5g097680 46.032 252 112 8 126 364 178 418 2.28e-53 182
MsG0680034143.01.T01 MTR_5g097680 59.155 71 26 2 55 123 7 76 3.53e-15 77.0
MsG0680034143.01.T01 MTR_5g097350 46.667 225 107 7 149 371 172 385 3.55e-53 181
MsG0680034143.01.T01 MTR_0129s0050 44.726 237 106 6 152 364 164 399 3.71e-53 181
MsG0680034143.01.T01 MTR_0129s0050 51.724 87 36 3 55 137 4 88 1.33e-14 75.1
MsG0680034143.01.T01 MTR_5g069390 48.636 220 100 7 154 364 193 408 5.11e-53 183
MsG0680034143.01.T01 MTR_5g069390 37.500 120 60 4 31 148 1 107 1.28e-15 78.6
MsG0680034143.01.T01 MTR_7g017130 46.789 218 108 3 153 364 173 388 5.35e-53 181
MsG0680034143.01.T01 MTR_7g017130 52.174 69 31 1 56 122 8 76 1.87e-13 71.6
MsG0680034143.01.T01 MTR_6g004450 46.725 229 102 7 152 370 48 266 6.85e-53 176
MsG0680034143.01.T01 MTR_6g079730 62.585 147 50 2 230 371 2 148 8.45e-53 172
MsG0680034143.01.T01 MTR_1g007450 49.309 217 94 7 152 354 163 377 9.20e-53 181
MsG0680034143.01.T01 MTR_1g007450 37.143 105 53 2 55 159 2 93 2.18e-13 71.2
MsG0680034143.01.T01 MTR_3g018750 44.872 234 105 8 152 364 2 232 1.15e-52 175
MsG0680034143.01.T01 MTR_4g102410 47.210 233 109 7 147 366 212 443 8.42e-52 179
MsG0680034143.01.T01 MTR_4g102410 37.931 116 65 3 50 159 46 160 6.53e-15 76.3
MsG0680034143.01.T01 MTR_7g069550 48.085 235 99 10 149 367 166 393 2.21e-51 176
MsG0680034143.01.T01 MTR_7g069550 51.389 72 32 2 60 129 9 79 8.77e-14 72.4
MsG0680034143.01.T01 MTR_4g014370 41.739 230 122 4 146 370 184 406 5.26e-51 176
MsG0680034143.01.T01 MTR_4g014370 60.317 63 23 2 56 117 2 63 6.93e-14 72.8
MsG0680034143.01.T01 MTR_7g017170 48.020 202 97 3 153 348 173 372 3.24e-50 174
MsG0680034143.01.T01 MTR_7g017170 52.174 69 31 1 56 122 8 76 1.66e-13 71.6
MsG0680034143.01.T01 MTR_2g066150 35.696 381 143 13 55 364 2 351 3.24e-50 172
MsG0680034143.01.T01 MTR_8g064890 44.643 224 109 7 152 369 170 384 3.48e-50 173
MsG0680034143.01.T01 MTR_8g064890 59.677 62 25 0 54 115 4 65 7.45e-15 75.5
MsG0680034143.01.T01 MTR_5g075370 35.000 380 156 13 59 350 1 377 2.47e-49 177
MsG0680034143.01.T01 MTR_2g065840 45.455 231 104 9 143 364 163 380 3.25e-49 170
MsG0680034143.01.T01 MTR_2g065840 52.703 74 32 2 55 126 2 74 3.13e-13 70.9
MsG0680034143.01.T01 MTR_5g074800 47.210 233 100 11 152 367 112 338 4.73e-49 169
MsG0680034143.01.T01 MTR_2g104280 46.121 232 104 9 152 364 167 396 6.24e-49 170
MsG0680034143.01.T01 MTR_8g063350 34.302 344 175 13 60 365 8 338 1.03e-48 168
MsG0680034143.01.T01 MTR_5g068490 46.759 216 96 6 153 366 72 270 1.20e-48 166
MsG0680034143.01.T01 MTR_2g066200 43.805 226 115 5 146 364 159 379 1.30e-48 169
MsG0680034143.01.T01 MTR_2g066200 53.488 86 35 3 55 136 2 86 5.23e-16 79.0
MsG0680034143.01.T01 MTR_5g023970 50.000 184 87 3 186 365 5 187 2.23e-48 162
MsG0680034143.01.T01 MTR_5g059430 45.415 229 109 6 154 370 199 423 3.06e-48 169
MsG0680034143.01.T01 MTR_5g059430 52.632 76 32 2 54 125 12 87 2.39e-16 80.5
MsG0680034143.01.T01 MTR_8g041270 43.162 234 112 7 152 366 168 399 7.74e-48 167
MsG0680034143.01.T01 MTR_5g097850 55.215 163 60 3 197 349 63 222 1.57e-47 162
MsG0680034143.01.T01 MTR_5g022850 35.942 345 177 11 58 364 6 344 3.54e-47 164
MsG0680034143.01.T01 MTR_2g021770 44.156 231 105 8 154 364 172 398 5.10e-47 165
MsG0680034143.01.T01 MTR_2g021770 51.613 62 27 1 66 124 12 73 1.68e-12 68.6
MsG0680034143.01.T01 MTR_5g096630 42.387 243 121 6 147 370 169 411 9.26e-47 164
MsG0680034143.01.T01 MTR_5g096630 50.769 65 30 1 66 128 18 82 1.81e-12 68.6
MsG0680034143.01.T01 MTR_7g111700 35.185 378 140 12 63 366 12 358 1.11e-46 163
MsG0680034143.01.T01 MTR_5g096910 47.980 198 93 5 153 349 180 368 2.04e-46 163
MsG0680034143.01.T01 MTR_5g096910 61.404 57 22 0 52 108 3 59 8.62e-17 81.6
MsG0680034143.01.T01 MTR_4g055820 46.500 200 80 5 152 329 165 359 2.46e-46 162
MsG0680034143.01.T01 MTR_4g055820 61.194 67 23 2 60 124 9 74 2.44e-17 82.8
MsG0680034143.01.T01 MTR_7g016930 38.127 299 130 9 58 304 9 304 4.80e-46 160
MsG0680034143.01.T01 MTR_4g016000 49.457 184 76 5 147 326 23 193 1.63e-45 155
MsG0680034143.01.T01 MTR_5g086590 45.361 194 94 6 156 345 46 231 4.75e-45 155
MsG0680034143.01.T01 MTR_1g007410 43.933 239 116 10 146 370 169 403 1.21e-44 159
MsG0680034143.01.T01 MTR_1g007410 51.389 72 32 2 56 125 13 83 9.73e-13 69.3
MsG0680034143.01.T01 MTR_6g009350 45.833 192 96 5 151 336 6 195 7.26e-44 150
MsG0680034143.01.T01 MTR_7g017040 42.241 232 118 4 153 371 168 396 1.47e-43 155
MsG0680034143.01.T01 MTR_7g017040 50.000 88 40 3 53 137 4 90 2.73e-13 70.9
MsG0680034143.01.T01 MTR_1g050312 43.556 225 97 7 145 362 83 284 1.34e-42 150
MsG0680034143.01.T01 MTR_5g024260 41.702 235 110 9 135 353 163 386 1.40e-42 153
MsG0680034143.01.T01 MTR_5g024260 56.164 73 30 1 54 124 10 82 1.57e-16 80.9
MsG0680034143.01.T01 MTR_8g046310 43.578 218 103 8 153 364 166 369 3.41e-42 151
MsG0680034143.01.T01 MTR_8g046310 53.521 71 31 1 53 121 1 71 2.66e-15 77.0
MsG0680034143.01.T01 MTR_8g035690 42.510 247 103 9 150 364 55 294 3.50e-41 147
MsG0680034143.01.T01 MTR_1g007430 47.120 191 77 5 152 331 147 324 4.75e-40 144
MsG0680034143.01.T01 MTR_8g063330 45.408 196 84 7 147 328 162 348 6.89e-40 147
MsG0680034143.01.T01 MTR_8g063330 62.712 59 21 1 55 112 2 60 1.88e-14 74.7
MsG0680034143.01.T01 MTR_8g063370 41.743 218 115 9 152 364 173 383 8.66e-40 145
MsG0680034143.01.T01 MTR_8g046220 39.095 243 112 5 153 364 160 397 1.01e-39 145
MsG0680034143.01.T01 MTR_8g046220 50.685 73 31 1 47 119 3 70 3.40e-14 73.9
MsG0680034143.01.T01 MTR_5g066420 47.651 149 70 2 222 362 1 149 2.79e-39 137
MsG0680034143.01.T01 MTR_7g019250 39.382 259 127 9 100 349 175 412 3.38e-39 145
MsG0680034143.01.T01 MTR_8g033140 39.184 245 105 7 154 364 175 409 5.80e-39 144
MsG0680034143.01.T01 MTR_8g033140 62.000 50 19 0 62 111 15 64 3.13e-13 70.9
MsG0680034143.01.T01 MTR_8g033000 45.455 187 86 3 191 366 175 356 2.36e-38 141
MsG0680034143.01.T01 MTR_1g053510 35.968 253 127 6 140 366 156 399 4.33e-38 141
MsG0680034143.01.T01 MTR_1g053510 44.681 94 49 1 52 142 1 94 1.93e-13 71.6
MsG0680034143.01.T01 MTR_8g039500 44.279 201 98 8 149 342 153 346 4.63e-38 140
MsG0680034143.01.T01 MTR_8g039500 56.338 71 28 2 55 123 2 71 1.24e-15 77.8
MsG0680034143.01.T01 MTR_8g046200 39.431 246 110 8 153 364 173 413 2.91e-37 139
MsG0680034143.01.T01 MTR_7g017120 45.503 189 93 6 183 363 70 256 5.11e-37 135
MsG0680034143.01.T01 MTR_7g017150 45.789 190 92 6 183 363 70 257 8.65e-37 134
MsG0680034143.01.T01 MTR_5g094350 38.662 269 89 11 64 260 11 275 2.11e-36 134
MsG0680034143.01.T01 MTR_3g030620 43.293 164 81 5 213 366 14 175 2.21e-36 130
MsG0680034143.01.T01 MTR_5g097540 38.333 240 130 8 103 331 1 233 2.27e-36 134
MsG0680034143.01.T01 MTR_5g096900 34.603 315 130 10 55 296 2 313 4.86e-36 134
MsG0680034143.01.T01 MTR_8g032980 38.976 254 108 7 153 364 164 412 6.75e-36 135
MsG0680034143.01.T01 MTR_8g032980 48.000 75 35 2 53 123 1 75 1.06e-11 66.2
MsG0680034143.01.T01 MTR_5g098950 42.308 182 80 2 150 331 118 274 7.69e-36 132
MsG0680034143.01.T01 MTR_4g094400 61.321 106 24 3 218 306 6 111 2.22e-35 126
MsG0680034143.01.T01 MTR_8g013000 40.845 213 105 7 152 350 164 369 3.52e-34 130
MsG0680034143.01.T01 MTR_8g013000 48.649 74 35 2 60 131 5 77 6.95e-14 72.8
MsG0680034143.01.T01 MTR_5g072060 43.779 217 77 9 152 348 156 347 3.64e-34 133
MsG0680034143.01.T01 MTR_5g072060 41.414 99 52 3 65 159 5 101 8.15e-14 73.2
MsG0680034143.01.T01 MTR_7g101200 35.714 266 118 12 80 330 1 228 1.16e-33 125
MsG0680034143.01.T01 MTR_8g063310 37.288 236 127 7 152 371 165 395 1.39e-33 129
MsG0680034143.01.T01 MTR_8g018110 34.400 250 109 6 154 370 167 394 3.10e-32 125
MsG0680034143.01.T01 MTR_8g018110 56.667 60 26 0 53 112 1 60 5.01e-13 70.1
MsG0680034143.01.T01 MTR_5g096920 44.138 145 77 3 222 364 1 143 1.18e-30 114
MsG0680034143.01.T01 MTR_8g033090 36.800 250 117 9 154 370 168 409 3.32e-30 120
MsG0680034143.01.T01 MTR_8g033090 45.652 92 48 1 53 142 1 92 4.06e-15 76.6
MsG0680034143.01.T01 MTR_1g115205 35.565 239 102 6 40 230 3 237 1.72e-29 114
MsG0680034143.01.T01 MTR_8g033110 35.827 254 117 11 154 370 168 412 2.01e-28 115
MsG0680034143.01.T01 MTR_8g033110 44.565 92 49 1 53 142 1 92 2.57e-14 74.3
MsG0680034143.01.T01 MTR_5g097660 54.808 104 46 1 268 370 14 117 6.75e-28 106
MsG0680034143.01.T01 MTR_8g064790 33.028 218 96 4 152 369 166 333 1.46e-27 111
MsG0680034143.01.T01 MTR_8g064790 61.290 62 23 1 54 115 4 64 2.78e-15 76.6
MsG0680034143.01.T01 MTR_2g022020 51.376 109 51 1 258 366 7 113 1.79e-27 105
MsG0680034143.01.T01 MTR_6g465360 62.887 97 30 3 46 137 43 138 4.38e-27 108
MsG0680034143.01.T01 MTR_6g087660 69.863 73 18 1 55 123 7 79 1.89e-26 104
MsG0680034143.01.T01 MTR_5g036250 52.381 105 46 2 269 370 8 111 2.01e-25 101
MsG0680034143.01.T01 MTR_5g086780 47.170 106 53 1 247 349 123 228 9.65e-24 98.6
MsG0680034143.01.T01 MTR_5g086780 44.538 119 59 2 57 175 8 119 1.63e-21 92.4
MsG0680034143.01.T01 MTR_6g070880 63.291 79 25 1 63 137 29 107 1.71e-23 98.6
MsG0680034143.01.T01 MTR_6g070880 47.059 85 38 1 135 212 175 259 1.68e-13 70.5
MsG0680034143.01.T01 MTR_6g071420 63.291 79 25 1 63 137 29 107 1.71e-23 98.6
MsG0680034143.01.T01 MTR_6g071420 47.059 85 38 1 135 212 175 259 1.68e-13 70.5
MsG0680034143.01.T01 MTR_1g050308 53.333 105 42 3 266 366 239 340 3.08e-22 96.7
MsG0680034143.01.T01 MTR_1g050308 32.906 234 85 8 41 209 10 236 2.71e-21 94.0
MsG0680034143.01.T01 MTR_3g019290 39.205 176 66 7 60 198 7 178 1.10e-21 91.7
MsG0680034143.01.T01 MTR_5g096050 48.182 110 39 4 222 315 1 108 2.44e-20 85.9
MsG0680034143.01.T01 MTR_1g050305 55.422 83 32 2 274 351 21 103 5.38e-18 80.5
MsG0680034143.01.T01 MTR_8g073570 51.282 78 38 0 65 142 9 86 7.22e-17 77.8
MsG0680034143.01.T01 MTR_2g104260 42.857 112 52 5 152 252 167 277 9.29e-17 80.1
MsG0680034143.01.T01 MTR_5g097650 49.351 77 37 1 52 126 8 84 1.77e-16 76.6
MsG0680034143.01.T01 MTR_8g041440 53.425 73 31 2 53 123 3 74 7.18e-16 73.6
MsG0680034143.01.T01 MTR_5g096070 50.000 74 29 2 50 123 11 76 1.25e-15 74.3
MsG0680034143.01.T01 MTR_3g047540 48.780 82 39 2 191 272 5 83 4.55e-15 70.5
MsG0680034143.01.T01 MTR_4g023130 23.602 322 206 10 65 369 8 306 4.59e-15 75.5
MsG0680034143.01.T01 MTR_1g076810 47.423 97 43 4 53 144 6 99 1.79e-14 75.1
MsG0680034143.01.T01 MTR_3g097190 55.357 56 25 0 293 348 28 83 2.36e-14 71.2
MsG0680034143.01.T01 MTR_5g097820 44.944 89 43 2 155 243 186 268 2.66e-14 72.8
MsG0680034143.01.T01 MTR_5g097820 48.148 81 38 3 52 129 8 87 3.10e-14 72.4
MsG0680034143.01.T01 MTR_5g048160 25.517 290 165 12 109 370 123 389 3.32e-14 73.6
MsG0680034143.01.T01 MTR_2g021050 25.788 349 185 17 66 354 5 339 5.89e-14 72.8
MsG0680034143.01.T01 MTR_4g133170 27.778 216 134 10 151 356 141 344 6.14e-14 72.8
MsG0680034143.01.T01 MTR_3g047580 50.000 68 32 1 60 125 8 75 7.81e-14 68.2
MsG0680034143.01.T01 MTR_5g091150 46.667 90 42 3 192 279 99 184 1.99e-13 68.9
MsG0680034143.01.T01 MTR_2g426070 30.435 207 122 9 152 348 165 359 3.85e-13 70.5
MsG0680034143.01.T01 MTR_2g025960 28.755 233 134 13 151 366 67 284 4.78e-13 69.7
MsG0680034143.01.T01 MTR_0115s0020 27.341 267 146 12 131 370 151 396 1.13e-12 68.9
MsG0680034143.01.T01 MTR_1g097330 26.014 296 152 13 66 308 16 297 1.32e-12 68.9
MsG0680034143.01.T01 MTR_8g433030 25.564 266 166 10 54 308 29 273 5.14e-12 66.6
MsG0680034143.01.T01 MTR_2g031720 25.000 360 183 15 61 348 1 345 5.57e-12 67.0
MsG0680034143.01.T01 MTR_8g090195 48.214 56 29 0 292 347 58 113 1.36e-11 61.6
MsG0680034143.01.T01 MTR_5g094360 42.169 83 43 3 153 231 62 143 1.43e-11 62.4
MsG0680034143.01.T01 MTR_2g024100 27.556 225 126 10 149 348 151 363 1.71e-11 65.5
MsG0680034143.01.T01 MTR_0667s0010 27.632 228 121 11 152 353 152 361 1.93e-11 65.5
MsG0680034143.01.T01 MTR_2g021155 25.000 252 144 11 66 308 671 886 3.22e-11 65.5
MsG0680034143.01.T01 MTR_2g031640 30.233 215 120 11 152 348 139 341 4.07e-11 64.3
MsG0680034143.01.T01 MTR_2g031680 29.224 219 122 13 151 352 137 339 8.05e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 66 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTCTTTATCCCCTTTC+TGG 0.137530 6:-81644864 MsG0680034143.01.T01:CDS
AATGGTCTTTATTCTCTTTC+CGG 0.177754 6:-81646233 MsG0680034143.01.T01:intron
AACCAACTTCCTCAATCATT+TGG 0.281812 6:+81644392 None:intergenic
ATAAACTTGGTGGTGTTAAA+TGG 0.297336 6:-81644619 MsG0680034143.01.T01:CDS
CCCACATCACAATCCGAATA+TGG 0.312821 6:+81644790 None:intergenic
TGACCTTATAGTCATTTATA+AGG 0.314634 6:+81644941 None:intergenic
AACATCTTCGTTTGAGGGTA+TGG 0.327509 6:+81644657 None:intergenic
AAGAGGCAACTTCGATATAA+TGG 0.328916 6:+81646406 None:intergenic
GTAGTAGTCTCTTCATGATA+TGG 0.344612 6:+81644580 None:intergenic
GATTTCATTAATTTGCGTTC+AGG 0.353339 6:-81646566 MsG0680034143.01.T01:CDS
TGATGTCGACATGCCATATT+CGG 0.354757 6:-81644803 MsG0680034143.01.T01:CDS
ACCAACTTCCTCAATCATTT+GGG 0.360599 6:+81644393 None:intergenic
TAATTCTTTATCCCCTTTCT+GGG 0.382710 6:-81644863 MsG0680034143.01.T01:CDS
ATCAAAACCAACTTCTTCTT+CGG 0.389932 6:-81646615 MsG0680034143.01.T01:CDS
GTTATATCTTTAGACGGGTT+GGG 0.394446 6:-81644889 MsG0680034143.01.T01:CDS
TGACCTTATAAATGACTATA+AGG 0.394974 6:-81644944 MsG0680034143.01.T01:CDS
TCTTGCGTTGAGCGTCCTCT+TGG 0.403059 6:-81644484 MsG0680034143.01.T01:CDS
ATGGAAAAGGAAATATCATC+AGG 0.432786 6:+81646425 None:intergenic
TGGACCAAACTCTTCATTGT+TGG 0.433176 6:-81644514 MsG0680034143.01.T01:CDS
TTGAATGTGTTTGCAAATCA+TGG 0.436394 6:-81646367 MsG0680034143.01.T01:CDS
AAAACAAACATCTTCGTTTG+AGG 0.439263 6:+81644651 None:intergenic
ACCCAAATGATTGAGGAAGT+TGG 0.449643 6:-81644394 MsG0680034143.01.T01:CDS
AGCTATATATCTCCCAGAAA+GGG 0.452155 6:+81644851 None:intergenic
TGTTATATCTTTAGACGGGT+TGG 0.454662 6:-81644890 MsG0680034143.01.T01:CDS
CGGTCCAACAATGAAGAGTT+TGG 0.457196 6:+81644510 None:intergenic
GACTTTGTTATATCTTTAGA+CGG 0.457536 6:-81644895 MsG0680034143.01.T01:CDS
CAACTTCGATATAATGGAAA+AGG 0.462515 6:+81646412 None:intergenic
AAGAAGTCAATTCTATTCAT+CGG 0.481607 6:-81644366 MsG0680034143.01.T01:CDS
AGCTTGGTGTGGAGGAATCA+TGG 0.485325 6:-81644534 MsG0680034143.01.T01:CDS
ACATGGATGGAGTGTGTCAT+TGG 0.492746 6:-81644756 MsG0680034143.01.T01:CDS
TAAACTTGGTGGTGTTAAAT+GGG 0.497754 6:-81644618 MsG0680034143.01.T01:CDS
TTGTCTAATTCTTATTATGA+CGG 0.511937 6:-81646293 MsG0680034143.01.T01:CDS
CGTTGAGCGTCCTCTTGGAG+TGG 0.520714 6:-81644479 MsG0680034143.01.T01:CDS
ACACTCCATCCATGTAGACT+TGG 0.522257 6:+81644764 None:intergenic
ACATCTTCGTTTGAGGGTAT+GGG 0.523691 6:+81644658 None:intergenic
CCTCTTGGAGTGGGAATGAA+AGG 0.527031 6:-81644469 MsG0680034143.01.T01:CDS
GTAACAAAAGACAACAAGTT+GGG 0.533267 6:-81646502 MsG0680034143.01.T01:CDS
ACTTTGTTATATCTTTAGAC+GGG 0.533920 6:-81644894 MsG0680034143.01.T01:CDS
TGCGGCATGGATAAACTTGG+TGG 0.534311 6:-81644629 MsG0680034143.01.T01:CDS
AAGCTATATATCTCCCAGAA+AGG 0.536992 6:+81644850 None:intergenic
AAACAAACATCTTCGTTTGA+GGG 0.546635 6:+81644652 None:intergenic
TGTGGGAACCCAAGTCTACA+TGG 0.552384 6:-81644773 MsG0680034143.01.T01:CDS
TCATCGGATAATAATATACA+AGG 0.554279 6:-81644350 MsG0680034143.01.T01:CDS
AATCGCTTGAAAGATCTAAG+AGG 0.555698 6:+81646389 None:intergenic
TCGGGATCCGAAGAAGAAGT+TGG 0.560567 6:+81646608 None:intergenic
GATACAACACATTCACCGGC+GGG 0.560590 6:+81644715 None:intergenic
GTTGAGCGTCCTCTTGGAGT+GGG 0.562922 6:-81644478 MsG0680034143.01.T01:CDS
CGTAACAAAAGACAACAAGT+TGG 0.565962 6:-81646503 MsG0680034143.01.T01:CDS
CCTTTCATTCCCACTCCAAG+AGG 0.566879 6:+81644469 None:intergenic
GCCATATTCGGATTGTGATG+TGG 0.570915 6:-81644791 MsG0680034143.01.T01:CDS
AAATGATACAACACATTCAC+CGG 0.574104 6:+81644711 None:intergenic
CACTTCTGCGACAAACATGA+AGG 0.576653 6:-81646465 MsG0680034143.01.T01:CDS
TTTGGGTGAGCTTGGTGTGG+AGG 0.582999 6:-81644542 MsG0680034143.01.T01:CDS
CACTCCATCCATGTAGACTT+GGG 0.586513 6:+81644765 None:intergenic
CCATATTCGGATTGTGATGT+GGG 0.592906 6:-81644790 MsG0680034143.01.T01:CDS
GTCTAAAGATATAACAAAGT+CGG 0.596270 6:+81644897 None:intergenic
GGAACCCAAGTCTACATGGA+TGG 0.612423 6:-81644769 MsG0680034143.01.T01:CDS
TGTGAAGAAAATAGCCCCGC+CGG 0.617220 6:-81644730 MsG0680034143.01.T01:CDS
AATTAGACAATAAATTGTTG+CGG 0.623698 6:+81646306 None:intergenic
GCTATATATCTCCCAGAAAG+GGG 0.632881 6:+81644852 None:intergenic
ATAGCTTAAGAAGTAACTCG+TGG 0.647029 6:-81644834 MsG0680034143.01.T01:CDS
TGGAAAAGGAAATATCATCA+GGG 0.647217 6:+81646426 None:intergenic
TGATACAACACATTCACCGG+CGG 0.650864 6:+81644714 None:intergenic
GCTTAAGAAGTAACTCGTGG+AGG 0.659221 6:-81644831 MsG0680034143.01.T01:CDS
ATACAACACATTCACCGGCG+GGG 0.678993 6:+81644716 None:intergenic
GGACGCTCAACGCAAGACAA+CGG 0.680939 6:+81644490 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTGAATTGTATATT+TGG - Chr6:81644789-81644808 MsG0680034143.01.T01:CDS 10.0%
!! CATTAAATAATAAAAAGAAT+GGG + Chr6:81645511-81645530 None:intergenic 10.0%
!! ATAATATACAAGGAAAAATT+TGG - Chr6:81646607-81646626 MsG0680034143.01.T01:CDS 15.0%
!! GCATTAAATAATAAAAAGAA+TGG + Chr6:81645512-81645531 None:intergenic 15.0%
!! AATTAGACAATAAATTGTTG+CGG + Chr6:81644644-81644663 None:intergenic 20.0%
!! TTGTCTAATTCTTATTATGA+CGG - Chr6:81644654-81644673 MsG0680034143.01.T01:CDS 20.0%
!!! ACTGTTTTTTATTATCTTCA+TGG - Chr6:81645968-81645987 MsG0680034143.01.T01:intron 20.0%
!!! ACTTTTCACATATCAATTTT+GGG - Chr6:81646388-81646407 MsG0680034143.01.T01:CDS 20.0%
!!! TACTTTTCACATATCAATTT+TGG - Chr6:81646387-81646406 MsG0680034143.01.T01:CDS 20.0%
!!! TTGAATTGTATATTTGGTTT+TGG - Chr6:81644795-81644814 MsG0680034143.01.T01:CDS 20.0%
!!! TTTTATTATCTTCATGGATT+TGG - Chr6:81645974-81645993 MsG0680034143.01.T01:intron 20.0%
! AAGAAGTCAATTCTATTCAT+CGG - Chr6:81646581-81646600 MsG0680034143.01.T01:CDS 25.0%
! GACAAAACATTTCGTAAAAA+TGG - Chr6:81644696-81644715 MsG0680034143.01.T01:CDS 25.0%
! GTCTAAAGATATAACAAAGT+CGG + Chr6:81646053-81646072 None:intergenic 25.0%
! TCATCGGATAATAATATACA+AGG - Chr6:81646597-81646616 MsG0680034143.01.T01:CDS 25.0%
! TGACCTTATAAATGACTATA+AGG - Chr6:81646003-81646022 MsG0680034143.01.T01:intron 25.0%
! TGACCTTATAGTCATTTATA+AGG + Chr6:81646009-81646028 None:intergenic 25.0%
! TTTAAAAACCCAAATGATTG+AGG - Chr6:81646546-81646565 MsG0680034143.01.T01:CDS 25.0%
!! ACTTTGTTATATCTTTAGAC+GGG - Chr6:81646053-81646072 MsG0680034143.01.T01:intron 25.0%
!! GACTTTGTTATATCTTTAGA+CGG - Chr6:81646052-81646071 MsG0680034143.01.T01:intron 25.0%
!! TTAATGAAATCGTTTTCTAC+AGG + Chr6:81644372-81644391 None:intergenic 25.0%
!!! CTAGTTCTTTATCTTTTCTT+AGG + Chr6:81646516-81646535 None:intergenic 25.0%
!!! TTTGGTTTTGGTAGTATTAA+TGG - Chr6:81644807-81644826 MsG0680034143.01.T01:CDS 25.0%
AAAACAAACATCTTCGTTTG+AGG + Chr6:81646299-81646318 None:intergenic 30.0%
AAACAAACATCTTCGTTTGA+GGG + Chr6:81646298-81646317 None:intergenic 30.0%
AAATGATACAACACATTCAC+CGG + Chr6:81646239-81646258 None:intergenic 30.0%
AATGGTCTTTATTCTCTTTC+CGG - Chr6:81644714-81644733 MsG0680034143.01.T01:CDS 30.0%
AGAAAATGATGAACAGAGAA+TGG - Chr6:81645208-81645227 MsG0680034143.01.T01:intron 30.0%
ATAATTCTTTATCCCCTTTC+TGG - Chr6:81646083-81646102 MsG0680034143.01.T01:intron 30.0%
ATCAAAACCAACTTCTTCTT+CGG - Chr6:81644332-81644351 MsG0680034143.01.T01:CDS 30.0%
ATGGAAAAGGAAATATCATC+AGG + Chr6:81644525-81644544 None:intergenic 30.0%
CAAGGAAAAATTTGGTCAAT+TGG - Chr6:81646615-81646634 MsG0680034143.01.T01:CDS 30.0%
GTAACAAAAGACAACAAGTT+GGG - Chr6:81644445-81644464 MsG0680034143.01.T01:CDS 30.0%
TAATTCTTTATCCCCTTTCT+GGG - Chr6:81646084-81646103 MsG0680034143.01.T01:intron 30.0%
TCAAATTCCTTAGCAAAATC+TGG + Chr6:81645941-81645960 None:intergenic 30.0%
TGGAAAAGGAAATATCATCA+GGG + Chr6:81644524-81644543 None:intergenic 30.0%
TTGAATGTGTTTGCAAATCA+TGG - Chr6:81644580-81644599 MsG0680034143.01.T01:CDS 30.0%
! ATCTATTCCAGATTTTGCTA+AGG - Chr6:81645931-81645950 MsG0680034143.01.T01:intron 30.0%
! CAACTTCGATATAATGGAAA+AGG + Chr6:81644538-81644557 None:intergenic 30.0%
! GTTTTCTACAGGATTGATAT+CGG + Chr6:81644361-81644380 None:intergenic 30.0%
! TTGTTGTCTTTTGTTACGTT+TGG + Chr6:81644442-81644461 None:intergenic 30.0%
! TTTTCTACAGGATTGATATC+GGG + Chr6:81644360-81644379 None:intergenic 30.0%
!! ATAAACTTGGTGGTGTTAAA+TGG - Chr6:81646328-81646347 MsG0680034143.01.T01:CDS 30.0%
!! GATTTCATTAATTTGCGTTC+AGG - Chr6:81644381-81644400 MsG0680034143.01.T01:CDS 30.0%
!! TAAACTTGGTGGTGTTAAAT+GGG - Chr6:81646329-81646348 MsG0680034143.01.T01:CDS 30.0%
!! TCACTTAAAACCACTTTTCA+GGG - Chr6:81645049-81645068 MsG0680034143.01.T01:intron 30.0%
!! TTCACTTAAAACCACTTTTC+AGG - Chr6:81645048-81645067 MsG0680034143.01.T01:intron 30.0%
!!! AAACGAAGATGTTTGTTTTG+CGG - Chr6:81646300-81646319 MsG0680034143.01.T01:CDS 30.0%
!!! AAGTGGTTTTAAGTGAAAAG+CGG + Chr6:81645045-81645064 None:intergenic 30.0%
AACCAACTTCCTCAATCATT+TGG + Chr6:81646558-81646577 None:intergenic 35.0%
AAGAGGCAACTTCGATATAA+TGG + Chr6:81644544-81644563 None:intergenic 35.0%
AAGCTATATATCTCCCAGAA+AGG + Chr6:81646100-81646119 None:intergenic 35.0%
AATCGCTTGAAAGATCTAAG+AGG + Chr6:81644561-81644580 None:intergenic 35.0%
AATGATGAACAGAGAATGGT+TGG - Chr6:81645212-81645231 MsG0680034143.01.T01:intron 35.0%
ACCAACTTCCTCAATCATTT+GGG + Chr6:81646557-81646576 None:intergenic 35.0%
ACTATTCTATCCCTCTTATG+TGG + Chr6:81645355-81645374 None:intergenic 35.0%
AGATAAAGCCAGAGTGAAAA+TGG - Chr6:81645299-81645318 MsG0680034143.01.T01:intron 35.0%
AGCTATATATCTCCCAGAAA+GGG + Chr6:81646099-81646118 None:intergenic 35.0%
ATAGCTTAAGAAGTAACTCG+TGG - Chr6:81646113-81646132 MsG0680034143.01.T01:intron 35.0%
CGTAACAAAAGACAACAAGT+TGG - Chr6:81644444-81644463 MsG0680034143.01.T01:CDS 35.0%
CTCCATAGAAATGATGACTA+TGG - Chr6:81644840-81644859 MsG0680034143.01.T01:CDS 35.0%
GGAAAAATTTGGTCAATTGG+AGG - Chr6:81646618-81646637 MsG0680034143.01.T01:CDS 35.0%
GTAGTAGTCTCTTCATGATA+TGG + Chr6:81646370-81646389 None:intergenic 35.0%
TGGAATAGATGACTCAACAA+CGG + Chr6:81645921-81645940 None:intergenic 35.0%
TGTTATATCTTTAGACGGGT+TGG - Chr6:81646057-81646076 MsG0680034143.01.T01:intron 35.0%
TTTATTCTCAAACCTCTCAC+CGG + Chr6:81644736-81644755 None:intergenic 35.0%
! ACTGTCAAATGCTTTAGGTT+CGG - Chr6:81645426-81645445 MsG0680034143.01.T01:intron 35.0%
! GTTATATCTTTAGACGGGTT+GGG - Chr6:81646058-81646077 MsG0680034143.01.T01:intron 35.0%
!! ATATCAATTTTGGGTGAGCT+TGG - Chr6:81646397-81646416 MsG0680034143.01.T01:CDS 35.0%
AACATCTTCGTTTGAGGGTA+TGG + Chr6:81646293-81646312 None:intergenic 40.0%
ACCCAAATGATTGAGGAAGT+TGG - Chr6:81646553-81646572 MsG0680034143.01.T01:CDS 40.0%
ACTATGCACGTGACTAACAT+TGG - Chr6:81645457-81645476 MsG0680034143.01.T01:intron 40.0%
ACTATGGCGAAACTGTATTG+TGG - Chr6:81644856-81644875 MsG0680034143.01.T01:CDS 40.0%
ATGGTGAACTTCTAAACCTG+CGG - Chr6:81645318-81645337 MsG0680034143.01.T01:intron 40.0%
CCATATTCGGATTGTGATGT+GGG - Chr6:81646157-81646176 MsG0680034143.01.T01:intron 40.0%
CGCCATAGTCATCATTTCTA+TGG + Chr6:81644845-81644864 None:intergenic 40.0%
GCTATATATCTCCCAGAAAG+GGG + Chr6:81646098-81646117 None:intergenic 40.0%
TCTCACTCTTCCACATAAGA+GGG - Chr6:81645342-81645361 MsG0680034143.01.T01:intron 40.0%
TGATGTCGACATGCCATATT+CGG - Chr6:81646144-81646163 MsG0680034143.01.T01:intron 40.0%
TGCACACTGTCAAATGCTTT+AGG - Chr6:81645421-81645440 MsG0680034143.01.T01:intron 40.0%
TGGACCAAACTCTTCATTGT+TGG - Chr6:81646433-81646452 MsG0680034143.01.T01:CDS 40.0%
TTCATGTGAGATGCAAACGA+TGG - Chr6:81645268-81645287 MsG0680034143.01.T01:intron 40.0%
TTCCACCATAGTTGTCAAAG+CGG + Chr6:81645851-81645870 None:intergenic 40.0%
TTCTCACTCTTCCACATAAG+AGG - Chr6:81645341-81645360 MsG0680034143.01.T01:intron 40.0%
TTTATTCTCTTTCCGGTGAG+AGG - Chr6:81644721-81644740 MsG0680034143.01.T01:CDS 40.0%
! ACATCTTCGTTTGAGGGTAT+GGG + Chr6:81646292-81646311 None:intergenic 40.0%
! GAAATGTTTTGTCGTGAACG+AGG + Chr6:81644689-81644708 None:intergenic 40.0%
! GAAGTTCACCATTTTCACTC+TGG + Chr6:81645310-81645329 None:intergenic 40.0%
! TTTTGCGGCATGGATAAACT+TGG - Chr6:81646315-81646334 MsG0680034143.01.T01:CDS 40.0%
!! AGGTAGGAGTTTGGTTCTTT+GGG + Chr6:81645882-81645901 None:intergenic 40.0%
!! AGTTTGGTTCTTTGGGTAGT+TGG + Chr6:81645875-81645894 None:intergenic 40.0%
!! GTTTGGTTCTTTGGGTAGTT+GGG + Chr6:81645874-81645893 None:intergenic 40.0%
!!! AAGATGTTTGTTTTGCGGCA+TGG - Chr6:81646305-81646324 MsG0680034143.01.T01:CDS 40.0%
ACACTCCATCCATGTAGACT+TGG + Chr6:81646186-81646205 None:intergenic 45.0%
ACATGGATGGAGTGTGTCAT+TGG - Chr6:81646191-81646210 MsG0680034143.01.T01:intron 45.0%
AGAATGGTTGGAGAAGAAGG+AGG - Chr6:81645224-81645243 MsG0680034143.01.T01:intron 45.0%
AGTTGTTCCGATCTCAGATC+CGG + Chr6:81645147-81645166 None:intergenic 45.0%
ATGTGAGATGCAAACGATGG+CGG - Chr6:81645271-81645290 MsG0680034143.01.T01:intron 45.0%
CACTCCATCCATGTAGACTT+GGG + Chr6:81646185-81646204 None:intergenic 45.0%
CACTTCTGCGACAAACATGA+AGG - Chr6:81644482-81644501 MsG0680034143.01.T01:CDS 45.0%
CAGAGAATGGTTGGAGAAGA+AGG - Chr6:81645221-81645240 MsG0680034143.01.T01:intron 45.0%
CCCACATCACAATCCGAATA+TGG + Chr6:81646160-81646179 None:intergenic 45.0%
CGGTCCAACAATGAAGAGTT+TGG + Chr6:81646440-81646459 None:intergenic 45.0%
CGTTTCCGCTTTGACAACTA+TGG - Chr6:81645843-81645862 MsG0680034143.01.T01:intron 45.0%
GCCATATTCGGATTGTGATG+TGG - Chr6:81646156-81646175 MsG0680034143.01.T01:intron 45.0%
GCTTAAGAAGTAACTCGTGG+AGG - Chr6:81646116-81646135 MsG0680034143.01.T01:intron 45.0%
GGATCTGATATCAGAACAGC+CGG - Chr6:81645083-81645102 MsG0680034143.01.T01:intron 45.0%
TAGTTGTCAAAGCGGAAACG+CGG + Chr6:81645843-81645862 None:intergenic 45.0%
TGATACAACACATTCACCGG+CGG + Chr6:81646236-81646255 None:intergenic 45.0%
TTCCGCTTTGACAACTATGG+TGG - Chr6:81645846-81645865 MsG0680034143.01.T01:intron 45.0%
! GGAACAACTGGATCTGAGAT+CGG - Chr6:81645158-81645177 MsG0680034143.01.T01:intron 45.0%
!! AATTTTGGGTGAGCTTGGTG+TGG - Chr6:81646402-81646421 MsG0680034143.01.T01:CDS 45.0%
!! GACTCAACAACGGATTGAAC+CGG + Chr6:81645911-81645930 None:intergenic 45.0%
!! GAGGTAGGAGTTTGGTTCTT+TGG + Chr6:81645883-81645902 None:intergenic 45.0%
ATACAACACATTCACCGGCG+GGG + Chr6:81646234-81646253 None:intergenic 50.0%
CCTCTTGGAGTGGGAATGAA+AGG - Chr6:81646478-81646497 MsG0680034143.01.T01:CDS 50.0%
CCTTTCATTCCCACTCCAAG+AGG + Chr6:81646481-81646500 None:intergenic 50.0%
GAACCCTCTGTTGTCAAACG+CGG - Chr6:81644878-81644897 MsG0680034143.01.T01:CDS 50.0%
GATACAACACATTCACCGGC+GGG + Chr6:81646235-81646254 None:intergenic 50.0%
GGAACCCAAGTCTACATGGA+TGG - Chr6:81646178-81646197 MsG0680034143.01.T01:intron 50.0%
GGCCACCCTAAAAATTGACG+CGG + Chr6:81645812-81645831 None:intergenic 50.0%
GGTTGTTCCGATCTCAGATC+CGG + Chr6:81645126-81645145 None:intergenic 50.0%
TCGGGATCCGAAGAAGAAGT+TGG + Chr6:81644342-81644361 None:intergenic 50.0%
TGCGGCATGGATAAACTTGG+TGG - Chr6:81646318-81646337 MsG0680034143.01.T01:CDS 50.0%
TGTGAAGAAAATAGCCCCGC+CGG - Chr6:81646217-81646236 MsG0680034143.01.T01:intron 50.0%
TGTGGGAACCCAAGTCTACA+TGG - Chr6:81646174-81646193 MsG0680034143.01.T01:intron 50.0%
! AGAACAGCCGGATCTGAGAT+CGG - Chr6:81645095-81645114 MsG0680034143.01.T01:intron 50.0%
! GCTGTTTCGACCCTGAAAAG+TGG + Chr6:81645062-81645081 None:intergenic 50.0%
! GGAACAACCGGATCTGAGAT+CGG - Chr6:81645137-81645156 MsG0680034143.01.T01:intron 50.0%
! GGATCTGAGATCGGAACAAC+CGG - Chr6:81645125-81645144 MsG0680034143.01.T01:intron 50.0%
! GGATCTGAGATCGGAACAAC+TGG - Chr6:81645125-81645144 MsG0680034143.01.T01:intron 50.0%
! TTTGGAGAAAGCGGGTTTCG+CGG - Chr6:81644974-81644993 MsG0680034143.01.T01:CDS 50.0%
!! AACAACGGATTGAACCGGAC+TGG + Chr6:81645906-81645925 None:intergenic 50.0%
!! ACAACGGATTGAACCGGACT+GGG + Chr6:81645905-81645924 None:intergenic 50.0%
!! AGCTTGGTGTGGAGGAATCA+TGG - Chr6:81646413-81646432 MsG0680034143.01.T01:CDS 50.0%
!! CTTTTCAGGGTCGAAACAGC+TGG - Chr6:81645062-81645081 MsG0680034143.01.T01:intron 50.0%
AAGGAGGTCGCGCAAATTCG+TGG - Chr6:81645240-81645259 MsG0680034143.01.T01:intron 55.0%
CAAACTCCTACCTCCCAGTC+CGG - Chr6:81645889-81645908 MsG0680034143.01.T01:intron 55.0%
CCCTAAAAATTGACGCGGCG+CGG + Chr6:81645807-81645826 None:intergenic 55.0%
GGACGCTCAACGCAAGACAA+CGG + Chr6:81646460-81646479 None:intergenic 55.0%
GGCTGTTCCGATCTCAGATC+CGG + Chr6:81645105-81645124 None:intergenic 55.0%
GTTGAGCGTCCTCTTGGAGT+GGG - Chr6:81646469-81646488 MsG0680034143.01.T01:CDS 55.0%
TCTTGCGTTGAGCGTCCTCT+TGG - Chr6:81646463-81646482 MsG0680034143.01.T01:CDS 55.0%
TGTGGAAGAGTGAGAACCGC+AGG + Chr6:81645337-81645356 None:intergenic 55.0%
! ACCGCGCCGCGTCAATTTTT+AGG - Chr6:81645803-81645822 MsG0680034143.01.T01:intron 55.0%
! ATTGAACCGGACTGGGAGGT+AGG + Chr6:81645898-81645917 None:intergenic 55.0%
! CCGCGCCGCGTCAATTTTTA+GGG - Chr6:81645804-81645823 MsG0680034143.01.T01:intron 55.0%
! GGAACAGCCGGATCTGAGAT+CGG - Chr6:81645116-81645135 MsG0680034143.01.T01:intron 55.0%
! GGATCTGAGATCGGAACAGC+CGG - Chr6:81645104-81645123 MsG0680034143.01.T01:intron 55.0%
! GTGACGCGGCAGTTCAGTTT+TGG + Chr6:81644935-81644954 None:intergenic 55.0%
! TGAGATGCAAACGATGGCGG+TGG - Chr6:81645274-81645293 MsG0680034143.01.T01:intron 55.0%
!! CGCCGCGTCAATTTTTAGGG+TGG - Chr6:81645807-81645826 MsG0680034143.01.T01:intron 55.0%
!! TTTGGGTGAGCTTGGTGTGG+AGG - Chr6:81646405-81646424 MsG0680034143.01.T01:CDS 55.0%
AATTGACGCGGCGCGGTATG+CGG + Chr6:81645800-81645819 None:intergenic 60.0%
CGCAGCGCGTTTGGAGAAAG+CGG - Chr6:81644965-81644984 MsG0680034143.01.T01:CDS 60.0%
CGGCCGCGTTTGACAACAGA+GGG + Chr6:81644884-81644903 None:intergenic 60.0%
CGTTGAGCGTCCTCTTGGAG+TGG - Chr6:81646468-81646487 MsG0680034143.01.T01:CDS 60.0%
CTTTCTCCAAACGCGCTGCG+CGG + Chr6:81644965-81644984 None:intergenic 60.0%
GCAGCGCGTTTGGAGAAAGC+GGG - Chr6:81644966-81644985 MsG0680034143.01.T01:CDS 60.0%
GGACCAAAAGCGGGTCAAGG+CGG - Chr6:81645019-81645038 MsG0680034143.01.T01:intron 60.0%
! ACGGATTGAACCGGACTGGG+AGG + Chr6:81645902-81645921 None:intergenic 60.0%
! CGGACTGGGAGGTAGGAGTT+TGG + Chr6:81645891-81645910 None:intergenic 60.0%
ATTGACGCGGCGCGGTATGC+GGG + Chr6:81645799-81645818 None:intergenic 65.0%
GCGGCCGCGTTTGACAACAG+AGG + Chr6:81644885-81644904 None:intergenic 65.0%
GGCGGACCAAAAGCGGGTCA+AGG - Chr6:81645016-81645035 MsG0680034143.01.T01:intron 65.0%
GTCAAAGCGGAAACGCGGCG+CGG + Chr6:81645838-81645857 None:intergenic 65.0%
TTGTCAAACGCGGCCGCTCC+CGG - Chr6:81644888-81644907 MsG0680034143.01.T01:CDS 65.0%
CGGGTTTCGCGGCCGCAATC+CGG - Chr6:81644985-81645004 MsG0680034143.01.T01:CDS 70.0%
GAGCGGGGCGGACCAAAAGC+GGG - Chr6:81645010-81645029 MsG0680034143.01.T01:intron 70.0%
GGAGCGGGGCGGACCAAAAG+CGG - Chr6:81645009-81645028 MsG0680034143.01.T01:intron 70.0%
GTTTCGCGGCCGCAATCCGG+TGG - Chr6:81644988-81645007 MsG0680034143.01.T01:CDS 70.0%
TCTCCAAACGCGCTGCGCGG+TGG + Chr6:81644962-81644981 None:intergenic 70.0%
TGCGCGGTGGCGTTGTGACG+CGG + Chr6:81644949-81644968 None:intergenic 70.0%
TTTGGTCCGCCCCGCTCCAC+CGG + Chr6:81645007-81645026 None:intergenic 70.0%
! CGGCCGCCTTGACCCGCTTT+TGG + Chr6:81645025-81645044 None:intergenic 70.0%
ACGCCACCGCGCAGCGCGTT+TGG - Chr6:81644956-81644975 MsG0680034143.01.T01:CDS 75.0%
CGCAATCCGGTGGAGCGGGG+CGG - Chr6:81644998-81645017 MsG0680034143.01.T01:CDS 75.0%
CGCCCCGCTCCACCGGATTG+CGG + Chr6:81645000-81645019 None:intergenic 75.0%
CGGCCGCAATCCGGTGGAGC+GGG - Chr6:81644994-81645013 MsG0680034143.01.T01:CDS 75.0%
GCGGCCGCAATCCGGTGGAG+CGG - Chr6:81644993-81645012 MsG0680034143.01.T01:CDS 75.0%
GGCCGCAATCCGGTGGAGCG+GGG - Chr6:81644995-81645014 MsG0680034143.01.T01:CDS 75.0%
! AGCGGAAACGCGGCGCGGCG+CGG + Chr6:81645833-81645852 None:intergenic 80.0%
! ATGCGGGCGCGACGCGGACG+CGG + Chr6:81645783-81645802 None:intergenic 80.0%
! CGCGGTATGCGGGCGCGACG+CGG + Chr6:81645789-81645808 None:intergenic 80.0%
! CTCCCGGCGCTATCGCGGCG+CGG - Chr6:81644904-81644923 MsG0680034143.01.T01:CDS 80.0%
! CTCCGCGCCGCGATAGCGCC+GGG + Chr6:81644909-81644928 None:intergenic 80.0%
! GCTCCGCGCCGCGATAGCGC+CGG + Chr6:81644910-81644929 None:intergenic 80.0%
! GGCCGCTCCCGGCGCTATCG+CGG - Chr6:81644899-81644918 MsG0680034143.01.T01:CDS 80.0%
! GGCGCTATCGCGGCGCGGAG+CGG - Chr6:81644909-81644928 MsG0680034143.01.T01:CDS 80.0%
!! CGCCGCGATAGCGCCGGGAG+CGG + Chr6:81644904-81644923 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr6 gene 81644324 81646645 81644324 ID=MsG0680034143.01;Name=MsG0680034143.01
Chr6 mRNA 81644324 81646645 81644324 ID=MsG0680034143.01.T01;Parent=MsG0680034143.01;Name=MsG0680034143.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|2|0|371
Chr6 exon 81646234 81646645 81646234 ID=MsG0680034143.01.T01:exon:11723;Parent=MsG0680034143.01.T01
Chr6 exon 81644324 81645027 81644324 ID=MsG0680034143.01.T01:exon:11724;Parent=MsG0680034143.01.T01
Chr6 CDS 81646234 81646645 81646234 ID=MsG0680034143.01.T01:cds;Parent=MsG0680034143.01.T01
Chr6 CDS 81644324 81645027 81644324 ID=MsG0680034143.01.T01:cds;Parent=MsG0680034143.01.T01
Gene Sequence

>MsG0680034143.01.T01

ATGCAGAAATCAAAACCAACTTCTTCTTCGGATCCCGATATCAATCCTGTAGAAAACGATTTCATTAATTTGCGTTCAGGTAAAAAAGTTCTGAAACGTGAAATAATCACTTCTTCCAAACGTAACAAAAGACAACAAGTTGGGTCTCGTCAAATAATCACTTCTGCGACAAACATGAAGGTGAGCAATACTTATATCCCTGATGATATTTCCTTTTCCATTATATCGAAGTTGCCTCTTAGATCTTTCAAGCGATTTGAATGTGTTTGCAAATCATGGTCTCTCTTATCTGAAAACAATCATTTCATGAACATGTTCCGCAACAATTTATTGTCTAATTCTTATTATGACGGAGCATCTATCCTCGTTCACGACAAAACATTTCGTAAAAATGGTCTTTATTCTCTTTCCGATTTTGCTAAGGAATTTGATAGACTTACTGTTTTTTATTATCTTCATGGATTTGGTTATGATGACCTTATAAATGACTATAAGGTCATTCGTTACGTAACTGTCATTGCCGACTTTGTTATATCTTTAGACGGGTTGGGAGATAATTCTTTATCCCCTTTCTGGGAGATATATAGCTTAAGAAGTAACTCGTGGAGGAAACTTGATGTCGACATGCCATATTCGGATTGTGATGTGGGAACCCAAGTCTACATGGATGGAGTGTGTCATTGGTTCTGTGAAGAAAATAGCCCCGCCGGTGAATGTGTTGTATCATTTTACTTGAGCAATGAGATGTTTTTAGTAACACCCATACCCTCAAACGAAGATGTTTGTTTTGCGGCATGGATAAACTTGGTGGTGTTAAATGGGTCTGTTGCGTTGATTCCATATCATGAAGAGACTACTACTTTTCACATATCAATTTTGGGTGAGCTTGGTGTGGAGGAATCATGGACCAAACTCTTCATTGTTGGACCGTTGTCTTGCGTTGAGCGTCCTCTTGGAGTGGGAATGAAAGGAGAAATATTCTTCCTAAGAAAAGATAAAGAACTAGTTTCGCTTGATTTAAAAACCCAAATGATTGAGGAAGTTGGTTTTAAAGAAGTCAATTCTATTCATCGGATAATAATATACAAGGAAAAATTTGGTCAATTGGAGGAATAA
Protein sequence

>MsG0680034143.01.T01

MQKSKPTSSSDPDINPVENDFINLRSGKKVLKREIITSSKRNKRQQVGSRQIITSATNMKVSNTYIPDDISFSIISKLPLRSFKRFECVCKSWSLLSENNHFMNMFRNNLLSNSYYDGASILVHDKTFRKNGLYSLSDFAKEFDRLTVFYYLHGFGYDDLINDYKVIRYVTVIADFVISLDGLGDNSLSPFWEIYSLRSNSWRKLDVDMPYSDCDVGTQVYMDGVCHWFCEENSPAGECVVSFYLSNEMFLVTPIPSNEDVCFAAWINLVVLNGSVALIPYHEETTTFHISILGELGVEESWTKLFIVGPLSCVERPLGVGMKGEIFFLRKDKELVSLDLKTQMIEEVGFKEVNSIHRIIIYKEKFGQLEE*