AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019270.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019270.01.T01 MTR_4g028510 81.319 364 65 3 1 361 1 364 0.0 596
MsG0480019270.01.T01 MTR_4g028660 79.834 362 71 2 1 361 1 361 0.0 594
MsG0480019270.01.T01 MTR_4g027450 79.834 362 71 2 1 361 1 361 0.0 594
MsG0480019270.01.T01 MTR_4g028680 80.165 363 69 3 1 361 1 362 0.0 583
MsG0480019270.01.T01 MTR_4g028750 70.523 363 102 4 1 361 1 360 1.38e-180 506
MsG0480019270.01.T01 MTR_4g130330 68.362 354 104 3 12 361 3 352 4.29e-173 487
MsG0480019270.01.T01 MTR_6g079810 61.022 372 125 6 5 361 59 425 1.35e-145 420
MsG0480019270.01.T01 MTR_0054s0100 58.649 370 140 5 2 361 4 370 3.92e-143 412
MsG0480019270.01.T01 MTR_0054s0090 59.189 370 136 6 2 361 4 368 6.97e-143 411
MsG0480019270.01.T01 MTR_0134s0060 57.937 378 135 6 4 361 1 374 3.52e-142 409
MsG0480019270.01.T01 MTR_6g079770 59.416 377 135 6 2 361 4 379 3.11e-137 397
MsG0480019270.01.T01 MTR_6g080680 58.791 364 133 8 3 361 6 357 2.18e-136 394
MsG0480019270.01.T01 MTR_6g086825 56.267 375 139 8 3 361 57 422 6.62e-130 380
MsG0480019270.01.T01 MTR_6g090180 56.649 376 132 12 5 361 37 400 2.40e-128 375
MsG0480019270.01.T01 MTR_6g090250 53.889 360 132 8 34 361 29 386 4.62e-120 353
MsG0480019270.01.T01 MTR_6g078010 59.810 316 101 8 53 361 1 297 1.39e-118 347
MsG0480019270.01.T01 MTR_6g478230 52.910 378 135 10 4 361 15 369 1.34e-114 340
MsG0480019270.01.T01 MTR_7g104710 55.660 318 100 2 3 314 4 286 4.46e-112 330
MsG0480019270.01.T01 MTR_7g023800 54.045 309 104 4 55 361 1 273 2.04e-105 312
MsG0480019270.01.T01 MTR_8g063440 47.170 371 157 13 4 361 1 345 5.39e-96 291
MsG0480019270.01.T01 MTR_5g097220 46.594 367 164 9 16 361 13 368 2.82e-95 290
MsG0480019270.01.T01 MTR_8g012090 47.297 370 136 10 3 360 4 326 2.86e-94 285
MsG0480019270.01.T01 MTR_0129s0070 47.059 374 168 11 1 361 2 358 2.06e-92 282
MsG0480019270.01.T01 MTR_2g022000 42.967 391 181 8 1 361 1 379 2.48e-90 278
MsG0480019270.01.T01 MTR_0129s0120 46.791 374 169 11 1 361 2 358 9.20e-90 275
MsG0480019270.01.T01 MTR_3g011120 45.283 371 152 15 8 361 6 342 2.21e-87 268
MsG0480019270.01.T01 MTR_4g055820 45.213 376 161 13 5 355 4 359 7.26e-87 266
MsG0480019270.01.T01 MTR_5g092850 43.750 384 173 10 1 362 1 363 4.36e-86 266
MsG0480019270.01.T01 MTR_5g097680 44.103 390 182 11 4 361 6 391 7.19e-86 266
MsG0480019270.01.T01 MTR_5g074850 44.845 388 168 14 1 362 20 387 1.09e-85 278
MsG0480019270.01.T01 MTR_8g467670 43.802 363 164 11 10 361 8 341 1.12e-85 265
MsG0480019270.01.T01 MTR_6g079790 52.899 276 111 7 99 361 2 271 2.95e-85 261
MsG0480019270.01.T01 MTR_2g021800 41.985 393 183 9 1 361 1 380 4.83e-85 264
MsG0480019270.01.T01 MTR_5g097330 44.094 381 173 13 2 361 3 364 5.60e-84 261
MsG0480019270.01.T01 MTR_6g087620 53.237 278 97 6 88 361 2 250 6.47e-84 256
MsG0480019270.01.T01 MTR_7g017170 45.706 361 165 14 2 349 5 347 1.06e-83 260
MsG0480019270.01.T01 MTR_7g017130 45.706 361 165 14 2 349 5 347 1.16e-83 259
MsG0480019270.01.T01 MTR_5g059430 42.677 396 159 14 8 361 18 387 9.25e-83 258
MsG0480019270.01.T01 MTR_6g461660 44.180 378 172 12 2 361 6 362 2.14e-82 256
MsG0480019270.01.T01 MTR_7g069550 43.536 379 167 16 8 361 7 363 1.69e-81 254
MsG0480019270.01.T01 MTR_2g038680 42.711 391 168 14 4 361 5 372 7.59e-81 253
MsG0480019270.01.T01 MTR_2g034700 45.326 353 162 8 9 357 7 332 1.72e-79 248
MsG0480019270.01.T01 MTR_5g069390 43.536 379 172 13 8 361 18 379 2.76e-79 251
MsG0480019270.01.T01 MTR_5g037680 44.022 368 159 13 12 360 4 343 7.79e-79 249
MsG0480019270.01.T01 MTR_5g024260 42.368 380 179 13 1 360 7 366 3.21e-78 246
MsG0480019270.01.T01 MTR_8g064890 42.149 363 181 8 1 354 1 343 1.08e-76 241
MsG0480019270.01.T01 MTR_2g021950 41.534 378 187 12 1 361 1 361 1.16e-76 241
MsG0480019270.01.T01 MTR_0129s0050 42.819 376 172 9 13 361 11 370 1.82e-76 241
MsG0480019270.01.T01 MTR_5g075370 43.158 380 167 16 12 362 4 363 1.89e-76 251
MsG0480019270.01.T01 MTR_1g007450 43.386 378 174 15 4 361 1 358 1.94e-76 242
MsG0480019270.01.T01 MTR_4g102410 42.440 377 184 14 4 361 50 412 3.47e-76 242
MsG0480019270.01.T01 MTR_7g017040 42.895 373 181 11 4 361 5 360 1.72e-75 239
MsG0480019270.01.T01 MTR_2g021770 41.623 382 178 12 8 361 5 369 1.85e-75 239
MsG0480019270.01.T01 MTR_8g041270 41.837 392 174 14 1 361 1 369 2.23e-75 239
MsG0480019270.01.T01 MTR_1g007410 42.857 378 173 14 1 357 7 362 5.65e-75 238
MsG0480019270.01.T01 MTR_4g117550 41.274 361 161 9 13 361 14 335 7.30e-75 236
MsG0480019270.01.T01 MTR_2g104340 42.298 383 172 14 2 361 3 359 2.76e-74 236
MsG0480019270.01.T01 MTR_2g066200 41.240 371 184 13 4 361 1 350 8.54e-74 234
MsG0480019270.01.T01 MTR_0831s0010 40.860 372 179 14 5 361 38 383 8.87e-74 235
MsG0480019270.01.T01 MTR_8g464770 42.458 358 173 8 13 361 9 342 2.38e-73 233
MsG0480019270.01.T01 MTR_5g097350 42.286 350 165 10 25 361 25 350 4.77e-73 232
MsG0480019270.01.T01 MTR_7g079640 43.020 351 157 13 15 354 12 330 2.54e-72 230
MsG0480019270.01.T01 MTR_5g096910 42.400 375 176 13 3 361 4 354 1.26e-71 228
MsG0480019270.01.T01 MTR_6g090260 69.737 152 46 0 210 361 73 224 1.62e-71 224
MsG0480019270.01.T01 MTR_6g090260 75.806 62 15 0 4 65 8 69 1.95e-22 95.5
MsG0480019270.01.T01 MTR_5g096630 39.314 379 193 11 3 357 6 371 9.27e-71 227
MsG0480019270.01.T01 MTR_2g065860 41.096 365 193 11 4 361 1 350 2.52e-70 225
MsG0480019270.01.T01 MTR_6g465360 49.593 246 103 4 1 225 42 287 2.64e-70 222
MsG0480019270.01.T01 MTR_8g046310 40.970 371 174 11 4 361 2 340 6.12e-70 224
MsG0480019270.01.T01 MTR_2g066170 40.431 371 185 14 4 361 1 348 6.68e-70 224
MsG0480019270.01.T01 MTR_8g039500 40.599 367 181 14 4 361 1 339 1.41e-68 219
MsG0480019270.01.T01 MTR_2g066150 39.722 360 173 11 4 360 1 319 2.64e-68 219
MsG0480019270.01.T01 MTR_2g065840 41.033 368 188 13 4 361 1 349 1.03e-67 218
MsG0480019270.01.T01 MTR_8g033140 37.624 404 178 14 3 361 5 379 9.35e-67 217
MsG0480019270.01.T01 MTR_8g013000 42.473 372 169 16 9 357 4 353 1.15e-66 216
MsG0480019270.01.T01 MTR_5g064700 41.071 336 165 14 55 361 1 332 5.80e-66 213
MsG0480019270.01.T01 MTR_4g014370 38.684 380 199 10 6 361 2 371 1.13e-65 214
MsG0480019270.01.T01 MTR_1g007430 40.857 350 156 10 27 357 7 324 1.16e-65 211
MsG0480019270.01.T01 MTR_5g072060 40.650 369 159 15 15 361 5 335 3.42e-65 218
MsG0480019270.01.T01 MTR_5g092860 41.261 349 151 12 34 361 20 335 7.54e-65 210
MsG0480019270.01.T01 MTR_6g070880 49.180 244 104 7 4 232 21 259 1.03e-64 206
MsG0480019270.01.T01 MTR_6g071420 49.180 244 104 7 4 232 21 259 1.03e-64 206
MsG0480019270.01.T01 MTR_1g053510 37.113 388 194 9 3 361 2 368 1.28e-64 211
MsG0480019270.01.T01 MTR_8g033090 37.688 398 183 13 4 361 2 374 1.36e-64 211
MsG0480019270.01.T01 MTR_7g111700 39.785 372 146 11 15 363 14 330 3.64e-64 208
MsG0480019270.01.T01 MTR_8g046200 36.967 422 167 14 1 361 1 384 4.86e-64 210
MsG0480019270.01.T01 MTR_8g063330 37.736 371 188 12 4 354 1 348 1.36e-63 210
MsG0480019270.01.T01 MTR_2g104280 40.000 380 177 14 14 363 12 370 2.21e-63 207
MsG0480019270.01.T01 MTR_2g064950 38.381 383 180 14 4 361 1 352 6.44e-63 206
MsG0480019270.01.T01 MTR_7g016930 41.742 333 155 11 4 330 5 304 2.44e-62 202
MsG0480019270.01.T01 MTR_5g043605 36.729 373 152 9 1 361 2 302 2.80e-62 204
MsG0480019270.01.T01 MTR_1g098180 39.566 369 160 13 7 361 9 328 7.94e-62 202
MsG0480019270.01.T01 MTR_8g036970 39.193 347 143 9 20 361 2 285 2.28e-61 201
MsG0480019270.01.T01 MTR_8g032980 36.700 406 182 14 5 361 4 383 7.45e-61 201
MsG0480019270.01.T01 MTR_8g064790 37.883 359 158 10 5 361 4 299 1.82e-58 193
MsG0480019270.01.T01 MTR_5g091140 39.037 374 172 12 4 357 36 373 7.25e-58 194
MsG0480019270.01.T01 MTR_5g074800 40.729 329 152 16 55 361 1 308 4.80e-57 189
MsG0480019270.01.T01 MTR_8g033110 35.787 394 188 12 4 356 2 371 7.89e-57 191
MsG0480019270.01.T01 MTR_5g022850 36.216 370 147 12 14 361 14 316 2.91e-56 187
MsG0480019270.01.T01 MTR_4g007940 37.267 322 155 13 67 361 3 304 4.12e-56 187
MsG0480019270.01.T01 MTR_8g018110 34.447 389 193 11 4 361 2 359 6.39e-56 188
MsG0480019270.01.T01 MTR_1g050308 36.043 369 150 11 2 361 21 312 1.30e-55 186
MsG0480019270.01.T01 MTR_8g046220 36.591 399 178 13 5 361 3 368 2.97e-55 186
MsG0480019270.01.T01 MTR_5g096900 42.900 331 140 15 13 321 9 312 3.56e-55 184
MsG0480019270.01.T01 MTR_8g063370 37.607 351 181 12 20 360 28 350 4.79e-55 186
MsG0480019270.01.T01 MTR_5g076490 40.523 306 147 9 53 346 1 283 2.76e-54 182
MsG0480019270.01.T01 MTR_5g068490 41.132 265 122 9 96 359 8 239 2.55e-52 175
MsG0480019270.01.T01 MTR_8g063350 35.493 355 155 11 10 354 8 298 4.48e-51 174
MsG0480019270.01.T01 MTR_8g063310 35.925 373 201 16 1 360 9 356 9.91e-51 174
MsG0480019270.01.T01 MTR_1g050312 39.519 291 121 12 83 362 12 258 6.23e-49 166
MsG0480019270.01.T01 MTR_5g094350 38.966 290 134 10 14 284 11 276 7.81e-46 158
MsG0480019270.01.T01 MTR_5g086590 38.767 227 121 4 135 361 13 221 1.51e-45 156
MsG0480019270.01.T01 MTR_6g079730 66.071 112 38 0 250 361 1 112 1.25e-44 150
MsG0480019270.01.T01 MTR_4g016000 40.724 221 88 7 140 349 2 190 1.60e-44 153
MsG0480019270.01.T01 MTR_3g018750 45.192 208 86 7 176 362 2 202 2.70e-44 153
MsG0480019270.01.T01 MTR_2g021920 46.040 202 91 4 177 361 37 237 6.24e-44 153
MsG0480019270.01.T01 MTR_6g004450 46.392 194 88 6 177 363 49 233 1.65e-43 152
MsG0480019270.01.T01 MTR_5g023970 53.205 156 68 3 207 361 6 157 1.03e-41 145
MsG0480019270.01.T01 MTR_5g098950 42.174 230 87 7 133 357 86 274 1.28e-41 147
MsG0480019270.01.T01 MTR_5g097820 37.795 254 127 8 12 251 19 255 1.62e-41 146
MsG0480019270.01.T01 MTR_4g094400 66.981 106 23 2 239 332 6 111 8.91e-41 140
MsG0480019270.01.T01 MTR_6g009350 43.939 198 91 6 175 361 6 194 1.09e-40 142
MsG0480019270.01.T01 MTR_8g033000 34.783 345 169 14 53 361 1 325 1.14e-39 144
MsG0480019270.01.T01 MTR_1g076810 40.873 252 122 10 4 244 6 241 3.75e-39 147
MsG0480019270.01.T01 MTR_5g097850 51.974 152 60 3 217 361 63 208 5.95e-39 139
MsG0480019270.01.T01 MTR_5g037190 37.544 285 124 13 2 269 3 250 2.15e-36 132
MsG0480019270.01.T01 MTR_1g115205 36.905 252 116 7 7 249 18 235 1.32e-34 128
MsG0480019270.01.T01 MTR_7g019250 36.444 225 99 6 149 361 206 398 7.22e-34 130
MsG0480019270.01.T01 MTR_8g035690 37.069 232 99 8 162 358 43 262 5.44e-32 122
MsG0480019270.01.T01 MTR_1g068835 29.086 361 202 15 14 360 2 322 1.99e-31 122
MsG0480019270.01.T01 MTR_3g030620 47.518 141 67 4 226 361 5 143 3.85e-31 116
MsG0480019270.01.T01 MTR_5g066420 52.459 122 55 3 243 361 1 122 1.35e-30 114
MsG0480019270.01.T01 MTR_5g097540 45.638 149 68 5 211 357 96 233 3.87e-30 117
MsG0480019270.01.T01 MTR_2g104260 35.017 297 144 14 2 273 3 275 8.39e-30 115
MsG0480019270.01.T01 MTR_7g017150 49.650 143 67 3 205 346 75 213 8.47e-30 115
MsG0480019270.01.T01 MTR_7g017120 48.630 146 70 3 202 346 71 212 2.73e-29 114
MsG0480019270.01.T01 MTR_4g014370 42.236 161 81 3 205 361 147 299 2.92e-29 115
MsG0480019270.01.T01 MTR_4g014370 32.381 210 126 7 2 199 10 215 9.99e-17 80.5
MsG0480019270.01.T01 MTR_2g426070 27.397 365 217 13 17 360 7 344 6.59e-29 116
MsG0480019270.01.T01 MTR_1g068860 29.609 358 202 17 16 360 4 324 2.11e-28 114
MsG0480019270.01.T01 MTR_0667s0010 26.393 341 210 13 11 340 1 311 4.81e-28 114
MsG0480019270.01.T01 MTR_5g096920 52.500 120 50 3 243 361 1 114 6.89e-28 107
MsG0480019270.01.T01 MTR_3g083010 28.324 346 210 13 16 344 6 330 9.06e-28 113
MsG0480019270.01.T01 MTR_4g133170 26.571 350 219 11 16 360 4 320 1.17e-27 112
MsG0480019270.01.T01 MTR_5g097650 45.395 152 72 5 3 153 9 150 3.34e-26 102
MsG0480019270.01.T01 MTR_2g028160 25.606 371 227 11 16 362 5 350 4.26e-26 108
MsG0480019270.01.T01 MTR_1g068875 27.273 352 215 14 16 360 4 321 5.00e-26 107
MsG0480019270.01.T01 MTR_8g073570 40.556 180 85 9 14 188 8 170 6.89e-26 102
MsG0480019270.01.T01 MTR_2g028130 28.035 346 210 12 16 346 5 326 8.01e-26 107
MsG0480019270.01.T01 MTR_2g028140 27.248 367 226 14 16 360 5 352 9.15e-26 107
MsG0480019270.01.T01 MTR_2g426090 26.891 357 212 15 24 360 14 341 2.98e-25 105
MsG0480019270.01.T01 MTR_2g426020 27.844 334 190 15 16 332 6 305 5.54e-25 105
MsG0480019270.01.T01 MTR_2g426060 26.344 372 218 16 16 362 6 346 1.14e-24 104
MsG0480019270.01.T01 MTR_3g013740 30.029 343 201 15 1 334 30 342 1.31e-24 104
MsG0480019270.01.T01 MTR_3g014540 30.816 331 173 17 16 334 29 315 1.24e-23 100
MsG0480019270.01.T01 MTR_5g096070 40.385 156 58 5 2 152 12 137 1.42e-23 95.9
MsG0480019270.01.T01 MTR_2g028110 29.201 363 202 20 16 362 4 327 1.49e-23 100
MsG0480019270.01.T01 MTR_3g011100 29.814 322 194 11 16 335 235 526 1.53e-23 102
MsG0480019270.01.T01 MTR_2g031720 26.331 338 213 10 11 343 1 307 2.28e-23 100
MsG0480019270.01.T01 MTR_6g087660 64.935 77 27 0 2 78 4 80 2.40e-23 96.3
MsG0480019270.01.T01 MTR_4g070550 26.087 368 220 14 16 358 5 345 2.78e-23 100
MsG0480019270.01.T01 MTR_2g425980 25.600 375 209 13 16 358 5 341 3.36e-23 100
MsG0480019270.01.T01 MTR_7g407070 29.129 333 195 14 16 334 32 337 6.03e-23 99.4
MsG0480019270.01.T01 MTR_2g025420 25.414 362 211 14 11 344 1 331 8.01e-23 99.4
MsG0480019270.01.T01 MTR_2g026010 27.322 366 204 15 16 360 4 328 3.13e-22 97.4
MsG0480019270.01.T01 MTR_7g101200 35.319 235 109 12 128 356 31 228 4.28e-22 94.0
MsG0480019270.01.T01 MTR_2g031640 26.225 347 210 13 16 351 6 317 4.66e-22 96.7
MsG0480019270.01.T01 MTR_5g097660 56.962 79 33 1 283 360 3 81 5.78e-22 90.5
MsG0480019270.01.T01 MTR_2g025960 29.412 221 128 10 122 334 15 215 1.15e-21 94.4
MsG0480019270.01.T01 MTR_5g096050 48.148 108 47 1 243 341 1 108 1.97e-21 89.0
MsG0480019270.01.T01 MTR_3g009240 29.231 325 182 16 16 335 36 317 3.72e-21 94.0
MsG0480019270.01.T01 MTR_5g091150 35.233 193 79 6 113 305 38 184 3.78e-21 90.5
MsG0480019270.01.T01 MTR_3g006670 29.412 323 189 12 16 334 49 336 4.87e-21 94.0
MsG0480019270.01.T01 MTR_3g047580 38.194 144 69 3 6 149 4 127 7.29e-21 87.4
MsG0480019270.01.T01 MTR_3g014570 29.268 328 184 17 16 335 29 316 9.21e-21 92.8
MsG0480019270.01.T01 MTR_1g047080 33.333 276 130 15 53 316 1 234 1.35e-20 90.9
MsG0480019270.01.T01 MTR_3g019290 35.135 222 93 10 4 218 1 178 1.37e-20 88.6
MsG0480019270.01.T01 MTR_5g057790 25.970 335 182 10 16 334 46 330 1.60e-20 92.4
MsG0480019270.01.T01 MTR_6g065980 29.661 354 183 21 16 362 16 310 1.78e-20 91.7
MsG0480019270.01.T01 MTR_2g021150 27.324 355 207 17 15 355 13 330 2.03e-20 91.7
MsG0480019270.01.T01 MTR_5g086780 50.538 93 46 0 270 362 123 215 2.05e-20 89.4
MsG0480019270.01.T01 MTR_2g031680 25.513 341 207 13 11 344 1 301 2.37e-20 91.7
MsG0480019270.01.T01 MTR_5g011200 26.829 369 216 17 1 358 1 326 1.67e-19 89.4
MsG0480019270.01.T01 MTR_2g029990 25.982 331 204 13 17 342 52 346 1.76e-19 89.4
MsG0480019270.01.T01 MTR_3g024130 28.674 279 160 11 67 337 6 253 2.31e-19 88.2
MsG0480019270.01.T01 MTR_4g023080 26.586 331 193 14 9 335 2 286 1.17e-18 86.7
MsG0480019270.01.T01 MTR_4g023090 26.471 340 207 15 1 335 2 303 1.22e-18 86.7
MsG0480019270.01.T01 MTR_4g117780 26.667 375 206 17 7 358 2 330 1.47e-18 86.3
MsG0480019270.01.T01 MTR_4g021785 27.147 361 197 16 15 361 8 316 1.86e-18 85.9
MsG0480019270.01.T01 MTR_3g013770 28.367 349 201 17 12 353 29 335 2.23e-18 85.9
MsG0480019270.01.T01 MTR_2g022020 45.238 84 46 0 278 361 1 84 3.40e-18 79.7
MsG0480019270.01.T01 MTR_2g024100 26.471 340 200 13 31 350 22 331 4.00e-18 85.5
MsG0480019270.01.T01 MTR_4g116330 25.876 371 215 15 4 356 11 339 4.55e-18 85.1
MsG0480019270.01.T01 MTR_3g436150 27.864 323 208 10 16 335 32 332 5.78e-18 84.7
MsG0480019270.01.T01 MTR_5g036250 61.194 67 26 0 295 361 8 74 6.18e-18 81.3
MsG0480019270.01.T01 MTR_3g009310 25.076 331 201 13 16 341 42 330 1.23e-17 84.0
MsG0480019270.01.T01 MTR_8g099460 26.866 335 197 15 13 334 2 301 1.51e-17 83.6
MsG0480019270.01.T01 MTR_4g117850 25.556 360 213 12 15 358 22 342 2.22e-17 82.8
MsG0480019270.01.T01 MTR_4g055060 27.492 331 197 15 16 338 30 325 2.30e-17 83.2
MsG0480019270.01.T01 MTR_4g117770 26.133 375 208 15 7 358 2 330 8.54e-17 81.3
MsG0480019270.01.T01 MTR_4g117810 26.133 375 208 15 7 358 2 330 8.54e-17 81.3
MsG0480019270.01.T01 MTR_5g070088 26.163 344 203 13 12 335 3 315 1.48e-16 80.5
MsG0480019270.01.T01 MTR_3g011060 29.042 334 185 18 16 334 28 324 1.54e-16 80.5
MsG0480019270.01.T01 MTR_8g041440 57.971 69 27 1 13 81 12 78 2.32e-16 74.7
MsG0480019270.01.T01 MTR_5g070080 25.459 381 209 18 15 359 9 350 2.77e-16 79.7
MsG0480019270.01.T01 MTR_4g061340 25.455 330 197 14 16 335 26 316 2.92e-16 79.7
MsG0480019270.01.T01 MTR_2g055970 25.513 341 197 10 6 334 201 496 5.10e-16 79.7
MsG0480019270.01.T01 MTR_7g070440 27.273 363 190 16 14 346 5 323 6.26e-16 78.6
MsG0480019270.01.T01 MTR_3g007360 25.648 347 201 16 24 354 60 365 6.64e-16 79.0
MsG0480019270.01.T01 MTR_2g031700 25.843 267 157 11 11 273 1 230 7.37e-16 77.4
MsG0480019270.01.T01 MTR_4g116340 28.788 264 133 8 1 255 21 238 8.77e-16 76.6
MsG0480019270.01.T01 MTR_1g097560 24.286 350 209 16 11 353 31 331 8.84e-16 78.2
MsG0480019270.01.T01 MTR_3g007270 25.904 332 200 12 16 335 47 344 9.23e-16 78.6
MsG0480019270.01.T01 MTR_0128s0070 28.319 339 181 18 16 332 22 320 9.83e-16 78.2
MsG0480019270.01.T01 MTR_2g021190 25.538 325 199 14 16 334 21 308 1.03e-15 78.2
MsG0480019270.01.T01 MTR_2g047832 24.576 354 206 18 15 343 28 345 1.16e-15 78.2
MsG0480019270.01.T01 MTR_3g006570 25.348 359 206 15 16 362 21 329 1.19e-15 77.8
MsG0480019270.01.T01 MTR_3g007410 24.595 370 209 16 2 341 24 353 1.49e-15 77.8
MsG0480019270.01.T01 MTR_3g103020 25.843 356 218 15 15 361 19 337 1.56e-15 77.4
MsG0480019270.01.T01 MTR_8g467140 25.455 330 203 11 10 334 26 317 1.68e-15 77.0
MsG0480019270.01.T01 MTR_2g046920 24.629 337 196 14 15 340 23 312 2.25e-15 77.0
MsG0480019270.01.T01 MTR_8g101580 26.364 330 188 14 16 334 45 330 2.68e-15 77.0
MsG0480019270.01.T01 MTR_2g046830 23.894 339 207 15 15 343 24 321 3.17e-15 76.6
MsG0480019270.01.T01 MTR_1g009110 24.069 349 220 12 1 337 1 316 3.56e-15 76.6
MsG0480019270.01.T01 MTR_4g094365 26.687 326 195 12 15 334 7 294 4.99e-15 75.9
MsG0480019270.01.T01 MTR_0128s0020 25.916 382 204 21 16 360 18 357 5.21e-15 76.3
MsG0480019270.01.T01 MTR_3g007330 24.398 332 204 13 16 343 48 336 6.75e-15 75.9
MsG0480019270.01.T01 MTR_3g010390 26.027 365 216 15 16 362 33 361 6.91e-15 75.9
MsG0480019270.01.T01 MTR_6g046320 27.714 350 206 12 16 332 39 374 7.11e-15 75.9
MsG0480019270.01.T01 MTR_5g070130 24.412 340 205 14 10 335 5 306 8.68e-15 75.5
MsG0480019270.01.T01 MTR_3g034130 26.239 343 187 15 15 335 8 306 1.24e-14 74.7
MsG0480019270.01.T01 MTR_7g066000 24.863 366 234 12 13 363 22 361 1.52e-14 74.7
MsG0480019270.01.T01 MTR_3g034160 25.000 340 207 13 9 335 2 306 2.08e-14 74.3
MsG0480019270.01.T01 MTR_3g034180 25.364 343 206 14 7 335 114 420 2.11e-14 74.7
MsG0480019270.01.T01 MTR_3g007430 24.204 314 199 11 24 334 51 328 2.13e-14 74.3
MsG0480019270.01.T01 MTR_7g077070 27.049 366 210 15 1 334 1 341 2.26e-14 74.3
MsG0480019270.01.T01 MTR_3g030350 24.923 325 197 13 16 335 35 317 3.06e-14 73.6
MsG0480019270.01.T01 MTR_0627s0010 26.074 349 208 15 16 337 38 363 3.75e-14 73.6
MsG0480019270.01.T01 MTR_1g050305 60.294 68 22 2 300 362 21 88 3.80e-14 69.3
MsG0480019270.01.T01 MTR_4g006270 23.333 330 183 13 16 334 4 274 3.95e-14 73.6
MsG0480019270.01.T01 MTR_3g030330 27.640 322 185 15 16 334 20 296 5.06e-14 72.8
MsG0480019270.01.T01 MTR_4g109270 25.970 335 183 19 16 334 8 293 5.12e-14 72.8
MsG0480019270.01.T01 MTR_3g009260 27.187 320 186 16 19 335 44 319 5.56e-14 72.8
MsG0480019270.01.T01 MTR_4g031770 25.155 322 200 11 14 331 2 286 5.88e-14 72.8
MsG0480019270.01.T01 MTR_4g023440 30.268 261 141 14 1 255 2 227 8.32e-14 72.0
MsG0480019270.01.T01 MTR_1g054725 26.393 341 206 15 1 331 2 307 8.50e-14 72.4
MsG0480019270.01.T01 MTR_0044s0300 23.861 373 227 14 3 362 15 343 8.75e-14 72.4
MsG0480019270.01.T01 MTR_5g057020 26.087 322 183 11 16 334 46 315 9.24e-14 72.0
MsG0480019270.01.T01 MTR_5g069760 24.638 345 196 11 11 335 1 301 9.51e-14 72.0
MsG0480019270.01.T01 MTR_2g078900 25.278 360 201 17 16 362 33 337 9.98e-14 72.0
MsG0480019270.01.T01 MTR_6g060650 26.316 361 220 15 15 359 7 337 1.11e-13 72.0
MsG0480019270.01.T01 MTR_5g046300 27.301 326 186 16 16 335 4 284 1.17e-13 71.6
MsG0480019270.01.T01 MTR_5g046290 27.301 326 186 16 16 335 4 284 1.17e-13 71.6
MsG0480019270.01.T01 MTR_1g055070 24.260 338 192 13 4 331 37 320 1.34e-13 71.6
MsG0480019270.01.T01 MTR_2g461450 23.577 369 221 14 11 361 13 338 1.46e-13 71.6
MsG0480019270.01.T01 MTR_1g023400 22.449 343 216 12 19 351 6 308 1.72e-13 71.2
MsG0480019270.01.T01 MTR_2g046900 24.096 332 212 13 15 340 27 324 1.73e-13 71.6
MsG0480019270.01.T01 MTR_4g023120 23.839 323 206 14 16 334 3 289 1.87e-13 71.2
MsG0480019270.01.T01 MTR_7g055930 25.135 370 192 13 18 338 15 348 2.06e-13 71.2
MsG0480019270.01.T01 MTR_5g097210 24.513 359 212 14 9 350 2 318 2.17e-13 71.2
MsG0480019270.01.T01 MTR_4g116330 28.077 260 143 12 4 255 11 234 4.09e-13 70.1
MsG0480019270.01.T01 MTR_6g027910 25.140 358 215 16 19 362 12 330 4.18e-13 70.1
MsG0480019270.01.T01 MTR_4g023070 24.224 322 206 14 16 334 3 289 5.31e-13 69.7
MsG0480019270.01.T01 MTR_4g109280 26.836 354 196 14 15 351 7 314 5.57e-13 69.7
MsG0480019270.01.T01 MTR_0760s0010 25.484 310 186 11 24 332 55 320 6.31e-13 69.7
MsG0480019270.01.T01 MTR_8g073550 26.977 215 128 8 15 227 29 216 6.58e-13 68.2
MsG0480019270.01.T01 MTR_3g047540 46.067 89 37 4 211 298 5 83 7.14e-13 64.3
MsG0480019270.01.T01 MTR_1g054575 24.012 329 191 12 16 334 52 331 9.63e-13 69.7
MsG0480019270.01.T01 MTR_5g057690 25.000 324 189 12 16 334 46 320 9.73e-13 69.3
MsG0480019270.01.T01 MTR_4g118380 25.587 383 208 16 15 360 7 349 1.06e-12 68.9
MsG0480019270.01.T01 MTR_6g055210 23.706 367 214 12 1 334 1 334 1.62e-12 68.9
MsG0480019270.01.T01 MTR_1g015730 25.664 339 206 16 9 335 2 306 1.67e-12 68.6
MsG0480019270.01.T01 MTR_4g117430 31.677 161 78 6 136 293 14 145 1.89e-12 65.1
MsG0480019270.01.T01 MTR_2g046800 24.069 349 200 12 16 334 14 327 2.13e-12 68.2
MsG0480019270.01.T01 MTR_2g021210 26.608 342 190 16 2 334 71 360 2.16e-12 68.2
MsG0480019270.01.T01 MTR_4g122850 28.869 336 195 17 27 352 12 313 3.92e-12 67.4
MsG0480019270.01.T01 MTR_5g069930 23.743 358 188 14 11 335 1 306 3.98e-12 67.4
MsG0480019270.01.T01 MTR_3g024150 24.852 338 181 13 19 338 38 320 4.38e-12 67.0
MsG0480019270.01.T01 MTR_8g013010 28.571 259 152 12 15 269 53 282 4.78e-12 66.6
MsG0480019270.01.T01 MTR_3g024110 24.650 357 203 18 16 362 101 401 5.14e-12 67.4
MsG0480019270.01.T01 MTR_3g058470 24.012 329 178 12 16 334 37 303 5.48e-12 67.0
MsG0480019270.01.T01 MTR_3g009300 25.207 242 142 12 103 335 78 289 8.54e-12 66.2
MsG0480019270.01.T01 MTR_7g055870 25.070 355 211 14 18 338 15 348 1.29e-11 65.9
MsG0480019270.01.T01 MTR_4g117750 25.745 369 197 17 15 356 2 320 1.44e-11 65.9
MsG0480019270.01.T01 MTR_6g048140 24.069 349 205 16 1 334 24 327 1.59e-11 65.5
MsG0480019270.01.T01 MTR_0115s0020 24.138 348 224 15 11 340 5 330 1.66e-11 65.5
MsG0480019270.01.T01 MTR_2g078850 24.363 353 210 15 19 362 33 337 1.95e-11 65.1
MsG0480019270.01.T01 MTR_1g056710 24.269 342 199 14 3 331 21 315 1.96e-11 65.1
MsG0480019270.01.T01 MTR_3g010430 23.936 376 222 16 1 362 21 346 2.24e-11 65.1
MsG0480019270.01.T01 MTR_4g030090 24.865 370 211 17 1 344 1 329 3.32e-11 64.7
MsG0480019270.01.T01 MTR_7g057270 24.576 354 197 17 14 335 24 339 3.92e-11 64.3
MsG0480019270.01.T01 MTR_1g097490 24.036 337 210 13 2 334 35 329 4.46e-11 64.3
MsG0480019270.01.T01 MTR_4g023130 26.238 202 114 7 136 335 77 245 5.38e-11 63.5
MsG0480019270.01.T01 MTR_4g013180 24.286 350 201 13 12 335 7 318 5.61e-11 63.9
MsG0480019270.01.T01 MTR_4g019990 22.857 350 212 13 11 335 1 317 5.94e-11 63.9
MsG0480019270.01.T01 MTR_3g097190 60.465 43 17 0 319 361 28 70 6.62e-11 61.2
MsG0480019270.01.T01 MTR_5g007610 26.506 332 197 17 16 335 41 337 6.99e-11 63.5
MsG0480019270.01.T01 MTR_5g057643 26.702 191 93 5 16 191 46 204 7.19e-11 62.4
MsG0480019270.01.T01 MTR_6g053240 24.471 331 200 13 16 334 28 320 8.81e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019270.01.T01 AT3G06240 26.087 368 204 18 2 333 22 357 2.84e-15 77.0

Find 84 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCCATCATGATCATATT+TGG 0.126593 4:-17501072 MsG0480019270.01.T01:CDS
TAAGTTTCACATATCAATTT+TGG 0.167479 4:-17500513 MsG0480019270.01.T01:CDS
GATTTGGTTACGATGATCTT+AGG 0.252720 4:-17500916 MsG0480019270.01.T01:CDS
AATCGCTTAATAGATTTAAT+AGG 0.262034 4:+17501364 None:intergenic
CACCTCATTGCTCAAGTAAA+AGG 0.275168 4:+17500655 None:intergenic
TCTCCATCATGATCATATTT+GGG 0.286473 4:-17501071 MsG0480019270.01.T01:CDS
TCAATACATGCCAAGGAAAA+AGG 0.297261 4:+17500761 None:intergenic
ATATGTCTTTAGACCCATTC+TGG 0.297642 4:-17500835 MsG0480019270.01.T01:CDS
TTTGGGTGAATATGGTATAA+AGG 0.303013 4:-17500495 MsG0480019270.01.T01:CDS
TACCAAGTTCTAAATCCTTT+AGG 0.312581 4:+17501221 None:intergenic
CTCCTAAAGGATTTAGAACT+TGG 0.336044 4:-17501223 MsG0480019270.01.T01:CDS
GTAAGAAAATGCTCCACATT+TGG 0.347305 4:+17500965 None:intergenic
AATAGGCAATTTAGATAGAA+TGG 0.360830 4:+17501381 None:intergenic
TCACCCGGGGTGGGAGGAAT+GGG 0.369646 4:+17501007 None:intergenic
TAAGAAAATGCTCCACATTT+GGG 0.385280 4:+17500966 None:intergenic
TTCCCTGGAGGGACCATGTT+TGG 0.387285 4:-17500681 MsG0480019270.01.T01:CDS
AAATTGTAGGGGTTTGCATA+TGG 0.388917 4:+17501133 None:intergenic
CTCACCCGGGGTGGGAGGAA+TGG 0.388956 4:+17501006 None:intergenic
GGCTTTATTGCATGGGTCGA+TGG 0.395570 4:+17501028 None:intergenic
ATTTGTTATGTATCTCTTAG+TGG 0.398567 4:-17500878 MsG0480019270.01.T01:CDS
AGTGGTGAACATGCTGGCTT+TGG 0.404095 4:-17500860 MsG0480019270.01.T01:CDS
ACATGGATGGTGTGTGTCAT+TGG 0.405799 4:-17500724 MsG0480019270.01.T01:CDS
ATAAACTTGGCGGTGTTAAA+CGG 0.415706 4:-17500572 MsG0480019270.01.T01:CDS
GAAACAATCATCTAAGTATG+AGG 0.424019 4:+17500613 None:intergenic
TAAACTTGGCGGTGTTAAAC+GGG 0.426490 4:-17500571 MsG0480019270.01.T01:CDS
AAGGAGAAATATTCTTCATC+AGG 0.428216 4:-17500403 MsG0480019270.01.T01:CDS
TGGACCAAACTCTTCATTGT+TGG 0.433176 4:-17500467 MsG0480019270.01.T01:CDS
TTGAATGTGTTCGCAAATCA+TGG 0.436898 4:-17501342 MsG0480019270.01.T01:CDS
CGGTCCAACAATGAAGAGTT+TGG 0.457196 4:+17500463 None:intergenic
CCCGGGTGAGTTAGTTGAGT+CGG 0.472512 4:-17500993 MsG0480019270.01.T01:CDS
AGCTATATCATCAGGTATAT+AGG 0.477431 4:+17501408 None:intergenic
GAGGAATGGGCTTTATTGCA+TGG 0.477466 4:+17501020 None:intergenic
TATGTCTTTAGACCCATTCT+GGG 0.492651 4:-17500834 MsG0480019270.01.T01:CDS
ATACCAAACATGGTCCCTCC+AGG 0.493452 4:+17500678 None:intergenic
AATATGGTATAAAGGAATCA+TGG 0.495415 4:-17500487 MsG0480019270.01.T01:CDS
AGCTATATATCTCCCAGAAT+GGG 0.495901 4:+17500822 None:intergenic
ATGGAGAAAGCTATATCATC+AGG 0.495959 4:+17501400 None:intergenic
ACCGATGTGCTTATTACGAC+GGG 0.499827 4:-17501255 MsG0480019270.01.T01:CDS
GCTTTATTGCATGGGTCGAT+GGG 0.503710 4:+17501029 None:intergenic
CCGGGTGAGTTAGTTGAGTC+GGG 0.504646 4:-17500992 MsG0480019270.01.T01:CDS
TGCCCCAAATATGATCATGA+TGG 0.509238 4:+17501068 None:intergenic
AAGCTATATATCTCCCAGAA+TGG 0.515315 4:+17500821 None:intergenic
CGGGGTATCTCTGCTCCTAA+AGG 0.516444 4:-17501236 MsG0480019270.01.T01:CDS
CCCGACTCAACTAACTCACC+CGG 0.521360 4:+17500992 None:intergenic
TCTTGCATTGAGCGTCCTAT+CGG 0.526101 4:-17500437 MsG0480019270.01.T01:CDS
CACATTGTGGATAAACTTGG+CGG 0.527600 4:-17500582 MsG0480019270.01.T01:CDS
TCTCTTAGTGGTGAACATGC+TGG 0.529024 4:-17500866 MsG0480019270.01.T01:CDS
TCACACATTGTGGATAAACT+TGG 0.530727 4:-17500585 MsG0480019270.01.T01:CDS
TTTGCGGCCACTGACTCCAT+CGG 0.533316 4:+17501451 None:intergenic
TTTGGGGCAAAATTATATTG+TGG 0.536407 4:-17501054 MsG0480019270.01.T01:CDS
GGATGGTGTGTGTCATTGGT+TGG 0.537596 4:-17500720 MsG0480019270.01.T01:CDS
AGGAATGGGCTTTATTGCAT+GGG 0.552998 4:+17501021 None:intergenic
AAGCCCATTCCTCCCACCCC+GGG 0.554120 4:-17501010 MsG0480019270.01.T01:CDS
CCTTTCGTACCCACTCCGAT+AGG 0.554600 4:+17500422 None:intergenic
CACCGATGTGCTTATTACGA+CGG 0.566273 4:-17501256 MsG0480019270.01.T01:CDS
ATAGCTTAAGAACTGACTCA+TGG 0.568318 4:-17500805 MsG0480019270.01.T01:CDS
ATGATATGAGATCAATGCAA+TGG 0.569695 4:+17500547 None:intergenic
TGACGGCACTCAAGTCTACA+TGG 0.573911 4:-17500741 MsG0480019270.01.T01:CDS
CTCAACTAACTCACCCGGGG+TGG 0.583385 4:+17500997 None:intergenic
GTTTCGATCTTCACACATTG+TGG 0.584359 4:-17500595 MsG0480019270.01.T01:CDS
CTCCATCATGATCATATTTG+GGG 0.585563 4:-17501070 MsG0480019270.01.T01:CDS
AAACAATCATCTAAGTATGA+GGG 0.586128 4:+17500614 None:intergenic
TCAACTAACTCACCCGGGGT+GGG 0.589686 4:+17500998 None:intergenic
CCTATCGGAGTGGGTACGAA+AGG 0.593348 4:-17500422 MsG0480019270.01.T01:CDS
ACTAACTCACCCGGGGTGGG+AGG 0.600862 4:+17501001 None:intergenic
TGAAGAAGTTGATGATTCCC+TGG 0.604273 4:-17500696 MsG0480019270.01.T01:CDS
AGTGCCGTCAATACATGCCA+AGG 0.609286 4:+17500754 None:intergenic
AAAGCCCATTCCTCCCACCC+CGG 0.611077 4:-17501011 MsG0480019270.01.T01:CDS
GAAGTTGATGATTCCCTGGA+GGG 0.611614 4:-17500692 MsG0480019270.01.T01:CDS
ATTGAGCGTCCTATCGGAGT+GGG 0.614003 4:-17500431 MsG0480019270.01.T01:CDS
TACCAAACATGGTCCCTCCA+GGG 0.617557 4:+17500679 None:intergenic
CATTGAGCGTCCTATCGGAG+TGG 0.620645 4:-17500432 MsG0480019270.01.T01:CDS
CCGACTCAACTAACTCACCC+GGG 0.622471 4:+17500993 None:intergenic
GGCACTCAAGTCTACATGGA+TGG 0.624237 4:-17500737 MsG0480019270.01.T01:CDS
ACAACAGCCGATGGAGTCAG+TGG 0.643515 4:-17501458 None:intergenic
TGAGTCGGGTATCCCAAATG+TGG 0.653600 4:-17500978 MsG0480019270.01.T01:CDS
TATATCATCAGGTATATAGG+TGG 0.666664 4:+17501411 None:intergenic
AAGTAAAAGGATACCAAACA+TGG 0.678525 4:+17500668 None:intergenic
CGACTCAACTAACTCACCCG+GGG 0.683977 4:+17500994 None:intergenic
GCTTAAGAACTGACTCATGG+AGG 0.692207 4:-17500802 MsG0480019270.01.T01:CDS
CCCCGTCGTAATAAGCACAT+CGG 0.697076 4:+17501254 None:intergenic
AGAAGTTGATGATTCCCTGG+AGG 0.701757 4:-17500693 MsG0480019270.01.T01:CDS
CCGATGTGCTTATTACGACG+GGG 0.716721 4:-17501254 MsG0480019270.01.T01:CDS
GGACGCTCAATGCAAGACAA+CGG 0.720578 4:+17500443 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCGCTTAATAGATTTAAT+AGG + Chr4:17500466-17500485 None:intergenic 20.0%
!!! AAGTTTCACATATCAATTTT+GGG - Chr4:17501315-17501334 MsG0480019270.01.T01:CDS 20.0%
!!! AATTTTCGTATTTTTGGTTT+TGG - Chr4:17500712-17500731 MsG0480019270.01.T01:CDS 20.0%
!!! TAAGTTTCACATATCAATTT+TGG - Chr4:17501314-17501333 MsG0480019270.01.T01:CDS 20.0%
! AAACAATCATCTAAGTATGA+GGG + Chr4:17501216-17501235 None:intergenic 25.0%
! AATAGGCAATTTAGATAGAA+TGG + Chr4:17500449-17500468 None:intergenic 25.0%
! AATATGGTATAAAGGAATCA+TGG - Chr4:17501340-17501359 MsG0480019270.01.T01:CDS 25.0%
! ACCAAAAATACGAAAATTGT+AGG + Chr4:17500710-17500729 None:intergenic 25.0%
! CAAAAATACGAAAATTGTAG+GGG + Chr4:17500708-17500727 None:intergenic 25.0%
! CCAAAAATACGAAAATTGTA+GGG + Chr4:17500709-17500728 None:intergenic 25.0%
!! AAACATTTTCATGAAACGAT+GGG + Chr4:17500527-17500546 None:intergenic 25.0%
!! GACGTTTTCTATTCTATTTT+TGG - Chr4:17500631-17500650 MsG0480019270.01.T01:CDS 25.0%
!!! ATATCAATTTTGGGTGAATA+TGG - Chr4:17501324-17501343 MsG0480019270.01.T01:CDS 25.0%
!!! ATTTGTTATGTATCTCTTAG+TGG - Chr4:17500949-17500968 MsG0480019270.01.T01:CDS 25.0%
!!! TCTATTCTATTTTTGGTGAA+GGG - Chr4:17500638-17500657 MsG0480019270.01.T01:CDS 25.0%
!!! TTCTATTCTATTTTTGGTGA+AGG - Chr4:17500637-17500656 MsG0480019270.01.T01:CDS 25.0%
!!! TTTGGTTTTGGTAGTATTAA+TGG - Chr4:17500724-17500743 MsG0480019270.01.T01:CDS 25.0%
AAGGAGAAATATTCTTCATC+AGG - Chr4:17501424-17501443 MsG0480019270.01.T01:CDS 30.0%
AAGTAAAAGGATACCAAACA+TGG + Chr4:17501162-17501181 None:intergenic 30.0%
AGCTATATCATCAGGTATAT+AGG + Chr4:17500422-17500441 None:intergenic 30.0%
ATGATATGAGATCAATGCAA+TGG + Chr4:17501283-17501302 None:intergenic 30.0%
GAAACAATCATCTAAGTATG+AGG + Chr4:17501217-17501236 None:intergenic 30.0%
TAAGAAAATGCTCCACATTT+GGG + Chr4:17500864-17500883 None:intergenic 30.0%
TATATCATCAGGTATATAGG+TGG + Chr4:17500419-17500438 None:intergenic 30.0%
TCTCCATCATGATCATATTT+GGG - Chr4:17500756-17500775 MsG0480019270.01.T01:CDS 30.0%
TTTGGGTGAATATGGTATAA+AGG - Chr4:17501332-17501351 MsG0480019270.01.T01:CDS 30.0%
! ACGTTTTATCTTCATGGATT+TGG - Chr4:17500895-17500914 MsG0480019270.01.T01:CDS 30.0%
! CATGATACGTTTTATCTTCA+TGG - Chr4:17500889-17500908 MsG0480019270.01.T01:CDS 30.0%
! CCCTACAATTTTCGTATTTT+TGG - Chr4:17500706-17500725 MsG0480019270.01.T01:CDS 30.0%
! GAAACATTTTCATGAAACGA+TGG + Chr4:17500528-17500547 None:intergenic 30.0%
! TTTGGGGCAAAATTATATTG+TGG - Chr4:17500773-17500792 MsG0480019270.01.T01:CDS 30.0%
!! TACCAAGTTCTAAATCCTTT+AGG + Chr4:17500609-17500628 None:intergenic 30.0%
AAATTGTAGGGGTTTGCATA+TGG + Chr4:17500697-17500716 None:intergenic 35.0%
AAGCTATATATCTCCCAGAA+TGG + Chr4:17501009-17501028 None:intergenic 35.0%
AGCTATATATCTCCCAGAAT+GGG + Chr4:17501008-17501027 None:intergenic 35.0%
ATATGTCTTTAGACCCATTC+TGG - Chr4:17500992-17501011 MsG0480019270.01.T01:CDS 35.0%
ATGGAGAAAGCTATATCATC+AGG + Chr4:17500430-17500449 None:intergenic 35.0%
CTCCATCATGATCATATTTG+GGG - Chr4:17500757-17500776 MsG0480019270.01.T01:CDS 35.0%
GTAAGAAAATGCTCCACATT+TGG + Chr4:17500865-17500884 None:intergenic 35.0%
GTCTCCATCATGATCATATT+TGG - Chr4:17500755-17500774 MsG0480019270.01.T01:CDS 35.0%
TATGTCTTTAGACCCATTCT+GGG - Chr4:17500993-17501012 MsG0480019270.01.T01:CDS 35.0%
TCAATACATGCCAAGGAAAA+AGG + Chr4:17501069-17501088 None:intergenic 35.0%
TCACACATTGTGGATAAACT+TGG - Chr4:17501242-17501261 MsG0480019270.01.T01:CDS 35.0%
TTGAATGTGTTCGCAAATCA+TGG - Chr4:17500485-17500504 MsG0480019270.01.T01:CDS 35.0%
! ATAAACTTGGCGGTGTTAAA+CGG - Chr4:17501255-17501274 MsG0480019270.01.T01:CDS 35.0%
! ATAGCTTAAGAACTGACTCA+TGG - Chr4:17501022-17501041 MsG0480019270.01.T01:CDS 35.0%
! ATCCTTTTACTTGAGCAATG+AGG - Chr4:17501170-17501189 MsG0480019270.01.T01:CDS 35.0%
! CTCCTAAAGGATTTAGAACT+TGG - Chr4:17500604-17500623 MsG0480019270.01.T01:CDS 35.0%
! GATTTGGTTACGATGATCTT+AGG - Chr4:17500911-17500930 MsG0480019270.01.T01:CDS 35.0%
! TTTTCCTTGGCATGTATTGA+CGG - Chr4:17501069-17501088 MsG0480019270.01.T01:CDS 35.0%
!!! GCTCACCTTTCTTTTTTTTG+CGG + Chr4:17500395-17500414 None:intergenic 35.0%
AGTGGCCGCAAAAAAAAGAA+AGG - Chr4:17500387-17500406 MsG0480019270.01.T01:CDS 40.0%
CACATTGTGGATAAACTTGG+CGG - Chr4:17501245-17501264 MsG0480019270.01.T01:CDS 40.0%
CACCTCATTGCTCAAGTAAA+AGG + Chr4:17501175-17501194 None:intergenic 40.0%
GTTTCGATCTTCACACATTG+TGG - Chr4:17501232-17501251 MsG0480019270.01.T01:CDS 40.0%
TGCCCCAAATATGATCATGA+TGG + Chr4:17500762-17500781 None:intergenic 40.0%
TGGACCAAACTCTTCATTGT+TGG - Chr4:17501360-17501379 MsG0480019270.01.T01:CDS 40.0%
! TAAACTTGGCGGTGTTAAAC+GGG - Chr4:17501256-17501275 MsG0480019270.01.T01:CDS 40.0%
! TGTTGACATGCCTTTTTCCT+TGG - Chr4:17501056-17501075 MsG0480019270.01.T01:CDS 40.0%
!! AGGAATGGGCTTTATTGCAT+GGG + Chr4:17500809-17500828 None:intergenic 40.0%
!! TGAAGAAGTTGATGATTCCC+TGG - Chr4:17501131-17501150 MsG0480019270.01.T01:CDS 40.0%
ACATGGATGGTGTGTGTCAT+TGG - Chr4:17501103-17501122 MsG0480019270.01.T01:CDS 45.0%
ACCGATGTGCTTATTACGAC+GGG - Chr4:17500572-17500591 MsG0480019270.01.T01:CDS 45.0%
CACCGATGTGCTTATTACGA+CGG - Chr4:17500571-17500590 MsG0480019270.01.T01:CDS 45.0%
CGGTCCAACAATGAAGAGTT+TGG + Chr4:17501367-17501386 None:intergenic 45.0%
TCTCTTAGTGGTGAACATGC+TGG - Chr4:17500961-17500980 MsG0480019270.01.T01:CDS 45.0%
TCTTGCATTGAGCGTCCTAT+CGG - Chr4:17501390-17501409 MsG0480019270.01.T01:CDS 45.0%
! GCTTAAGAACTGACTCATGG+AGG - Chr4:17501025-17501044 MsG0480019270.01.T01:CDS 45.0%
! GCTTTATTGCATGGGTCGAT+GGG + Chr4:17500801-17500820 None:intergenic 45.0%
!! AGAAGTTGATGATTCCCTGG+AGG - Chr4:17501134-17501153 MsG0480019270.01.T01:CDS 45.0%
!! GAAGTTGATGATTCCCTGGA+GGG - Chr4:17501135-17501154 MsG0480019270.01.T01:CDS 45.0%
!! GAGGAATGGGCTTTATTGCA+TGG + Chr4:17500810-17500829 None:intergenic 45.0%
AGTGCCGTCAATACATGCCA+AGG + Chr4:17501076-17501095 None:intergenic 50.0%
ATACCAAACATGGTCCCTCC+AGG + Chr4:17501152-17501171 None:intergenic 50.0%
ATTGAGCGTCCTATCGGAGT+GGG - Chr4:17501396-17501415 MsG0480019270.01.T01:CDS 50.0%
CCCCGTCGTAATAAGCACAT+CGG + Chr4:17500576-17500595 None:intergenic 50.0%
CCGATGTGCTTATTACGACG+GGG - Chr4:17500573-17500592 MsG0480019270.01.T01:CDS 50.0%
GGACGCTCAATGCAAGACAA+CGG + Chr4:17501387-17501406 None:intergenic 50.0%
GGCACTCAAGTCTACATGGA+TGG - Chr4:17501090-17501109 MsG0480019270.01.T01:CDS 50.0%
TACCAAACATGGTCCCTCCA+GGG + Chr4:17501151-17501170 None:intergenic 50.0%
TGACGGCACTCAAGTCTACA+TGG - Chr4:17501086-17501105 MsG0480019270.01.T01:CDS 50.0%
TGAGTCGGGTATCCCAAATG+TGG - Chr4:17500849-17500868 MsG0480019270.01.T01:CDS 50.0%
! GGATGGTGTGTGTCATTGGT+TGG - Chr4:17501107-17501126 MsG0480019270.01.T01:CDS 50.0%
!! AGTGGTGAACATGCTGGCTT+TGG - Chr4:17500967-17500986 MsG0480019270.01.T01:CDS 50.0%
!! GGCTTTATTGCATGGGTCGA+TGG + Chr4:17500802-17500821 None:intergenic 50.0%
CATTGAGCGTCCTATCGGAG+TGG - Chr4:17501395-17501414 MsG0480019270.01.T01:CDS 55.0%
CCCGACTCAACTAACTCACC+CGG + Chr4:17500838-17500857 None:intergenic 55.0%
CCCGGGTGAGTTAGTTGAGT+CGG - Chr4:17500834-17500853 MsG0480019270.01.T01:CDS 55.0%
CCGACTCAACTAACTCACCC+GGG + Chr4:17500837-17500856 None:intergenic 55.0%
CCGGGTGAGTTAGTTGAGTC+GGG - Chr4:17500835-17500854 MsG0480019270.01.T01:CDS 55.0%
CCTATCGGAGTGGGTACGAA+AGG - Chr4:17501405-17501424 MsG0480019270.01.T01:CDS 55.0%
CCTTTCGTACCCACTCCGAT+AGG + Chr4:17501408-17501427 None:intergenic 55.0%
CGACTCAACTAACTCACCCG+GGG + Chr4:17500836-17500855 None:intergenic 55.0%
TCAACTAACTCACCCGGGGT+GGG + Chr4:17500832-17500851 None:intergenic 55.0%
TTCCCTGGAGGGACCATGTT+TGG - Chr4:17501146-17501165 MsG0480019270.01.T01:CDS 55.0%
! CGGGGTATCTCTGCTCCTAA+AGG - Chr4:17500591-17500610 MsG0480019270.01.T01:CDS 55.0%
AAAGCCCATTCCTCCCACCC+CGG - Chr4:17500816-17500835 MsG0480019270.01.T01:CDS 60.0%
CTCAACTAACTCACCCGGGG+TGG + Chr4:17500833-17500852 None:intergenic 60.0%
AAGCCCATTCCTCCCACCCC+GGG - Chr4:17500817-17500836 MsG0480019270.01.T01:CDS 65.0%
ACTAACTCACCCGGGGTGGG+AGG + Chr4:17500829-17500848 None:intergenic 65.0%
TCACCCGGGGTGGGAGGAAT+GGG + Chr4:17500823-17500842 None:intergenic 65.0%
CTCACCCGGGGTGGGAGGAA+TGG + Chr4:17500824-17500843 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 17500379 17501470 17500379 ID=MsG0480019270.01;Name=MsG0480019270.01
Chr4 mRNA 17500379 17501470 17500379 ID=MsG0480019270.01.T01;Parent=MsG0480019270.01;Name=MsG0480019270.01.T01;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|363
Chr4 exon 17500379 17501470 17500379 ID=MsG0480019270.01.T01:exon:4583;Parent=MsG0480019270.01.T01
Chr4 CDS 17500379 17501470 17500379 ID=MsG0480019270.01.T01:cds;Parent=MsG0480019270.01.T01
Gene Sequence

>MsG0480019270.01.T01

ATGGAGTCAGTGGCCGCAAAAAAAAGAAAGGTGAGCACCACCTATATACCTGATGATATAGCTTTCTCCATTCTATCTAAATTGCCTATTAAATCTATTAAGCGATTTGAATGTGTTCGCAAATCATGGTCTCGCTTATCTAAGACCCATCGTTTCATGAAAATGTTTCGCAATAATCTCTTGTCTAATTCTCACCGATGTGCTTATTACGACGGGGTATCTCTGCTCCTAAAGGATTTAGAACTTGGTAATGACGTTTTCTATTCTATTTTTGGTGAAGGGTTTGAGAACAAAGTTAAATTAGATTTCTCAAATCCATATGCAAACCCCTACAATTTTCGTATTTTTGGTTTTGGTAGTATTAATGGCACACTTTGTCTCCATCATGATCATATTTGGGGCAAAATTATATTGTGGAACCCATCGACCCATGCAATAAAGCCCATTCCTCCCACCCCGGGTGAGTTAGTTGAGTCGGGTATCCCAAATGTGGAGCATTTTCTTACTATACATGATACGTTTTATCTTCATGGATTTGGTTACGATGATCTTAGGAATGACTATAATGTCATTTGTTATGTATCTCTTAGTGGTGAACATGCTGGCTTTGGAGATATGTCTTTAGACCCATTCTGGGAGATATATAGCTTAAGAACTGACTCATGGAGGATACTTGATGTTGACATGCCTTTTTCCTTGGCATGTATTGACGGCACTCAAGTCTACATGGATGGTGTGTGTCATTGGTTGGCTGAAGAAGTTGATGATTCCCTGGAGGGACCATGTTTGGTATCCTTTTACTTGAGCAATGAGGTGTTCTTCATAACATACATACCCTCATACTTAGATGATTGTTTCGATCTTCACACATTGTGGATAAACTTGGCGGTGTTAAACGGGTCCATTGCATTGATCTCATATCATGAAAAGACGACTAAGTTTCACATATCAATTTTGGGTGAATATGGTATAAAGGAATCATGGACCAAACTCTTCATTGTTGGACCGTTGTCTTGCATTGAGCGTCCTATCGGAGTGGGTACGAAAGGAGAAATATTCTTCATCAGGAAAGATAAAGAACTATTTTCTTGA
Protein sequence

>MsG0480019270.01.T01

MESVAAKKRKVSTTYIPDDIAFSILSKLPIKSIKRFECVRKSWSRLSKTHRFMKMFRNNLLSNSHRCAYYDGVSLLLKDLELGNDVFYSIFGEGFENKVKLDFSNPYANPYNFRIFGFGSINGTLCLHHDHIWGKIILWNPSTHAIKPIPPTPGELVESGIPNVEHFLTIHDTFYLHGFGYDDLRNDYNVICYVSLSGEHAGFGDMSLDPFWEIYSLRTDSWRILDVDMPFSLACIDGTQVYMDGVCHWLAEEVDDSLEGPCLVSFYLSNEVFFITYIPSYLDDCFDLHTLWINLAVLNGSIALISYHEKTTKFHISILGEYGIKESWTKLFIVGPLSCIERPIGVGTKGEIFFIRKDKELFS*