AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028714.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028714.01.T01 MTR_5g076490 80.593 371 32 3 54 423 1 332 0.0 567
MsG0580028714.01.T01 MTR_5g097680 61.187 438 140 9 1 423 1 423 2.35e-169 489
MsG0580028714.01.T01 MTR_5g064700 60.733 382 118 11 56 423 1 364 4.69e-141 414
MsG0580028714.01.T01 MTR_6g461660 54.801 427 156 11 2 424 4 397 5.60e-134 397
MsG0580028714.01.T01 MTR_6g086825 48.499 433 176 15 6 424 58 457 9.86e-113 345
MsG0580028714.01.T01 MTR_6g079770 47.806 433 196 11 1 423 1 413 9.80e-108 331
MsG0580028714.01.T01 MTR_6g090180 46.991 432 194 13 1 424 31 435 1.16e-107 331
MsG0580028714.01.T01 MTR_5g094350 59.736 303 80 6 13 309 9 275 8.13e-106 321
MsG0580028714.01.T01 MTR_0054s0090 46.420 433 193 12 1 424 1 403 2.08e-105 324
MsG0580028714.01.T01 MTR_6g079810 47.945 438 181 15 1 423 54 459 3.28e-105 326
MsG0580028714.01.T01 MTR_0054s0100 45.497 433 199 10 1 424 1 405 8.30e-105 323
MsG0580028714.01.T01 MTR_0134s0060 46.099 423 202 10 7 421 2 406 6.64e-104 321
MsG0580028714.01.T01 MTR_6g478230 44.176 455 172 15 1 424 1 404 8.76e-103 318
MsG0580028714.01.T01 MTR_5g097220 46.697 439 185 14 1 424 1 405 3.15e-100 311
MsG0580028714.01.T01 MTR_4g028510 45.455 440 173 18 6 423 4 398 6.90e-100 312
MsG0580028714.01.T01 MTR_6g080680 45.392 434 179 11 1 421 1 389 4.13e-98 305
MsG0580028714.01.T01 MTR_0129s0070 44.159 428 198 11 1 423 1 392 1.24e-97 304
MsG0580028714.01.T01 MTR_4g028680 45.116 430 187 15 6 423 4 396 1.96e-97 303
MsG0580028714.01.T01 MTR_2g038680 44.368 435 199 14 3 423 2 407 2.33e-97 304
MsG0580028714.01.T01 MTR_4g028660 43.387 431 194 15 6 424 4 396 5.33e-96 300
MsG0580028714.01.T01 MTR_4g027450 43.387 431 194 15 6 424 4 396 5.33e-96 300
MsG0580028714.01.T01 MTR_5g097330 44.860 428 193 12 7 424 6 400 9.73e-96 299
MsG0580028714.01.T01 MTR_2g022000 43.107 457 205 13 3 437 2 425 3.56e-94 296
MsG0580028714.01.T01 MTR_0129s0120 43.124 429 203 11 1 424 1 393 1.17e-93 294
MsG0580028714.01.T01 MTR_0129s0050 44.598 435 198 15 1 423 1 404 1.78e-93 293
MsG0580028714.01.T01 MTR_4g130330 44.125 417 193 13 14 423 4 387 7.60e-92 289
MsG0580028714.01.T01 MTR_2g021800 43.567 443 196 14 3 423 2 412 2.33e-91 288
MsG0580028714.01.T01 MTR_2g021950 42.694 438 191 15 1 423 1 393 2.47e-88 280
MsG0580028714.01.T01 MTR_4g117550 41.299 431 179 14 1 421 1 367 1.06e-87 277
MsG0580028714.01.T01 MTR_8g041270 44.780 431 183 15 11 423 9 402 1.19e-87 278
MsG0580028714.01.T01 MTR_6g090250 44.169 403 202 11 35 424 29 421 4.12e-87 278
MsG0580028714.01.T01 MTR_4g102410 43.084 441 195 14 1 423 44 446 1.09e-86 277
MsG0580028714.01.T01 MTR_8g063440 43.499 423 188 14 7 423 2 379 2.30e-86 274
MsG0580028714.01.T01 MTR_7g017040 43.418 433 191 14 4 423 3 394 4.51e-86 274
MsG0580028714.01.T01 MTR_2g021770 41.204 432 201 14 11 423 6 403 8.24e-85 271
MsG0580028714.01.T01 MTR_1g115205 54.296 291 72 7 1 288 17 249 9.89e-85 265
MsG0580028714.01.T01 MTR_5g069390 40.227 440 202 14 12 430 21 420 3.94e-84 272
MsG0580028714.01.T01 MTR_4g028750 41.849 411 189 13 10 408 8 380 1.09e-83 268
MsG0580028714.01.T01 MTR_4g055820 46.875 384 158 14 11 381 8 358 1.28e-83 266
MsG0580028714.01.T01 MTR_7g017130 40.920 435 198 14 3 423 4 393 1.21e-82 265
MsG0580028714.01.T01 MTR_8g012090 42.432 403 155 10 1 395 1 334 1.25e-82 263
MsG0580028714.01.T01 MTR_5g037680 41.435 432 177 16 12 421 3 380 2.59e-82 266
MsG0580028714.01.T01 MTR_2g034700 42.254 426 177 14 6 420 2 369 4.40e-82 263
MsG0580028714.01.T01 MTR_8g033140 40.980 449 200 17 1 421 1 412 7.61e-82 264
MsG0580028714.01.T01 MTR_3g011120 41.627 418 184 13 7 416 4 369 7.94e-82 262
MsG0580028714.01.T01 MTR_7g017170 40.359 446 197 15 3 423 4 405 1.12e-81 263
MsG0580028714.01.T01 MTR_8g064890 40.845 426 200 13 7 423 2 384 6.74e-81 260
MsG0580028714.01.T01 MTR_8g464770 42.180 422 178 13 12 421 7 374 1.36e-80 259
MsG0580028714.01.T01 MTR_4g014370 40.181 443 201 14 8 424 2 406 4.25e-80 259
MsG0580028714.01.T01 MTR_0831s0010 40.647 433 200 13 1 423 32 417 4.85e-80 259
MsG0580028714.01.T01 MTR_2g104340 41.882 425 203 12 7 423 4 392 7.14e-80 258
MsG0580028714.01.T01 MTR_8g046310 42.424 429 178 17 6 422 2 373 2.36e-78 253
MsG0580028714.01.T01 MTR_2g104280 40.367 436 193 15 12 423 9 401 4.17e-78 253
MsG0580028714.01.T01 MTR_5g059430 38.409 440 207 13 12 424 21 423 4.18e-78 254
MsG0580028714.01.T01 MTR_1g007450 41.304 414 199 14 9 413 4 382 5.13e-77 251
MsG0580028714.01.T01 MTR_2g066200 39.765 425 206 12 7 423 2 384 8.84e-77 249
MsG0580028714.01.T01 MTR_7g069550 41.509 424 193 16 11 419 8 391 6.66e-76 247
MsG0580028714.01.T01 MTR_8g467670 38.140 430 198 15 1 420 1 372 6.75e-75 244
MsG0580028714.01.T01 MTR_5g096910 41.026 429 196 14 7 423 6 389 7.52e-75 244
MsG0580028714.01.T01 MTR_8g033090 40.135 446 196 19 6 421 2 406 1.27e-74 244
MsG0580028714.01.T01 MTR_8g046200 39.246 451 213 17 7 427 3 422 1.18e-73 242
MsG0580028714.01.T01 MTR_5g092850 39.671 426 197 15 16 423 15 398 3.41e-73 241
MsG0580028714.01.T01 MTR_1g007410 40.000 435 202 17 1 419 7 398 3.89e-73 240
MsG0580028714.01.T01 MTR_2g066170 39.252 428 200 17 7 422 2 381 4.51e-73 239
MsG0580028714.01.T01 MTR_5g096630 39.374 447 212 16 1 424 1 411 1.25e-72 239
MsG0580028714.01.T01 MTR_8g046220 38.616 448 196 15 7 423 3 402 2.19e-72 238
MsG0580028714.01.T01 MTR_2g065840 38.391 435 199 13 7 423 2 385 3.60e-72 237
MsG0580028714.01.T01 MTR_1g053510 41.280 453 188 23 6 428 3 407 5.69e-72 238
MsG0580028714.01.T01 MTR_7g111700 41.014 434 172 16 1 423 1 361 7.94e-72 236
MsG0580028714.01.T01 MTR_6g078010 40.160 376 172 11 54 422 1 330 3.45e-71 233
MsG0580028714.01.T01 MTR_6g079790 42.687 335 154 10 95 422 1 304 5.23e-71 231
MsG0580028714.01.T01 MTR_8g018110 37.955 440 199 17 6 421 2 391 1.14e-70 234
MsG0580028714.01.T01 MTR_2g065860 37.500 432 206 10 7 423 2 384 1.47e-70 233
MsG0580028714.01.T01 MTR_5g074850 41.469 422 192 20 7 410 24 408 6.36e-70 244
MsG0580028714.01.T01 MTR_5g097350 40.091 439 193 16 1 424 1 384 1.14e-69 231
MsG0580028714.01.T01 MTR_5g091140 39.762 420 179 13 2 404 33 395 7.09e-69 229
MsG0580028714.01.T01 MTR_8g033110 38.938 452 202 20 6 424 2 412 3.29e-68 228
MsG0580028714.01.T01 MTR_6g087620 40.708 339 136 9 84 417 1 279 1.40e-67 221
MsG0580028714.01.T01 MTR_5g092860 39.633 381 172 12 35 405 20 352 3.90e-67 223
MsG0580028714.01.T01 MTR_5g024260 40.732 410 180 19 14 404 19 384 9.10e-67 224
MsG0580028714.01.T01 MTR_8g039500 39.950 403 170 15 7 395 2 346 1.37e-65 219
MsG0580028714.01.T01 MTR_1g098180 37.972 424 164 17 16 421 18 360 9.13e-65 217
MsG0580028714.01.T01 MTR_8g032980 37.336 458 201 20 6 421 2 415 5.17e-64 217
MsG0580028714.01.T01 MTR_7g104710 41.713 362 115 10 1 342 1 286 8.83e-64 213
MsG0580028714.01.T01 MTR_7g079640 39.474 418 177 17 6 408 2 358 2.79e-63 214
MsG0580028714.01.T01 MTR_8g064790 36.643 423 171 13 7 423 2 333 1.78e-62 210
MsG0580028714.01.T01 MTR_5g075370 38.875 409 195 19 14 403 5 377 2.35e-62 221
MsG0580028714.01.T01 MTR_2g066150 36.730 422 191 14 9 423 4 356 6.74e-62 209
MsG0580028714.01.T01 MTR_7g016930 40.000 360 153 12 4 358 3 304 1.62e-61 207
MsG0580028714.01.T01 MTR_4g007940 40.113 354 161 13 84 426 28 341 8.29e-61 206
MsG0580028714.01.T01 MTR_5g072060 40.049 407 168 16 16 405 5 352 1.02e-60 213
MsG0580028714.01.T01 MTR_6g090260 54.167 192 83 4 235 424 73 261 1.19e-60 202
MsG0580028714.01.T01 MTR_6g090260 69.565 69 18 2 1 66 1 69 7.23e-19 87.4
MsG0580028714.01.T01 MTR_1g007430 39.560 364 167 11 28 384 7 324 6.11e-60 203
MsG0580028714.01.T01 MTR_8g063330 37.789 389 186 12 7 381 2 348 7.26e-60 207
MsG0580028714.01.T01 MTR_8g036970 36.199 442 166 13 21 450 2 339 1.12e-59 204
MsG0580028714.01.T01 MTR_2g064950 38.208 424 199 18 11 418 4 380 8.32e-59 202
MsG0580028714.01.T01 MTR_5g022850 34.977 426 176 15 12 423 11 349 3.17e-58 199
MsG0580028714.01.T01 MTR_5g074800 39.474 380 170 17 56 419 1 336 1.17e-57 197
MsG0580028714.01.T01 MTR_5g043605 33.962 424 178 12 2 422 10 334 2.64e-56 194
MsG0580028714.01.T01 MTR_8g013000 40.204 393 171 16 12 384 5 353 7.04e-56 195
MsG0580028714.01.T01 MTR_7g023800 35.979 378 151 11 56 418 1 302 3.23e-55 190
MsG0580028714.01.T01 MTR_5g096900 40.997 361 147 12 7 350 2 313 5.68e-54 187
MsG0580028714.01.T01 MTR_2g021920 45.344 247 112 8 186 423 37 269 2.76e-51 178
MsG0580028714.01.T01 MTR_6g004450 46.091 243 102 9 186 424 49 266 6.06e-48 169
MsG0580028714.01.T01 MTR_8g063370 34.752 423 206 20 8 418 19 383 1.06e-47 172
MsG0580028714.01.T01 MTR_5g023970 48.768 203 92 6 224 424 1 193 6.64e-47 164
MsG0580028714.01.T01 MTR_8g063350 33.647 425 172 18 9 417 6 336 1.61e-45 165
MsG0580028714.01.T01 MTR_6g079730 57.143 147 59 3 279 424 4 147 4.00e-45 157
MsG0580028714.01.T01 MTR_5g086590 39.615 260 111 9 144 398 13 231 1.82e-44 159
MsG0580028714.01.T01 MTR_6g070880 41.199 267 129 10 1 259 15 261 2.97e-44 159
MsG0580028714.01.T01 MTR_6g071420 41.199 267 129 10 1 259 15 261 2.97e-44 159
MsG0580028714.01.T01 MTR_3g018750 41.502 253 117 9 185 423 2 237 6.98e-43 154
MsG0580028714.01.T01 MTR_6g465360 41.870 246 119 8 2 239 47 276 2.50e-42 154
MsG0580028714.01.T01 MTR_1g076810 38.652 282 119 11 1 269 1 241 1.48e-41 160
MsG0580028714.01.T01 MTR_8g033000 34.085 399 190 18 54 421 1 357 1.99e-41 154
MsG0580028714.01.T01 MTR_5g097850 48.936 188 81 5 242 423 63 241 4.08e-41 150
MsG0580028714.01.T01 MTR_3g030620 48.750 160 74 3 266 421 21 176 1.59e-40 145
MsG0580028714.01.T01 MTR_4g014370 43.256 215 104 6 215 424 133 334 8.53e-40 149
MsG0580028714.01.T01 MTR_4g014370 44.538 119 58 2 1 111 6 124 4.62e-20 92.4
MsG0580028714.01.T01 MTR_1g050312 34.835 333 138 13 84 408 16 277 1.78e-38 144
MsG0580028714.01.T01 MTR_5g068490 35.192 287 130 10 139 422 39 272 2.50e-38 143
MsG0580028714.01.T01 MTR_8g035690 37.037 297 133 11 150 421 30 297 6.96e-38 142
MsG0580028714.01.T01 MTR_8g063310 31.294 425 229 17 8 418 13 388 1.04e-36 142
MsG0580028714.01.T01 MTR_5g066420 49.032 155 67 5 268 416 1 149 2.86e-36 133
MsG0580028714.01.T01 MTR_4g016000 38.397 237 101 8 149 383 2 195 9.27e-36 134
MsG0580028714.01.T01 MTR_7g019250 32.733 333 150 10 158 486 206 468 2.97e-35 139
MsG0580028714.01.T01 MTR_2g104260 37.540 309 147 11 6 301 2 277 2.99e-35 134
MsG0580028714.01.T01 MTR_6g009350 42.233 206 97 8 187 389 9 195 4.99e-35 131
MsG0580028714.01.T01 MTR_1g050308 30.698 430 183 16 3 423 20 343 5.78e-35 135
MsG0580028714.01.T01 MTR_5g097820 35.430 302 137 12 8 293 10 269 6.22e-35 133
MsG0580028714.01.T01 MTR_5g098950 41.322 242 84 10 145 384 89 274 1.41e-34 132
MsG0580028714.01.T01 MTR_7g017150 44.949 198 98 7 230 424 75 264 4.69e-34 130
MsG0580028714.01.T01 MTR_5g037190 36.634 303 131 13 1 295 1 250 4.00e-33 127
MsG0580028714.01.T01 MTR_7g017120 39.574 235 129 8 195 424 37 263 5.26e-33 128
MsG0580028714.01.T01 MTR_1g054775 38.333 180 103 1 425 596 1030 1209 9.69e-33 135
MsG0580028714.01.T01 MTR_8g073570 38.384 198 86 7 7 197 2 170 1.17e-28 112
MsG0580028714.01.T01 MTR_5g097660 50.893 112 52 2 315 424 7 117 4.16e-27 106
MsG0580028714.01.T01 MTR_5g096920 41.139 158 81 5 268 423 1 148 3.84e-26 105
MsG0580028714.01.T01 MTR_2g022020 54.369 103 43 2 322 423 17 116 6.76e-26 103
MsG0580028714.01.T01 MTR_5g097650 41.420 169 70 6 8 168 9 156 7.90e-26 104
MsG0580028714.01.T01 MTR_5g097540 38.333 180 95 6 208 384 67 233 9.60e-25 105
MsG0580028714.01.T01 MTR_3g102690 30.588 170 107 2 433 591 16 185 3.30e-23 97.8
MsG0580028714.01.T01 MTR_5g036250 54.082 98 42 3 323 419 8 103 5.34e-23 97.1
MsG0580028714.01.T01 MTR_5g096070 41.358 162 56 5 6 164 15 140 1.99e-22 94.7
MsG0580028714.01.T01 MTR_3g019290 33.913 230 90 9 14 243 11 178 9.67e-22 93.2
MsG0580028714.01.T01 MTR_4g133170 24.479 384 223 16 20 396 7 330 9.88e-22 98.2
MsG0580028714.01.T01 MTR_1g047080 28.647 377 162 19 54 422 1 278 1.55e-20 92.8
MsG0580028714.01.T01 MTR_4g094400 48.113 106 42 2 266 360 8 111 1.66e-20 88.2
MsG0580028714.01.T01 MTR_2g437490 30.921 152 95 2 433 576 41 190 3.79e-20 89.4
MsG0580028714.01.T01 MTR_5g086780 44.538 119 63 2 285 402 112 228 5.39e-20 89.7
MsG0580028714.01.T01 MTR_5g086780 72.222 54 15 0 3 56 2 55 1.36e-15 77.0
MsG0580028714.01.T01 MTR_7g101200 33.065 248 101 13 144 383 38 228 7.24e-20 89.4
MsG0580028714.01.T01 MTR_2g031720 25.250 400 214 18 20 399 9 343 1.71e-19 91.3
MsG0580028714.01.T01 MTR_6g087660 63.291 79 22 2 1 72 1 79 8.91e-19 85.1
MsG0580028714.01.T01 MTR_7g079370 27.103 321 183 10 111 423 72 349 2.45e-18 87.4
MsG0580028714.01.T01 MTR_0667s0010 25.310 403 224 16 20 399 9 357 3.95e-18 87.4
MsG0580028714.01.T01 MTR_8g041440 61.429 70 23 1 9 74 7 76 4.53e-18 80.9
MsG0580028714.01.T01 MTR_2g028110 25.641 390 221 16 20 399 7 337 1.09e-17 85.9
MsG0580028714.01.T01 MTR_2g028130 25.307 407 229 17 20 399 8 366 1.62e-17 85.5
MsG0580028714.01.T01 MTR_2g425980 26.932 427 236 21 20 425 8 379 1.65e-17 85.5
MsG0580028714.01.T01 MTR_7g111367 27.607 163 99 4 387 533 31 190 8.01e-17 82.4
MsG0580028714.01.T01 MTR_5g091150 30.901 233 72 8 123 333 19 184 2.32e-16 78.6
MsG0580028714.01.T01 MTR_2g426070 26.396 394 221 20 25 399 14 357 2.68e-16 81.6
MsG0580028714.01.T01 MTR_3g047580 36.076 158 64 5 6 158 2 127 3.75e-16 75.5
MsG0580028714.01.T01 MTR_4g117850 23.150 419 236 12 20 423 26 373 6.43e-16 80.5
MsG0580028714.01.T01 MTR_5g096050 56.410 78 30 2 289 365 30 104 9.93e-16 74.3
MsG0580028714.01.T01 MTR_6g017295 31.159 138 87 1 423 552 410 547 1.07e-15 80.9
MsG0580028714.01.T01 MTR_2g426020 24.000 425 250 15 20 425 9 379 1.56e-15 79.3
MsG0580028714.01.T01 MTR_1g026690 31.061 132 83 1 434 557 57 188 1.78e-15 79.0
MsG0580028714.01.T01 MTR_3g083010 25.405 370 211 18 20 372 9 330 3.00e-15 78.6
MsG0580028714.01.T01 MTR_2g090750 31.579 133 83 1 433 557 309 441 8.89e-15 78.2
MsG0580028714.01.T01 MTR_1g068860 24.812 399 226 19 20 405 7 344 9.28e-15 76.6
MsG0580028714.01.T01 MTR_2g426090 25.707 389 227 22 25 399 14 354 1.27e-14 76.6
MsG0580028714.01.T01 MTR_8g442690 36.923 130 71 3 444 564 350 477 1.56e-14 77.0
MsG0580028714.01.T01 MTR_4g070550 25.735 408 232 17 20 403 8 368 1.67e-14 76.3
MsG0580028714.01.T01 MTR_0115s0020 25.115 434 244 20 20 423 13 395 1.94e-14 75.9
MsG0580028714.01.T01 MTR_2g028140 24.627 402 235 17 20 398 8 364 2.43e-14 75.9
MsG0580028714.01.T01 MTR_1g068875 25.255 392 217 19 20 399 7 334 3.77e-14 75.1
MsG0580028714.01.T01 MTR_1g055135 24.942 433 256 17 6 428 2 375 5.04e-14 74.3
MsG0580028714.01.T01 MTR_6g006375 27.517 149 96 3 452 591 57 202 5.19e-14 72.4
MsG0580028714.01.T01 MTR_7g073570 31.200 125 78 1 449 565 135 259 5.61e-14 74.3
MsG0580028714.01.T01 MTR_2g064455 31.707 164 104 3 434 596 41 197 8.88e-14 71.6
MsG0580028714.01.T01 MTR_1g009110 23.641 423 252 18 1 411 1 364 9.05e-14 73.9
MsG0580028714.01.T01 MTR_3g435820 31.933 119 73 1 455 565 11 129 1.49e-13 72.4
MsG0580028714.01.T01 MTR_3g047540 47.222 72 32 2 236 307 5 70 2.81e-13 66.2
MsG0580028714.01.T01 MTR_5g070130 23.934 422 259 14 9 423 3 369 5.27e-13 71.6
MsG0580028714.01.T01 MTR_2g021050 23.515 421 240 18 20 425 8 361 5.45e-13 71.2
MsG0580028714.01.T01 MTR_8g015630 30.952 126 79 1 423 540 53 178 7.33e-13 70.9
MsG0580028714.01.T01 MTR_8g433040 23.721 430 245 14 2 423 3 357 7.36e-13 70.9
MsG0580028714.01.T01 MTR_8g032380 23.721 430 245 14 2 423 3 357 7.36e-13 70.9
MsG0580028714.01.T01 MTR_2g025960 23.810 273 155 11 144 398 28 265 9.38e-13 70.1
MsG0580028714.01.T01 MTR_2g026010 26.115 314 182 16 127 424 88 367 9.61e-13 70.9
MsG0580028714.01.T01 MTR_5g048160 25.115 434 243 20 20 423 7 388 1.13e-12 70.5
MsG0580028714.01.T01 MTR_3g097190 51.852 54 25 1 347 399 28 81 1.92e-12 66.6
MsG0580028714.01.T01 MTR_6g060650 24.242 429 245 17 11 423 2 366 2.70e-12 69.3
MsG0580028714.01.T01 MTR_8g102520 25.087 287 163 11 145 423 73 315 1.06e-11 67.0
MsG0580028714.01.T01 MTR_2g031680 23.000 400 228 14 13 398 2 335 4.97e-11 65.5
MsG0580028714.01.T01 MTR_1g050305 45.783 83 39 2 328 404 21 103 7.86e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028714.01.T01 AT3G24255 32.609 138 84 2 433 562 26 162 9.19e-18 87.0
MsG0580028714.01.T01 AT3G24255 32.609 138 84 2 433 562 80 216 9.52e-18 87.0
MsG0580028714.01.T01 AT3G24255 32.609 138 84 2 433 562 80 216 9.52e-18 87.0
MsG0580028714.01.T01 AT3G24255 32.609 138 84 2 433 562 80 216 1.78e-17 87.0
MsG0580028714.01.T01 AT3G06240 23.448 435 245 18 20 421 39 418 1.03e-14 77.0
MsG0580028714.01.T01 AT3G24255 30.000 140 89 2 433 564 26 164 1.31e-14 77.8

Find 128 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGCGCACACATGACTTTA+AGG 0.159459 5:+85290791 MsG0580028714.01.T01:CDS
CTCTAAAAGGGAATCAAATT+TGG 0.181229 5:+85291064 MsG0580028714.01.T01:CDS
TGGATGTGGTAAATTTAATT+TGG 0.204224 5:-85290505 None:intergenic
CTTTGGTTCAAGGTGCTTAA+AGG 0.206323 5:+85292549 MsG0580028714.01.T01:CDS
GGAAAGAATTAACCGAATTA+TGG 0.213480 5:+85292637 MsG0580028714.01.T01:CDS
AAATTGAGAGAGCCTTTATC+TGG 0.265750 5:+85292370 MsG0580028714.01.T01:CDS
CACTCAAGTCGTCATGTTCA+TGG 0.270563 5:+85290756 MsG0580028714.01.T01:CDS
ATCTCTTCCAAACAACTCTT+TGG 0.301723 5:-85292342 None:intergenic
CAAACAACTCTTTGGCATCT+TGG 0.302651 5:-85292334 None:intergenic
CACCAAGGTCCTCAATCATT+TGG 0.303718 5:-85291403 None:intergenic
AGATATCATTAGAACCCTTC+TGG 0.304709 5:+85290907 MsG0580028714.01.T01:CDS
AGTCGTCATGTTCATGGATT+TGG 0.305947 5:+85290762 MsG0580028714.01.T01:CDS
TAACCTGATCTAAAACAAAT+TGG 0.305974 5:-85292230 None:intergenic
TCATGTGTCGATCGTCCTTT+TGG 0.309770 5:+85291314 MsG0580028714.01.T01:CDS
CGAAATTTAAAATTTCAAAA+TGG 0.310882 5:-85290554 None:intergenic
CCCAGTCCGCCAACATCTTC+AGG 0.320297 5:-85292450 None:intergenic
AATTAACCGAATTATGGATT+TGG 0.320385 5:+85292643 MsG0580028714.01.T01:CDS
GGTTAATTCTTTCCAAAGTC+TGG 0.333649 5:-85292628 None:intergenic
CTGATGCAAGATTTGCACTA+TGG 0.335709 5:+85290640 MsG0580028714.01.T01:CDS
CCTGAAGATGTTGGCGGACT+GGG 0.348435 5:+85292450 MsG0580028714.01.T01:CDS
ACAATGGAAAGAATGATCTT+TGG 0.348788 5:+85292532 MsG0580028714.01.T01:CDS
ATCTGTATCACCCCAGATAA+AGG 0.350971 5:-85292382 None:intergenic
AATCGCTTCAAAGATTTAAG+AGG 0.361742 5:-85290306 None:intergenic
GTTTCAGCTCCTTCTTGAAA+TGG 0.370719 5:-85290525 None:intergenic
GGTAATATCATCGTGTATAT+AGG 0.373242 5:-85290262 None:intergenic
AGAGACTTGGTGGTGTTAAA+TGG 0.382342 5:+85291179 MsG0580028714.01.T01:CDS
TTGTTTGTTGAAATTAGCTT+GGG 0.383700 5:+85292503 MsG0580028714.01.T01:CDS
ACCTGAAGATGTTGGCGGAC+TGG 0.386158 5:+85292449 MsG0580028714.01.T01:CDS
CACGGGGTATACCTGACATA+TGG 0.389731 5:+85290436 MsG0580028714.01.T01:CDS
TCCATCTATGTCCATGGGTA+TGG 0.393365 5:-85291126 None:intergenic
ATGTTGACTATAGGTGTTCA+TGG 0.400482 5:+85291156 MsG0580028714.01.T01:CDS
CTTGAATGGACTGTGTCATT+GGG 0.401379 5:+85291019 MsG0580028714.01.T01:CDS
CCCATACCCATGGACATAGA+TGG 0.402896 5:+85291125 MsG0580028714.01.T01:CDS
CAAGATGCCAAAGAGTTGTT+TGG 0.403946 5:+85292335 MsG0580028714.01.T01:CDS
GCGAAACCAAATCCATAATT+CGG 0.410245 5:-85292649 None:intergenic
ACTTGAATGGACTGTGTCAT+TGG 0.421413 5:+85291018 MsG0580028714.01.T01:CDS
TTCCAAAGTCTGGAGTTTGT+AGG 0.422989 5:-85292618 None:intergenic
GGAGTCTTGTATTCTTTGTC+CGG 0.425156 5:+85290462 MsG0580028714.01.T01:CDS
ACCTTGAATTCGTCCGTAGT+TGG 0.425217 5:-85290666 None:intergenic
AAGGAAAACCTTCTTCCAAT+TGG 0.426058 5:+85291467 MsG0580028714.01.T01:CDS
TGGATCAAACTCTTCATTGT+TGG 0.427783 5:+85291284 MsG0580028714.01.T01:CDS
ATAGTTTAAGAAGTAACTCT+TGG 0.445444 5:+85290937 MsG0580028714.01.T01:CDS
ACCAAGGTCCTCAATCATTT+GGG 0.448104 5:-85291402 None:intergenic
ATCCCATTCTCATATGTTGT+TGG 0.455496 5:-85290981 None:intergenic
AACCTACAAACTCCAGACTT+TGG 0.456227 5:+85292616 MsG0580028714.01.T01:CDS
CTTGTTTGTTGAAATTAGCT+TGG 0.456746 5:+85292502 MsG0580028714.01.T01:CDS
TTGTTCTTGATATGTGATCA+AGG 0.459685 5:-85291210 None:intergenic
CATAGTGCAAATCTTGCATC+AGG 0.461335 5:-85290639 None:intergenic
TTGCCCTTTCCCACTCCAAA+AGG 0.464318 5:-85291329 None:intergenic
CTAATTTCAACAAACAAGCT+TGG 0.467379 5:-85292497 None:intergenic
CATCAATAGAACGCTACAGC+TGG 0.468007 5:+85290883 MsG0580028714.01.T01:CDS
CGGACCATGTTCATGAAAAG+AGG 0.470721 5:-85290369 None:intergenic
TAAGGTACATGCAGTTCGTT+GGG 0.476867 5:+85292413 MsG0580028714.01.T01:CDS
AAAGAATGATCTTTGGTTCA+AGG 0.477965 5:+85292539 MsG0580028714.01.T01:CDS
ATGCCAACAACATATGAGAA+TGG 0.478869 5:+85290978 MsG0580028714.01.T01:CDS
TTTAAGTACCCAAATGATTG+AGG 0.479377 5:+85291394 MsG0580028714.01.T01:CDS
TTGAATGCGTACGCAAATCA+TGG 0.479527 5:+85290328 MsG0580028714.01.T01:CDS
GAGGACCTTGGTGTTAAAAG+AGG 0.481306 5:+85291413 MsG0580028714.01.T01:CDS
TGCTACTGCCACAAATGAAA+AGG 0.483250 5:+85290233 MsG0580028714.01.T01:CDS
TCCAACTACGGACGAATTCA+AGG 0.486967 5:+85290665 MsG0580028714.01.T01:CDS
GATCACATATCAAGAACAAA+TGG 0.488807 5:+85291214 MsG0580028714.01.T01:CDS
TGCCAACAACATATGAGAAT+GGG 0.494634 5:+85290979 MsG0580028714.01.T01:CDS
CCATCTATGTCCATGGGTAT+GGG 0.495199 5:-85291125 None:intergenic
GATATCATTAGAACCCTTCT+GGG 0.496044 5:+85290908 MsG0580028714.01.T01:CDS
TTATTCCACCAATTGGAAGA+AGG 0.496695 5:-85291475 None:intergenic
AATACATCCATCTATGTCCA+TGG 0.497317 5:-85291132 None:intergenic
AATTAACTGTGAAGGAATCA+TGG 0.499475 5:+85291264 MsG0580028714.01.T01:CDS
ACGATGGGAGTGTACTTGAA+TGG 0.500005 5:+85291005 MsG0580028714.01.T01:CDS
CAAGGTCATTCCTCATAGTC+CGG 0.501298 5:+85290683 MsG0580028714.01.T01:CDS
CGAGGCGCTCTCTCAGTCAA+TGG 0.501800 5:-85292195 None:intergenic
TGTATCTCTCATCTTATCAC+GGG 0.506497 5:+85290419 MsG0580028714.01.T01:CDS
TTTAAGTGAATTAACTGTGA+AGG 0.506731 5:+85291256 MsG0580028714.01.T01:CDS
AATTGAGAGAGCCTTTATCT+GGG 0.513379 5:+85292371 MsG0580028714.01.T01:CDS
TATATTCTCAAATCTTTCGC+CGG 0.520745 5:-85290481 None:intergenic
ACGGGGTATACCTGACATAT+GGG 0.526111 5:+85290437 MsG0580028714.01.T01:CDS
TTAGAGAAGCTGTGTCGCTA+TGG 0.527870 5:+85292157 MsG0580028714.01.T01:CDS
GTTTAAGAAGTAACTCTTGG+AGG 0.529321 5:+85290940 MsG0580028714.01.T01:CDS
GTAAGGTACATGCAGTTCGT+TGG 0.536907 5:+85292412 MsG0580028714.01.T01:CDS
TTAGCTTGGGGTTTGTACAA+TGG 0.537329 5:+85292516 MsG0580028714.01.T01:CDS
CTGTTAACATCTGCAGCAAA+CGG 0.537431 5:-85290717 None:intergenic
GCTCCTTCTTGAAATGGATG+TGG 0.542118 5:-85290519 None:intergenic
TAAACTATGTATCTCCCAGA+AGG 0.549177 5:-85290922 None:intergenic
AAGACTCCCACCCATATGTC+AGG 0.553976 5:-85290447 None:intergenic
GAGAGATACATTGTGGTTGT+CGG 0.554208 5:-85290406 None:intergenic
TTACCACATCCATTTCAAGA+AGG 0.557484 5:+85290516 MsG0580028714.01.T01:CDS
ATGTATCTCTCATCTTATCA+CGG 0.557872 5:+85290418 MsG0580028714.01.T01:CDS
GATGTATTAATGTTGACTAT+AGG 0.560768 5:+85291147 MsG0580028714.01.T01:CDS
GAATCCACGCAAAGGTTATG+TGG 0.560830 5:+85290848 MsG0580028714.01.T01:CDS
TTGATATGTGATCAAGGCAA+TGG 0.563675 5:-85291204 None:intergenic
GCAAACGGTTGAAACATATC+CGG 0.569199 5:-85290702 None:intergenic
ATTACGAGACCTGAAGATGT+TGG 0.570889 5:+85292441 MsG0580028714.01.T01:CDS
TTGAATGGACTGTGTCATTG+GGG 0.572280 5:+85291020 MsG0580028714.01.T01:CDS
TGCACTATGGAATCCAACTA+CGG 0.572611 5:+85290653 MsG0580028714.01.T01:CDS
TTGTGAGATAGTAGTGTACA+AGG 0.575887 5:+85291448 MsG0580028714.01.T01:CDS
TGAAACATATCCGGACTATG+AGG 0.576466 5:-85290693 None:intergenic
CCTTAAAGTCATGTGTGCGC+AGG 0.577780 5:-85290791 None:intergenic
GTGTCGCTATGGAAGTATCT+TGG 0.579503 5:+85292168 MsG0580028714.01.T01:CDS
TGTCGGATAAGAAATTGTTA+CGG 0.585663 5:-85290389 None:intergenic
GTGTTCATGGAGAGACTTGG+TGG 0.588362 5:+85291169 MsG0580028714.01.T01:CDS
ATCAATAGAACGCTACAGCT+GGG 0.588507 5:+85290884 MsG0580028714.01.T01:CDS
CTTTACCACACCCATACCCA+TGG 0.592392 5:+85291115 MsG0580028714.01.T01:CDS
TTAAAGGAAAATATGAGTGT+GGG 0.595838 5:+85292565 MsG0580028714.01.T01:CDS
TATGAGAATGGGATAACGAT+GGG 0.600578 5:+85290990 MsG0580028714.01.T01:CDS
AATGCCACATAACCTTTGCG+TGG 0.605583 5:-85290852 None:intergenic
CTTAAAGGAAAATATGAGTG+TGG 0.609192 5:+85292564 MsG0580028714.01.T01:CDS
ACGAGACCTGAAGATGTTGG+CGG 0.609675 5:+85292444 MsG0580028714.01.T01:CDS
TTAAGGTGATTAGTCATGTG+AGG 0.610143 5:+85290808 MsG0580028714.01.T01:CDS
TGTTTGTTGAAATTAGCTTG+GGG 0.610345 5:+85292504 MsG0580028714.01.T01:CDS
ATACATCCATCTATGTCCAT+GGG 0.612143 5:-85291131 None:intergenic
TGATACAGATCATATTCGTA+AGG 0.613237 5:+85292395 MsG0580028714.01.T01:CDS
TATGTCCATGGGTATGGGTG+TGG 0.615497 5:-85291120 None:intergenic
ACCCAAATGATTGAGGACCT+TGG 0.628747 5:+85291401 MsG0580028714.01.T01:CDS
TAGGTGTTCATGGAGAGACT+TGG 0.639215 5:+85291166 MsG0580028714.01.T01:CDS
ATTGAGAGAGCCTTTATCTG+GGG 0.642746 5:+85292372 MsG0580028714.01.T01:CDS
GGGTATACCTGACATATGGG+TGG 0.647604 5:+85290440 MsG0580028714.01.T01:CDS
ATGTGAGGTTTAGAGCGCCA+CGG 0.650272 5:+85290823 MsG0580028714.01.T01:CDS
GTTAAAAGAGGAAATAGTCG+TGG 0.652729 5:+85291425 MsG0580028714.01.T01:CDS
AAACTATGTATCTCCCAGAA+GGG 0.655772 5:-85290921 None:intergenic
ATATGAGAATGGGATAACGA+TGG 0.667153 5:+85290989 MsG0580028714.01.T01:CDS
AATTGGAAATCTGATTTACG+AGG 0.669793 5:-85292213 None:intergenic
CCACGGTTGAATCCACGCAA+AGG 0.672192 5:+85290840 MsG0580028714.01.T01:CDS
GGTATACCTGACATATGGGT+GGG 0.674429 5:+85290441 MsG0580028714.01.T01:CDS
AAGCTTGGTTCATGACAGTG+AGG 0.678748 5:-85292482 None:intergenic
CCTTTGCGTGGATTCAACCG+TGG 0.679025 5:-85290840 None:intergenic
TGAATGGACTGTGTCATTGG+GGG 0.701339 5:+85291021 MsG0580028714.01.T01:CDS
GTATCTCTCATCTTATCACG+GGG 0.705883 5:+85290420 MsG0580028714.01.T01:CDS
GGACGATCGACACATGACAG+AGG 0.717374 5:-85291308 None:intergenic
ATAAGATGAGAGATACATTG+TGG 0.773285 5:-85290413 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTGAAATTTTAAATTT+CGG + Chr5:85290555-85290574 MsG0580028714.01.T01:CDS 10.0%
!!! CGAAATTTAAAATTTCAAAA+TGG - Chr5:85290557-85290576 None:intergenic 15.0%
!! AATATAACTCAACAAAAACA+TGG - Chr5:85291779-85291798 None:intergenic 20.0%
!!! CAATTTTGATAGAATTGAAA+AGG - Chr5:85290286-85290305 None:intergenic 20.0%
!!! TTTGAAATTTTAAATTTCGG+CGG + Chr5:85290558-85290577 MsG0580028714.01.T01:CDS 20.0%
! AATTAACCGAATTATGGATT+TGG + Chr5:85292643-85292662 MsG0580028714.01.T01:CDS 25.0%
! ATAGTTTAAGAAGTAACTCT+TGG + Chr5:85290937-85290956 MsG0580028714.01.T01:CDS 25.0%
! ATTACAATCATGTGTATGAA+TGG + Chr5:85291917-85291936 MsG0580028714.01.T01:intron 25.0%
! CGAAATTAAACATAAAAGCA+TGG - Chr5:85291638-85291657 None:intergenic 25.0%
! TACTTATTTATTCCACCAAT+TGG - Chr5:85291485-85291504 None:intergenic 25.0%
! TGGATGTGGTAAATTTAATT+TGG - Chr5:85290508-85290527 None:intergenic 25.0%
! TTAAAGGAAAATATGAGTGT+GGG + Chr5:85292565-85292584 MsG0580028714.01.T01:CDS 25.0%
! TTTAAGTGAATTAACTGTGA+AGG + Chr5:85291256-85291275 MsG0580028714.01.T01:CDS 25.0%
!! GATGTATTAATGTTGACTAT+AGG + Chr5:85291147-85291166 MsG0580028714.01.T01:CDS 25.0%
!! TAACCTGATCTAAAACAAAT+TGG - Chr5:85292233-85292252 None:intergenic 25.0%
!! TTGTTTGTTGAAATTAGCTT+GGG + Chr5:85292503-85292522 MsG0580028714.01.T01:CDS 25.0%
!!! TTTCCAATTTGTTTTAGATC+AGG + Chr5:85292227-85292246 MsG0580028714.01.T01:CDS 25.0%
AATCGCTTCAAAGATTTAAG+AGG - Chr5:85290309-85290328 None:intergenic 30.0%
AATTAACTGTGAAGGAATCA+TGG + Chr5:85291264-85291283 MsG0580028714.01.T01:CDS 30.0%
AATTGGAAATCTGATTTACG+AGG - Chr5:85292216-85292235 None:intergenic 30.0%
ACAATGGAAAGAATGATCTT+TGG + Chr5:85292532-85292551 MsG0580028714.01.T01:CDS 30.0%
ACATTGCATACAAACTGATA+TGG + Chr5:85291558-85291577 MsG0580028714.01.T01:intron 30.0%
ATAAGATGAGAGATACATTG+TGG - Chr5:85290416-85290435 None:intergenic 30.0%
ATGTATCTCTCATCTTATCA+CGG + Chr5:85290418-85290437 MsG0580028714.01.T01:CDS 30.0%
ATTCTGTGTCTCTATTTCAA+TGG + Chr5:85291855-85291874 MsG0580028714.01.T01:intron 30.0%
CCAAATGAATAAACTGAATG+TGG + Chr5:85291688-85291707 MsG0580028714.01.T01:intron 30.0%
CCACATTCAGTTTATTCATT+TGG - Chr5:85291691-85291710 None:intergenic 30.0%
CTAATTTCAACAAACAAGCT+TGG - Chr5:85292500-85292519 None:intergenic 30.0%
CTTAAAGGAAAATATGAGTG+TGG + Chr5:85292564-85292583 MsG0580028714.01.T01:CDS 30.0%
GACAAGTTATTAGTTACAGT+TGG - Chr5:85292033-85292052 None:intergenic 30.0%
GATCACATATCAAGAACAAA+TGG + Chr5:85291214-85291233 MsG0580028714.01.T01:CDS 30.0%
GGAAAGAATTAACCGAATTA+TGG + Chr5:85292637-85292656 MsG0580028714.01.T01:CDS 30.0%
GGTAATATCATCGTGTATAT+AGG - Chr5:85290265-85290284 None:intergenic 30.0%
GTTTCATGATGAAGGTTATT+GGG + Chr5:85291530-85291549 MsG0580028714.01.T01:intron 30.0%
TATATTCTCAAATCTTTCGC+CGG - Chr5:85290484-85290503 None:intergenic 30.0%
TATGAAAGATACGCAAATAG+CGG - Chr5:85291958-85291977 None:intergenic 30.0%
TGATACAGATCATATTCGTA+AGG + Chr5:85292395-85292414 MsG0580028714.01.T01:CDS 30.0%
TGTCGGATAAGAAATTGTTA+CGG - Chr5:85290392-85290411 None:intergenic 30.0%
TTAACGAAAAACTTACTGCT+TGG + Chr5:85292250-85292269 MsG0580028714.01.T01:CDS 30.0%
TTGTTCTTGATATGTGATCA+AGG - Chr5:85291213-85291232 None:intergenic 30.0%
TTTAAGTACCCAAATGATTG+AGG + Chr5:85291394-85291413 MsG0580028714.01.T01:CDS 30.0%
! AAAGAATGATCTTTGGTTCA+AGG + Chr5:85292539-85292558 MsG0580028714.01.T01:CDS 30.0%
! AAATCCTCTTTTCATGAACA+TGG + Chr5:85290365-85290384 MsG0580028714.01.T01:CDS 30.0%
! CTCTAAAAGGGAATCAAATT+TGG + Chr5:85291064-85291083 MsG0580028714.01.T01:CDS 30.0%
! CTTGTTTGTTGAAATTAGCT+TGG + Chr5:85292502-85292521 MsG0580028714.01.T01:CDS 30.0%
! TATTTCCTCTTTTAACACCA+AGG - Chr5:85291421-85291440 None:intergenic 30.0%
! TCAATGGTATACAGTTCTAA+TGG + Chr5:85291871-85291890 MsG0580028714.01.T01:intron 30.0%
! TGTTTGTTGAAATTAGCTTG+GGG + Chr5:85292504-85292523 MsG0580028714.01.T01:CDS 30.0%
!!! ACGTCATTTTGACTCTAAAA+GGG + Chr5:85291052-85291071 MsG0580028714.01.T01:CDS 30.0%
!!! TACGTCATTTTGACTCTAAA+AGG + Chr5:85291051-85291070 MsG0580028714.01.T01:CDS 30.0%
AAAAAGATGAAGAGCTAGCT+TGG + Chr5:85291366-85291385 MsG0580028714.01.T01:CDS 35.0%
AAACTATGTATCTCCCAGAA+GGG - Chr5:85290924-85290943 None:intergenic 35.0%
AAATTGAGAGAGCCTTTATC+TGG + Chr5:85292370-85292389 MsG0580028714.01.T01:CDS 35.0%
AAGGAAAACCTTCTTCCAAT+TGG + Chr5:85291467-85291486 MsG0580028714.01.T01:CDS 35.0%
AATACATCCATCTATGTCCA+TGG - Chr5:85291135-85291154 None:intergenic 35.0%
AATTGAGAGAGCCTTTATCT+GGG + Chr5:85292371-85292390 MsG0580028714.01.T01:CDS 35.0%
AGATATCATTAGAACCCTTC+TGG + Chr5:85290907-85290926 MsG0580028714.01.T01:CDS 35.0%
ATACATCCATCTATGTCCAT+GGG - Chr5:85291134-85291153 None:intergenic 35.0%
ATATGAGAATGGGATAACGA+TGG + Chr5:85290989-85291008 MsG0580028714.01.T01:CDS 35.0%
ATCCCATTCTCATATGTTGT+TGG - Chr5:85290984-85291003 None:intergenic 35.0%
ATCTCTTCCAAACAACTCTT+TGG - Chr5:85292345-85292364 None:intergenic 35.0%
ATGCCAACAACATATGAGAA+TGG + Chr5:85290978-85290997 MsG0580028714.01.T01:CDS 35.0%
GATATCATTAGAACCCTTCT+GGG + Chr5:85290908-85290927 MsG0580028714.01.T01:CDS 35.0%
GCGAAACCAAATCCATAATT+CGG - Chr5:85292652-85292671 None:intergenic 35.0%
GGTTAATTCTTTCCAAAGTC+TGG - Chr5:85292631-85292650 None:intergenic 35.0%
GGTTTCATGATGAAGGTTAT+TGG + Chr5:85291529-85291548 MsG0580028714.01.T01:intron 35.0%
GTTAAAAGAGGAAATAGTCG+TGG + Chr5:85291425-85291444 MsG0580028714.01.T01:CDS 35.0%
GTTTAAGAAGTAACTCTTGG+AGG + Chr5:85290940-85290959 MsG0580028714.01.T01:CDS 35.0%
TAAACTATGTATCTCCCAGA+AGG - Chr5:85290925-85290944 None:intergenic 35.0%
TATGAGAATGGGATAACGAT+GGG + Chr5:85290990-85291009 MsG0580028714.01.T01:CDS 35.0%
TGCCAACAACATATGAGAAT+GGG + Chr5:85290979-85290998 MsG0580028714.01.T01:CDS 35.0%
TGGATCAAACTCTTCATTGT+TGG + Chr5:85291284-85291303 MsG0580028714.01.T01:CDS 35.0%
TGGCTTTCTTTATAATAGCG+AGG - Chr5:85291759-85291778 None:intergenic 35.0%
TGTATCTCTCATCTTATCAC+GGG + Chr5:85290419-85290438 MsG0580028714.01.T01:CDS 35.0%
TTACAGTTGGCAAATGATGT+GGG - Chr5:85292020-85292039 None:intergenic 35.0%
TTACCACATCCATTTCAAGA+AGG + Chr5:85290516-85290535 MsG0580028714.01.T01:CDS 35.0%
TTATTCCACCAATTGGAAGA+AGG - Chr5:85291478-85291497 None:intergenic 35.0%
TTGATATGTGATCAAGGCAA+TGG - Chr5:85291207-85291226 None:intergenic 35.0%
TTGTGAGATAGTAGTGTACA+AGG + Chr5:85291448-85291467 MsG0580028714.01.T01:CDS 35.0%
! ACCGGCAAAAGATAGATTTT+TGG - Chr5:85292280-85292299 None:intergenic 35.0%
! ATGTTGACTATAGGTGTTCA+TGG + Chr5:85291156-85291175 MsG0580028714.01.T01:CDS 35.0%
! GCCAAAAATCTATCTTTTGC+CGG + Chr5:85292276-85292295 MsG0580028714.01.T01:CDS 35.0%
! TGTTTTCCAAAAATGTGTCG+CGG + Chr5:85292100-85292119 MsG0580028714.01.T01:intron 35.0%
! TTAAGGTGATTAGTCATGTG+AGG + Chr5:85290808-85290827 MsG0580028714.01.T01:CDS 35.0%
! TTTTGTCTCGTGTAATCTCA+GGG + Chr5:85291804-85291823 MsG0580028714.01.T01:intron 35.0%
! TTTTTGTCTCGTGTAATCTC+AGG + Chr5:85291803-85291822 MsG0580028714.01.T01:intron 35.0%
AACCTACAAACTCCAGACTT+TGG + Chr5:85292616-85292635 MsG0580028714.01.T01:CDS 40.0%
AATGATGTGGGCGAAATTCA+TGG - Chr5:85292008-85292027 None:intergenic 40.0%
ACCAAGGTCCTCAATCATTT+GGG - Chr5:85291405-85291424 None:intergenic 40.0%
AGTCGTCATGTTCATGGATT+TGG + Chr5:85290762-85290781 MsG0580028714.01.T01:CDS 40.0%
ATCAATAGAACGCTACAGCT+GGG + Chr5:85290884-85290903 MsG0580028714.01.T01:CDS 40.0%
ATCTGTATCACCCCAGATAA+AGG - Chr5:85292385-85292404 None:intergenic 40.0%
ATTACGAGACCTGAAGATGT+TGG + Chr5:85292441-85292460 MsG0580028714.01.T01:CDS 40.0%
ATTGAGAGAGCCTTTATCTG+GGG + Chr5:85292372-85292391 MsG0580028714.01.T01:CDS 40.0%
CAAACAACTCTTTGGCATCT+TGG - Chr5:85292337-85292356 None:intergenic 40.0%
CAAGATGCCAAAGAGTTGTT+TGG + Chr5:85292335-85292354 MsG0580028714.01.T01:CDS 40.0%
CATAGTGCAAATCTTGCATC+AGG - Chr5:85290642-85290661 None:intergenic 40.0%
CTGATGCAAGATTTGCACTA+TGG + Chr5:85290640-85290659 MsG0580028714.01.T01:CDS 40.0%
CTGTTAACATCTGCAGCAAA+CGG - Chr5:85290720-85290739 None:intergenic 40.0%
GAAAACCTTCTTCCAATTGG+TGG + Chr5:85291470-85291489 MsG0580028714.01.T01:intron 40.0%
GAGAGATACATTGTGGTTGT+CGG - Chr5:85290409-85290428 None:intergenic 40.0%
GCAAACGGTTGAAACATATC+CGG - Chr5:85290705-85290724 None:intergenic 40.0%
GTATCTCTCATCTTATCACG+GGG + Chr5:85290420-85290439 MsG0580028714.01.T01:CDS 40.0%
GTTACAGTTGGCAAATGATG+TGG - Chr5:85292021-85292040 None:intergenic 40.0%
GTTTCAGCTCCTTCTTGAAA+TGG - Chr5:85290528-85290547 None:intergenic 40.0%
TAAGGTACATGCAGTTCGTT+GGG + Chr5:85292413-85292432 MsG0580028714.01.T01:CDS 40.0%
TGAAACATATCCGGACTATG+AGG - Chr5:85290696-85290715 None:intergenic 40.0%
TGCACTATGGAATCCAACTA+CGG + Chr5:85290653-85290672 MsG0580028714.01.T01:CDS 40.0%
TGCTACTGCCACAAATGAAA+AGG + Chr5:85290233-85290252 MsG0580028714.01.T01:CDS 40.0%
TTGAATGCGTACGCAAATCA+TGG + Chr5:85290328-85290347 MsG0580028714.01.T01:CDS 40.0%
! CTTTGGTTCAAGGTGCTTAA+AGG + Chr5:85292549-85292568 MsG0580028714.01.T01:CDS 40.0%
! GGAGTCTTGTATTCTTTGTC+CGG + Chr5:85290462-85290481 MsG0580028714.01.T01:CDS 40.0%
! GTTTTCCAAAAATGTGTCGC+GGG + Chr5:85292101-85292120 MsG0580028714.01.T01:intron 40.0%
! TTAGCTTGGGGTTTGTACAA+TGG + Chr5:85292516-85292535 MsG0580028714.01.T01:CDS 40.0%
! TTCCAAAGTCTGGAGTTTGT+AGG - Chr5:85292621-85292640 None:intergenic 40.0%
!! ACTTGAATGGACTGTGTCAT+TGG + Chr5:85291018-85291037 MsG0580028714.01.T01:CDS 40.0%
!! AGAGACTTGGTGGTGTTAAA+TGG + Chr5:85291179-85291198 MsG0580028714.01.T01:CDS 40.0%
!! CTTGAATGGACTGTGTCATT+GGG + Chr5:85291019-85291038 MsG0580028714.01.T01:CDS 40.0%
!! TTGAATGGACTGTGTCATTG+GGG + Chr5:85291020-85291039 MsG0580028714.01.T01:CDS 40.0%
!!! GGTACTGACCTTTTCATTTG+TGG - Chr5:85290244-85290263 None:intergenic 40.0%
AAGCTTGGTTCATGACAGTG+AGG - Chr5:85292485-85292504 None:intergenic 45.0%
AATGCCACATAACCTTTGCG+TGG - Chr5:85290855-85290874 None:intergenic 45.0%
ACCCAAATGATTGAGGACCT+TGG + Chr5:85291401-85291420 MsG0580028714.01.T01:CDS 45.0%
ACCTTGAATTCGTCCGTAGT+TGG - Chr5:85290669-85290688 None:intergenic 45.0%
ACGGGGTATACCTGACATAT+GGG + Chr5:85290437-85290456 MsG0580028714.01.T01:CDS 45.0%
CAAGGTCATTCCTCATAGTC+CGG + Chr5:85290683-85290702 MsG0580028714.01.T01:CDS 45.0%
CACCAAGGTCCTCAATCATT+TGG - Chr5:85291406-85291425 None:intergenic 45.0%
CACTCAAGTCGTCATGTTCA+TGG + Chr5:85290756-85290775 MsG0580028714.01.T01:CDS 45.0%
CATCAATAGAACGCTACAGC+TGG + Chr5:85290883-85290902 MsG0580028714.01.T01:CDS 45.0%
CCATCTATGTCCATGGGTAT+GGG - Chr5:85291128-85291147 None:intergenic 45.0%
CCTCTAGCGAACACAAGAAA+AGG - Chr5:85291511-85291530 None:intergenic 45.0%
CGCTAGAGGTTTCATGATGA+AGG + Chr5:85291522-85291541 MsG0580028714.01.T01:intron 45.0%
CGGACCATGTTCATGAAAAG+AGG - Chr5:85290372-85290391 None:intergenic 45.0%
GAATCCACGCAAAGGTTATG+TGG + Chr5:85290848-85290867 MsG0580028714.01.T01:CDS 45.0%
GCTCCTTCTTGAAATGGATG+TGG - Chr5:85290522-85290541 None:intergenic 45.0%
GGTATACCTGACATATGGGT+GGG + Chr5:85290441-85290460 MsG0580028714.01.T01:CDS 45.0%
GTAAGGTACATGCAGTTCGT+TGG + Chr5:85292412-85292431 MsG0580028714.01.T01:CDS 45.0%
TAGGTGTTCATGGAGAGACT+TGG + Chr5:85291166-85291185 MsG0580028714.01.T01:CDS 45.0%
TCCAACTACGGACGAATTCA+AGG + Chr5:85290665-85290684 MsG0580028714.01.T01:CDS 45.0%
TCCATCTATGTCCATGGGTA+TGG - Chr5:85291129-85291148 None:intergenic 45.0%
! ACGATGGGAGTGTACTTGAA+TGG + Chr5:85291005-85291024 MsG0580028714.01.T01:CDS 45.0%
! CCTTTTCTTGTGTTCGCTAG+AGG + Chr5:85291508-85291527 MsG0580028714.01.T01:intron 45.0%
! TTAGAGAAGCTGTGTCGCTA+TGG + Chr5:85292157-85292176 MsG0580028714.01.T01:CDS 45.0%
! TTTTGCTAGAGTCACTCGAC+CGG - Chr5:85292298-85292317 None:intergenic 45.0%
!! GAGGACCTTGGTGTTAAAAG+AGG + Chr5:85291413-85291432 MsG0580028714.01.T01:CDS 45.0%
!! GTGTCGCTATGGAAGTATCT+TGG + Chr5:85292168-85292187 MsG0580028714.01.T01:CDS 45.0%
!! TCATGTGTCGATCGTCCTTT+TGG + Chr5:85291314-85291333 MsG0580028714.01.T01:CDS 45.0%
!! TGAATGGACTGTGTCATTGG+GGG + Chr5:85291021-85291040 MsG0580028714.01.T01:CDS 45.0%
AAAATGTGTCGCGGGAGATG+AGG + Chr5:85292109-85292128 MsG0580028714.01.T01:intron 50.0%
AAGACTCCCACCCATATGTC+AGG - Chr5:85290450-85290469 None:intergenic 50.0%
ACGAGACCTGAAGATGTTGG+CGG + Chr5:85292444-85292463 MsG0580028714.01.T01:CDS 50.0%
CACGGGGTATACCTGACATA+TGG + Chr5:85290436-85290455 MsG0580028714.01.T01:CDS 50.0%
CCCATACCCATGGACATAGA+TGG + Chr5:85291125-85291144 MsG0580028714.01.T01:CDS 50.0%
CCTGCGCACACATGACTTTA+AGG + Chr5:85290791-85290810 MsG0580028714.01.T01:CDS 50.0%
CCTTAAAGTCATGTGTGCGC+AGG - Chr5:85290794-85290813 None:intergenic 50.0%
CTTTACCACACCCATACCCA+TGG + Chr5:85291115-85291134 MsG0580028714.01.T01:CDS 50.0%
GGGTATACCTGACATATGGG+TGG + Chr5:85290440-85290459 MsG0580028714.01.T01:CDS 50.0%
GTCTCGTGTAATCTCAGGGT+TGG + Chr5:85291808-85291827 MsG0580028714.01.T01:intron 50.0%
GTGTTCATGGAGAGACTTGG+TGG + Chr5:85291169-85291188 MsG0580028714.01.T01:CDS 50.0%
TATGTCCATGGGTATGGGTG+TGG - Chr5:85291123-85291142 None:intergenic 50.0%
TTGCCCTTTCCCACTCCAAA+AGG - Chr5:85291332-85291351 None:intergenic 50.0%
! ATGTGAGGTTTAGAGCGCCA+CGG + Chr5:85290823-85290842 MsG0580028714.01.T01:CDS 50.0%
! CATCTCCCGCGACACATTTT+TGG - Chr5:85292109-85292128 None:intergenic 50.0%
!! TGTCGATCGTCCTTTTGGAG+TGG + Chr5:85291319-85291338 MsG0580028714.01.T01:CDS 50.0%
!!! CGTCCTTTTGGAGTGGGAAA+GGG + Chr5:85291326-85291345 MsG0580028714.01.T01:CDS 50.0%
!!! GTCGATCGTCCTTTTGGAGT+GGG + Chr5:85291320-85291339 MsG0580028714.01.T01:CDS 50.0%
!!! TCGTCCTTTTGGAGTGGGAA+AGG + Chr5:85291325-85291344 MsG0580028714.01.T01:CDS 50.0%
CCACGGTTGAATCCACGCAA+AGG + Chr5:85290840-85290859 MsG0580028714.01.T01:CDS 55.0%
CCTTTGCGTGGATTCAACCG+TGG - Chr5:85290843-85290862 None:intergenic 55.0%
GCGGGAGATGAGGAATCGAT+TGG + Chr5:85292119-85292138 MsG0580028714.01.T01:intron 55.0%
GGACGATCGACACATGACAG+AGG - Chr5:85291311-85291330 None:intergenic 55.0%
! ACCTGAAGATGTTGGCGGAC+TGG + Chr5:85292449-85292468 MsG0580028714.01.T01:CDS 55.0%
!! CCTGAAGATGTTGGCGGACT+GGG + Chr5:85292450-85292469 MsG0580028714.01.T01:CDS 55.0%
CCCAGTCCGCCAACATCTTC+AGG - Chr5:85292453-85292472 None:intergenic 60.0%
! CGAGGCGCTCTCTCAGTCAA+TGG - Chr5:85292198-85292217 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 85290219 85292722 85290219 ID=MsG0580028714.01;Name=MsG0580028714.01
Chr5 mRNA 85290219 85292722 85290219 ID=MsG0580028714.01.T01;Parent=MsG0580028714.01;Name=MsG0580028714.01.T01;_AED=0.54;_eAED=0.54;_QI=0|0|0|0.5|1|1|2|0|612
Chr5 exon 85290219 85291488 85290219 ID=MsG0580028714.01.T01:exon:29883;Parent=MsG0580028714.01.T01
Chr5 exon 85292154 85292722 85292154 ID=MsG0580028714.01.T01:exon:29884;Parent=MsG0580028714.01.T01
Chr5 CDS 85290219 85291488 85290219 ID=MsG0580028714.01.T01:cds;Parent=MsG0580028714.01.T01
Chr5 CDS 85292154 85292722 85292154 ID=MsG0580028714.01.T01:cds;Parent=MsG0580028714.01.T01
Gene Sequence

>MsG0580028714.01.T01

ATGGAGAAGAAATATGCTACTGCCACAAATGAAAAGGTCAGTACCTATATACACGATGATATTACCTTTTCAATTCTATCAAAATTGCCTCTTAAATCTTTGAAGCGATTTGAATGCGTACGCAAATCATGGTCACTTTTGTTTGAAAATCCTCTTTTCATGAACATGGTCCGTAACAATTTCTTATCCGACAACCACAATGTATCTCTCATCTTATCACGGGGTATACCTGACATATGGGTGGGAGTCTTGTATTCTTTGTCCGGCGAAAGATTTGAGAATATAGCCAAATTAAATTTACCACATCCATTTCAAGAAGGAGCTGAAACTCTCAACCATTTTGAAATTTTAAATTTCGGCGGTATTTATGATGATTTTGTTTTTGTCAAATGTTATCTTAAAATTAATGTTAAAGTCATTCCTGATGCAAGATTTGCACTATGGAATCCAACTACGGACGAATTCAAGGTCATTCCTCATAGTCCGGATATGTTTCAACCGTTTGCTGCAGATGTTAACAGTGATGTGATTAATTTTCACTCAAGTCGTCATGTTCATGGATTTGGCTACGACCTGCGCACACATGACTTTAAGGTGATTAGTCATGTGAGGTTTAGAGCGCCACGGTTGAATCCACGCAAAGGTTATGTGGCATTGAGTGATACATCAATAGAACGCTACAGCTGGGAGATATCATTAGAACCCTTCTGGGAGATACATAGTTTAAGAAGTAACTCTTGGAGGAAACTTGATGTTGTTATGCCAACAACATATGAGAATGGGATAACGATGGGAGTGTACTTGAATGGACTGTGTCATTGGGGGTGTATTATACGTCATTTTGACTCTAAAAGGGAATCAAATTTGGTGTCGTTTGACTTGAGCAATGATGTGTTCTTTACCACACCCATACCCATGGACATAGATGGATGTATTAATGTTGACTATAGGTGTTCATGGAGAGACTTGGTGGTGTTAAATGGATCCATTGCCTTGATCACATATCAAGAACAAATGGCTACTTTTAACATATCAATTTTAAGTGAATTAACTGTGAAGGAATCATGGATCAAACTCTTCATTGTTGGACCTCTGTCATGTGTCGATCGTCCTTTTGGAGTGGGAAAGGGCAAAATATTCTTCACAAAAAAAGATGAAGAGCTAGCTTGGTTTGATTTAAGTACCCAAATGATTGAGGACCTTGGTGTTAAAAGAGGAAATAGTCGTGGTTGTGAGATAGTAGTGTACAAGGAAAACCTTCTTCCAATTGACTTTAGAGAAGCTGTGTCGCTATGGAAGTATCTTGGTGTTCCATTGACTGAGAGAGCGCCTCGTAAATCAGATTTCCAATTTGTTTTAGATCAGGTTAACGAAAAACTTACTGCTTGGAAAGCCAAAAATCTATCTTTTGCCGGTCGAGTGACTCTAGCAAAAAGTTATATGATGACTGCCAAGATGCCAAAGAGTTGTTTGGAAGAGATTGAAAAAATTGAGAGAGCCTTTATCTGGGGTGATACAGATCATATTCGTAAGGTACATGCAGTTCGTTGGGAAGTTATTACGAGACCTGAAGATGTTGGCGGACTGGGATTGAGAAACCTCACTGTCATGAACCAAGCTTGTTTGTTGAAATTAGCTTGGGGTTTGTACAATGGAAAGAATGATCTTTGGTTCAAGGTGCTTAAAGGAAAATATGAGTGTGGGCATCAGCTTGATAATAATGTTGTTGTCAAACCTACAAACTCCAGACTTTGGAAAGAATTAACCGAATTATGGATTTGGTTTCGCTTTAATCAATGTTTTATGCATTCATTGCAGTCAGCAAATTTGAACTACTAG
Protein sequence

>MsG0580028714.01.T01

MEKKYATATNEKVSTYIHDDITFSILSKLPLKSLKRFECVRKSWSLLFENPLFMNMVRNNFLSDNHNVSLILSRGIPDIWVGVLYSLSGERFENIAKLNLPHPFQEGAETLNHFEILNFGGIYDDFVFVKCYLKINVKVIPDARFALWNPTTDEFKVIPHSPDMFQPFAADVNSDVINFHSSRHVHGFGYDLRTHDFKVISHVRFRAPRLNPRKGYVALSDTSIERYSWEISLEPFWEIHSLRSNSWRKLDVVMPTTYENGITMGVYLNGLCHWGCIIRHFDSKRESNLVSFDLSNDVFFTTPIPMDIDGCINVDYRCSWRDLVVLNGSIALITYQEQMATFNISILSELTVKESWIKLFIVGPLSCVDRPFGVGKGKIFFTKKDEELAWFDLSTQMIEDLGVKRGNSRGCEIVVYKENLLPIDFREAVSLWKYLGVPLTERAPRKSDFQFVLDQVNEKLTAWKAKNLSFAGRVTLAKSYMMTAKMPKSCLEEIEKIERAFIWGDTDHIRKVHAVRWEVITRPEDVGGLGLRNLTVMNQACLLKLAWGLYNGKNDLWFKVLKGKYECGHQLDNNVVVKPTNSRLWKELTELWIWFRFNQCFMHSLQSANLNY*