AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035824.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035824.01.T01 MTR_6g090180 76.886 411 76 6 1 399 31 434 0.0 620
MsG0680035824.01.T01 MTR_0054s0090 54.854 412 165 8 4 402 2 405 4.65e-146 421
MsG0680035824.01.T01 MTR_6g086825 56.659 413 152 6 7 402 57 459 1.73e-145 421
MsG0680035824.01.T01 MTR_6g079810 56.174 413 159 12 4 401 56 461 5.44e-145 420
MsG0680035824.01.T01 MTR_0054s0100 54.458 415 168 8 1 402 1 407 1.16e-144 417
MsG0680035824.01.T01 MTR_6g079770 54.632 421 165 10 5 404 3 418 2.39e-141 409
MsG0680035824.01.T01 MTR_0134s0060 54.902 408 166 8 12 402 5 411 7.06e-140 405
MsG0680035824.01.T01 MTR_4g028510 54.589 414 157 11 6 402 2 401 5.28e-138 402
MsG0680035824.01.T01 MTR_4g028680 51.923 416 163 10 6 402 2 399 1.16e-131 384
MsG0680035824.01.T01 MTR_6g080680 52.913 412 156 6 1 397 1 389 1.24e-131 384
MsG0680035824.01.T01 MTR_4g130330 53.086 405 154 12 16 402 4 390 9.05e-125 366
MsG0680035824.01.T01 MTR_4g028660 50.000 408 176 9 6 399 2 395 5.34e-124 364
MsG0680035824.01.T01 MTR_4g027450 50.000 408 176 9 6 399 2 395 5.34e-124 364
MsG0680035824.01.T01 MTR_6g478230 50.691 434 154 9 1 402 1 406 5.90e-124 365
MsG0680035824.01.T01 MTR_6g090250 50.508 394 160 8 37 398 29 419 5.16e-119 352
MsG0680035824.01.T01 MTR_4g028750 52.308 390 155 11 6 380 2 375 2.43e-117 347
MsG0680035824.01.T01 MTR_6g078010 52.368 359 126 9 56 398 1 330 2.42e-113 335
MsG0680035824.01.T01 MTR_5g097220 48.522 406 186 8 14 402 8 407 3.39e-113 337
MsG0680035824.01.T01 MTR_6g461660 48.346 393 172 11 1 379 1 376 3.61e-106 319
MsG0680035824.01.T01 MTR_0129s0070 47.382 401 184 10 13 402 11 395 8.35e-105 315
MsG0680035824.01.T01 MTR_6g079790 51.724 319 134 4 96 404 2 310 1.55e-103 309
MsG0680035824.01.T01 MTR_5g097680 45.057 435 193 14 4 402 2 426 3.54e-102 310
MsG0680035824.01.T01 MTR_8g063440 44.000 400 197 9 8 400 1 380 1.96e-98 298
MsG0680035824.01.T01 MTR_2g022000 44.140 401 189 7 5 379 2 393 3.16e-98 300
MsG0680035824.01.T01 MTR_2g021800 42.857 427 206 8 5 404 2 417 1.21e-97 298
MsG0680035824.01.T01 MTR_2g038680 44.235 425 194 13 5 402 2 410 5.26e-97 296
MsG0680035824.01.T01 MTR_4g102410 43.689 412 201 12 8 401 50 448 9.60e-97 296
MsG0680035824.01.T01 MTR_0129s0120 45.387 401 192 10 13 402 11 395 1.08e-96 295
MsG0680035824.01.T01 MTR_6g087620 51.104 317 110 5 84 393 1 279 1.06e-95 288
MsG0680035824.01.T01 MTR_4g117550 43.500 400 178 9 13 402 11 372 2.77e-95 290
MsG0680035824.01.T01 MTR_2g021770 41.587 416 202 11 13 402 6 406 3.54e-95 291
MsG0680035824.01.T01 MTR_7g104710 50.150 333 104 7 1 318 1 286 5.65e-95 287
MsG0680035824.01.T01 MTR_0129s0050 43.902 410 204 10 11 402 6 407 9.05e-95 290
MsG0680035824.01.T01 MTR_5g097330 42.754 414 196 10 13 404 10 404 1.97e-93 286
MsG0680035824.01.T01 MTR_5g037680 42.157 408 180 9 14 396 3 379 1.66e-92 286
MsG0680035824.01.T01 MTR_7g017130 42.615 413 202 11 5 402 4 396 6.59e-91 280
MsG0680035824.01.T01 MTR_2g021950 42.233 412 201 12 5 399 2 393 8.18e-91 279
MsG0680035824.01.T01 MTR_7g069550 44.444 414 191 16 6 402 3 394 1.10e-89 276
MsG0680035824.01.T01 MTR_2g104340 44.363 408 201 11 6 402 3 395 2.10e-89 276
MsG0680035824.01.T01 MTR_7g023800 45.455 352 131 8 58 396 1 304 4.67e-89 272
MsG0680035824.01.T01 MTR_7g017170 41.784 426 199 13 5 402 4 408 9.00e-88 272
MsG0680035824.01.T01 MTR_7g017040 42.995 414 200 10 6 402 3 397 2.39e-87 271
MsG0680035824.01.T01 MTR_4g055820 45.479 365 168 8 13 359 8 359 1.11e-86 268
MsG0680035824.01.T01 MTR_1g007450 44.697 396 185 14 11 389 4 382 1.84e-85 266
MsG0680035824.01.T01 MTR_5g096630 39.904 416 216 8 12 404 11 415 3.69e-85 266
MsG0680035824.01.T01 MTR_3g011120 43.223 391 184 14 13 393 8 370 4.86e-85 264
MsG0680035824.01.T01 MTR_1g007410 44.010 409 198 11 1 395 7 398 7.32e-85 265
MsG0680035824.01.T01 MTR_8g012090 42.204 372 154 7 14 372 11 334 1.20e-84 261
MsG0680035824.01.T01 MTR_5g069390 40.334 419 206 10 10 401 14 415 2.19e-84 266
MsG0680035824.01.T01 MTR_2g034700 41.814 397 184 11 13 396 7 369 2.82e-84 262
MsG0680035824.01.T01 MTR_5g092850 43.250 400 193 13 18 399 15 398 3.52e-83 260
MsG0680035824.01.T01 MTR_8g064890 41.769 407 202 13 10 404 6 389 5.43e-83 259
MsG0680035824.01.T01 MTR_2g066170 39.853 409 212 11 8 404 1 387 2.21e-82 258
MsG0680035824.01.T01 MTR_8g041270 43.062 418 197 13 9 402 5 405 1.21e-81 256
MsG0680035824.01.T01 MTR_2g064950 42.289 402 183 13 13 386 4 384 2.53e-81 255
MsG0680035824.01.T01 MTR_5g074850 43.702 389 188 14 11 381 27 402 4.93e-81 267
MsG0680035824.01.T01 MTR_0831s0010 39.192 421 203 14 4 403 33 421 1.98e-80 253
MsG0680035824.01.T01 MTR_5g097350 41.606 411 195 10 5 399 2 383 6.96e-80 251
MsG0680035824.01.T01 MTR_6g090260 65.591 186 58 3 218 398 75 259 8.70e-80 246
MsG0680035824.01.T01 MTR_6g090260 63.768 69 24 1 1 68 1 69 1.40e-18 85.1
MsG0680035824.01.T01 MTR_8g464770 40.452 398 193 13 13 396 6 373 2.49e-79 249
MsG0680035824.01.T01 MTR_8g467670 40.050 397 195 12 18 402 13 378 2.51e-79 250
MsG0680035824.01.T01 MTR_8g046310 38.835 412 191 14 8 398 2 373 1.10e-78 248
MsG0680035824.01.T01 MTR_4g014370 38.515 431 203 12 12 404 4 410 1.31e-78 248
MsG0680035824.01.T01 MTR_5g059430 38.372 430 208 9 10 401 14 424 1.68e-78 249
MsG0680035824.01.T01 MTR_2g065860 40.494 405 209 11 12 404 5 389 4.57e-78 246
MsG0680035824.01.T01 MTR_5g064700 42.706 377 174 14 58 402 1 367 1.11e-77 245
MsG0680035824.01.T01 MTR_2g104280 41.587 416 196 14 14 402 9 404 1.41e-77 246
MsG0680035824.01.T01 MTR_5g072060 43.883 376 163 13 18 378 5 347 1.59e-77 251
MsG0680035824.01.T01 MTR_2g065840 38.686 411 215 12 8 403 1 389 1.30e-76 243
MsG0680035824.01.T01 MTR_5g096910 39.756 410 193 12 16 402 14 392 1.73e-76 243
MsG0680035824.01.T01 MTR_5g076490 44.077 363 159 12 56 402 1 335 3.97e-76 240
MsG0680035824.01.T01 MTR_7g079640 41.388 389 174 14 6 379 3 352 6.35e-76 241
MsG0680035824.01.T01 MTR_2g066200 37.590 415 215 12 8 404 1 389 1.95e-75 239
MsG0680035824.01.T01 MTR_5g075370 42.010 388 191 15 16 382 5 379 1.96e-75 250
MsG0680035824.01.T01 MTR_8g033090 39.905 421 199 14 16 402 11 411 5.50e-75 239
MsG0680035824.01.T01 MTR_2g066150 37.890 417 183 13 8 404 1 361 1.22e-74 237
MsG0680035824.01.T01 MTR_8g046200 38.228 429 191 16 18 398 15 417 3.11e-73 235
MsG0680035824.01.T01 MTR_5g024260 39.348 399 188 15 4 378 13 381 3.25e-73 234
MsG0680035824.01.T01 MTR_8g013000 42.623 366 177 10 13 361 4 353 4.24e-72 232
MsG0680035824.01.T01 MTR_8g033140 36.036 444 215 14 1 402 1 417 4.63e-72 232
MsG0680035824.01.T01 MTR_6g070880 51.600 250 97 6 4 237 17 258 2.27e-71 225
MsG0680035824.01.T01 MTR_6g071420 51.600 250 97 6 4 237 17 258 2.27e-71 225
MsG0680035824.01.T01 MTR_5g091140 40.201 398 180 13 1 377 30 390 1.34e-70 228
MsG0680035824.01.T01 MTR_8g039500 38.624 378 187 10 8 372 1 346 1.45e-70 226
MsG0680035824.01.T01 MTR_5g092860 39.554 359 180 9 37 383 20 353 1.61e-69 224
MsG0680035824.01.T01 MTR_5g074800 43.056 360 169 16 58 402 1 339 4.42e-69 222
MsG0680035824.01.T01 MTR_1g053510 37.500 416 219 12 7 398 3 401 6.61e-69 223
MsG0680035824.01.T01 MTR_7g111700 37.626 396 191 9 18 402 14 364 3.18e-68 220
MsG0680035824.01.T01 MTR_1g007430 41.935 341 166 8 30 361 7 324 8.93e-67 215
MsG0680035824.01.T01 MTR_8g032980 37.383 428 221 13 7 400 4 418 9.31e-67 218
MsG0680035824.01.T01 MTR_8g064790 36.973 403 176 14 10 404 6 338 4.11e-66 214
MsG0680035824.01.T01 MTR_8g018110 36.165 412 212 12 16 402 11 396 1.07e-64 212
MsG0680035824.01.T01 MTR_4g007940 38.938 339 168 10 79 400 23 339 1.37e-64 210
MsG0680035824.01.T01 MTR_7g016930 44.479 326 148 11 12 334 9 304 2.54e-64 209
MsG0680035824.01.T01 MTR_8g033110 37.116 423 211 16 16 402 11 414 4.68e-64 211
MsG0680035824.01.T01 MTR_1g098180 35.904 415 192 13 2 400 7 363 1.91e-63 208
MsG0680035824.01.T01 MTR_8g046220 35.225 423 217 12 7 398 5 401 9.37e-63 207
MsG0680035824.01.T01 MTR_5g022850 35.149 404 201 8 6 402 3 352 4.77e-62 204
MsG0680035824.01.T01 MTR_6g079730 67.143 140 46 0 259 398 6 145 5.94e-62 197
MsG0680035824.01.T01 MTR_8g036970 38.211 369 144 12 23 378 2 299 1.54e-61 203
MsG0680035824.01.T01 MTR_8g063330 36.585 369 195 11 8 358 1 348 1.89e-61 206
MsG0680035824.01.T01 MTR_5g096900 42.197 346 132 15 12 326 5 313 8.94e-59 194
MsG0680035824.01.T01 MTR_8g063370 34.840 376 202 12 14 378 23 366 1.43e-58 196
MsG0680035824.01.T01 MTR_6g465360 46.835 237 110 7 4 226 47 281 9.77e-55 183
MsG0680035824.01.T01 MTR_2g021920 45.188 239 116 8 170 399 37 269 7.04e-54 180
MsG0680035824.01.T01 MTR_5g043605 33.898 413 179 13 2 402 8 338 6.98e-53 180
MsG0680035824.01.T01 MTR_1g050308 34.146 410 179 13 5 404 20 348 4.75e-52 177
MsG0680035824.01.T01 MTR_6g004450 45.148 237 109 6 170 402 49 268 1.17e-51 174
MsG0680035824.01.T01 MTR_8g063350 34.031 382 172 16 8 377 6 319 5.71e-51 175
MsG0680035824.01.T01 MTR_5g086590 44.262 244 111 7 132 375 13 231 1.40e-50 170
MsG0680035824.01.T01 MTR_1g050312 37.313 335 152 13 70 395 2 287 4.48e-50 171
MsG0680035824.01.T01 MTR_5g094350 41.017 295 126 11 15 288 9 276 6.56e-50 170
MsG0680035824.01.T01 MTR_5g068490 38.141 312 148 11 93 402 8 276 7.51e-49 167
MsG0680035824.01.T01 MTR_5g023970 46.392 194 102 2 212 404 5 197 6.01e-47 159
MsG0680035824.01.T01 MTR_5g097850 47.619 189 87 4 223 404 63 246 7.66e-47 161
MsG0680035824.01.T01 MTR_8g063310 31.671 401 227 14 14 395 17 389 1.23e-46 165
MsG0680035824.01.T01 MTR_8g033000 34.133 375 206 13 56 402 1 362 3.73e-45 160
MsG0680035824.01.T01 MTR_3g018750 41.833 251 117 8 169 402 2 240 5.60e-45 156
MsG0680035824.01.T01 MTR_5g097820 36.301 292 142 10 1 271 1 269 1.84e-44 155
MsG0680035824.01.T01 MTR_4g014370 41.414 198 106 2 211 404 147 338 3.17e-43 154
MsG0680035824.01.T01 MTR_4g014370 44.355 124 56 4 13 125 16 137 3.55e-18 85.5
MsG0680035824.01.T01 MTR_1g115205 40.000 265 107 8 2 257 16 237 4.29e-42 149
MsG0680035824.01.T01 MTR_1g076810 40.400 250 117 8 13 250 12 241 1.44e-41 155
MsG0680035824.01.T01 MTR_2g104260 40.816 294 135 12 6 279 3 277 1.67e-40 145
MsG0680035824.01.T01 MTR_5g066420 47.368 152 69 3 249 392 1 149 9.82e-40 139
MsG0680035824.01.T01 MTR_4g016000 40.249 241 98 8 137 367 2 206 1.36e-39 141
MsG0680035824.01.T01 MTR_6g009350 43.415 205 89 8 171 366 9 195 2.01e-39 140
MsG0680035824.01.T01 MTR_4g094400 64.762 105 23 2 246 336 7 111 7.11e-38 134
MsG0680035824.01.T01 MTR_8g035690 35.664 286 150 10 138 402 30 302 8.92e-37 136
MsG0680035824.01.T01 MTR_7g019250 38.211 246 113 9 146 385 206 418 1.22e-36 139
MsG0680035824.01.T01 MTR_3g030620 42.857 168 87 5 241 401 15 180 3.72e-36 130
MsG0680035824.01.T01 MTR_5g037190 36.268 284 131 10 5 273 2 250 7.57e-35 129
MsG0680035824.01.T01 MTR_5g096920 44.156 154 81 3 249 401 1 150 1.59e-33 123
MsG0680035824.01.T01 MTR_8g073570 43.529 170 82 6 18 181 9 170 1.96e-31 118
MsG0680035824.01.T01 MTR_5g097660 49.123 114 57 1 287 399 3 116 3.78e-31 115
MsG0680035824.01.T01 MTR_7g017150 40.513 195 110 4 211 402 75 266 5.95e-31 119
MsG0680035824.01.T01 MTR_7g017120 40.000 200 112 5 208 402 69 265 1.00e-30 119
MsG0680035824.01.T01 MTR_5g098950 36.842 228 101 6 134 361 90 274 1.29e-30 119
MsG0680035824.01.T01 MTR_4g133170 26.722 363 220 14 22 375 7 332 2.93e-29 117
MsG0680035824.01.T01 MTR_0667s0010 27.368 380 218 18 22 375 9 356 1.09e-27 113
MsG0680035824.01.T01 MTR_2g022020 44.068 118 64 1 282 399 1 116 2.23e-27 105
MsG0680035824.01.T01 MTR_2g024110 25.729 377 216 17 22 375 7 342 1.23e-26 110
MsG0680035824.01.T01 MTR_1g068835 26.446 363 223 13 22 375 7 334 1.77e-26 109
MsG0680035824.01.T01 MTR_4g116330 26.961 408 248 13 4 401 8 375 1.82e-26 109
MsG0680035824.01.T01 MTR_1g047080 29.379 354 171 14 56 402 1 282 2.09e-26 107
MsG0680035824.01.T01 MTR_5g097540 42.069 145 75 4 218 361 97 233 4.81e-26 107
MsG0680035824.01.T01 MTR_5g097650 43.262 141 71 2 16 153 19 153 1.79e-25 101
MsG0680035824.01.T01 MTR_2g028110 27.049 366 221 15 22 376 7 337 5.77e-25 105
MsG0680035824.01.T01 MTR_7g101200 33.906 233 108 9 132 360 38 228 1.55e-24 101
MsG0680035824.01.T01 MTR_3g019290 39.623 212 81 9 16 224 11 178 1.65e-24 99.8
MsG0680035824.01.T01 MTR_4g094365 26.601 406 235 14 13 401 2 361 8.90e-24 102
MsG0680035824.01.T01 MTR_1g068860 27.397 365 219 18 22 375 7 336 2.73e-23 100
MsG0680035824.01.T01 MTR_2g028160 25.495 404 239 16 22 391 8 383 5.82e-23 100
MsG0680035824.01.T01 MTR_2g028130 26.263 396 212 17 22 375 8 365 1.04e-22 99.4
MsG0680035824.01.T01 MTR_2g031720 26.016 369 225 16 22 376 9 343 1.44e-22 99.0
MsG0680035824.01.T01 MTR_1g068875 25.824 364 223 16 22 375 7 333 2.40e-22 98.2
MsG0680035824.01.T01 MTR_5g036250 48.454 97 49 1 299 395 8 103 2.62e-22 94.0
MsG0680035824.01.T01 MTR_2g026010 25.770 357 213 15 38 378 23 343 2.75e-22 98.2
MsG0680035824.01.T01 MTR_5g086780 45.283 106 58 0 274 379 123 228 2.80e-22 95.1
MsG0680035824.01.T01 MTR_5g086780 63.934 61 20 1 5 63 2 62 3.42e-14 72.0
MsG0680035824.01.T01 MTR_2g426070 26.702 382 220 17 22 376 9 357 5.86e-22 97.1
MsG0680035824.01.T01 MTR_2g426060 26.509 381 219 17 22 375 9 355 8.79e-22 96.7
MsG0680035824.01.T01 MTR_2g028140 25.455 385 228 16 22 375 8 364 2.74e-21 95.5
MsG0680035824.01.T01 MTR_1g097560 28.649 370 212 16 16 379 33 356 2.79e-21 94.7
MsG0680035824.01.T01 MTR_2g425980 25.773 388 214 16 22 375 8 355 4.20e-21 94.7
MsG0680035824.01.T01 MTR_3g034130 26.316 380 234 14 14 380 4 350 7.35e-21 93.6
MsG0680035824.01.T01 MTR_3g083010 26.571 350 206 12 22 348 9 330 9.46e-21 94.0
MsG0680035824.01.T01 MTR_1g097330 28.349 321 186 13 21 338 18 297 2.27e-20 92.8
MsG0680035824.01.T01 MTR_4g116330 25.980 408 213 15 4 401 8 336 3.28e-20 91.3
MsG0680035824.01.T01 MTR_4g070550 25.320 391 248 14 22 391 8 375 3.45e-20 92.0
MsG0680035824.01.T01 MTR_1g055135 26.593 361 218 12 18 364 12 339 5.55e-20 91.3
MsG0680035824.01.T01 MTR_5g097210 25.750 400 238 16 13 399 3 356 8.50e-20 90.5
MsG0680035824.01.T01 MTR_2g426020 25.661 378 226 17 22 375 9 355 1.59e-19 90.1
MsG0680035824.01.T01 MTR_5g091150 30.275 218 100 5 92 309 19 184 1.70e-19 86.3
MsG0680035824.01.T01 MTR_5g096070 40.000 140 59 4 13 149 20 137 2.17e-19 85.1
MsG0680035824.01.T01 MTR_2g055970 28.358 335 194 13 10 338 202 496 2.62e-19 90.5
MsG0680035824.01.T01 MTR_4g023080 24.365 394 246 9 13 401 3 349 2.92e-19 88.6
MsG0680035824.01.T01 MTR_3g103020 25.791 411 254 13 2 401 3 373 4.04e-19 88.6
MsG0680035824.01.T01 MTR_4g021785 24.750 400 236 13 14 401 4 350 4.15e-19 88.2
MsG0680035824.01.T01 MTR_5g096050 44.954 109 49 1 249 346 1 109 7.24e-19 82.4
MsG0680035824.01.T01 MTR_8g099460 25.538 372 225 14 22 375 8 345 1.00e-18 87.8
MsG0680035824.01.T01 MTR_8g101580 26.946 334 189 13 23 346 50 338 1.40e-18 87.4
MsG0680035824.01.T01 MTR_4g109270 24.372 398 234 10 22 401 11 359 2.63e-18 86.3
MsG0680035824.01.T01 MTR_5g070130 24.384 406 247 15 13 399 5 369 2.86e-18 86.3
MsG0680035824.01.T01 MTR_4g117780 26.357 387 240 14 22 401 14 362 3.08e-18 85.9
MsG0680035824.01.T01 MTR_2g025420 27.401 354 199 16 22 348 9 331 4.02e-18 86.3
MsG0680035824.01.T01 MTR_2g031640 26.757 370 211 17 22 373 9 336 5.24e-18 85.5
MsG0680035824.01.T01 MTR_2g426090 26.289 388 211 19 22 376 9 354 7.94e-18 85.1
MsG0680035824.01.T01 MTR_2g021050 24.934 377 207 17 22 376 8 330 1.72e-17 84.0
MsG0680035824.01.T01 MTR_2g025960 27.426 237 133 11 116 338 4 215 4.30e-17 81.6
MsG0680035824.01.T01 MTR_4g023090 26.488 336 210 10 6 339 3 303 4.66e-17 82.8
MsG0680035824.01.T01 MTR_8g013010 27.875 287 170 11 10 289 42 298 7.03e-17 81.3
MsG0680035824.01.T01 MTR_8g041440 45.652 92 39 2 12 103 8 88 7.41e-17 76.6
MsG0680035824.01.T01 MTR_3g034180 24.627 402 256 15 13 401 117 484 8.07e-17 82.4
MsG0680035824.01.T01 MTR_5g070088 24.574 411 255 14 14 401 2 380 9.60e-17 81.6
MsG0680035824.01.T01 MTR_2g031680 25.134 374 227 15 15 375 2 335 9.89e-17 81.6
MsG0680035824.01.T01 MTR_4g117720 28.904 301 160 16 117 400 110 373 1.46e-16 80.9
MsG0680035824.01.T01 MTR_4g117770 24.552 391 250 14 18 401 10 362 2.48e-16 80.1
MsG0680035824.01.T01 MTR_4g117810 24.552 391 250 14 18 401 10 362 2.48e-16 80.1
MsG0680035824.01.T01 MTR_2g024100 24.505 404 226 17 33 402 21 379 3.78e-16 80.1
MsG0680035824.01.T01 MTR_5g057790 24.615 325 194 11 22 338 49 330 7.85e-16 79.0
MsG0680035824.01.T01 MTR_1g037540 23.457 405 224 16 22 377 8 375 9.26e-16 79.0
MsG0680035824.01.T01 MTR_5g070080 23.389 419 253 14 11 401 2 380 1.02e-15 78.6
MsG0680035824.01.T01 MTR_4g117850 25.062 403 224 16 22 400 26 374 1.24e-15 78.2
MsG0680035824.01.T01 MTR_3g007410 26.380 326 191 14 22 339 55 339 2.32e-15 77.8
MsG0680035824.01.T01 MTR_3g047580 39.568 139 65 5 11 146 5 127 5.22e-15 71.6
MsG0680035824.01.T01 MTR_1g097490 25.000 388 239 16 3 384 33 374 6.07e-15 76.3
MsG0680035824.01.T01 MTR_1g050542 26.934 349 198 15 21 362 60 358 6.67e-15 76.3
MsG0680035824.01.T01 MTR_6g087660 56.250 80 28 2 4 76 2 81 8.00e-15 73.2
MsG0680035824.01.T01 MTR_3g007360 26.074 326 192 14 22 339 55 339 1.45e-14 75.1
MsG0680035824.01.T01 MTR_2g046900 26.269 335 191 14 18 338 27 319 2.17e-14 74.7
MsG0680035824.01.T01 MTR_2g046830 25.893 336 202 14 18 346 24 319 3.42e-14 73.9
MsG0680035824.01.T01 MTR_4g055060 26.380 326 200 14 22 341 33 324 1.03e-13 72.4
MsG0680035824.01.T01 MTR_8g467140 26.994 326 194 12 18 338 31 317 1.48e-13 71.6
MsG0680035824.01.T01 MTR_3g097190 53.704 54 25 0 323 376 28 81 1.58e-13 68.9
MsG0680035824.01.T01 MTR_2g021150 25.672 335 198 15 18 341 13 307 1.68e-13 71.6
MsG0680035824.01.T01 MTR_3g047540 46.512 86 37 4 218 302 6 83 1.85e-13 66.2
MsG0680035824.01.T01 MTR_4g117750 25.131 382 227 15 32 399 16 352 2.13e-13 72.0
MsG0680035824.01.T01 MTR_6g065980 23.450 371 213 15 22 382 19 328 3.50e-13 70.9
MsG0680035824.01.T01 MTR_4g023120 25.846 325 192 14 22 338 6 289 5.69e-13 70.1
MsG0680035824.01.T01 MTR_4g107820 25.688 327 187 11 21 338 38 317 5.73e-13 70.1
MsG0680035824.01.T01 MTR_4g107780 25.688 327 187 11 21 338 38 317 5.73e-13 70.1
MsG0680035824.01.T01 MTR_4g107820 25.688 327 187 11 21 338 38 317 6.58e-13 70.1
MsG0680035824.01.T01 MTR_7g070440 23.697 422 221 15 18 398 6 367 6.87e-13 70.1
MsG0680035824.01.T01 MTR_4g023070 25.846 325 192 14 22 338 6 289 7.39e-13 69.7
MsG0680035824.01.T01 MTR_3g007430 24.552 391 199 19 22 388 46 364 7.83e-13 69.7
MsG0680035824.01.T01 MTR_4g107780 25.688 327 187 11 21 338 38 317 8.54e-13 69.7
MsG0680035824.01.T01 MTR_3g014570 24.363 353 213 19 22 365 32 339 8.93e-13 69.7
MsG0680035824.01.T01 MTR_4g080200 22.798 386 224 18 21 387 5 335 9.97e-13 69.3
MsG0680035824.01.T01 MTR_1g050305 45.238 84 41 2 304 382 21 104 1.03e-12 65.5
MsG0680035824.01.T01 MTR_7g079370 24.242 297 191 12 117 403 82 354 1.34e-12 68.9
MsG0680035824.01.T01 MTR_7g407070 25.691 362 215 17 22 365 35 360 1.86e-12 68.9
MsG0680035824.01.T01 MTR_3g009310 23.867 331 200 13 22 345 45 330 2.21e-12 68.6
MsG0680035824.01.T01 MTR_3g014540 23.421 380 225 17 22 393 32 353 3.98e-12 67.8
MsG0680035824.01.T01 MTR_3g013770 25.348 359 206 15 22 365 36 347 7.00e-12 67.0
MsG0680035824.01.T01 MTR_3g034160 22.963 405 259 14 13 401 3 370 7.07e-12 67.0
MsG0680035824.01.T01 MTR_2g029990 25.641 351 211 15 22 365 54 361 9.97e-12 66.6
MsG0680035824.01.T01 MTR_4g024890 24.118 340 196 11 21 339 12 310 4.03e-11 64.7
MsG0680035824.01.T01 MTR_1g009110 24.926 337 199 16 22 341 17 316 4.70e-11 64.3
MsG0680035824.01.T01 MTR_4g023440 28.980 245 131 10 18 257 17 223 5.36e-11 63.9
MsG0680035824.01.T01 MTR_8g090195 50.000 56 28 0 322 377 58 113 5.83e-11 59.7
MsG0680035824.01.T01 MTR_8g041490 35.537 121 55 4 11 131 7 104 7.27e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035824.01.T01 AT4G12560 24.804 383 222 16 22 378 7 349 9.79e-18 85.1
MsG0680035824.01.T01 AT4G12560 24.804 383 222 16 22 378 7 349 9.79e-18 85.1
MsG0680035824.01.T01 AT4G12560 24.804 383 222 16 22 378 7 349 9.79e-18 85.1
MsG0680035824.01.T01 AT3G06240 22.753 356 198 14 22 337 39 357 2.36e-14 74.7
MsG0680035824.01.T01 AT3G16210 23.692 325 185 14 15 335 1 266 4.58e-12 67.4

Find 90 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGACAAAACTCTTCGTTAT+TGG 0.191261 6:+112846771 MsG0680035824.01.T01:CDS
ATCATTATTTCTTGTCTTCA+TGG 0.212024 6:+112846267 MsG0680035824.01.T01:CDS
AATTCTTCTTCAAATAGATT+TGG 0.232578 6:-112846078 None:intergenic
CTTAAGTCTTTAAAGCGATT+TGG 0.255130 6:+112845874 MsG0680035824.01.T01:CDS
AGATTTAATAGATTGGTAAT+TGG 0.262145 6:-112846189 None:intergenic
ATAAACTTGGCGGTGTTAAA+TGG 0.277192 6:+112846666 MsG0680035824.01.T01:CDS
ATTCTTCTTCAAATAGATTT+GGG 0.307431 6:-112846077 None:intergenic
ATTTCTTGTCTTCATGGCTT+TGG 0.312716 6:+112846273 MsG0680035824.01.T01:CDS
CATCAACGTCCGAGGGTATC+GGG 0.325331 6:-112846617 None:intergenic
AAGCAAGCTCCTCAATCGTT+TGG 0.351270 6:-112846893 None:intergenic
GATTTAATAGATTGGTAATT+GGG 0.362917 6:-112846188 None:intergenic
TAAATATCCTTAACAGCATC+TGG 0.364510 6:-112846243 None:intergenic
AATCGCTTTAAAGACTTAAG+AGG 0.367877 6:-112845871 None:intergenic
GTTCGGTATCCCATTGGAAT+GGG 0.368208 6:+112846807 MsG0680035824.01.T01:CDS
TAACTACGTATTCCACCAAT+TGG 0.383310 6:-112846969 None:intergenic
ACATGGATGGGTTCTGTCAT+TGG 0.383720 6:+112846520 MsG0680035824.01.T01:CDS
GATACCAAACATGGTCCAAC+TGG 0.395728 6:-112846561 None:intergenic
CCGTGGTACATGCGACTATA+AGG 0.409571 6:+112846302 MsG0680035824.01.T01:CDS
AGAATACAAAACATCTTCTT+CGG 0.414692 6:-112846013 None:intergenic
AACAAAAGCATATTTCCAAT+TGG 0.420398 6:+112846954 MsG0680035824.01.T01:CDS
ATAGCTTAAGAAGTAATTCA+TGG 0.421433 6:+112846439 MsG0680035824.01.T01:CDS
GTTCTTGCAAAATTACTTTG+TGG 0.422140 6:+112846163 MsG0680035824.01.T01:CDS
ATATGTTCCAGATGCTGTTA+AGG 0.425833 6:+112846236 MsG0680035824.01.T01:CDS
CCCCTTGTCCCCATTCCAAT+GGG 0.430887 6:-112846816 None:intergenic
AAGAGGCAGTTTGTATAGAA+TGG 0.432369 6:-112845854 None:intergenic
ATTCGTCGTGTACACTTTGT+AGG 0.433570 6:+112846327 MsG0680035824.01.T01:CDS
AGGAATGAGATTTAATAGAT+TGG 0.434066 6:-112846196 None:intergenic
CCCATTGGAATGGGGACAAG+GGG 0.437924 6:+112846816 MsG0680035824.01.T01:CDS
GTGCCATTCGAAGATTTACT+TGG 0.439596 6:+112846384 MsG0680035824.01.T01:CDS
ATACAATGTGGTTTGATTGT+CGG 0.440897 6:+112846919 MsG0680035824.01.T01:CDS
AGCAAGCTCCTCAATCGTTT+GGG 0.441782 6:-112846892 None:intergenic
TAGTCCAGTTGGACCATGTT+TGG 0.444108 6:+112846557 MsG0680035824.01.T01:CDS
TAAACTTGGCGGTGTTAAAT+GGG 0.446226 6:+112846667 MsG0680035824.01.T01:CDS
TCATCAACGTCCGAGGGTAT+CGG 0.448684 6:-112846618 None:intergenic
CGTTCGGTATCCCATTGGAA+TGG 0.450881 6:+112846806 MsG0680035824.01.T01:CDS
CGAGGGCATCCAAGCGTACA+TGG 0.457159 6:+112846503 MsG0680035824.01.T01:CDS
AAAAGCATATTTCCAATTGG+TGG 0.457682 6:+112846957 MsG0680035824.01.T01:CDS
TTGGATCGCTGTCTTGCGTT+CGG 0.465472 6:+112846790 MsG0680035824.01.T01:CDS
AGAATAATGAAAAGGTAAGC+AGG 0.485166 6:+112845806 MsG0680035824.01.T01:CDS
TTGGATGCGTTCGTAAATCA+TGG 0.492437 6:+112845893 MsG0680035824.01.T01:CDS
TCTGGAACATATGACTCAAC+CGG 0.492867 6:-112846225 None:intergenic
AACATATGACTCAACCGGAC+TGG 0.495645 6:-112846220 None:intergenic
ATACAACTTTAGACCAGGTA+TGG 0.500623 6:+112846409 MsG0680035824.01.T01:CDS
ATCCCATTGGAATGGGGACA+AGG 0.505020 6:+112846814 MsG0680035824.01.T01:CDS
AAATCTCATTCCTCCCAGTC+CGG 0.505528 6:+112846206 MsG0680035824.01.T01:CDS
AACTAGGCGTGAAAGAATCC+TGG 0.507147 6:+112846751 MsG0680035824.01.T01:CDS
AAATCTTCGAATGGCACGTA+GGG 0.508580 6:-112846378 None:intergenic
GGCATCCAAGCGTACATGGA+TGG 0.514144 6:+112846507 MsG0680035824.01.T01:CDS
TTTGAGCACCCAAACGATTG+AGG 0.517863 6:+112846884 MsG0680035824.01.T01:CDS
GAGAATAAGAAGAAATCAGT+GGG 0.521234 6:+112845781 MsG0680035824.01.T01:CDS
GAAAAGATGAACAACTAGCT+TGG 0.521978 6:+112846856 MsG0680035824.01.T01:CDS
TCTTGCGTTCGGTATCCCAT+TGG 0.528651 6:+112846801 MsG0680035824.01.T01:CDS
CCATTGGAATGGGGACAAGG+GGG 0.529392 6:+112846817 MsG0680035824.01.T01:CDS
AGTGGGGAAGAATAATGAAA+AGG 0.533136 6:+112845798 MsG0680035824.01.T01:CDS
TGCAAAGATAATAGTCCAGT+TGG 0.533671 6:+112846546 MsG0680035824.01.T01:CDS
CATTGGAATGGGGACAAGGG+GGG 0.537654 6:+112846818 MsG0680035824.01.T01:CDS
ATTATATGAGAGCAAGGCAA+TGG 0.538497 6:-112846691 None:intergenic
CCGAGCACCTATCATGCTAA+AGG 0.539782 6:+112845981 MsG0680035824.01.T01:CDS
ACATATGACTCAACCGGACT+GGG 0.544462 6:-112846219 None:intergenic
AGAACCCATCCATGTACGCT+TGG 0.552404 6:-112846512 None:intergenic
ATCATTTAACTTAAGCAATG+AGG 0.556637 6:+112846581 MsG0680035824.01.T01:CDS
CTTCACAACCCCGATACCCT+CGG 0.560655 6:+112846608 MsG0680035824.01.T01:CDS
TTGCGGAACAAGTTCATGAA+AGG 0.562245 6:-112845937 None:intergenic
GCATCCAAGCGTACATGGAT+GGG 0.571506 6:+112846508 MsG0680035824.01.T01:CDS
AGCTATATATCTCCCATACC+TGG 0.571824 6:-112846422 None:intergenic
TTTGGTCTGGGTAGTAGCGA+TGG 0.573756 6:+112846117 MsG0680035824.01.T01:CDS
CATGGCTTTGGTTATGACCG+TGG 0.574250 6:+112846285 MsG0680035824.01.T01:CDS
GGGTTATTTGTATTGTGACG+AGG 0.577545 6:+112846485 MsG0680035824.01.T01:CDS
TCCCATTGGAATGGGGACAA+GGG 0.580969 6:+112846815 MsG0680035824.01.T01:CDS
TAAAGCAAAGTGGATAAACT+TGG 0.581314 6:+112846653 MsG0680035824.01.T01:CDS
ATCAACGTCCGAGGGTATCG+GGG 0.582389 6:-112846616 None:intergenic
GGTTATTTGTATTGTGACGA+GGG 0.593004 6:+112846486 MsG0680035824.01.T01:CDS
AAAACAATCATCAACGTCCG+AGG 0.599660 6:-112846625 None:intergenic
AGCAAAGTGGATAAACTTGG+CGG 0.608900 6:+112846656 MsG0680035824.01.T01:CDS
CCTTTAGCATGATAGGTGCT+CGG 0.613730 6:-112845981 None:intergenic
TCTCCAAGTAAATCTTCGAA+TGG 0.615776 6:-112846387 None:intergenic
GGAGAATAAGAAGAAATCAG+TGG 0.622232 6:+112845780 MsG0680035824.01.T01:CDS
TGGAGATACAACTTTAGACC+AGG 0.624534 6:+112846404 MsG0680035824.01.T01:CDS
TACAACTTTAGACCAGGTAT+GGG 0.625852 6:+112846410 MsG0680035824.01.T01:CDS
TTCGGTATCCCATTGGAATG+GGG 0.630101 6:+112846808 MsG0680035824.01.T01:CDS
AGTTAGATATGAAATTGTTG+CGG 0.639181 6:-112845954 None:intergenic
CGAATGGCACGTAGGGACGA+AGG 0.653711 6:-112846371 None:intergenic
TAAATCTTCGAATGGCACGT+AGG 0.656705 6:-112846379 None:intergenic
AAGTTAAATGATACCAAACA+TGG 0.662055 6:-112846570 None:intergenic
AAACAATCATCAACGTCCGA+GGG 0.664566 6:-112846624 None:intergenic
TCGTCACAATACAAATAACC+CGG 0.666999 6:-112846483 None:intergenic
AGCTTGCTTATAATACAATG+TGG 0.669290 6:+112846907 MsG0680035824.01.T01:CDS
CCTTATAGTCGCATGTACCA+CGG 0.676453 6:-112846302 None:intergenic
TATGACTCAACCGGACTGGG+AGG 0.696111 6:-112846216 None:intergenic
AGAATAAGAAGAAATCAGTG+GGG 0.743012 6:+112845782 MsG0680035824.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCTTCTTCAAATAGATT+TGG - Chr6:112846081-112846100 None:intergenic 20.0%
!! ATTCTTCTTCAAATAGATTT+GGG - Chr6:112846080-112846099 None:intergenic 20.0%
!!! AGATTTAATAGATTGGTAAT+TGG - Chr6:112846192-112846211 None:intergenic 20.0%
!!! GATTTAATAGATTGGTAATT+GGG - Chr6:112846191-112846210 None:intergenic 20.0%
!!! TTTAGCAATTTTCAGATTTT+TGG + Chr6:112846099-112846118 MsG0680035824.01.T01:CDS 20.0%
! AAGTTAAATGATACCAAACA+TGG - Chr6:112846573-112846592 None:intergenic 25.0%
! AGAATACAAAACATCTTCTT+CGG - Chr6:112846016-112846035 None:intergenic 25.0%
! AGGAATGAGATTTAATAGAT+TGG - Chr6:112846199-112846218 None:intergenic 25.0%
! AGTTAGATATGAAATTGTTG+CGG - Chr6:112845957-112845976 None:intergenic 25.0%
! ATAGCTTAAGAAGTAATTCA+TGG + Chr6:112846439-112846458 MsG0680035824.01.T01:CDS 25.0%
!! AACAAAAGCATATTTCCAAT+TGG + Chr6:112846954-112846973 MsG0680035824.01.T01:CDS 25.0%
!! ATCATTATTTCTTGTCTTCA+TGG + Chr6:112846267-112846286 MsG0680035824.01.T01:CDS 25.0%
!! ATCATTTAACTTAAGCAATG+AGG + Chr6:112846581-112846600 MsG0680035824.01.T01:CDS 25.0%
!! GATGTTTTGTATTCTTTTTC+TGG + Chr6:112846021-112846040 MsG0680035824.01.T01:CDS 25.0%
!!! AATTTTCAGATTTTTGGTCT+GGG + Chr6:112846105-112846124 MsG0680035824.01.T01:CDS 25.0%
AGAATAAGAAGAAATCAGTG+GGG + Chr6:112845782-112845801 MsG0680035824.01.T01:CDS 30.0%
AGAATAATGAAAAGGTAAGC+AGG + Chr6:112845806-112845825 MsG0680035824.01.T01:CDS 30.0%
ATACAATGTGGTTTGATTGT+CGG + Chr6:112846919-112846938 MsG0680035824.01.T01:CDS 30.0%
GAGAATAAGAAGAAATCAGT+GGG + Chr6:112845781-112845800 MsG0680035824.01.T01:CDS 30.0%
GTTCTTGCAAAATTACTTTG+TGG + Chr6:112846163-112846182 MsG0680035824.01.T01:CDS 30.0%
TAAAGCAAAGTGGATAAACT+TGG + Chr6:112846653-112846672 MsG0680035824.01.T01:CDS 30.0%
TAAATATCCTTAACAGCATC+TGG - Chr6:112846246-112846265 None:intergenic 30.0%
TCAAAAACCTTTAGCATGAT+AGG - Chr6:112845991-112846010 None:intergenic 30.0%
! AAAAGCATATTTCCAATTGG+TGG + Chr6:112846957-112846976 MsG0680035824.01.T01:CDS 30.0%
! AGCTTGCTTATAATACAATG+TGG + Chr6:112846907-112846926 MsG0680035824.01.T01:CDS 30.0%
! ATATCAATTTTGAGCGAACT+AGG + Chr6:112846735-112846754 MsG0680035824.01.T01:CDS 30.0%
! CTTTTCATTATATGAGAGCA+AGG - Chr6:112846700-112846719 None:intergenic 30.0%
! TTTTGCAAGAACTTAGTTCA+TGG - Chr6:112846155-112846174 None:intergenic 30.0%
!! AATCGCTTTAAAGACTTAAG+AGG - Chr6:112845874-112845893 None:intergenic 30.0%
!! CTTAAGTCTTTAAAGCGATT+TGG + Chr6:112845874-112845893 MsG0680035824.01.T01:CDS 30.0%
!! GTTTTGATGTTAAAGCAAAG+TGG + Chr6:112846643-112846662 MsG0680035824.01.T01:CDS 30.0%
!!! CAATTTTCAGATTTTTGGTC+TGG + Chr6:112846104-112846123 MsG0680035824.01.T01:CDS 30.0%
AAGAGGCAGTTTGTATAGAA+TGG - Chr6:112845857-112845876 None:intergenic 35.0%
AGTGGGGAAGAATAATGAAA+AGG + Chr6:112845798-112845817 MsG0680035824.01.T01:CDS 35.0%
ATACAACTTTAGACCAGGTA+TGG + Chr6:112846409-112846428 MsG0680035824.01.T01:CDS 35.0%
ATATGTTCCAGATGCTGTTA+AGG + Chr6:112846236-112846255 MsG0680035824.01.T01:CDS 35.0%
ATTATATGAGAGCAAGGCAA+TGG - Chr6:112846694-112846713 None:intergenic 35.0%
ATTTCTTGTCTTCATGGCTT+TGG + Chr6:112846273-112846292 MsG0680035824.01.T01:CDS 35.0%
GAAAAGATGAACAACTAGCT+TGG + Chr6:112846856-112846875 MsG0680035824.01.T01:CDS 35.0%
GGAGAATAAGAAGAAATCAG+TGG + Chr6:112845780-112845799 MsG0680035824.01.T01:CDS 35.0%
GGTTATTTGTATTGTGACGA+GGG + Chr6:112846486-112846505 MsG0680035824.01.T01:CDS 35.0%
TAACTACGTATTCCACCAAT+TGG - Chr6:112846972-112846991 None:intergenic 35.0%
TACAACTTTAGACCAGGTAT+GGG + Chr6:112846410-112846429 MsG0680035824.01.T01:CDS 35.0%
TCGTCACAATACAAATAACC+CGG - Chr6:112846486-112846505 None:intergenic 35.0%
TCTCCAAGTAAATCTTCGAA+TGG - Chr6:112846390-112846409 None:intergenic 35.0%
TGCAAAGATAATAGTCCAGT+TGG + Chr6:112846546-112846565 MsG0680035824.01.T01:CDS 35.0%
TGGACAAAACTCTTCGTTAT+TGG + Chr6:112846771-112846790 MsG0680035824.01.T01:CDS 35.0%
! AAACTTGATTTTCACATGCC+GGG + Chr6:112846465-112846484 MsG0680035824.01.T01:CDS 35.0%
! ATAAACTTGGCGGTGTTAAA+TGG + Chr6:112846666-112846685 MsG0680035824.01.T01:CDS 35.0%
! GAAACTTGATTTTCACATGC+CGG + Chr6:112846464-112846483 MsG0680035824.01.T01:CDS 35.0%
! TAAACTTGGCGGTGTTAAAT+GGG + Chr6:112846667-112846686 MsG0680035824.01.T01:CDS 35.0%
!! AATAACGAAGAGTTTTGTCC+AGG - Chr6:112846772-112846791 None:intergenic 35.0%
!! TGTATTCTTTTTCTGGTCAG+AGG + Chr6:112846028-112846047 MsG0680035824.01.T01:CDS 35.0%
AAAACAATCATCAACGTCCG+AGG - Chr6:112846628-112846647 None:intergenic 40.0%
AAACAATCATCAACGTCCGA+GGG - Chr6:112846627-112846646 None:intergenic 40.0%
AAATCTTCGAATGGCACGTA+GGG - Chr6:112846381-112846400 None:intergenic 40.0%
AGCAAAGTGGATAAACTTGG+CGG + Chr6:112846656-112846675 MsG0680035824.01.T01:CDS 40.0%
AGCTATATATCTCCCATACC+TGG - Chr6:112846425-112846444 None:intergenic 40.0%
ATTCGTCGTGTACACTTTGT+AGG + Chr6:112846327-112846346 MsG0680035824.01.T01:CDS 40.0%
GGGTTATTTGTATTGTGACG+AGG + Chr6:112846485-112846504 MsG0680035824.01.T01:CDS 40.0%
TAAATCTTCGAATGGCACGT+AGG - Chr6:112846382-112846401 None:intergenic 40.0%
TGGAGATACAACTTTAGACC+AGG + Chr6:112846404-112846423 MsG0680035824.01.T01:CDS 40.0%
TTGCGGAACAAGTTCATGAA+AGG - Chr6:112845940-112845959 None:intergenic 40.0%
TTGGATGCGTTCGTAAATCA+TGG + Chr6:112845893-112845912 MsG0680035824.01.T01:CDS 40.0%
! GTGCCATTCGAAGATTTACT+TGG + Chr6:112846384-112846403 MsG0680035824.01.T01:CDS 40.0%
! TCTGGAACATATGACTCAAC+CGG - Chr6:112846228-112846247 None:intergenic 40.0%
AAATCTCATTCCTCCCAGTC+CGG + Chr6:112846206-112846225 MsG0680035824.01.T01:CDS 45.0%
AACATATGACTCAACCGGAC+TGG - Chr6:112846223-112846242 None:intergenic 45.0%
AACTAGGCGTGAAAGAATCC+TGG + Chr6:112846751-112846770 MsG0680035824.01.T01:CDS 45.0%
AAGCAAGCTCCTCAATCGTT+TGG - Chr6:112846896-112846915 None:intergenic 45.0%
ACATATGACTCAACCGGACT+GGG - Chr6:112846222-112846241 None:intergenic 45.0%
AGCAAGCTCCTCAATCGTTT+GGG - Chr6:112846895-112846914 None:intergenic 45.0%
CCTTATAGTCGCATGTACCA+CGG - Chr6:112846305-112846324 None:intergenic 45.0%
CCTTTAGCATGATAGGTGCT+CGG - Chr6:112845984-112846003 None:intergenic 45.0%
GATACCAAACATGGTCCAAC+TGG - Chr6:112846564-112846583 None:intergenic 45.0%
GTTCGGTATCCCATTGGAAT+GGG + Chr6:112846807-112846826 MsG0680035824.01.T01:CDS 45.0%
TAGTCCAGTTGGACCATGTT+TGG + Chr6:112846557-112846576 MsG0680035824.01.T01:CDS 45.0%
TTCGGTATCCCATTGGAATG+GGG + Chr6:112846808-112846827 MsG0680035824.01.T01:CDS 45.0%
TTTGAGCACCCAAACGATTG+AGG + Chr6:112846884-112846903 MsG0680035824.01.T01:CDS 45.0%
! ACATGGATGGGTTCTGTCAT+TGG + Chr6:112846520-112846539 MsG0680035824.01.T01:CDS 45.0%
AGAACCCATCCATGTACGCT+TGG - Chr6:112846515-112846534 None:intergenic 50.0%
ATCCCATTGGAATGGGGACA+AGG + Chr6:112846814-112846833 MsG0680035824.01.T01:CDS 50.0%
CCGAGCACCTATCATGCTAA+AGG + Chr6:112845981-112846000 MsG0680035824.01.T01:CDS 50.0%
CCGTGGTACATGCGACTATA+AGG + Chr6:112846302-112846321 MsG0680035824.01.T01:CDS 50.0%
CGTTCGGTATCCCATTGGAA+TGG + Chr6:112846806-112846825 MsG0680035824.01.T01:CDS 50.0%
GCATCCAAGCGTACATGGAT+GGG + Chr6:112846508-112846527 MsG0680035824.01.T01:CDS 50.0%
TCCCATTGGAATGGGGACAA+GGG + Chr6:112846815-112846834 MsG0680035824.01.T01:CDS 50.0%
TCTTGCGTTCGGTATCCCAT+TGG + Chr6:112846801-112846820 MsG0680035824.01.T01:CDS 50.0%
TTGGATCGCTGTCTTGCGTT+CGG + Chr6:112846790-112846809 MsG0680035824.01.T01:CDS 50.0%
TTTGGTCTGGGTAGTAGCGA+TGG + Chr6:112846117-112846136 MsG0680035824.01.T01:CDS 50.0%
! TCATCAACGTCCGAGGGTAT+CGG - Chr6:112846621-112846640 None:intergenic 50.0%
!! CATGGCTTTGGTTATGACCG+TGG + Chr6:112846285-112846304 MsG0680035824.01.T01:CDS 50.0%
CATTGGAATGGGGACAAGGG+GGG + Chr6:112846818-112846837 MsG0680035824.01.T01:CDS 55.0%
CCATTGGAATGGGGACAAGG+GGG + Chr6:112846817-112846836 MsG0680035824.01.T01:CDS 55.0%
CCCATTGGAATGGGGACAAG+GGG + Chr6:112846816-112846835 MsG0680035824.01.T01:CDS 55.0%
CCCCTTGTCCCCATTCCAAT+GGG - Chr6:112846819-112846838 None:intergenic 55.0%
CTTCACAACCCCGATACCCT+CGG + Chr6:112846608-112846627 MsG0680035824.01.T01:CDS 55.0%
GGCATCCAAGCGTACATGGA+TGG + Chr6:112846507-112846526 MsG0680035824.01.T01:CDS 55.0%
! TATGACTCAACCGGACTGGG+AGG - Chr6:112846219-112846238 None:intergenic 55.0%
!! ATCAACGTCCGAGGGTATCG+GGG - Chr6:112846619-112846638 None:intergenic 55.0%
!! CATCAACGTCCGAGGGTATC+GGG - Chr6:112846620-112846639 None:intergenic 55.0%
CCCCCTTGTCCCCATTCCAA+TGG - Chr6:112846820-112846839 None:intergenic 60.0%
CGAATGGCACGTAGGGACGA+AGG - Chr6:112846374-112846393 None:intergenic 60.0%
!! CGAGGGCATCCAAGCGTACA+TGG + Chr6:112846503-112846522 MsG0680035824.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 112845778 112846992 112845778 ID=MsG0680035824.01;Name=MsG0680035824.01
Chr6 mRNA 112845778 112846992 112845778 ID=MsG0680035824.01.T01;Parent=MsG0680035824.01;Name=MsG0680035824.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|404
Chr6 exon 112845778 112846992 112845778 ID=MsG0680035824.01.T01:exon:9707;Parent=MsG0680035824.01.T01
Chr6 CDS 112845778 112846992 112845778 ID=MsG0680035824.01.T01:cds;Parent=MsG0680035824.01.T01
Gene Sequence

>MsG0680035824.01.T01

ATGGAGAATAAGAAGAAATCAGTGGGGAAGAATAATGAAAAGGTAAGCAGGTATATACATGATGATATTGTCTTCTCCATTCTATACAAACTGCCTCTTAAGTCTTTAAAGCGATTTGGATGCGTTCGTAAATCATGGTCTCTCTTATTACAAAACACTCCTTTCATGAACTTGTTCCGCAACAATTTCATATCTAACTCTCACCGAGCACCTATCATGCTAAAGGTTTTTGAATCCGAAGAAGATGTTTTGTATTCTTTTTCTGGTCAGAGGTTTGAGAATAAAATCAAATTAGATTGCCCAAATCTATTTGAAGAAGAATTTAGCAATTTTCAGATTTTTGGTCTGGGTAGTAGCGATGGCACTCTTTGTCTCCATGAACTAAGTTCTTGCAAAATTACTTTGTGGAACCCAATTACCAATCTATTAAATCTCATTCCTCCCAGTCCGGTTGAGTCATATGTTCCAGATGCTGTTAAGGATATTTATATCATTATTTCTTGTCTTCATGGCTTTGGTTATGACCGTGGTACATGCGACTATAAGGTCATTCGTCGTGTACACTTTGTAGGTCAAAACTTTCTAAGTTATGACCTTCGTCCCTACGTGCCATTCGAAGATTTACTTGGAGATACAACTTTAGACCAGGTATGGGAGATATATAGCTTAAGAAGTAATTCATGGAAGAAACTTGATTTTCACATGCCGGGTTATTTGTATTGTGACGAGGGCATCCAAGCGTACATGGATGGGTTCTGTCATTGGTTGTGCAAAGATAATAGTCCAGTTGGACCATGTTTGGTATCATTTAACTTAAGCAATGAGGTGTTCTTCACAACCCCGATACCCTCGGACGTTGATGATTGTTTTGATGTTAAAGCAAAGTGGATAAACTTGGCGGTGTTAAATGGGTCCATTGCCTTGCTCTCATATAATGAAAAGATTACAACTTTTAACATATCAATTTTGAGCGAACTAGGCGTGAAAGAATCCTGGACAAAACTCTTCGTTATTGGATCGCTGTCTTGCGTTCGGTATCCCATTGGAATGGGGACAAGGGGGGAAATATTCTTCGTAAGAAAAGATGAACAACTAGCTTGGTTTGATTTGAGCACCCAAACGATTGAGGAGCTTGCTTATAATACAATGTGGTTTGATTGTCGGATAATAATTTACAACAAAAGCATATTTCCAATTGGTGGAATACGTAGTTAA
Protein sequence

>MsG0680035824.01.T01

MENKKKSVGKNNEKVSRYIHDDIVFSILYKLPLKSLKRFGCVRKSWSLLLQNTPFMNLFRNNFISNSHRAPIMLKVFESEEDVLYSFSGQRFENKIKLDCPNLFEEEFSNFQIFGLGSSDGTLCLHELSSCKITLWNPITNLLNLIPPSPVESYVPDAVKDIYIIISCLHGFGYDRGTCDYKVIRRVHFVGQNFLSYDLRPYVPFEDLLGDTTLDQVWEIYSLRSNSWKKLDFHMPGYLYCDEGIQAYMDGFCHWLCKDNSPVGPCLVSFNLSNEVFFTTPIPSDVDDCFDVKAKWINLAVLNGSIALLSYNEKITTFNISILSELGVKESWTKLFVIGSLSCVRYPIGMGTRGEIFFVRKDEQLAWFDLSTQTIEELAYNTMWFDCRIIIYNKSIFPIGGIRS*