Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044046.01.T01 | XP_003628254.1 | 93.21 | 324 | 21 | 1 | 1 | 323 | 55 | 378 | 0 | 624 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044046.01.T01 | Q8GXC7 | 30.542 | 203 | 119 | 9 | 66 | 256 | 165 | 357 | 1.21E-17 | 86.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000470.01 | MsG0880044046.01 | 0.815184 | 1.052844e-51 | 7.208014e-49 |
MsG0280006324.01 | MsG0880044046.01 | 0.805359 | 1.387003e-49 | 7.323172e-47 |
MsG0280010722.01 | MsG0880044046.01 | 0.807158 | 5.794114e-50 | 3.203789e-47 |
MsG0680032157.01 | MsG0880044046.01 | 0.812783 | 3.563791e-51 | 2.286460e-48 |
MsG0480022259.01 | MsG0880044046.01 | 0.818305 | 2.101035e-52 | 1.566927e-49 |
MsG0480022262.01 | MsG0880044046.01 | 0.803979 | 2.692365e-49 | 1.371975e-46 |
MsG0580024038.01 | MsG0880044046.01 | 0.801604 | 8.325735e-49 | 3.992537e-46 |
MsG0780038439.01 | MsG0880044046.01 | 0.815102 | 1.097872e-51 | 7.499434e-49 |
MsG0780039631.01 | MsG0880044046.01 | 0.810595 | 1.066038e-50 | 6.452902e-48 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044046.01.T01 | MTR_8g046310 | 93.210 | 324 | 21 | 1 | 1 | 323 | 55 | 378 | 0.0 | 624 |
MsG0880044046.01.T01 | MTR_8g046220 | 69.505 | 364 | 57 | 7 | 1 | 323 | 56 | 406 | 1.98e-169 | 477 |
MsG0880044046.01.T01 | MTR_8g046200 | 66.486 | 370 | 72 | 8 | 5 | 323 | 54 | 422 | 4.69e-158 | 448 |
MsG0880044046.01.T01 | MTR_1g053510 | 46.537 | 361 | 147 | 9 | 1 | 323 | 54 | 406 | 2.89e-97 | 293 |
MsG0880044046.01.T01 | MTR_8g033090 | 44.687 | 367 | 144 | 13 | 1 | 319 | 53 | 408 | 3.39e-84 | 260 |
MsG0880044046.01.T01 | MTR_8g033110 | 44.986 | 369 | 143 | 12 | 1 | 319 | 53 | 411 | 1.30e-82 | 256 |
MsG0880044046.01.T01 | MTR_8g035690 | 51.321 | 265 | 87 | 6 | 94 | 319 | 38 | 299 | 2.94e-79 | 244 |
MsG0880044046.01.T01 | MTR_8g033140 | 43.324 | 367 | 150 | 10 | 1 | 319 | 58 | 414 | 1.62e-77 | 243 |
MsG0880044046.01.T01 | MTR_8g032980 | 42.287 | 376 | 147 | 13 | 1 | 319 | 55 | 417 | 2.97e-71 | 227 |
MsG0880044046.01.T01 | MTR_8g018110 | 41.737 | 357 | 154 | 10 | 1 | 319 | 53 | 393 | 7.16e-70 | 223 |
MsG0880044046.01.T01 | MTR_0129s0070 | 41.449 | 345 | 166 | 14 | 1 | 318 | 56 | 391 | 7.46e-67 | 215 |
MsG0880044046.01.T01 | MTR_8g464770 | 41.279 | 344 | 163 | 13 | 2 | 320 | 48 | 377 | 8.56e-66 | 211 |
MsG0880044046.01.T01 | MTR_0129s0120 | 39.710 | 345 | 172 | 13 | 1 | 318 | 56 | 391 | 9.61e-64 | 207 |
MsG0880044046.01.T01 | MTR_2g104280 | 38.810 | 353 | 176 | 13 | 2 | 317 | 50 | 399 | 5.47e-61 | 200 |
MsG0880044046.01.T01 | MTR_8g033000 | 39.892 | 371 | 157 | 15 | 1 | 319 | 3 | 359 | 3.76e-60 | 196 |
MsG0880044046.01.T01 | MTR_7g017130 | 38.841 | 345 | 175 | 13 | 1 | 318 | 57 | 392 | 4.26e-60 | 197 |
MsG0880044046.01.T01 | MTR_6g086825 | 38.781 | 361 | 166 | 11 | 1 | 319 | 109 | 456 | 5.34e-60 | 199 |
MsG0880044046.01.T01 | MTR_8g063440 | 40.294 | 340 | 175 | 12 | 1 | 321 | 51 | 381 | 5.67e-60 | 197 |
MsG0880044046.01.T01 | MTR_5g097350 | 39.359 | 343 | 174 | 13 | 1 | 321 | 55 | 385 | 2.11e-59 | 195 |
MsG0880044046.01.T01 | MTR_4g102410 | 42.271 | 317 | 139 | 14 | 36 | 318 | 139 | 445 | 2.57e-59 | 197 |
MsG0880044046.01.T01 | MTR_7g017040 | 40.230 | 348 | 169 | 13 | 1 | 318 | 55 | 393 | 1.51e-58 | 193 |
MsG0880044046.01.T01 | MTR_5g097330 | 37.465 | 355 | 180 | 12 | 1 | 321 | 55 | 401 | 6.12e-58 | 192 |
MsG0880044046.01.T01 | MTR_3g011120 | 41.284 | 327 | 165 | 13 | 2 | 312 | 54 | 369 | 9.52e-58 | 191 |
MsG0880044046.01.T01 | MTR_2g104340 | 39.031 | 351 | 169 | 12 | 2 | 317 | 50 | 390 | 2.12e-57 | 191 |
MsG0880044046.01.T01 | MTR_0134s0060 | 37.669 | 369 | 163 | 15 | 2 | 317 | 52 | 406 | 2.81e-57 | 191 |
MsG0880044046.01.T01 | MTR_7g017170 | 37.430 | 358 | 176 | 14 | 1 | 319 | 57 | 405 | 3.93e-57 | 190 |
MsG0880044046.01.T01 | MTR_0129s0050 | 37.778 | 360 | 171 | 12 | 1 | 317 | 53 | 402 | 5.74e-57 | 189 |
MsG0880044046.01.T01 | MTR_2g022000 | 41.195 | 318 | 132 | 14 | 29 | 303 | 92 | 397 | 2.10e-56 | 189 |
MsG0880044046.01.T01 | MTR_6g079810 | 35.734 | 361 | 178 | 12 | 1 | 318 | 109 | 458 | 4.92e-56 | 189 |
MsG0880044046.01.T01 | MTR_2g066200 | 37.427 | 342 | 181 | 13 | 1 | 318 | 51 | 383 | 5.82e-56 | 186 |
MsG0880044046.01.T01 | MTR_5g096630 | 35.655 | 359 | 177 | 13 | 5 | 318 | 60 | 409 | 5.97e-56 | 187 |
MsG0880044046.01.T01 | MTR_4g028510 | 37.288 | 354 | 174 | 11 | 1 | 318 | 56 | 397 | 1.23e-55 | 187 |
MsG0880044046.01.T01 | MTR_2g021800 | 37.158 | 366 | 169 | 15 | 1 | 316 | 55 | 409 | 2.43e-55 | 186 |
MsG0880044046.01.T01 | MTR_2g021950 | 38.177 | 351 | 171 | 16 | 1 | 318 | 55 | 392 | 3.63e-55 | 184 |
MsG0880044046.01.T01 | MTR_0054s0090 | 39.106 | 358 | 166 | 15 | 1 | 318 | 56 | 401 | 4.51e-55 | 184 |
MsG0880044046.01.T01 | MTR_6g078010 | 36.103 | 349 | 175 | 10 | 2 | 323 | 8 | 335 | 7.39e-55 | 182 |
MsG0880044046.01.T01 | MTR_2g021770 | 36.389 | 360 | 179 | 13 | 1 | 318 | 51 | 402 | 7.44e-55 | 184 |
MsG0880044046.01.T01 | MTR_7g111700 | 39.557 | 316 | 131 | 11 | 36 | 321 | 78 | 363 | 8.85e-55 | 182 |
MsG0880044046.01.T01 | MTR_2g034700 | 39.820 | 334 | 166 | 15 | 1 | 316 | 53 | 369 | 1.60e-54 | 182 |
MsG0880044046.01.T01 | MTR_5g043605 | 40.312 | 320 | 149 | 15 | 27 | 319 | 31 | 335 | 1.86e-54 | 182 |
MsG0880044046.01.T01 | MTR_4g055820 | 41.017 | 295 | 129 | 9 | 2 | 259 | 54 | 340 | 2.16e-54 | 181 |
MsG0880044046.01.T01 | MTR_6g090180 | 36.667 | 360 | 174 | 12 | 1 | 318 | 86 | 433 | 2.99e-54 | 183 |
MsG0880044046.01.T01 | MTR_8g467670 | 37.309 | 327 | 187 | 9 | 1 | 316 | 53 | 372 | 3.70e-54 | 182 |
MsG0880044046.01.T01 | MTR_6g080680 | 37.892 | 351 | 165 | 14 | 1 | 317 | 58 | 389 | 4.96e-54 | 182 |
MsG0880044046.01.T01 | MTR_2g038680 | 38.736 | 364 | 165 | 15 | 1 | 318 | 55 | 406 | 5.61e-54 | 182 |
MsG0880044046.01.T01 | MTR_6g079770 | 37.228 | 368 | 170 | 13 | 1 | 318 | 56 | 412 | 8.51e-54 | 181 |
MsG0880044046.01.T01 | MTR_5g068490 | 41.667 | 252 | 132 | 7 | 72 | 319 | 33 | 273 | 8.60e-54 | 177 |
MsG0880044046.01.T01 | MTR_1g007450 | 36.950 | 341 | 164 | 12 | 1 | 304 | 51 | 377 | 1.96e-53 | 181 |
MsG0880044046.01.T01 | MTR_2g066170 | 38.166 | 338 | 182 | 12 | 1 | 318 | 51 | 381 | 3.92e-53 | 179 |
MsG0880044046.01.T01 | MTR_4g007940 | 37.188 | 320 | 153 | 10 | 33 | 316 | 28 | 335 | 4.43e-53 | 177 |
MsG0880044046.01.T01 | MTR_5g074800 | 36.599 | 347 | 177 | 14 | 1 | 315 | 1 | 336 | 5.64e-53 | 177 |
MsG0880044046.01.T01 | MTR_0054s0100 | 37.883 | 359 | 169 | 15 | 1 | 317 | 56 | 402 | 5.70e-53 | 179 |
MsG0880044046.01.T01 | MTR_7g079640 | 37.855 | 317 | 167 | 9 | 1 | 301 | 52 | 354 | 5.85e-53 | 178 |
MsG0880044046.01.T01 | MTR_4g117550 | 37.681 | 345 | 154 | 16 | 1 | 317 | 56 | 367 | 9.04e-53 | 177 |
MsG0880044046.01.T01 | MTR_4g028680 | 37.216 | 352 | 176 | 12 | 1 | 318 | 55 | 395 | 1.29e-52 | 178 |
MsG0880044046.01.T01 | MTR_5g096910 | 38.944 | 303 | 167 | 7 | 32 | 318 | 88 | 388 | 2.32e-52 | 177 |
MsG0880044046.01.T01 | MTR_8g012090 | 39.365 | 315 | 133 | 10 | 1 | 292 | 55 | 334 | 6.71e-52 | 174 |
MsG0880044046.01.T01 | MTR_8g041270 | 37.709 | 358 | 173 | 16 | 2 | 317 | 51 | 400 | 1.17e-51 | 176 |
MsG0880044046.01.T01 | MTR_4g028660 | 38.978 | 313 | 151 | 12 | 36 | 317 | 90 | 393 | 1.78e-51 | 175 |
MsG0880044046.01.T01 | MTR_4g027450 | 38.978 | 313 | 151 | 12 | 36 | 317 | 90 | 393 | 1.78e-51 | 175 |
MsG0880044046.01.T01 | MTR_5g022850 | 40.000 | 315 | 145 | 13 | 36 | 317 | 44 | 347 | 1.87e-51 | 174 |
MsG0880044046.01.T01 | MTR_2g065860 | 35.503 | 338 | 193 | 10 | 1 | 318 | 51 | 383 | 5.82e-51 | 173 |
MsG0880044046.01.T01 | MTR_5g037680 | 36.337 | 344 | 182 | 14 | 1 | 317 | 47 | 380 | 8.30e-51 | 174 |
MsG0880044046.01.T01 | MTR_8g039500 | 40.645 | 310 | 152 | 13 | 1 | 292 | 51 | 346 | 1.81e-50 | 171 |
MsG0880044046.01.T01 | MTR_2g064950 | 37.143 | 350 | 166 | 15 | 1 | 314 | 49 | 380 | 3.68e-50 | 171 |
MsG0880044046.01.T01 | MTR_0831s0010 | 38.286 | 350 | 162 | 16 | 1 | 318 | 89 | 416 | 7.47e-50 | 171 |
MsG0880044046.01.T01 | MTR_5g097220 | 34.865 | 370 | 177 | 13 | 1 | 321 | 52 | 406 | 8.24e-50 | 171 |
MsG0880044046.01.T01 | MTR_5g069390 | 36.056 | 355 | 185 | 13 | 1 | 319 | 65 | 413 | 1.34e-49 | 172 |
MsG0880044046.01.T01 | MTR_4g014370 | 34.795 | 365 | 181 | 13 | 1 | 318 | 50 | 404 | 7.39e-49 | 168 |
MsG0880044046.01.T01 | MTR_1g050312 | 38.408 | 289 | 155 | 8 | 30 | 312 | 13 | 284 | 2.73e-48 | 164 |
MsG0880044046.01.T01 | MTR_5g092850 | 32.231 | 363 | 189 | 9 | 1 | 322 | 55 | 401 | 4.03e-48 | 166 |
MsG0880044046.01.T01 | MTR_7g069550 | 34.637 | 358 | 172 | 16 | 1 | 315 | 53 | 391 | 5.72e-48 | 166 |
MsG0880044046.01.T01 | MTR_4g130330 | 36.137 | 321 | 152 | 14 | 38 | 318 | 79 | 386 | 1.13e-47 | 165 |
MsG0880044046.01.T01 | MTR_8g064890 | 36.257 | 342 | 181 | 15 | 1 | 318 | 55 | 383 | 2.02e-47 | 164 |
MsG0880044046.01.T01 | MTR_5g024260 | 36.036 | 333 | 172 | 14 | 1 | 301 | 61 | 384 | 2.82e-47 | 164 |
MsG0880044046.01.T01 | MTR_5g064700 | 34.921 | 378 | 171 | 18 | 1 | 318 | 1 | 363 | 3.55e-47 | 163 |
MsG0880044046.01.T01 | MTR_2g065840 | 33.728 | 338 | 200 | 10 | 1 | 318 | 51 | 384 | 4.74e-47 | 163 |
MsG0880044046.01.T01 | MTR_1g047080 | 38.123 | 341 | 125 | 13 | 1 | 319 | 3 | 279 | 7.70e-47 | 160 |
MsG0880044046.01.T01 | MTR_8g036970 | 36.656 | 311 | 146 | 11 | 1 | 303 | 37 | 304 | 9.84e-47 | 162 |
MsG0880044046.01.T01 | MTR_6g461660 | 34.659 | 352 | 188 | 13 | 1 | 321 | 58 | 398 | 1.05e-46 | 162 |
MsG0880044046.01.T01 | MTR_4g028750 | 39.510 | 286 | 142 | 9 | 36 | 295 | 90 | 370 | 1.17e-46 | 162 |
MsG0880044046.01.T01 | MTR_8g013000 | 37.615 | 327 | 148 | 14 | 1 | 286 | 49 | 360 | 1.52e-46 | 162 |
MsG0880044046.01.T01 | MTR_5g059430 | 34.986 | 363 | 187 | 15 | 1 | 319 | 65 | 422 | 3.20e-46 | 162 |
MsG0880044046.01.T01 | MTR_2g066150 | 35.758 | 330 | 170 | 12 | 4 | 318 | 53 | 355 | 3.46e-46 | 160 |
MsG0880044046.01.T01 | MTR_6g079790 | 36.190 | 315 | 150 | 9 | 45 | 319 | 2 | 305 | 3.90e-46 | 159 |
MsG0880044046.01.T01 | MTR_1g007410 | 37.975 | 316 | 150 | 13 | 33 | 315 | 96 | 398 | 4.78e-46 | 161 |
MsG0880044046.01.T01 | MTR_5g097680 | 34.048 | 373 | 185 | 15 | 1 | 318 | 56 | 422 | 5.56e-46 | 161 |
MsG0880044046.01.T01 | MTR_5g091140 | 35.775 | 355 | 174 | 14 | 1 | 323 | 87 | 419 | 6.85e-46 | 161 |
MsG0880044046.01.T01 | MTR_1g007430 | 37.500 | 304 | 153 | 10 | 1 | 281 | 35 | 324 | 4.33e-44 | 154 |
MsG0880044046.01.T01 | MTR_6g478230 | 34.366 | 355 | 180 | 12 | 1 | 319 | 66 | 403 | 7.14e-44 | 155 |
MsG0880044046.01.T01 | MTR_5g075370 | 33.429 | 350 | 168 | 14 | 1 | 303 | 49 | 380 | 2.04e-43 | 159 |
MsG0880044046.01.T01 | MTR_5g074850 | 33.908 | 348 | 166 | 14 | 1 | 303 | 76 | 404 | 2.51e-43 | 159 |
MsG0880044046.01.T01 | MTR_6g090250 | 32.718 | 379 | 187 | 11 | 1 | 319 | 50 | 420 | 1.21e-42 | 152 |
MsG0880044046.01.T01 | MTR_7g016930 | 38.078 | 281 | 129 | 11 | 1 | 260 | 55 | 311 | 1.52e-42 | 150 |
MsG0880044046.01.T01 | MTR_1g098180 | 34.694 | 343 | 162 | 14 | 1 | 319 | 58 | 362 | 1.08e-41 | 149 |
MsG0880044046.01.T01 | MTR_5g086590 | 39.912 | 228 | 123 | 8 | 78 | 295 | 8 | 231 | 1.09e-41 | 145 |
MsG0880044046.01.T01 | MTR_2g021920 | 40.426 | 235 | 110 | 10 | 111 | 318 | 37 | 268 | 2.87e-41 | 145 |
MsG0880044046.01.T01 | MTR_5g072060 | 35.220 | 318 | 173 | 10 | 1 | 299 | 45 | 348 | 3.68e-41 | 151 |
MsG0880044046.01.T01 | MTR_5g076490 | 36.517 | 356 | 161 | 15 | 1 | 318 | 3 | 331 | 4.72e-40 | 143 |
MsG0880044046.01.T01 | MTR_6g087620 | 33.219 | 292 | 140 | 9 | 33 | 298 | 1 | 263 | 1.29e-38 | 138 |
MsG0880044046.01.T01 | MTR_7g023800 | 35.455 | 330 | 169 | 13 | 1 | 314 | 1 | 302 | 2.19e-38 | 138 |
MsG0880044046.01.T01 | MTR_6g004450 | 40.889 | 225 | 107 | 8 | 111 | 318 | 49 | 264 | 6.84e-38 | 136 |
MsG0880044046.01.T01 | MTR_8g064790 | 33.030 | 330 | 158 | 13 | 1 | 318 | 54 | 332 | 1.17e-37 | 137 |
MsG0880044046.01.T01 | MTR_8g063350 | 33.553 | 304 | 171 | 13 | 31 | 313 | 43 | 336 | 1.87e-37 | 137 |
MsG0880044046.01.T01 | MTR_5g092860 | 32.353 | 340 | 156 | 12 | 1 | 298 | 41 | 348 | 5.60e-37 | 136 |
MsG0880044046.01.T01 | MTR_8g063370 | 32.738 | 336 | 189 | 19 | 1 | 314 | 63 | 383 | 1.01e-35 | 133 |
MsG0880044046.01.T01 | MTR_5g097850 | 34.875 | 281 | 124 | 8 | 55 | 318 | 2 | 240 | 1.88e-35 | 129 |
MsG0880044046.01.T01 | MTR_5g023970 | 41.398 | 186 | 98 | 6 | 141 | 318 | 9 | 191 | 5.18e-34 | 124 |
MsG0880044046.01.T01 | MTR_8g063330 | 35.350 | 314 | 149 | 16 | 1 | 278 | 53 | 348 | 1.95e-33 | 128 |
MsG0880044046.01.T01 | MTR_3g018750 | 34.440 | 241 | 124 | 7 | 111 | 321 | 3 | 239 | 2.33e-33 | 123 |
MsG0880044046.01.T01 | MTR_1g050308 | 31.385 | 325 | 161 | 10 | 1 | 318 | 73 | 342 | 4.90e-33 | 125 |
MsG0880044046.01.T01 | MTR_5g096900 | 37.729 | 273 | 132 | 15 | 1 | 245 | 51 | 313 | 8.37e-33 | 124 |
MsG0880044046.01.T01 | MTR_2g104260 | 34.914 | 232 | 115 | 7 | 2 | 201 | 50 | 277 | 3.50e-31 | 118 |
MsG0880044046.01.T01 | MTR_8g063310 | 28.402 | 338 | 210 | 12 | 2 | 314 | 58 | 388 | 3.79e-31 | 121 |
MsG0880044046.01.T01 | MTR_4g016000 | 39.024 | 205 | 96 | 9 | 88 | 276 | 2 | 193 | 1.01e-29 | 113 |
MsG0880044046.01.T01 | MTR_6g090260 | 38.220 | 191 | 103 | 5 | 141 | 319 | 73 | 260 | 7.88e-29 | 112 |
MsG0880044046.01.T01 | MTR_5g098950 | 32.281 | 285 | 132 | 9 | 9 | 281 | 39 | 274 | 1.05e-26 | 106 |
MsG0880044046.01.T01 | MTR_4g014370 | 37.433 | 187 | 104 | 6 | 140 | 318 | 151 | 332 | 2.52e-25 | 104 |
MsG0880044046.01.T01 | MTR_5g096920 | 37.662 | 154 | 88 | 3 | 174 | 322 | 1 | 151 | 2.56e-25 | 99.8 |
MsG0880044046.01.T01 | MTR_5g097540 | 31.488 | 289 | 132 | 11 | 1 | 281 | 3 | 233 | 1.63e-24 | 101 |
MsG0880044046.01.T01 | MTR_6g009350 | 38.220 | 191 | 98 | 8 | 111 | 285 | 8 | 194 | 1.89e-24 | 98.6 |
MsG0880044046.01.T01 | MTR_5g097820 | 36.869 | 198 | 101 | 9 | 1 | 180 | 62 | 253 | 4.35e-24 | 99.4 |
MsG0880044046.01.T01 | MTR_5g097660 | 42.342 | 111 | 64 | 0 | 212 | 322 | 9 | 119 | 1.10e-23 | 94.4 |
MsG0880044046.01.T01 | MTR_6g070880 | 35.567 | 194 | 77 | 9 | 1 | 157 | 71 | 253 | 1.64e-22 | 95.1 |
MsG0880044046.01.T01 | MTR_6g071420 | 35.567 | 194 | 77 | 9 | 1 | 157 | 71 | 253 | 1.64e-22 | 95.1 |
MsG0880044046.01.T01 | MTR_7g019250 | 35.610 | 205 | 102 | 7 | 111 | 300 | 224 | 413 | 2.16e-22 | 97.4 |
MsG0880044046.01.T01 | MTR_3g030620 | 36.782 | 174 | 91 | 7 | 161 | 317 | 5 | 176 | 2.62e-22 | 92.4 |
MsG0880044046.01.T01 | MTR_7g104710 | 33.829 | 269 | 118 | 15 | 1 | 241 | 56 | 292 | 6.77e-22 | 94.4 |
MsG0880044046.01.T01 | MTR_7g101200 | 34.634 | 205 | 105 | 8 | 85 | 278 | 40 | 226 | 2.06e-20 | 88.6 |
MsG0880044046.01.T01 | MTR_5g066420 | 36.667 | 150 | 83 | 4 | 174 | 312 | 1 | 149 | 2.14e-20 | 86.3 |
MsG0880044046.01.T01 | MTR_5g037190 | 31.696 | 224 | 98 | 9 | 1 | 196 | 55 | 251 | 3.40e-20 | 88.6 |
MsG0880044046.01.T01 | MTR_1g076810 | 36.979 | 192 | 93 | 11 | 1 | 174 | 57 | 238 | 1.09e-19 | 90.1 |
MsG0880044046.01.T01 | MTR_5g036250 | 52.273 | 88 | 40 | 2 | 233 | 320 | 23 | 108 | 3.17e-19 | 84.3 |
MsG0880044046.01.T01 | MTR_1g097330 | 27.273 | 253 | 162 | 8 | 66 | 304 | 107 | 351 | 1.67e-18 | 85.9 |
MsG0880044046.01.T01 | MTR_5g094350 | 33.750 | 160 | 69 | 5 | 80 | 206 | 117 | 272 | 2.57e-18 | 83.6 |
MsG0880044046.01.T01 | MTR_2g031720 | 27.556 | 225 | 138 | 11 | 52 | 257 | 81 | 299 | 6.02e-18 | 84.3 |
MsG0880044046.01.T01 | MTR_4g070550 | 27.604 | 192 | 118 | 6 | 85 | 257 | 126 | 315 | 1.17e-17 | 83.2 |
MsG0880044046.01.T01 | MTR_8g073570 | 40.602 | 133 | 57 | 7 | 1 | 122 | 49 | 170 | 1.19e-17 | 79.3 |
MsG0880044046.01.T01 | MTR_6g021880 | 29.545 | 264 | 157 | 8 | 31 | 282 | 90 | 336 | 1.57e-17 | 82.8 |
MsG0880044046.01.T01 | MTR_4g117720 | 27.957 | 279 | 174 | 10 | 64 | 323 | 104 | 374 | 1.76e-17 | 82.8 |
MsG0880044046.01.T01 | MTR_6g079730 | 38.235 | 136 | 76 | 4 | 189 | 319 | 14 | 146 | 1.84e-17 | 78.6 |
MsG0880044046.01.T01 | MTR_5g091150 | 35.377 | 212 | 84 | 11 | 45 | 230 | 2 | 186 | 1.84e-17 | 79.7 |
MsG0880044046.01.T01 | MTR_5g049560 | 40.816 | 147 | 64 | 7 | 1 | 126 | 3 | 147 | 3.01e-17 | 80.5 |
MsG0880044046.01.T01 | MTR_8g062660 | 27.715 | 267 | 139 | 10 | 19 | 257 | 75 | 315 | 3.44e-17 | 82.8 |
MsG0880044046.01.T01 | MTR_2g028140 | 27.604 | 192 | 118 | 6 | 85 | 257 | 132 | 321 | 2.83e-16 | 79.3 |
MsG0880044046.01.T01 | MTR_3g024110 | 31.132 | 212 | 119 | 9 | 52 | 257 | 187 | 377 | 1.32e-15 | 77.4 |
MsG0880044046.01.T01 | MTR_4g055060 | 32.039 | 206 | 113 | 9 | 70 | 258 | 127 | 322 | 1.64e-15 | 77.0 |
MsG0880044046.01.T01 | MTR_0667s0010 | 26.556 | 241 | 144 | 9 | 45 | 257 | 71 | 306 | 1.78e-15 | 77.0 |
MsG0880044046.01.T01 | MTR_7g017150 | 39.683 | 126 | 67 | 5 | 139 | 257 | 78 | 201 | 2.07e-15 | 75.5 |
MsG0880044046.01.T01 | MTR_8g101580 | 27.041 | 196 | 128 | 6 | 71 | 257 | 141 | 330 | 2.26e-15 | 76.6 |
MsG0880044046.01.T01 | MTR_1g068835 | 26.009 | 223 | 140 | 7 | 52 | 258 | 79 | 292 | 3.57e-15 | 75.9 |
MsG0880044046.01.T01 | MTR_5g086780 | 31.651 | 218 | 83 | 8 | 85 | 295 | 66 | 224 | 5.85e-15 | 73.6 |
MsG0880044046.01.T01 | MTR_2g022020 | 39.216 | 102 | 59 | 2 | 218 | 319 | 18 | 116 | 6.22e-15 | 70.5 |
MsG0880044046.01.T01 | MTR_7g017120 | 38.889 | 126 | 68 | 5 | 139 | 257 | 77 | 200 | 8.52e-15 | 73.6 |
MsG0880044046.01.T01 | MTR_3g083010 | 27.749 | 191 | 118 | 7 | 85 | 257 | 133 | 321 | 1.49e-14 | 74.3 |
MsG0880044046.01.T01 | MTR_5g096050 | 48.649 | 74 | 35 | 1 | 189 | 259 | 30 | 103 | 2.66e-14 | 68.9 |
MsG0880044046.01.T01 | MTR_7g407070 | 29.902 | 204 | 126 | 6 | 70 | 257 | 135 | 337 | 4.01e-14 | 72.8 |
MsG0880044046.01.T01 | MTR_2g031640 | 26.442 | 208 | 129 | 9 | 70 | 257 | 92 | 295 | 9.61e-14 | 71.6 |
MsG0880044046.01.T01 | MTR_2g031680 | 25.188 | 266 | 168 | 9 | 57 | 299 | 82 | 339 | 9.77e-14 | 71.6 |
MsG0880044046.01.T01 | MTR_3g024040 | 28.346 | 254 | 145 | 14 | 51 | 294 | 112 | 338 | 9.82e-14 | 71.6 |
MsG0880044046.01.T01 | MTR_3g030320 | 24.904 | 261 | 166 | 11 | 30 | 282 | 11 | 249 | 1.15e-13 | 70.9 |
MsG0880044046.01.T01 | MTR_6g065980 | 25.322 | 233 | 152 | 8 | 70 | 298 | 110 | 324 | 1.29e-13 | 71.2 |
MsG0880044046.01.T01 | MTR_1g115205 | 33.728 | 169 | 70 | 6 | 36 | 181 | 87 | 236 | 1.42e-13 | 69.7 |
MsG0880044046.01.T01 | MTR_7g070830 | 24.684 | 316 | 164 | 12 | 69 | 319 | 115 | 421 | 1.67e-13 | 71.2 |
MsG0880044046.01.T01 | MTR_3g009310 | 28.856 | 201 | 118 | 10 | 70 | 258 | 140 | 327 | 2.14e-13 | 70.9 |
MsG0880044046.01.T01 | MTR_2g426090 | 27.128 | 188 | 120 | 5 | 85 | 257 | 125 | 310 | 2.37e-13 | 70.5 |
MsG0880044046.01.T01 | MTR_1g068860 | 27.488 | 211 | 124 | 7 | 70 | 258 | 91 | 294 | 4.79e-13 | 69.7 |
MsG0880044046.01.T01 | MTR_1g112010 | 25.448 | 279 | 148 | 10 | 69 | 318 | 77 | 324 | 5.20e-13 | 68.9 |
MsG0880044046.01.T01 | MTR_1g097560 | 29.577 | 213 | 125 | 9 | 50 | 257 | 118 | 310 | 5.43e-13 | 69.3 |
MsG0880044046.01.T01 | MTR_3g006670 | 32.500 | 200 | 114 | 9 | 70 | 257 | 146 | 336 | 5.62e-13 | 69.7 |
MsG0880044046.01.T01 | MTR_2g055970 | 29.353 | 201 | 128 | 7 | 64 | 257 | 303 | 496 | 5.96e-13 | 69.7 |
MsG0880044046.01.T01 | MTR_3g036290 | 30.806 | 211 | 109 | 12 | 58 | 258 | 111 | 294 | 6.71e-13 | 68.9 |
MsG0880044046.01.T01 | MTR_3g024130 | 27.723 | 202 | 123 | 9 | 70 | 258 | 60 | 251 | 6.95e-13 | 68.6 |
MsG0880044046.01.T01 | MTR_5g097210 | 23.574 | 263 | 186 | 7 | 70 | 323 | 104 | 360 | 7.88e-13 | 68.9 |
MsG0880044046.01.T01 | MTR_4g116330 | 25.095 | 263 | 180 | 7 | 68 | 320 | 119 | 374 | 8.53e-13 | 68.9 |
MsG0880044046.01.T01 | MTR_4g031770 | 27.941 | 204 | 125 | 8 | 62 | 254 | 94 | 286 | 1.17e-12 | 68.6 |
MsG0880044046.01.T01 | MTR_4g023070 | 26.531 | 196 | 132 | 5 | 70 | 257 | 98 | 289 | 1.27e-12 | 68.2 |
MsG0880044046.01.T01 | MTR_3g024150 | 26.255 | 259 | 159 | 12 | 9 | 257 | 80 | 316 | 1.45e-12 | 68.2 |
MsG0880044046.01.T01 | MTR_4g023120 | 26.131 | 199 | 135 | 5 | 70 | 260 | 98 | 292 | 2.08e-12 | 67.8 |
MsG0880044046.01.T01 | MTR_1g050542 | 26.016 | 246 | 157 | 8 | 66 | 296 | 146 | 381 | 3.05e-12 | 67.4 |
MsG0880044046.01.T01 | MTR_2g426020 | 27.273 | 209 | 123 | 9 | 70 | 257 | 107 | 307 | 3.87e-12 | 67.0 |
MsG0880044046.01.T01 | MTR_3g011060 | 30.045 | 223 | 127 | 11 | 53 | 260 | 118 | 326 | 4.62e-12 | 66.6 |
MsG0880044046.01.T01 | MTR_4g023130 | 27.551 | 196 | 122 | 5 | 70 | 258 | 63 | 245 | 7.66e-12 | 65.5 |
MsG0880044046.01.T01 | MTR_4g061340 | 25.359 | 209 | 125 | 10 | 70 | 258 | 119 | 316 | 8.08e-12 | 65.9 |
MsG0880044046.01.T01 | MTR_3g007360 | 29.864 | 221 | 113 | 11 | 70 | 262 | 145 | 351 | 8.17e-12 | 65.9 |
MsG0880044046.01.T01 | MTR_1g009110 | 26.636 | 214 | 133 | 9 | 64 | 264 | 120 | 322 | 8.19e-12 | 65.9 |
MsG0880044046.01.T01 | MTR_4g118380 | 29.048 | 210 | 125 | 7 | 65 | 256 | 109 | 312 | 9.54e-12 | 65.5 |
MsG0880044046.01.T01 | MTR_4g023090 | 27.638 | 199 | 127 | 5 | 70 | 258 | 112 | 303 | 1.01e-11 | 65.5 |
MsG0880044046.01.T01 | MTR_3g007410 | 29.864 | 221 | 113 | 11 | 70 | 262 | 145 | 351 | 1.07e-11 | 65.5 |
MsG0880044046.01.T01 | MTR_6g060650 | 26.766 | 269 | 180 | 9 | 65 | 322 | 107 | 369 | 1.46e-11 | 65.1 |
MsG0880044046.01.T01 | MTR_2g025960 | 26.667 | 195 | 110 | 7 | 86 | 257 | 31 | 215 | 1.56e-11 | 64.7 |
MsG0880044046.01.T01 | MTR_1g037540 | 28.780 | 205 | 118 | 8 | 73 | 255 | 131 | 329 | 1.63e-11 | 65.1 |
MsG0880044046.01.T01 | MTR_3g010590 | 27.692 | 195 | 121 | 7 | 65 | 257 | 134 | 310 | 1.91e-11 | 64.7 |
MsG0880044046.01.T01 | MTR_4g118400 | 25.094 | 267 | 156 | 10 | 64 | 320 | 62 | 294 | 2.34e-11 | 63.9 |
MsG0880044046.01.T01 | MTR_1g068875 | 25.267 | 281 | 173 | 13 | 70 | 323 | 91 | 361 | 2.49e-11 | 64.3 |
MsG0880044046.01.T01 | MTR_1g055375 | 24.265 | 272 | 169 | 11 | 70 | 317 | 107 | 365 | 2.66e-11 | 64.3 |
MsG0880044046.01.T01 | MTR_2g425980 | 27.064 | 218 | 126 | 10 | 70 | 257 | 98 | 312 | 3.33e-11 | 64.3 |
MsG0880044046.01.T01 | MTR_1g050305 | 46.341 | 82 | 38 | 4 | 225 | 301 | 23 | 103 | 4.30e-11 | 60.5 |
MsG0880044046.01.T01 | MTR_7g070880 | 23.101 | 316 | 169 | 11 | 69 | 319 | 115 | 421 | 4.45e-11 | 63.9 |
MsG0880044046.01.T01 | MTR_3g006570 | 29.902 | 204 | 115 | 13 | 71 | 260 | 118 | 307 | 4.53e-11 | 63.5 |
MsG0880044046.01.T01 | MTR_1g056710 | 26.768 | 198 | 123 | 8 | 70 | 254 | 127 | 315 | 4.60e-11 | 63.5 |
MsG0880044046.01.T01 | MTR_2g426060 | 26.289 | 194 | 117 | 8 | 85 | 257 | 124 | 312 | 4.64e-11 | 63.5 |
MsG0880044046.01.T01 | MTR_2g078900 | 28.365 | 208 | 114 | 11 | 67 | 260 | 129 | 315 | 4.88e-11 | 63.5 |
MsG0880044046.01.T01 | MTR_3g036335 | 28.261 | 230 | 136 | 11 | 67 | 285 | 139 | 350 | 6.27e-11 | 63.2 |
MsG0880044046.01.T01 | MTR_4g117850 | 28.141 | 199 | 124 | 7 | 71 | 257 | 117 | 308 | 6.67e-11 | 63.2 |
MsG0880044046.01.T01 | MTR_5g007610 | 26.639 | 244 | 149 | 9 | 65 | 288 | 132 | 365 | 7.37e-11 | 63.2 |
MsG0880044046.01.T01 | MTR_8g090195 | 50.877 | 57 | 27 | 1 | 240 | 296 | 57 | 112 | 7.62e-11 | 58.9 |
MsG0880044046.01.T01 | MTR_1g054575 | 27.404 | 208 | 116 | 9 | 66 | 257 | 143 | 331 | 9.72e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044046.01.T01 | AT3G06240 | 30.542 | 203 | 119 | 9 | 66 | 256 | 165 | 357 | 1.23e-18 | 86.3 |
MsG0880044046.01.T01 | AT3G17530 | 26.235 | 324 | 205 | 16 | 1 | 305 | 36 | 344 | 4.89e-11 | 63.5 |
Find 72 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGTCTCTTTCCATTCTTTC+TGG | 0.036015 | 8:-34747282 | MsG0880044046.01.T01:CDS |
CAACTTGCCTTCAAATTCTA+TGG | 0.189870 | 8:+34746981 | None:intergenic |
CTGGTGAAAGGTTTGAAATT+AGG | 0.205647 | 8:-34747263 | MsG0880044046.01.T01:CDS |
TTGGGTTCTGCTAGTGTTAA+TGG | 0.224582 | 8:-34747174 | MsG0880044046.01.T01:CDS |
TGGTGAAAGGTTTGAAATTA+GGG | 0.276112 | 8:-34747262 | MsG0880044046.01.T01:CDS |
CGCTGAAATTATTCATTCCT+TGG | 0.276772 | 8:+34746415 | None:intergenic |
ACAAGAACTGTATATTCTTC+AGG | 0.284251 | 8:-34746558 | MsG0880044046.01.T01:CDS |
CTTCAATTCTTTCAACCCTT+TGG | 0.298576 | 8:+34746497 | None:intergenic |
AGGCTATATATCTCCCAAAA+AGG | 0.325936 | 8:+34746952 | None:intergenic |
TTCAATTCTTTCAACCCTTT+GGG | 0.339075 | 8:+34746498 | None:intergenic |
TTCTTACACAGGTACGTATA+TGG | 0.342636 | 8:-34746881 | MsG0880044046.01.T01:CDS |
TACGCACATGACAATCTATA+AGG | 0.382608 | 8:-34746455 | MsG0880044046.01.T01:CDS |
ATAGCCTCAAAAGTGATTCT+TGG | 0.384343 | 8:-34746936 | MsG0880044046.01.T01:CDS |
CTCAGCGTCGTCATGGTGTT+TGG | 0.385310 | 8:+34747347 | None:intergenic |
GATTCTTGGAGGAAACTTGA+TGG | 0.387669 | 8:-34746922 | MsG0880044046.01.T01:CDS |
GTGTTTGGAAATGAGGAAAT+TGG | 0.389210 | 8:+34747362 | None:intergenic |
ATCTTGAATTCTGAGGTTGC+AGG | 0.392892 | 8:+34747108 | None:intergenic |
AAACCTTTCACCAGAAAGAA+TGG | 0.398863 | 8:+34747272 | None:intergenic |
TTTCCATTCTTTCTGGTGAA+AGG | 0.407472 | 8:-34747275 | MsG0880044046.01.T01:CDS |
CAGACAATCGAACAATTATA+AGG | 0.410512 | 8:+34746598 | None:intergenic |
TGAGATCCGTCTCCTCATAT+TGG | 0.417946 | 8:-34747328 | MsG0880044046.01.T01:CDS |
GCGTTGGCATCTTGTTGAAA+TGG | 0.419063 | 8:+34747219 | None:intergenic |
TTCTTGTTCCCTACTGAGAT+AGG | 0.424317 | 8:+34746574 | None:intergenic |
ATTGTACATGTTTGCCTTGG+TGG | 0.429506 | 8:-34746737 | MsG0880044046.01.T01:CDS |
TTTGGGTGAAGTGGGTATCA+AGG | 0.430074 | 8:-34746650 | MsG0880044046.01.T01:CDS |
TGGACCAAGCTCTTTGTTGT+CGG | 0.431185 | 8:-34746622 | MsG0880044046.01.T01:CDS |
AAGAGTTAACGACTGTGTTA+TGG | 0.432122 | 8:-34747134 | MsG0880044046.01.T01:CDS |
GGACCAAGCTCTTTGTTGTC+GGG | 0.441247 | 8:-34746621 | MsG0880044046.01.T01:CDS |
CCCTTTGGGTACTTAAATCA+AGG | 0.444275 | 8:+34746512 | None:intergenic |
TATATCATTATCATGTAAAT+CGG | 0.450249 | 8:+34746828 | None:intergenic |
CTCCTCATATTGGAACGGTC+AGG | 0.450673 | 8:-34747318 | MsG0880044046.01.T01:CDS |
AAAACCCAGATATGAAAATC+AGG | 0.463246 | 8:+34746670 | None:intergenic |
AATTATTCATTCCTTGGAAA+AGG | 0.466035 | 8:+34746421 | None:intergenic |
GTTGAAAGAATTGAAGTTCA+AGG | 0.466298 | 8:-34746490 | MsG0880044046.01.T01:CDS |
ACGTATATGGTGAACTTGAA+TGG | 0.468245 | 8:-34746868 | MsG0880044046.01.T01:CDS |
ACCCTGACCGTTCCAATATG+AGG | 0.486298 | 8:+34747316 | None:intergenic |
AGATATCCCATAGAATTTGA+AGG | 0.491083 | 8:-34746988 | MsG0880044046.01.T01:CDS |
CAAGAACTGTATATTCTTCA+GGG | 0.491309 | 8:-34746557 | MsG0880044046.01.T01:CDS |
AAAACAAGCTTCCTCCTCAT+GGG | 0.505237 | 8:-34747059 | MsG0880044046.01.T01:CDS |
CATTCCTCCTAGCATTCAAC+CGG | 0.506002 | 8:-34747085 | MsG0880044046.01.T01:CDS |
CGTCATGGTGTTTGGAAATG+AGG | 0.509391 | 8:+34747355 | None:intergenic |
TCCTCATATTGGAACGGTCA+GGG | 0.509543 | 8:-34747317 | MsG0880044046.01.T01:CDS |
GCCTCAAAAGTGATTCTTGG+AGG | 0.511423 | 8:-34746933 | MsG0880044046.01.T01:CDS |
ATTGTCTGTCCTATCTCAGT+AGG | 0.515259 | 8:-34746583 | MsG0880044046.01.T01:CDS |
GAAAACAAGCTTCCTCCTCA+TGG | 0.520217 | 8:-34747060 | MsG0880044046.01.T01:CDS |
AACTTGCCTTCAAATTCTAT+GGG | 0.520258 | 8:+34746982 | None:intergenic |
AAGCTTCCTCCTCATGGGGT+TGG | 0.527698 | 8:-34747054 | MsG0880044046.01.T01:CDS |
CCTTGATTTAAGTACCCAAA+GGG | 0.528859 | 8:-34746512 | MsG0880044046.01.T01:CDS |
AAGTGGGTATCAAGGAATCA+TGG | 0.534537 | 8:-34746642 | MsG0880044046.01.T01:CDS |
GCATCTTGTTGAAATGGAAG+TGG | 0.548325 | 8:+34747225 | None:intergenic |
CTGTCATCTATAATTACGAC+AGG | 0.552750 | 8:-34746696 | MsG0880044046.01.T01:CDS |
TCTTGAATTCTGAGGTTGCA+GGG | 0.561206 | 8:+34747109 | None:intergenic |
TCCTCCTAGCATTCAACCGG+TGG | 0.568924 | 8:-34747082 | MsG0880044046.01.T01:CDS |
GCCTTGATTTAAGTACCCAA+AGG | 0.575527 | 8:-34746513 | MsG0880044046.01.T01:CDS |
AGGGAAGAAGATCTTGAGCT+AGG | 0.579938 | 8:-34746538 | MsG0880044046.01.T01:CDS |
ACCGTTCCAATATGAGGAGA+CGG | 0.581029 | 8:+34747322 | None:intergenic |
GACGGATCTCAGCGTCGTCA+TGG | 0.583564 | 8:+34747340 | None:intergenic |
AGGCCCGACAACAAAGAGCT+TGG | 0.584231 | 8:+34746618 | None:intergenic |
TAGATTGTACATGTTTGCCT+TGG | 0.590779 | 8:-34746740 | MsG0880044046.01.T01:CDS |
AATAGGAGGAGCATCGGCGT+TGG | 0.596479 | 8:+34747203 | None:intergenic |
AGGAATGATCTTGAATTCTG+AGG | 0.607605 | 8:+34747101 | None:intergenic |
GATATGCATGTTTCTTACAC+AGG | 0.608688 | 8:-34746892 | MsG0880044046.01.T01:CDS |
TTGTCTGTCCTATCTCAGTA+GGG | 0.612715 | 8:-34746582 | MsG0880044046.01.T01:CDS |
CATCTTGTTGAAATGGAAGT+GGG | 0.622859 | 8:+34747226 | None:intergenic |
TCCGTCTCCTCATATTGGAA+CGG | 0.628271 | 8:-34747323 | MsG0880044046.01.T01:CDS |
AAACAAGCTTCCTCCTCATG+GGG | 0.642807 | 8:-34747058 | MsG0880044046.01.T01:CDS |
CATGTAAATCGGTAAACCAG+TGG | 0.646942 | 8:+34746839 | None:intergenic |
TCATAACCAACCCCATGAGG+AGG | 0.662045 | 8:+34747048 | None:intergenic |
TCCACCGGTTGAATGCTAGG+AGG | 0.669850 | 8:+34747081 | None:intergenic |
CAGTCATAACCAACCCCATG+AGG | 0.688757 | 8:+34747045 | None:intergenic |
TGGAAATGAGGAAATTGGTG+CGG | 0.712809 | 8:+34747367 | None:intergenic |
AGACTCATTTAACTCCACCA+AGG | 0.716876 | 8:+34746723 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATCATTATCATGTAAAT+CGG | + | Chr8:34746970-34746989 | None:intergenic | 15.0% |
!! | CTGTGTTACAAATGATTTTA+AGG | - | Chr8:34746770-34746789 | MsG0880044046.01.T01:CDS | 25.0% |
!!! | CAAATGATTTTAAGGTGATT+CGG | - | Chr8:34746778-34746797 | MsG0880044046.01.T01:CDS | 25.0% |
AAAACCCAGATATGAAAATC+AGG | + | Chr8:34747128-34747147 | None:intergenic | 30.0% | |
AACTTGCCTTCAAATTCTAT+GGG | + | Chr8:34746816-34746835 | None:intergenic | 30.0% | |
ACAAGAACTGTATATTCTTC+AGG | - | Chr8:34747237-34747256 | MsG0880044046.01.T01:CDS | 30.0% | |
AGATATCCCATAGAATTTGA+AGG | - | Chr8:34746807-34746826 | MsG0880044046.01.T01:CDS | 30.0% | |
CAAGAACTGTATATTCTTCA+GGG | - | Chr8:34747238-34747257 | MsG0880044046.01.T01:CDS | 30.0% | |
CAGACAATCGAACAATTATA+AGG | + | Chr8:34747200-34747219 | None:intergenic | 30.0% | |
GAACCCAAAATAAAAATAGG+AGG | + | Chr8:34746609-34746628 | None:intergenic | 30.0% | |
GCAGAACCCAAAATAAAAAT+AGG | + | Chr8:34746612-34746631 | None:intergenic | 30.0% | |
GTTGAAAGAATTGAAGTTCA+AGG | - | Chr8:34747305-34747324 | MsG0880044046.01.T01:CDS | 30.0% | |
TTCAATTCTTTCAACCCTTT+GGG | + | Chr8:34747300-34747319 | None:intergenic | 30.0% | |
! | AAAATCTTCTTCCTTTTCCA+AGG | - | Chr8:34747363-34747382 | MsG0880044046.01.T01:CDS | 30.0% |
! | AATAAAAATAGGAGGAGCAT+CGG | + | Chr8:34746601-34746620 | None:intergenic | 30.0% |
! | CAAGTTGTATGAACCTTTTT+GGG | - | Chr8:34746830-34746849 | MsG0880044046.01.T01:CDS | 30.0% |
! | CTATGTTTTACATCTGAAGA+AGG | + | Chr8:34747038-34747057 | None:intergenic | 30.0% |
! | GATTTTCATATCTGGGTTTT+GGG | - | Chr8:34747128-34747147 | MsG0880044046.01.T01:CDS | 30.0% |
! | TGATTTTCATATCTGGGTTT+TGG | - | Chr8:34747127-34747146 | MsG0880044046.01.T01:CDS | 30.0% |
! | TGGTGAAAGGTTTGAAATTA+GGG | - | Chr8:34746533-34746552 | MsG0880044046.01.T01:CDS | 30.0% |
!!! | GCTCCTCCTATTTTTATTTT+GGG | - | Chr8:34746603-34746622 | MsG0880044046.01.T01:CDS | 30.0% |
!!! | TGCTCCTCCTATTTTTATTT+TGG | - | Chr8:34746602-34746621 | MsG0880044046.01.T01:CDS | 30.0% |
AAACCTTTCACCAGAAAGAA+TGG | + | Chr8:34746526-34746545 | None:intergenic | 35.0% | |
AAGAGTTAACGACTGTGTTA+TGG | - | Chr8:34746661-34746680 | MsG0880044046.01.T01:CDS | 35.0% | |
ACGTATATGGTGAACTTGAA+TGG | - | Chr8:34746927-34746946 | MsG0880044046.01.T01:CDS | 35.0% | |
AGGAATGATCTTGAATTCTG+AGG | + | Chr8:34746697-34746716 | None:intergenic | 35.0% | |
AGGCTATATATCTCCCAAAA+AGG | + | Chr8:34746846-34746865 | None:intergenic | 35.0% | |
ATAGCCTCAAAAGTGATTCT+TGG | - | Chr8:34746859-34746878 | MsG0880044046.01.T01:CDS | 35.0% | |
CAACTTGCCTTCAAATTCTA+TGG | + | Chr8:34746817-34746836 | None:intergenic | 35.0% | |
CATCTTGTTGAAATGGAAGT+GGG | + | Chr8:34746572-34746591 | None:intergenic | 35.0% | |
CCTTGATTTAAGTACCCAAA+GGG | - | Chr8:34747283-34747302 | MsG0880044046.01.T01:CDS | 35.0% | |
CTGTCATCTATAATTACGAC+AGG | - | Chr8:34747099-34747118 | MsG0880044046.01.T01:CDS | 35.0% | |
CTTCAATTCTTTCAACCCTT+TGG | + | Chr8:34747301-34747320 | None:intergenic | 35.0% | |
GATATGCATGTTTCTTACAC+AGG | - | Chr8:34746903-34746922 | MsG0880044046.01.T01:CDS | 35.0% | |
GTGTTTGGAAATGAGGAAAT+TGG | + | Chr8:34746436-34746455 | None:intergenic | 35.0% | |
TACGCACATGACAATCTATA+AGG | - | Chr8:34747340-34747359 | MsG0880044046.01.T01:CDS | 35.0% | |
TAGATTGTACATGTTTGCCT+TGG | - | Chr8:34747055-34747074 | MsG0880044046.01.T01:CDS | 35.0% | |
TTCTTACACAGGTACGTATA+TGG | - | Chr8:34746914-34746933 | MsG0880044046.01.T01:CDS | 35.0% | |
! | CTGGTGAAAGGTTTGAAATT+AGG | - | Chr8:34746532-34746551 | MsG0880044046.01.T01:CDS | 35.0% |
! | GCAAGTTGTATGAACCTTTT+TGG | - | Chr8:34746829-34746848 | MsG0880044046.01.T01:CDS | 35.0% |
! | TTTCCATTCTTTCTGGTGAA+AGG | - | Chr8:34746520-34746539 | MsG0880044046.01.T01:CDS | 35.0% |
! | TTTTACATCTGAAGAAGGCA+AGG | + | Chr8:34747033-34747052 | None:intergenic | 35.0% |
AAAACAAGCTTCCTCCTCAT+GGG | - | Chr8:34746736-34746755 | MsG0880044046.01.T01:CDS | 40.0% | |
AAGTGGGTATCAAGGAATCA+TGG | - | Chr8:34747153-34747172 | MsG0880044046.01.T01:CDS | 40.0% | |
AGACTCATTTAACTCCACCA+AGG | + | Chr8:34747075-34747094 | None:intergenic | 40.0% | |
ATTGTACATGTTTGCCTTGG+TGG | - | Chr8:34747058-34747077 | MsG0880044046.01.T01:CDS | 40.0% | |
ATTGTCTGTCCTATCTCAGT+AGG | - | Chr8:34747212-34747231 | MsG0880044046.01.T01:CDS | 40.0% | |
CAGTCTCTTTCCATTCTTTC+TGG | - | Chr8:34746513-34746532 | MsG0880044046.01.T01:CDS | 40.0% | |
CATGTAAATCGGTAAACCAG+TGG | + | Chr8:34746959-34746978 | None:intergenic | 40.0% | |
CCCTTTGGGTACTTAAATCA+AGG | + | Chr8:34747286-34747305 | None:intergenic | 40.0% | |
GATTCTTGGAGGAAACTTGA+TGG | - | Chr8:34746873-34746892 | MsG0880044046.01.T01:CDS | 40.0% | |
GCATCTTGTTGAAATGGAAG+TGG | + | Chr8:34746573-34746592 | None:intergenic | 40.0% | |
GCCTTGATTTAAGTACCCAA+AGG | - | Chr8:34747282-34747301 | MsG0880044046.01.T01:CDS | 40.0% | |
TGGAAATGAGGAAATTGGTG+CGG | + | Chr8:34746431-34746450 | None:intergenic | 40.0% | |
TTCTTGTTCCCTACTGAGAT+AGG | + | Chr8:34747224-34747243 | None:intergenic | 40.0% | |
TTGGGTTCTGCTAGTGTTAA+TGG | - | Chr8:34746621-34746640 | MsG0880044046.01.T01:CDS | 40.0% | |
TTGTCTGTCCTATCTCAGTA+GGG | - | Chr8:34747213-34747232 | MsG0880044046.01.T01:CDS | 40.0% | |
! | GACGCCTGATTTTCATATCT+GGG | - | Chr8:34747121-34747140 | MsG0880044046.01.T01:CDS | 40.0% |
!! | ACTTGAATGGATTTTGCCAC+TGG | - | Chr8:34746940-34746959 | MsG0880044046.01.T01:CDS | 40.0% |
!! | ATCTTGAATTCTGAGGTTGC+AGG | + | Chr8:34746690-34746709 | None:intergenic | 40.0% |
!! | TCCTCCAAGAATCACTTTTG+AGG | + | Chr8:34746866-34746885 | None:intergenic | 40.0% |
!! | TCTTGAATTCTGAGGTTGCA+GGG | + | Chr8:34746689-34746708 | None:intergenic | 40.0% |
AAACAAGCTTCCTCCTCATG+GGG | - | Chr8:34746737-34746756 | MsG0880044046.01.T01:CDS | 45.0% | |
ACCGTTCCAATATGAGGAGA+CGG | + | Chr8:34746476-34746495 | None:intergenic | 45.0% | |
AGGGAAGAAGATCTTGAGCT+AGG | - | Chr8:34747257-34747276 | MsG0880044046.01.T01:CDS | 45.0% | |
CATTCCTCCTAGCATTCAAC+CGG | - | Chr8:34746710-34746729 | MsG0880044046.01.T01:CDS | 45.0% | |
CGTCATGGTGTTTGGAAATG+AGG | + | Chr8:34746443-34746462 | None:intergenic | 45.0% | |
GAAAACAAGCTTCCTCCTCA+TGG | - | Chr8:34746735-34746754 | MsG0880044046.01.T01:CDS | 45.0% | |
GCCTCAAAAGTGATTCTTGG+AGG | - | Chr8:34746862-34746881 | MsG0880044046.01.T01:CDS | 45.0% | |
TCCGTCTCCTCATATTGGAA+CGG | - | Chr8:34746472-34746491 | MsG0880044046.01.T01:CDS | 45.0% | |
TCCTCATATTGGAACGGTCA+GGG | - | Chr8:34746478-34746497 | MsG0880044046.01.T01:CDS | 45.0% | |
TGAGATCCGTCTCCTCATAT+TGG | - | Chr8:34746467-34746486 | MsG0880044046.01.T01:CDS | 45.0% | |
TTTGGGTGAAGTGGGTATCA+AGG | - | Chr8:34747145-34747164 | MsG0880044046.01.T01:CDS | 45.0% | |
! | GCGTTGGCATCTTGTTGAAA+TGG | + | Chr8:34746579-34746598 | None:intergenic | 45.0% |
! | GGACGCCTGATTTTCATATC+TGG | - | Chr8:34747120-34747139 | MsG0880044046.01.T01:CDS | 45.0% |
! | TGGACCAAGCTCTTTGTTGT+CGG | - | Chr8:34747173-34747192 | MsG0880044046.01.T01:CDS | 45.0% |
!! | TTTTCCACCGGTTGAATGCT+AGG | + | Chr8:34746720-34746739 | None:intergenic | 45.0% |
!!! | ATCTGGGTTTTGGGTGAAGT+GGG | - | Chr8:34747137-34747156 | MsG0880044046.01.T01:CDS | 45.0% |
!!! | TATCTGGGTTTTGGGTGAAG+TGG | - | Chr8:34747136-34747155 | MsG0880044046.01.T01:CDS | 45.0% |
ACCCTGACCGTTCCAATATG+AGG | + | Chr8:34746482-34746501 | None:intergenic | 50.0% | |
CAGTCATAACCAACCCCATG+AGG | + | Chr8:34746753-34746772 | None:intergenic | 50.0% | |
CTCCTCATATTGGAACGGTC+AGG | - | Chr8:34746477-34746496 | MsG0880044046.01.T01:CDS | 50.0% | |
TCATAACCAACCCCATGAGG+AGG | + | Chr8:34746750-34746769 | None:intergenic | 50.0% | |
! | GGACCAAGCTCTTTGTTGTC+GGG | - | Chr8:34747174-34747193 | MsG0880044046.01.T01:CDS | 50.0% |
!! | GGAGGAAGCTTGTTTTCCAC+CGG | + | Chr8:34746732-34746751 | None:intergenic | 50.0% |
AAGCTTCCTCCTCATGGGGT+TGG | - | Chr8:34746741-34746760 | MsG0880044046.01.T01:CDS | 55.0% | |
AGGCCCGACAACAAAGAGCT+TGG | + | Chr8:34747180-34747199 | None:intergenic | 55.0% | |
CTCAGCGTCGTCATGGTGTT+TGG | + | Chr8:34746451-34746470 | None:intergenic | 55.0% | |
TCCTCCTAGCATTCAACCGG+TGG | - | Chr8:34746713-34746732 | MsG0880044046.01.T01:CDS | 55.0% | |
! | TCCACCGGTTGAATGCTAGG+AGG | + | Chr8:34746717-34746736 | None:intergenic | 55.0% |
!! | AATAGGAGGAGCATCGGCGT+TGG | + | Chr8:34746595-34746614 | None:intergenic | 55.0% |
GACGGATCTCAGCGTCGTCA+TGG | + | Chr8:34746458-34746477 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 34746423 | 34747394 | 34746423 | ID=MsG0880044046.01;Name=MsG0880044046.01 |
Chr8 | mRNA | 34746423 | 34747394 | 34746423 | ID=MsG0880044046.01.T01;Parent=MsG0880044046.01;Name=MsG0880044046.01.T01;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|323 |
Chr8 | exon | 34746423 | 34747394 | 34746423 | ID=MsG0880044046.01.T01:exon:20537;Parent=MsG0880044046.01.T01 |
Chr8 | CDS | 34746423 | 34747394 | 34746423 | ID=MsG0880044046.01.T01:cds;Parent=MsG0880044046.01.T01 |
Gene Sequence |
Protein sequence |