AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045092.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045092.01.T01 MTR_8g064890 79.950 399 65 7 1 394 1 389 0.0 595
MsG0880045092.01.T01 MTR_8g064790 76.263 396 34 5 1 394 1 338 0.0 558
MsG0880045092.01.T01 MTR_2g034700 51.026 390 161 10 3 386 4 369 1.85e-111 331
MsG0880045092.01.T01 MTR_3g011120 50.000 394 160 13 1 382 1 369 1.21e-106 319
MsG0880045092.01.T01 MTR_8g036970 52.304 369 112 9 19 380 2 313 3.49e-103 310
MsG0880045092.01.T01 MTR_8g467670 46.135 401 188 10 1 394 1 380 4.23e-102 308
MsG0880045092.01.T01 MTR_0129s0070 43.424 403 194 12 8 393 11 396 2.09e-96 294
MsG0880045092.01.T01 MTR_2g066170 44.335 406 191 13 1 392 1 385 1.61e-95 291
MsG0880045092.01.T01 MTR_2g066200 44.717 407 190 13 4 394 2 389 2.30e-93 285
MsG0880045092.01.T01 MTR_0129s0050 41.549 426 198 13 1 393 1 408 9.78e-92 282
MsG0880045092.01.T01 MTR_0129s0120 42.015 407 204 12 2 392 5 395 1.11e-90 279
MsG0880045092.01.T01 MTR_8g063440 42.643 401 202 12 4 394 2 384 3.39e-90 277
MsG0880045092.01.T01 MTR_2g021770 40.144 416 219 8 1 394 1 408 8.58e-88 272
MsG0880045092.01.T01 MTR_4g014370 41.429 420 197 13 8 393 5 409 3.08e-87 270
MsG0880045092.01.T01 MTR_8g039500 43.666 371 175 11 1 362 1 346 9.90e-87 267
MsG0880045092.01.T01 MTR_4g028680 41.951 410 206 13 4 394 5 401 1.66e-86 268
MsG0880045092.01.T01 MTR_6g086825 41.063 414 214 12 1 393 56 460 1.01e-85 268
MsG0880045092.01.T01 MTR_5g024260 46.000 400 165 17 1 371 7 384 1.30e-85 266
MsG0880045092.01.T01 MTR_2g066150 43.564 404 175 15 1 394 1 361 1.55e-85 264
MsG0880045092.01.T01 MTR_2g021800 40.471 425 210 14 2 394 4 417 1.85e-85 266
MsG0880045092.01.T01 MTR_4g028510 40.732 410 211 12 4 393 5 402 2.28e-85 267
MsG0880045092.01.T01 MTR_2g065860 41.050 419 192 14 1 394 1 389 3.03e-85 265
MsG0880045092.01.T01 MTR_2g022000 42.040 402 191 13 2 372 6 396 3.79e-85 266
MsG0880045092.01.T01 MTR_0831s0010 40.049 407 205 14 2 392 37 420 7.44e-85 265
MsG0880045092.01.T01 MTR_2g065840 42.105 418 186 17 1 392 1 388 2.37e-84 262
MsG0880045092.01.T01 MTR_2g021950 40.587 409 198 15 5 389 6 393 2.62e-84 262
MsG0880045092.01.T01 MTR_8g464770 40.779 385 203 11 9 386 7 373 1.90e-83 259
MsG0880045092.01.T01 MTR_5g097330 40.587 409 213 14 5 394 7 404 6.69e-83 259
MsG0880045092.01.T01 MTR_1g007450 41.162 396 200 12 1 378 1 381 7.03e-83 259
MsG0880045092.01.T01 MTR_0054s0090 40.441 408 202 14 13 394 15 407 7.45e-83 259
MsG0880045092.01.T01 MTR_4g028660 39.850 399 213 11 4 386 5 392 7.45e-83 259
MsG0880045092.01.T01 MTR_4g027450 39.850 399 213 11 4 386 5 392 7.45e-83 259
MsG0880045092.01.T01 MTR_0054s0100 39.655 406 210 12 13 394 15 409 3.06e-82 258
MsG0880045092.01.T01 MTR_5g097220 40.732 410 198 12 15 393 13 408 8.24e-82 256
MsG0880045092.01.T01 MTR_0134s0060 40.334 419 211 12 4 392 2 411 1.90e-81 256
MsG0880045092.01.T01 MTR_4g117550 39.394 396 197 13 8 393 11 373 4.78e-81 253
MsG0880045092.01.T01 MTR_6g079770 40.749 427 206 16 2 394 5 418 6.08e-81 254
MsG0880045092.01.T01 MTR_6g080680 39.259 405 204 13 2 386 6 388 1.77e-80 253
MsG0880045092.01.T01 MTR_1g098180 40.244 410 178 13 1 390 1 363 1.92e-80 251
MsG0880045092.01.T01 MTR_8g041270 38.353 425 211 16 1 393 1 406 1.37e-79 251
MsG0880045092.01.T01 MTR_2g104340 39.618 419 204 17 1 393 1 396 3.77e-79 249
MsG0880045092.01.T01 MTR_6g079810 38.995 418 212 14 6 391 55 461 3.91e-79 251
MsG0880045092.01.T01 MTR_5g097680 39.819 442 193 17 4 393 7 427 4.15e-79 250
MsG0880045092.01.T01 MTR_4g130330 40.686 408 198 15 11 393 3 391 1.82e-78 247
MsG0880045092.01.T01 MTR_5g096630 39.803 407 203 15 18 394 21 415 2.37e-76 243
MsG0880045092.01.T01 MTR_8g032980 39.503 443 198 16 1 394 1 422 2.84e-76 243
MsG0880045092.01.T01 MTR_2g038680 38.480 408 208 12 15 392 16 410 1.13e-75 241
MsG0880045092.01.T01 MTR_6g478230 37.736 424 198 14 5 394 17 408 9.59e-75 238
MsG0880045092.01.T01 MTR_6g090180 40.633 411 206 19 4 389 37 434 1.16e-74 239
MsG0880045092.01.T01 MTR_7g017040 41.397 401 201 12 13 394 14 399 1.79e-74 237
MsG0880045092.01.T01 MTR_7g069550 38.663 419 207 18 1 393 1 395 1.88e-74 237
MsG0880045092.01.T01 MTR_5g037680 38.614 404 192 13 11 386 4 379 2.41e-74 238
MsG0880045092.01.T01 MTR_7g017130 38.791 397 210 14 15 394 18 398 4.99e-74 236
MsG0880045092.01.T01 MTR_8g063370 38.718 390 207 15 3 384 18 383 7.27e-74 236
MsG0880045092.01.T01 MTR_4g055820 40.650 369 187 11 1 348 1 358 8.42e-74 234
MsG0880045092.01.T01 MTR_5g096910 38.293 410 215 17 1 392 3 392 6.52e-73 233
MsG0880045092.01.T01 MTR_2g104280 37.561 410 211 14 13 393 12 405 1.15e-72 233
MsG0880045092.01.T01 MTR_8g046310 38.060 402 206 15 1 388 1 373 1.22e-72 232
MsG0880045092.01.T01 MTR_5g069390 37.226 411 223 13 7 393 18 417 4.69e-72 234
MsG0880045092.01.T01 MTR_2g064950 39.120 409 185 19 8 384 4 380 9.58e-72 230
MsG0880045092.01.T01 MTR_8g012090 41.114 377 156 15 4 362 6 334 1.50e-71 228
MsG0880045092.01.T01 MTR_8g063310 37.560 418 214 16 3 394 12 408 1.69e-71 230
MsG0880045092.01.T01 MTR_8g046200 38.462 442 193 17 1 388 1 417 3.19e-71 229
MsG0880045092.01.T01 MTR_8g033140 37.813 439 203 17 2 394 5 419 6.63e-71 228
MsG0880045092.01.T01 MTR_5g097350 39.062 384 191 13 24 389 25 383 9.54e-71 227
MsG0880045092.01.T01 MTR_7g017170 37.653 409 210 15 15 394 18 410 1.15e-70 228
MsG0880045092.01.T01 MTR_4g028750 37.859 383 208 12 6 371 7 376 1.27e-70 227
MsG0880045092.01.T01 MTR_1g053510 37.678 422 208 14 1 388 1 401 1.57e-70 227
MsG0880045092.01.T01 MTR_4g102410 38.213 403 214 14 12 391 58 448 7.01e-70 227
MsG0880045092.01.T01 MTR_5g092850 36.765 408 210 14 10 389 11 398 2.33e-69 224
MsG0880045092.01.T01 MTR_5g074850 39.043 397 197 17 1 370 23 401 2.97e-69 235
MsG0880045092.01.T01 MTR_6g461660 39.750 400 206 15 13 393 17 400 1.37e-68 222
MsG0880045092.01.T01 MTR_8g046220 36.967 422 206 14 4 388 3 401 2.62e-68 221
MsG0880045092.01.T01 MTR_7g079640 38.235 374 184 13 14 371 12 354 7.82e-68 219
MsG0880045092.01.T01 MTR_1g007410 38.035 397 202 16 14 385 21 398 8.43e-68 220
MsG0880045092.01.T01 MTR_8g018110 36.627 415 210 13 8 393 7 397 1.70e-67 219
MsG0880045092.01.T01 MTR_4g007940 40.979 327 160 9 84 390 26 339 3.00e-67 217
MsG0880045092.01.T01 MTR_5g059430 36.321 424 214 15 7 391 18 424 4.73e-66 216
MsG0880045092.01.T01 MTR_8g063330 38.564 376 177 15 1 349 1 349 1.10e-65 216
MsG0880045092.01.T01 MTR_5g075370 37.879 396 198 16 13 375 6 386 2.35e-64 219
MsG0880045092.01.T01 MTR_8g033110 36.427 431 215 14 4 393 3 415 3.19e-64 211
MsG0880045092.01.T01 MTR_5g091140 39.364 409 185 17 4 384 38 411 4.19e-63 208
MsG0880045092.01.T01 MTR_8g033090 35.963 431 206 15 8 393 7 412 1.14e-62 207
MsG0880045092.01.T01 MTR_8g013000 40.000 360 181 12 13 351 8 353 2.64e-61 203
MsG0880045092.01.T01 MTR_5g022850 37.713 411 177 15 3 394 4 354 7.00e-61 201
MsG0880045092.01.T01 MTR_8g063350 36.683 398 170 15 9 387 8 342 1.26e-60 199
MsG0880045092.01.T01 MTR_5g043605 43.509 285 130 10 119 393 76 339 3.10e-59 197
MsG0880045092.01.T01 MTR_6g078010 36.760 321 161 12 85 388 35 330 3.45e-59 196
MsG0880045092.01.T01 MTR_5g068490 43.929 280 121 11 119 394 31 278 1.27e-58 192
MsG0880045092.01.T01 MTR_1g007430 39.368 348 172 14 19 351 1 324 4.52e-58 192
MsG0880045092.01.T01 MTR_5g072060 37.203 379 182 14 12 368 3 347 1.57e-57 198
MsG0880045092.01.T01 MTR_6g090250 33.489 427 225 13 8 388 6 419 6.48e-57 192
MsG0880045092.01.T01 MTR_7g111700 36.186 409 177 16 14 394 14 366 1.06e-56 190
MsG0880045092.01.T01 MTR_5g092860 37.845 362 170 17 33 370 20 350 1.04e-55 187
MsG0880045092.01.T01 MTR_4g014370 35.714 392 174 13 8 392 16 336 2.04e-54 183
MsG0880045092.01.T01 MTR_5g064700 38.177 351 165 16 82 393 31 368 3.19e-52 178
MsG0880045092.01.T01 MTR_7g016930 38.872 337 150 14 5 324 7 304 4.55e-52 177
MsG0880045092.01.T01 MTR_5g096900 41.228 342 146 15 1 316 1 313 9.75e-52 176
MsG0880045092.01.T01 MTR_1g050312 37.582 306 145 11 86 382 16 284 1.25e-51 174
MsG0880045092.01.T01 MTR_5g074800 34.254 362 194 16 54 393 1 340 1.02e-48 168
MsG0880045092.01.T01 MTR_6g079790 35.971 278 152 6 137 394 39 310 7.35e-48 165
MsG0880045092.01.T01 MTR_5g094350 39.456 294 115 11 13 277 11 270 1.04e-47 164
MsG0880045092.01.T01 MTR_8g033000 33.420 383 194 13 52 393 1 363 1.24e-47 166
MsG0880045092.01.T01 MTR_7g104710 37.346 324 146 11 2 309 5 287 1.49e-47 165
MsG0880045092.01.T01 MTR_6g004450 40.171 234 124 6 165 392 45 268 1.33e-46 160
MsG0880045092.01.T01 MTR_7g023800 32.000 325 157 9 77 384 25 302 3.04e-45 158
MsG0880045092.01.T01 MTR_6g070880 42.017 238 117 7 5 225 23 256 3.59e-45 157
MsG0880045092.01.T01 MTR_6g071420 42.017 238 117 7 5 225 23 256 3.59e-45 157
MsG0880045092.01.T01 MTR_2g021920 41.909 241 112 9 169 389 37 269 6.93e-45 156
MsG0880045092.01.T01 MTR_5g076490 36.486 370 173 18 52 393 1 336 2.80e-43 154
MsG0880045092.01.T01 MTR_5g086590 39.331 239 115 10 136 365 14 231 8.49e-43 150
MsG0880045092.01.T01 MTR_6g087620 32.911 316 157 11 86 383 1 279 2.20e-41 147
MsG0880045092.01.T01 MTR_8g073570 47.594 187 74 8 1 180 1 170 3.05e-40 141
MsG0880045092.01.T01 MTR_3g018750 39.113 248 121 9 168 393 2 241 3.10e-40 143
MsG0880045092.01.T01 MTR_5g097820 38.163 283 127 13 1 262 8 263 9.14e-40 143
MsG0880045092.01.T01 MTR_1g050308 38.095 231 120 9 1 225 23 236 6.04e-39 142
MsG0880045092.01.T01 MTR_1g050308 46.957 115 56 2 282 394 237 348 1.15e-22 98.2
MsG0880045092.01.T01 MTR_6g465360 40.984 244 115 10 1 223 51 286 1.28e-38 140
MsG0880045092.01.T01 MTR_4g016000 39.171 217 107 8 140 352 2 197 3.40e-38 137
MsG0880045092.01.T01 MTR_6g009350 39.175 194 106 4 169 356 8 195 1.14e-37 135
MsG0880045092.01.T01 MTR_6g090260 40.104 192 97 5 208 388 75 259 1.27e-37 137
MsG0880045092.01.T01 MTR_6g090260 60.714 56 22 0 8 63 13 68 8.82e-14 71.2
MsG0880045092.01.T01 MTR_1g076810 40.870 230 114 10 4 224 8 224 8.97e-37 142
MsG0880045092.01.T01 MTR_5g097850 40.206 194 94 5 213 394 63 246 1.19e-34 129
MsG0880045092.01.T01 MTR_5g023970 38.119 202 97 5 207 394 10 197 1.70e-34 127
MsG0880045092.01.T01 MTR_8g035690 36.201 279 128 14 148 392 40 302 2.52e-33 126
MsG0880045092.01.T01 MTR_7g019250 39.070 215 93 7 168 369 223 412 6.23e-33 129
MsG0880045092.01.T01 MTR_3g019290 37.885 227 76 9 4 215 3 179 8.31e-33 122
MsG0880045092.01.T01 MTR_5g098950 35.047 214 109 3 138 351 91 274 2.11e-31 120
MsG0880045092.01.T01 MTR_2g104260 35.842 279 145 10 15 274 14 277 7.94e-30 116
MsG0880045092.01.T01 MTR_3g047580 43.624 149 62 3 1 149 1 127 4.42e-29 110
MsG0880045092.01.T01 MTR_1g115205 34.221 263 117 10 6 254 18 238 8.51e-29 113
MsG0880045092.01.T01 MTR_1g047080 32.022 356 155 18 52 393 1 283 2.10e-28 113
MsG0880045092.01.T01 MTR_7g017120 38.265 196 105 6 207 394 80 267 9.32e-28 110
MsG0880045092.01.T01 MTR_7g017150 39.487 195 102 7 207 393 81 267 1.29e-27 110
MsG0880045092.01.T01 MTR_5g037190 34.524 252 123 8 15 258 16 233 1.86e-27 109
MsG0880045092.01.T01 MTR_6g079730 41.667 132 72 2 262 388 14 145 1.69e-26 103
MsG0880045092.01.T01 MTR_3g030620 38.857 175 92 8 231 391 7 180 7.81e-26 103
MsG0880045092.01.T01 MTR_5g066420 34.899 149 86 2 245 382 1 149 1.65e-24 98.6
MsG0880045092.01.T01 MTR_0667s0010 26.515 396 221 17 18 377 9 370 2.35e-24 103
MsG0880045092.01.T01 MTR_7g101200 33.621 232 112 10 134 355 37 236 6.94e-24 99.4
MsG0880045092.01.T01 MTR_2g028140 28.902 346 189 14 18 333 8 326 9.57e-23 99.4
MsG0880045092.01.T01 MTR_2g022020 44.444 99 53 1 288 386 17 113 3.57e-22 91.3
MsG0880045092.01.T01 MTR_5g096920 36.424 151 91 3 245 391 1 150 3.71e-22 92.4
MsG0880045092.01.T01 MTR_5g097660 36.290 124 70 2 267 389 1 116 7.59e-22 90.5
MsG0880045092.01.T01 MTR_1g068835 24.932 369 215 15 18 365 7 334 9.30e-22 96.3
MsG0880045092.01.T01 MTR_2g021150 28.972 321 193 10 14 328 13 304 9.49e-22 95.9
MsG0880045092.01.T01 MTR_1g037540 26.121 379 215 18 18 355 8 362 1.28e-21 95.9
MsG0880045092.01.T01 MTR_3g083010 26.590 346 200 15 18 335 9 328 3.41e-21 95.1
MsG0880045092.01.T01 MTR_5g097650 40.667 150 76 6 4 151 10 148 4.32e-21 89.7
MsG0880045092.01.T01 MTR_4g023080 24.433 397 246 13 6 394 2 352 1.28e-20 92.4
MsG0880045092.01.T01 MTR_4g133170 24.576 354 218 15 18 358 7 324 2.78e-20 92.0
MsG0880045092.01.T01 MTR_5g086780 42.105 114 61 1 261 369 115 228 4.78e-20 88.6
MsG0880045092.01.T01 MTR_5g086780 61.538 52 17 1 4 55 8 56 3.44e-11 63.2
MsG0880045092.01.T01 MTR_2g028160 27.381 336 201 13 18 332 8 321 5.69e-20 91.3
MsG0880045092.01.T01 MTR_1g009110 26.629 353 215 15 18 355 17 340 7.38e-20 90.5
MsG0880045092.01.T01 MTR_3g014540 26.087 322 195 11 15 328 29 315 7.73e-20 90.5
MsG0880045092.01.T01 MTR_1g068860 25.683 366 218 16 18 365 7 336 1.80e-19 89.4
MsG0880045092.01.T01 MTR_3g007410 28.000 325 181 15 18 329 55 339 2.22e-19 89.7
MsG0880045092.01.T01 MTR_4g021785 24.874 398 230 15 14 394 8 353 4.65e-19 88.2
MsG0880045092.01.T01 MTR_7g070440 26.113 337 194 14 13 329 5 306 8.21e-19 87.4
MsG0880045092.01.T01 MTR_5g091150 34.946 186 69 8 120 299 45 184 9.91e-19 84.3
MsG0880045092.01.T01 MTR_2g025420 24.318 403 226 19 10 365 1 371 1.00e-18 87.8
MsG0880045092.01.T01 MTR_3g007360 27.385 325 183 15 18 329 55 339 1.41e-18 87.0
MsG0880045092.01.T01 MTR_4g023090 27.298 359 205 15 4 346 5 323 1.42e-18 87.0
MsG0880045092.01.T01 MTR_6g053240 26.087 322 195 13 18 328 31 320 1.65e-18 87.0
MsG0880045092.01.T01 MTR_3g058480 28.519 270 135 13 18 268 42 272 1.82e-18 85.9
MsG0880045092.01.T01 MTR_2g028110 24.728 368 225 15 18 368 7 339 2.10e-18 86.3
MsG0880045092.01.T01 MTR_1g068875 26.216 370 208 17 18 365 7 333 2.43e-18 86.3
MsG0880045092.01.T01 MTR_3g006670 27.596 337 204 12 18 347 52 355 2.46e-18 86.7
MsG0880045092.01.T01 MTR_1g097560 24.219 384 211 16 3 358 24 355 2.49e-18 86.3
MsG0880045092.01.T01 MTR_4g094365 24.422 389 237 13 14 386 7 354 3.06e-18 85.9
MsG0880045092.01.T01 MTR_5g097540 38.514 148 78 5 207 351 96 233 4.68e-18 84.3
MsG0880045092.01.T01 MTR_4g023120 24.173 393 246 14 18 391 6 365 4.88e-18 85.1
MsG0880045092.01.T01 MTR_3g014570 26.744 344 197 14 18 347 32 334 7.06e-18 84.7
MsG0880045092.01.T01 MTR_5g096070 33.908 174 86 6 4 177 15 159 7.55e-18 80.5
MsG0880045092.01.T01 MTR_3g009310 27.077 325 182 13 18 329 45 327 7.86e-18 84.7
MsG0880045092.01.T01 MTR_4g055060 28.173 323 188 16 18 329 33 322 9.93e-18 84.3
MsG0880045092.01.T01 MTR_0044s0300 25.982 331 193 13 18 335 41 332 1.03e-17 84.3
MsG0880045092.01.T01 MTR_4g116330 25.189 397 255 13 6 393 14 377 1.25e-17 84.0
MsG0880045092.01.T01 MTR_5g036250 42.268 97 55 1 289 385 8 103 1.91e-17 80.1
MsG0880045092.01.T01 MTR_8g101580 25.826 333 186 13 22 338 53 340 2.13e-17 83.6
MsG0880045092.01.T01 MTR_2g024100 26.844 339 190 14 30 344 22 326 2.13e-17 83.6
MsG0880045092.01.T01 MTR_2g028130 26.706 337 202 15 18 333 8 320 2.56e-17 83.6
MsG0880045092.01.T01 MTR_3g013740 27.041 392 222 19 15 377 44 400 5.44e-17 82.4
MsG0880045092.01.T01 MTR_2g029990 26.000 350 205 14 18 350 54 366 6.37e-17 82.4
MsG0880045092.01.T01 MTR_2g047832 26.554 354 198 16 1 328 15 332 7.00e-17 82.4
MsG0880045092.01.T01 MTR_5g057790 27.647 340 191 18 18 341 49 349 7.61e-17 82.0
MsG0880045092.01.T01 MTR_2g021155 26.019 319 192 11 18 328 39 321 1.51e-16 82.0
MsG0880045092.01.T01 MTR_6g065980 26.506 332 194 15 1 328 1 286 1.66e-16 80.5
MsG0880045092.01.T01 MTR_3g013770 23.377 385 239 14 18 381 36 385 1.74e-16 80.9
MsG0880045092.01.T01 MTR_2g026010 25.283 265 166 11 122 368 93 343 2.02e-16 80.9
MsG0880045092.01.T01 MTR_1g022200 26.593 361 196 18 18 355 18 332 2.42e-16 80.5
MsG0880045092.01.T01 MTR_2g031680 25.745 369 217 16 18 368 9 338 5.84e-16 79.3
MsG0880045092.01.T01 MTR_3g036335 25.905 359 207 20 18 363 44 356 6.58e-16 79.0
MsG0880045092.01.T01 MTR_4g023130 22.475 396 214 12 6 394 2 311 7.51e-16 78.2
MsG0880045092.01.T01 MTR_2g046900 26.543 324 198 14 14 328 27 319 8.35e-16 79.0
MsG0880045092.01.T01 MTR_1g055135 27.368 380 222 17 4 366 2 344 9.85e-16 78.6
MsG0880045092.01.T01 MTR_3g047540 48.000 75 31 2 203 277 1 67 1.20e-15 72.4
MsG0880045092.01.T01 MTR_3g436150 27.864 323 195 13 18 328 35 331 1.39e-15 78.2
MsG0880045092.01.T01 MTR_5g057710 26.957 345 188 18 18 341 49 350 1.56e-15 78.2
MsG0880045092.01.T01 MTR_1g023400 24.363 353 210 15 18 354 6 317 1.63e-15 77.4
MsG0880045092.01.T01 MTR_2g055970 24.603 378 218 17 4 360 201 532 1.64e-15 78.6
MsG0880045092.01.T01 MTR_3g058470 26.061 330 159 14 18 328 40 303 1.70e-15 77.8
MsG0880045092.01.T01 MTR_2g426090 23.977 342 199 16 18 333 9 315 2.26e-15 77.8
MsG0880045092.01.T01 MTR_2g078850 26.266 316 193 13 18 328 33 313 2.64e-15 77.0
MsG0880045092.01.T01 MTR_0115s0020 23.243 370 233 14 10 353 5 349 5.21e-15 76.6
MsG0880045092.01.T01 MTR_6g027910 23.604 394 242 16 1 371 1 358 6.09e-15 76.3
MsG0880045092.01.T01 MTR_2g046830 26.409 337 198 15 2 328 12 308 7.06e-15 76.3
MsG0880045092.01.T01 MTR_2g046800 25.815 368 205 14 17 350 16 349 1.56e-14 75.1
MsG0880045092.01.T01 MTR_0064s0160 23.174 397 262 16 13 386 40 416 1.70e-14 75.1
MsG0880045092.01.T01 MTR_1g050305 45.783 83 40 2 294 371 21 103 1.84e-14 70.5
MsG0880045092.01.T01 MTR_2g046920 25.389 386 220 19 1 358 10 355 2.00e-14 74.3
MsG0880045092.01.T01 MTR_4g030830 22.333 403 231 13 13 369 7 373 2.02e-14 74.7
MsG0880045092.01.T01 MTR_3g011100 25.688 327 190 13 18 329 238 526 2.54e-14 75.1
MsG0880045092.01.T01 MTR_4g037465 26.629 353 192 16 4 329 10 322 3.82e-14 73.9
MsG0880045092.01.T01 MTR_8g467140 25.301 332 190 14 9 325 26 314 4.49e-14 73.2
MsG0880045092.01.T01 MTR_3g006570 23.323 313 207 11 18 328 24 305 5.37e-14 73.2
MsG0880045092.01.T01 MTR_5g007610 27.108 332 182 16 18 328 44 336 5.96e-14 73.2
MsG0880045092.01.T01 MTR_1g097490 26.074 326 204 13 5 328 39 329 8.06e-14 72.8
MsG0880045092.01.T01 MTR_0627s0010 25.210 357 213 14 5 328 25 360 1.27e-13 72.4
MsG0880045092.01.T01 MTR_6g087660 56.452 62 27 0 2 63 5 66 1.31e-13 69.3
MsG0880045092.01.T01 MTR_6g053260 23.975 317 203 13 18 328 340 624 2.27e-13 72.0
MsG0880045092.01.T01 MTR_5g010550 25.344 363 209 11 12 331 38 381 2.37e-13 71.6
MsG0880045092.01.T01 MTR_2g025960 28.095 210 119 11 132 328 25 215 2.71e-13 70.5
MsG0880045092.01.T01 MTR_5g010550 25.344 363 209 11 12 331 52 395 2.82e-13 71.6
MsG0880045092.01.T01 MTR_1g094210 25.387 323 185 11 15 328 57 332 3.77e-13 70.9
MsG0880045092.01.T01 MTR_3g011060 26.016 369 231 12 18 375 31 368 4.18e-13 70.5
MsG0880045092.01.T01 MTR_4g080200 26.421 299 169 15 15 302 3 261 4.31e-13 70.5
MsG0880045092.01.T01 MTR_1g094210 25.387 323 185 11 15 328 57 332 4.38e-13 70.9
MsG0880045092.01.T01 MTR_7g013590 25.857 321 193 15 18 328 39 324 4.54e-13 70.5
MsG0880045092.01.T01 MTR_4g061340 27.954 347 175 18 18 340 29 324 4.94e-13 70.5
MsG0880045092.01.T01 MTR_7g056710 25.269 372 199 14 1 344 4 324 5.99e-13 70.1
MsG0880045092.01.T01 MTR_8g073550 29.130 230 123 13 18 239 33 230 7.69e-13 68.2
MsG0880045092.01.T01 MTR_1g054575 25.949 316 190 14 15 325 52 328 9.28e-13 70.1
MsG0880045092.01.T01 MTR_1g050542 22.340 376 228 15 1 360 48 375 9.69e-13 69.7
MsG0880045092.01.T01 MTR_7g061050 24.781 343 189 12 14 329 12 312 1.74e-12 68.6
MsG0880045092.01.T01 MTR_8g041440 58.824 51 21 0 12 62 12 62 1.86e-12 63.9
MsG0880045092.01.T01 MTR_6g048140 24.924 329 186 14 18 328 42 327 6.60e-12 67.0
MsG0880045092.01.T01 MTR_4g013185 24.267 375 190 16 9 329 4 338 7.01e-12 67.0
MsG0880045092.01.T01 MTR_3g030350 21.579 380 246 14 18 393 38 369 9.33e-12 66.6
MsG0880045092.01.T01 MTR_4g117750 26.234 385 207 16 28 386 16 349 1.22e-11 66.6
MsG0880045092.01.T01 MTR_3g007430 24.299 321 195 13 18 328 46 328 1.38e-11 65.9
MsG0880045092.01.T01 MTR_5g046300 25.688 327 179 17 18 329 7 284 1.48e-11 65.5
MsG0880045092.01.T01 MTR_5g046290 25.688 327 179 17 18 329 7 284 1.48e-11 65.5
MsG0880045092.01.T01 MTR_5g011200 22.741 343 208 14 2 328 4 305 1.53e-11 65.9
MsG0880045092.01.T01 MTR_4g116330 27.715 267 157 10 6 270 14 246 1.64e-11 65.5
MsG0880045092.01.T01 MTR_4g094400 35.514 107 47 3 241 326 6 111 3.15e-11 60.8
MsG0880045092.01.T01 MTR_6g048120 22.581 372 234 13 18 377 39 368 3.57e-11 64.7
MsG0880045092.01.T01 MTR_7g061060 24.340 341 196 11 14 329 12 315 4.61e-11 64.3
MsG0880045092.01.T01 MTR_7g060940 27.239 268 131 14 3 254 6 225 5.48e-11 64.3
MsG0880045092.01.T01 MTR_1g055070 24.460 278 183 11 4 272 38 297 5.59e-11 63.9
MsG0880045092.01.T01 MTR_1g442850 25.595 336 199 11 13 329 3 306 5.82e-11 63.9
MsG0880045092.01.T01 MTR_6g027890 24.911 281 164 16 116 371 52 310 6.97e-11 63.5
MsG0880045092.01.T01 MTR_3g036290 25.294 340 192 15 18 347 25 312 9.53e-11 63.2
MsG0880045092.01.T01 MTR_4g031770 23.676 321 191 12 18 325 7 286 9.68e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045092.01.T01 AT4G12560 23.500 400 254 17 18 394 7 377 3.19e-15 77.4
MsG0880045092.01.T01 AT4G12560 23.500 400 254 17 18 394 7 377 3.19e-15 77.4
MsG0880045092.01.T01 AT4G12560 23.500 400 254 17 18 394 7 377 3.19e-15 77.4
MsG0880045092.01.T01 AT3G16210 22.590 332 188 10 14 335 4 276 3.60e-15 76.6
MsG0880045092.01.T01 AT1G47390 24.606 317 175 13 5 310 2 265 8.59e-15 75.5
MsG0880045092.01.T01 AT3G06240 23.855 415 228 18 6 372 27 401 8.48e-12 67.0

Find 78 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTACACCATATCGATTT+TGG 0.080510 8:+54087828 MsG0880045092.01.T01:CDS
CTACCTAACATTCATGTTTA+TGG 0.111418 8:+54087379 MsG0880045092.01.T01:CDS
TGCCTATACCTGACTCATTT+TGG 0.117646 8:+54087512 MsG0880045092.01.T01:CDS
TTCTGTTGTGTCATTTAATT+TGG 0.150912 8:+54087690 MsG0880045092.01.T01:CDS
TCTAGATTGGTGGTGTTAAA+TGG 0.154786 8:+54087769 MsG0880045092.01.T01:CDS
CGGAATAAGTTGATGAAATT+AGG 0.161536 8:-54087055 None:intergenic
ATCCTTTGTCTTCATGGATT+TGG 0.214145 8:+54087403 MsG0880045092.01.T01:CDS
TATGGTATCCTTTGTCTTCA+TGG 0.227272 8:+54087397 MsG0880045092.01.T01:CDS
TGGATTAGACTCTTCGATAT+TGG 0.266879 8:+54087874 MsG0880045092.01.T01:CDS
CACTTTGGAACCCTGTTATT+CGG 0.269298 8:+54087320 MsG0880045092.01.T01:CDS
CCACGATTTGAGAATCAATT+TGG 0.273200 8:+54087214 MsG0880045092.01.T01:CDS
ACCTTAACTTCCCGAATAAC+AGG 0.282717 8:-54087331 None:intergenic
CCCTGTTATTCGGGAAGTTA+AGG 0.338353 8:+54087330 MsG0880045092.01.T01:CDS
GGAATAAGTTGATGAAATTA+GGG 0.349203 8:-54087054 None:intergenic
TTCTTATTCTATTTCTAGAT+TGG 0.356927 8:+54087756 MsG0880045092.01.T01:CDS
AATCGCTTGAGAGATTTAAC+AGG 0.370740 8:-54086992 None:intergenic
GAATATATTTCCGTTCTTCC+CGG 0.373521 8:-54087929 None:intergenic
GGCTCTGATGTGTACTTGAA+TGG 0.377263 8:+54087628 MsG0880045092.01.T01:CDS
TTACTTGTGTTCACAAATCA+TGG 0.379932 8:+54087014 MsG0880045092.01.T01:CDS
TAACTGTTTATTCCTCCAAT+TGG 0.389748 8:-54088072 None:intergenic
TTCTCCAAGAGTTACTTCTT+AGG 0.391378 8:-54087546 None:intergenic
TTATTCGGCATGTTGGTTAT+CGG 0.395832 8:+54087455 MsG0880045092.01.T01:CDS
ATACCATAAACATGAATGTT+AGG 0.396531 8:-54087382 None:intergenic
TGGTTGGCGGTTTCAGATGA+TGG 0.397253 8:+54087661 MsG0880045092.01.T01:CDS
AATTTCACCCAAAATCGATA+TGG 0.412939 8:-54087836 None:intergenic
TTATTCTATTTCTAGATTGG+TGG 0.418145 8:+54087759 MsG0880045092.01.T01:CDS
CTAGATTGGTGGTGTTAAAT+GGG 0.421114 8:+54087770 MsG0880045092.01.T01:CDS
TGTTTGTGTTTATAACTGTT+GGG 0.427716 8:+54087282 MsG0880045092.01.T01:CDS
TCAGGCTCCTTTCGTTGTTT+AGG 0.431093 8:+54087607 MsG0880045092.01.T01:CDS
ACCTTCTTCTTCTCAGATGT+TGG 0.431709 8:-54086917 None:intergenic
GAGATGACTACAAGGTTATT+CGG 0.435916 8:+54087440 MsG0880045092.01.T01:CDS
GAACGATGATGCCTAACTAT+TGG 0.437005 8:-54087736 None:intergenic
TTGTTTGTGTTTATAACTGT+TGG 0.439055 8:+54087281 MsG0880045092.01.T01:CDS
GCTCTGATGTGTACTTGAAT+GGG 0.441308 8:+54087629 MsG0880045092.01.T01:CDS
GTTAATCATGTTATCGCAGC+CGG 0.443507 8:+54087910 MsG0880045092.01.T01:CDS
ATTCCTCACTTTCGTTGCTC+AGG 0.457770 8:+54087589 MsG0880045092.01.T01:CDS
TCCCAAAATGAGTCAGGTAT+AGG 0.472664 8:-54087514 None:intergenic
ACTTTGGAACCCTGTTATTC+GGG 0.479034 8:+54087321 MsG0880045092.01.T01:CDS
ACTTGAATGGGGTGTGCCAT+TGG 0.481374 8:+54087641 MsG0880045092.01.T01:CDS
TATATTTCCCAAAATGAGTC+AGG 0.481912 8:-54087520 None:intergenic
ATAGCCTAAGAAGTAACTCT+TGG 0.482779 8:+54087542 MsG0880045092.01.T01:CDS
GTTATCGCAGCCGGGAAGAA+CGG 0.494345 8:+54087919 MsG0880045092.01.T01:CDS
TTTAACAACCGAGGTGATTG+AGG 0.500673 8:+54087987 MsG0880045092.01.T01:CDS
CTTCTCAGATGTTGGAGTCA+TGG 0.501579 8:-54086909 None:intergenic
GAAGTTAAGGTCATCCCTCC+TGG 0.508634 8:+54087343 MsG0880045092.01.T01:CDS
TGGCGAGAGGTTTCAGAATG+TGG 0.510372 8:+54087180 MsG0880045092.01.T01:CDS
AAATTGGTGTCAAGGAATCA+TGG 0.510521 8:+54087854 MsG0880045092.01.T01:CDS
TGGGGTGTGCCATTGGTTGG+CGG 0.513142 8:+54087648 MsG0880045092.01.T01:CDS
CCTTGTAGTCATCTCTTACA+TGG 0.517115 8:-54087432 None:intergenic
GAATGGGGTGTGCCATTGGT+TGG 0.521249 8:+54087645 MsG0880045092.01.T01:CDS
TTTGGGTGAAATTGGTGTCA+AGG 0.531940 8:+54087846 MsG0880045092.01.T01:CDS
TACAAGGTTATTCGGCATGT+TGG 0.533578 8:+54087448 MsG0880045092.01.T01:CDS
GATTTGAGAATCAATTTGGT+AGG 0.537485 8:+54087218 MsG0880045092.01.T01:CDS
ATCATAGCGAGGTAGCACTT+TGG 0.555502 8:+54087305 MsG0880045092.01.T01:CDS
AATCGATATGGTGTAAGACT+TGG 0.567899 8:-54087824 None:intergenic
GGTAGATGCTTTACAAGACC+AGG 0.574036 8:-54087361 None:intergenic
TTTATTTGGTTTCTGGCGAG+AGG 0.579853 8:+54087167 MsG0880045092.01.T01:CDS
TCCAACATCTGAGAAGAAGA+AGG 0.586256 8:+54086916 MsG0880045092.01.T01:CDS
TTAATCATGTTATCGCAGCC+GGG 0.587027 8:+54087911 MsG0880045092.01.T01:CDS
ACATGATTAACATAAGATGA+AGG 0.589884 8:-54087898 None:intergenic
ACCGAGGTGATTGAGGAGAT+CGG 0.593782 8:+54087994 MsG0880045092.01.T01:CDS
ATCAGAGCCTAAACAACGAA+AGG 0.595115 8:-54087614 None:intergenic
CCATGTAAGAGATGACTACA+AGG 0.603062 8:+54087432 MsG0880045092.01.T01:CDS
CATCTGAAACCGCCAACCAA+TGG 0.608618 8:-54087657 None:intergenic
CAAACGCGTACGAGACAAAG+AGG 0.612008 8:-54087135 None:intergenic
CCAAATTGATTCTCAAATCG+TGG 0.613571 8:-54087214 None:intergenic
CCTTAACTTCCCGAATAACA+GGG 0.615999 8:-54087330 None:intergenic
CTCTGATGTGTACTTGAATG+GGG 0.618969 8:+54087630 MsG0880045092.01.T01:CDS
GAGCCTGAGCAACGAAAGTG+AGG 0.623588 8:-54087592 None:intergenic
ATCCAAATCCATGAAGACAA+AGG 0.627271 8:-54087405 None:intergenic
TTATTCCTCCAATTGGACCA+AGG 0.635075 8:-54088065 None:intergenic
ACAAACAATGCCATTAATAG+CGG 0.637818 8:-54087266 None:intergenic
ACCGATCTCCTCAATCACCT+CGG 0.661041 8:-54087995 None:intergenic
TAACTGTTGGGATCATAGCG+AGG 0.670287 8:+54087294 MsG0880045092.01.T01:CDS
ATCGCTTGAGAGATTTAACA+GGG 0.672589 8:-54086991 None:intergenic
AGATGCTTTACAAGACCAGG+AGG 0.687325 8:-54087358 None:intergenic
TAGATAAAGCAATGTCATCG+TGG 0.691893 8:-54086955 None:intergenic
GATGCTTTACAAGACCAGGA+GGG 0.719370 8:-54087357 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTCATAAATAAAAAGAA+TGG + Chr8:54087946-54087965 MsG0880045092.01.T01:CDS 10.0%
!!! TTCTTATTCTATTTCTAGAT+TGG + Chr8:54087756-54087775 MsG0880045092.01.T01:CDS 20.0%
! ACATGATTAACATAAGATGA+AGG - Chr8:54087901-54087920 None:intergenic 25.0%
! ATACCATAAACATGAATGTT+AGG - Chr8:54087385-54087404 None:intergenic 25.0%
! TGTAGTGAAAAATACATCAT+TGG - Chr8:54087716-54087735 None:intergenic 25.0%
! TGTTTGTGTTTATAACTGTT+GGG + Chr8:54087282-54087301 MsG0880045092.01.T01:CDS 25.0%
! TTGTTTGTGTTTATAACTGT+TGG + Chr8:54087281-54087300 MsG0880045092.01.T01:CDS 25.0%
!!! AGTTTGTTTTATTTGGTTTC+TGG + Chr8:54087160-54087179 MsG0880045092.01.T01:CDS 25.0%
!!! ATTTTGAAACAAGATTGTTG+CGG - Chr8:54087078-54087097 None:intergenic 25.0%
!!! ATTTTTTGTTCCGCTATTAA+TGG + Chr8:54087256-54087275 MsG0880045092.01.T01:CDS 25.0%
!!! GGAATAAGTTGATGAAATTA+GGG - Chr8:54087057-54087076 None:intergenic 25.0%
!!! GTTTGTGAGTTTGTTTTATT+TGG + Chr8:54087153-54087172 MsG0880045092.01.T01:CDS 25.0%
!!! TTATTCTATTTCTAGATTGG+TGG + Chr8:54087759-54087778 MsG0880045092.01.T01:CDS 25.0%
!!! TTCTGTTGTGTCATTTAATT+TGG + Chr8:54087690-54087709 MsG0880045092.01.T01:CDS 25.0%
AATTTCACCCAAAATCGATA+TGG - Chr8:54087839-54087858 None:intergenic 30.0%
ACAAACAATGCCATTAATAG+CGG - Chr8:54087269-54087288 None:intergenic 30.0%
CTACCTAACATTCATGTTTA+TGG + Chr8:54087379-54087398 MsG0880045092.01.T01:CDS 30.0%
GATTTGAGAATCAATTTGGT+AGG + Chr8:54087218-54087237 MsG0880045092.01.T01:CDS 30.0%
TAACTGTTTATTCCTCCAAT+TGG - Chr8:54088075-54088094 None:intergenic 30.0%
TATATTTCCCAAAATGAGTC+AGG - Chr8:54087523-54087542 None:intergenic 30.0%
TTACTTGTGTTCACAAATCA+TGG + Chr8:54087014-54087033 MsG0880045092.01.T01:CDS 30.0%
! AAGGTTTTTCTTGTAGAGTA+CGG - Chr8:54088049-54088068 None:intergenic 30.0%
! TTTTCACTACACCAATAGTT+AGG + Chr8:54087725-54087744 MsG0880045092.01.T01:CDS 30.0%
!! CGGAATAAGTTGATGAAATT+AGG - Chr8:54087058-54087077 None:intergenic 30.0%
!!! ATATCGATTTTGGGTGAAAT+TGG + Chr8:54087838-54087857 MsG0880045092.01.T01:CDS 30.0%
!!! TCTTACACCATATCGATTTT+GGG + Chr8:54087829-54087848 MsG0880045092.01.T01:CDS 30.0%
!!! TTGTTTTGATTTAACAACCG+AGG + Chr8:54087978-54087997 MsG0880045092.01.T01:CDS 30.0%
AAGAAAAACCTTGGTCCAAT+TGG + Chr8:54088057-54088076 MsG0880045092.01.T01:CDS 35.0%
AATCGATATGGTGTAAGACT+TGG - Chr8:54087827-54087846 None:intergenic 35.0%
AATCGCTTGAGAGATTTAAC+AGG - Chr8:54086995-54087014 None:intergenic 35.0%
ATAGCCTAAGAAGTAACTCT+TGG + Chr8:54087542-54087561 MsG0880045092.01.T01:CDS 35.0%
ATCCAAATCCATGAAGACAA+AGG - Chr8:54087408-54087427 None:intergenic 35.0%
ATCCTTTGTCTTCATGGATT+TGG + Chr8:54087403-54087422 MsG0880045092.01.T01:CDS 35.0%
ATCGCTTGAGAGATTTAACA+GGG - Chr8:54086994-54087013 None:intergenic 35.0%
CCACGATTTGAGAATCAATT+TGG + Chr8:54087214-54087233 MsG0880045092.01.T01:CDS 35.0%
GAATATATTTCCGTTCTTCC+CGG - Chr8:54087932-54087951 None:intergenic 35.0%
GAGATGACTACAAGGTTATT+CGG + Chr8:54087440-54087459 MsG0880045092.01.T01:CDS 35.0%
GTACTCTACAAGAAAAACCT+TGG + Chr8:54088048-54088067 MsG0880045092.01.T01:CDS 35.0%
TAGATAAAGCAATGTCATCG+TGG - Chr8:54086958-54086977 None:intergenic 35.0%
TATGGTATCCTTTGTCTTCA+TGG + Chr8:54087397-54087416 MsG0880045092.01.T01:CDS 35.0%
TTCTCCAAGAGTTACTTCTT+AGG - Chr8:54087549-54087568 None:intergenic 35.0%
! ATAGCGGAACAAAAAATACG+AGG - Chr8:54087253-54087272 None:intergenic 35.0%
! CCAAATTGATTCTCAAATCG+TGG - Chr8:54087217-54087236 None:intergenic 35.0%
! TGGATTAGACTCTTCGATAT+TGG + Chr8:54087874-54087893 MsG0880045092.01.T01:CDS 35.0%
! TTATTCGGCATGTTGGTTAT+CGG + Chr8:54087455-54087474 MsG0880045092.01.T01:CDS 35.0%
!! AAATTGGTGTCAAGGAATCA+TGG + Chr8:54087854-54087873 MsG0880045092.01.T01:CDS 35.0%
!! ATTGAGGAGATCGGTTTTAA+AGG + Chr8:54088003-54088022 MsG0880045092.01.T01:CDS 35.0%
!! CTAGATTGGTGGTGTTAAAT+GGG + Chr8:54087770-54087789 MsG0880045092.01.T01:CDS 35.0%
!! TCTAGATTGGTGGTGTTAAA+TGG + Chr8:54087769-54087788 MsG0880045092.01.T01:CDS 35.0%
!!! GTCTTACACCATATCGATTT+TGG + Chr8:54087828-54087847 MsG0880045092.01.T01:CDS 35.0%
AAAAACCTTGGTCCAATTGG+AGG + Chr8:54088060-54088079 MsG0880045092.01.T01:CDS 40.0%
ACCTTAACTTCCCGAATAAC+AGG - Chr8:54087334-54087353 None:intergenic 40.0%
ACCTTCTTCTTCTCAGATGT+TGG - Chr8:54086920-54086939 None:intergenic 40.0%
ATCAGAGCCTAAACAACGAA+AGG - Chr8:54087617-54087636 None:intergenic 40.0%
CCATGTAAGAGATGACTACA+AGG + Chr8:54087432-54087451 MsG0880045092.01.T01:CDS 40.0%
CCTTAACTTCCCGAATAACA+GGG - Chr8:54087333-54087352 None:intergenic 40.0%
CCTTGTAGTCATCTCTTACA+TGG - Chr8:54087435-54087454 None:intergenic 40.0%
CTCTGATGTGTACTTGAATG+GGG + Chr8:54087630-54087649 MsG0880045092.01.T01:CDS 40.0%
GAACGATGATGCCTAACTAT+TGG - Chr8:54087739-54087758 None:intergenic 40.0%
GCTCTGATGTGTACTTGAAT+GGG + Chr8:54087629-54087648 MsG0880045092.01.T01:CDS 40.0%
GTTAATCATGTTATCGCAGC+CGG + Chr8:54087910-54087929 MsG0880045092.01.T01:CDS 40.0%
TACAAGGTTATTCGGCATGT+TGG + Chr8:54087448-54087467 MsG0880045092.01.T01:CDS 40.0%
TCCAACATCTGAGAAGAAGA+AGG + Chr8:54086916-54086935 MsG0880045092.01.T01:CDS 40.0%
TCCCAAAATGAGTCAGGTAT+AGG - Chr8:54087517-54087536 None:intergenic 40.0%
TTAATCATGTTATCGCAGCC+GGG + Chr8:54087911-54087930 MsG0880045092.01.T01:CDS 40.0%
TTATTCCTCCAATTGGACCA+AGG - Chr8:54088068-54088087 None:intergenic 40.0%
TTTAACAACCGAGGTGATTG+AGG + Chr8:54087987-54088006 MsG0880045092.01.T01:CDS 40.0%
! GCCTATACCTGACTCATTTT+GGG + Chr8:54087513-54087532 MsG0880045092.01.T01:CDS 40.0%
! TGCCTATACCTGACTCATTT+TGG + Chr8:54087512-54087531 MsG0880045092.01.T01:CDS 40.0%
!! ACTTTGGAACCCTGTTATTC+GGG + Chr8:54087321-54087340 MsG0880045092.01.T01:CDS 40.0%
!! CACTTTGGAACCCTGTTATT+CGG + Chr8:54087320-54087339 MsG0880045092.01.T01:CDS 40.0%
!! TTTATTTGGTTTCTGGCGAG+AGG + Chr8:54087167-54087186 MsG0880045092.01.T01:CDS 40.0%
!! TTTGGGTGAAATTGGTGTCA+AGG + Chr8:54087846-54087865 MsG0880045092.01.T01:CDS 40.0%
AGATGCTTTACAAGACCAGG+AGG - Chr8:54087361-54087380 None:intergenic 45.0%
ATCATAGCGAGGTAGCACTT+TGG + Chr8:54087305-54087324 MsG0880045092.01.T01:CDS 45.0%
ATTCCTCACTTTCGTTGCTC+AGG + Chr8:54087589-54087608 MsG0880045092.01.T01:CDS 45.0%
CCCTGTTATTCGGGAAGTTA+AGG + Chr8:54087330-54087349 MsG0880045092.01.T01:CDS 45.0%
GATGCTTTACAAGACCAGGA+GGG - Chr8:54087360-54087379 None:intergenic 45.0%
GGTAGATGCTTTACAAGACC+AGG - Chr8:54087364-54087383 None:intergenic 45.0%
TAACTGTTGGGATCATAGCG+AGG + Chr8:54087294-54087313 MsG0880045092.01.T01:CDS 45.0%
TCAGGCTCCTTTCGTTGTTT+AGG + Chr8:54087607-54087626 MsG0880045092.01.T01:CDS 45.0%
! GGCTCTGATGTGTACTTGAA+TGG + Chr8:54087628-54087647 MsG0880045092.01.T01:CDS 45.0%
!!! GAGGAGATCGGTTTTAAAGG+TGG + Chr8:54088006-54088025 MsG0880045092.01.T01:CDS 45.0%
ACCGAGGTGATTGAGGAGAT+CGG + Chr8:54087994-54088013 MsG0880045092.01.T01:CDS 50.0%
ACCGATCTCCTCAATCACCT+CGG - Chr8:54087998-54088017 None:intergenic 50.0%
ACTTGAATGGGGTGTGCCAT+TGG + Chr8:54087641-54087660 MsG0880045092.01.T01:CDS 50.0%
CAAACGCGTACGAGACAAAG+AGG - Chr8:54087138-54087157 None:intergenic 50.0%
GAAGTTAAGGTCATCCCTCC+TGG + Chr8:54087343-54087362 MsG0880045092.01.T01:CDS 50.0%
TGGCGAGAGGTTTCAGAATG+TGG + Chr8:54087180-54087199 MsG0880045092.01.T01:CDS 50.0%
TGGTTGGCGGTTTCAGATGA+TGG + Chr8:54087661-54087680 MsG0880045092.01.T01:CDS 50.0%
! CATCTGAAACCGCCAACCAA+TGG - Chr8:54087660-54087679 None:intergenic 50.0%
GAGCCTGAGCAACGAAAGTG+AGG - Chr8:54087595-54087614 None:intergenic 55.0%
GTTATCGCAGCCGGGAAGAA+CGG + Chr8:54087919-54087938 MsG0880045092.01.T01:CDS 55.0%
! GAATGGGGTGTGCCATTGGT+TGG + Chr8:54087645-54087664 MsG0880045092.01.T01:CDS 55.0%
! TGGGGTGTGCCATTGGTTGG+CGG + Chr8:54087648-54087667 MsG0880045092.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 54086911 54088095 54086911 ID=MsG0880045092.01;Name=MsG0880045092.01
Chr8 mRNA 54086911 54088095 54086911 ID=MsG0880045092.01.T01;Parent=MsG0880045092.01;Name=MsG0880045092.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|394
Chr8 exon 54086911 54088095 54086911 ID=MsG0880045092.01.T01:exon:23315;Parent=MsG0880045092.01.T01
Chr8 CDS 54086911 54088095 54086911 ID=MsG0880045092.01.T01:cds;Parent=MsG0880045092.01.T01
Gene Sequence

>MsG0880045092.01.T01

ATGACTCCAACATCTGAGAAGAAGAAGGTTAGTTGTAGCTATATCCACGATGACATTGCTTTATCTATTCTCTCTAAACTCCCTGTTAAATCTCTCAAGCGATTTACTTGTGTTCACAAATCATGGTCTCTTTTATTTCAAAACCCTAATTTCATCAACTTATTCCGCAACAATCTTGTTTCAAAATCTCGTTATGATGACGACGACGATGATGATGCGTGTTTCCTCTTTGTCTCGTACGCGTTTGTGAGTTTGTTTTATTTGGTTTCTGGCGAGAGGTTTCAGAATGTGGTAAATCTGCTGCCACGATTTGAGAATCAATTTGGTAGGCATTTTCATCCTCGTATTTTTTGTTCCGCTATTAATGGCATTGTTTGTGTTTATAACTGTTGGGATCATAGCGAGGTAGCACTTTGGAACCCTGTTATTCGGGAAGTTAAGGTCATCCCTCCTGGTCTTGTAAAGCATCTACCTAACATTCATGTTTATGGTATCCTTTGTCTTCATGGATTTGGATATGACCATGTAAGAGATGACTACAAGGTTATTCGGCATGTTGGTTATCGGTATATATCTAATCATTATTCTCAGAAAGAAGATTTGCCTATACCTGACTCATTTTGGGAAATATATAGCCTAAGAAGTAACTCTTGGAGAAAAGTTAATGTTGATATACTAATTCCTCACTTTCGTTGCTCAGGCTCCTTTCGTTGTTTAGGCTCTGATGTGTACTTGAATGGGGTGTGCCATTGGTTGGCGGTTTCAGATGATGGAACAACTTCTGTTGTGTCATTTAATTTGGCCAATGATGTATTTTTCACTACACCAATAGTTAGGCATCATCGTTCTTATTCTATTTCTAGATTGGTGGTGTTAAATGGGTTCTTAGCGATGATCACAGATTATTATACAACCAAGTCTTACACCATATCGATTTTGGGTGAAATTGGTGTCAAGGAATCATGGATTAGACTCTTCGATATTGGACCTTCATCTTATGTTAATCATGTTATCGCAGCCGGGAAGAACGGAAATATATTCATAAATAAAAAGAATGGTAAAATAGCTTGTTTTGATTTAACAACCGAGGTGATTGAGGAGATCGGTTTTAAAGGTGGTAGTCATGTATGTCAAACCGTACTCTACAAGAAAAACCTTGGTCCAATTGGAGGAATAAACAGTTAA
Protein sequence

>MsG0880045092.01.T01

MTPTSEKKKVSCSYIHDDIALSILSKLPVKSLKRFTCVHKSWSLLFQNPNFINLFRNNLVSKSRYDDDDDDDACFLFVSYAFVSLFYLVSGERFQNVVNLLPRFENQFGRHFHPRIFCSAINGIVCVYNCWDHSEVALWNPVIREVKVIPPGLVKHLPNIHVYGILCLHGFGYDHVRDDYKVIRHVGYRYISNHYSQKEDLPIPDSFWEIYSLRSNSWRKVNVDILIPHFRCSGSFRCLGSDVYLNGVCHWLAVSDDGTTSVVSFNLANDVFFTTPIVRHHRSYSISRLVVLNGFLAMITDYYTTKSYTISILGEIGVKESWIRLFDIGPSSYVNHVIAAGKNGNIFINKKNGKIACFDLTTEVIEEIGFKGGSHVCQTVLYKKNLGPIGGINS*