AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009744.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009744.01.T01 MTR_8g013000 72.428 243 41 3 1 221 1 239 6.61e-116 337
MsG0280009744.01.T01 MTR_2g064950 77.232 224 40 4 1 215 1 222 3.49e-113 329
MsG0280009744.01.T01 MTR_7g079640 57.676 241 50 7 1 220 5 214 3.34e-75 232
MsG0280009744.01.T01 MTR_7g069550 51.429 245 89 5 1 221 5 243 9.65e-72 223
MsG0280009744.01.T01 MTR_5g072060 54.630 216 69 4 8 201 4 212 5.78e-67 217
MsG0280009744.01.T01 MTR_4g055820 47.598 229 94 4 4 211 8 231 1.35e-62 199
MsG0280009744.01.T01 MTR_2g104340 44.726 237 98 7 1 216 5 229 2.82e-54 179
MsG0280009744.01.T01 MTR_8g041270 44.351 239 95 5 1 211 6 234 5.17e-53 176
MsG0280009744.01.T01 MTR_1g007410 42.616 237 102 5 1 211 13 241 2.73e-49 166
MsG0280009744.01.T01 MTR_8g063440 42.982 228 96 5 5 212 7 220 4.84e-48 162
MsG0280009744.01.T01 MTR_5g097330 39.331 239 110 5 4 215 10 240 5.19e-48 162
MsG0280009744.01.T01 MTR_2g104280 42.735 234 98 6 5 211 9 233 5.83e-48 162
MsG0280009744.01.T01 MTR_2g022000 42.060 233 107 5 5 210 11 242 1.03e-47 162
MsG0280009744.01.T01 MTR_4g102410 38.793 232 109 4 4 211 55 277 9.88e-47 160
MsG0280009744.01.T01 MTR_4g117550 41.304 230 110 5 1 211 8 231 3.47e-46 157
MsG0280009744.01.T01 MTR_5g074800 50.276 181 69 5 49 211 1 178 4.48e-46 156
MsG0280009744.01.T01 MTR_2g104260 42.553 235 105 7 1 211 5 233 9.79e-46 153
MsG0280009744.01.T01 MTR_5g096630 41.228 228 109 2 4 211 12 234 1.10e-45 157
MsG0280009744.01.T01 MTR_2g038680 42.017 238 105 7 5 211 11 246 5.01e-45 155
MsG0280009744.01.T01 MTR_0129s0070 40.329 243 113 7 1 221 8 240 8.13e-45 154
MsG0280009744.01.T01 MTR_7g017040 42.731 227 97 5 5 211 11 224 2.35e-44 153
MsG0280009744.01.T01 MTR_0129s0120 39.496 238 120 6 2 221 9 240 8.39e-44 151
MsG0280009744.01.T01 MTR_0129s0050 41.736 242 104 9 1 211 5 240 1.13e-43 151
MsG0280009744.01.T01 MTR_5g097820 38.525 244 95 8 5 214 16 238 3.31e-43 146
MsG0280009744.01.T01 MTR_8g464770 38.333 240 108 7 5 221 7 229 5.51e-43 149
MsG0280009744.01.T01 MTR_7g017170 40.444 225 104 5 3 207 11 225 5.92e-43 149
MsG0280009744.01.T01 MTR_7g017130 40.444 225 104 5 3 207 11 225 6.18e-43 149
MsG0280009744.01.T01 MTR_5g059430 38.247 251 101 9 1 211 17 253 1.15e-42 149
MsG0280009744.01.T01 MTR_2g021770 37.975 237 112 5 4 211 6 236 1.05e-41 146
MsG0280009744.01.T01 MTR_5g037680 39.076 238 93 8 3 211 1 215 1.21e-41 147
MsG0280009744.01.T01 MTR_3g011120 40.359 223 97 7 9 211 13 219 2.67e-41 144
MsG0280009744.01.T01 MTR_6g090180 38.750 240 105 6 4 211 41 270 2.69e-41 145
MsG0280009744.01.T01 MTR_2g021800 39.076 238 116 5 2 211 8 244 3.30e-41 145
MsG0280009744.01.T01 MTR_2g021950 40.529 227 104 7 4 210 10 225 8.15e-41 143
MsG0280009744.01.T01 MTR_5g069390 38.683 243 100 10 3 211 19 246 1.33e-40 145
MsG0280009744.01.T01 MTR_5g024260 39.056 233 98 6 4 211 15 228 2.79e-40 142
MsG0280009744.01.T01 MTR_7g016930 40.351 228 87 5 4 211 10 208 5.01e-40 140
MsG0280009744.01.T01 MTR_6g070880 37.449 243 109 8 5 214 27 259 2.22e-39 136
MsG0280009744.01.T01 MTR_6g071420 37.449 243 109 8 5 214 27 259 2.22e-39 136
MsG0280009744.01.T01 MTR_5g097220 40.244 246 101 11 1 211 5 239 3.15e-39 139
MsG0280009744.01.T01 MTR_8g012090 38.017 242 78 4 2 216 8 204 1.39e-38 136
MsG0280009744.01.T01 MTR_0054s0090 38.272 243 106 9 5 215 12 242 1.48e-38 137
MsG0280009744.01.T01 MTR_8g467670 39.662 237 103 8 9 221 13 233 1.69e-38 137
MsG0280009744.01.T01 MTR_5g091140 40.465 215 103 8 4 209 42 240 4.94e-38 136
MsG0280009744.01.T01 MTR_0831s0010 38.158 228 117 5 8 221 48 265 6.94e-38 136
MsG0280009744.01.T01 MTR_6g461660 36.864 236 110 4 4 211 13 237 8.69e-38 135
MsG0280009744.01.T01 MTR_1g098180 42.268 194 95 5 8 200 17 194 1.04e-37 134
MsG0280009744.01.T01 MTR_6g086825 37.118 229 107 5 8 211 68 284 1.06e-37 136
MsG0280009744.01.T01 MTR_5g037190 39.726 219 106 5 3 201 9 221 1.43e-37 131
MsG0280009744.01.T01 MTR_0054s0100 39.506 243 105 10 5 215 12 244 1.84e-37 135
MsG0280009744.01.T01 MTR_0134s0060 39.669 242 106 8 4 211 6 241 4.63e-37 134
MsG0280009744.01.T01 MTR_1g007450 40.870 230 108 7 4 213 6 227 2.40e-36 132
MsG0280009744.01.T01 MTR_2g066200 35.622 233 104 6 4 211 6 217 1.33e-35 129
MsG0280009744.01.T01 MTR_8g039500 34.764 233 97 7 4 211 6 208 8.08e-35 127
MsG0280009744.01.T01 MTR_4g014370 36.364 264 104 11 3 219 4 250 9.29e-35 127
MsG0280009744.01.T01 MTR_1g053510 38.115 244 103 9 4 208 8 242 1.78e-34 127
MsG0280009744.01.T01 MTR_6g079770 35.968 253 116 8 4 219 11 254 3.31e-34 126
MsG0280009744.01.T01 MTR_1g007430 38.636 220 101 7 17 213 3 211 4.05e-34 124
MsG0280009744.01.T01 MTR_1g076810 36.134 238 114 5 5 220 13 234 4.32e-34 128
MsG0280009744.01.T01 MTR_5g096900 35.772 246 90 10 5 211 7 223 2.01e-33 122
MsG0280009744.01.T01 MTR_8g046310 35.965 228 90 7 8 208 14 212 2.42e-33 123
MsG0280009744.01.T01 MTR_6g465360 38.197 233 92 10 4 196 56 276 6.13e-33 120
MsG0280009744.01.T01 MTR_5g097350 37.860 243 104 6 2 215 8 232 1.98e-32 121
MsG0280009744.01.T01 MTR_2g066170 35.622 233 104 8 4 211 6 217 7.20e-32 119
MsG0280009744.01.T01 MTR_8g033140 37.548 261 98 13 4 211 11 259 7.63e-32 120
MsG0280009744.01.T01 MTR_8g064890 37.553 237 102 11 4 211 9 228 1.40e-31 119
MsG0280009744.01.T01 MTR_3g019290 37.981 208 91 7 1 200 1 178 1.74e-31 114
MsG0280009744.01.T01 MTR_5g022850 38.914 221 103 8 1 220 7 196 1.95e-31 118
MsG0280009744.01.T01 MTR_8g046220 34.583 240 105 7 8 208 15 241 3.07e-31 118
MsG0280009744.01.T01 MTR_8g033110 35.743 249 112 7 9 219 13 251 4.34e-31 118
MsG0280009744.01.T01 MTR_6g079810 36.170 235 108 9 9 211 69 293 6.91e-31 118
MsG0280009744.01.T01 MTR_2g034700 34.802 227 102 6 9 211 13 217 1.50e-30 116
MsG0280009744.01.T01 MTR_2g065860 32.218 239 108 6 4 211 6 221 7.74e-30 114
MsG0280009744.01.T01 MTR_8g032980 35.223 247 96 8 8 208 14 242 9.29e-30 114
MsG0280009744.01.T01 MTR_8g046200 33.585 265 101 9 4 208 7 256 1.96e-29 114
MsG0280009744.01.T01 MTR_8g033090 34.263 251 116 8 9 221 13 252 6.06e-29 112
MsG0280009744.01.T01 MTR_5g097680 33.977 259 107 8 4 211 11 256 7.78e-29 112
MsG0280009744.01.T01 MTR_8g064790 43.182 176 75 7 4 159 9 179 1.56e-28 110
MsG0280009744.01.T01 MTR_1g050308 33.480 227 114 6 4 211 28 236 4.23e-28 108
MsG0280009744.01.T01 MTR_7g111700 34.583 240 98 8 2 206 7 222 6.83e-28 108
MsG0280009744.01.T01 MTR_2g066150 35.519 183 86 5 4 166 6 176 1.48e-27 107
MsG0280009744.01.T01 MTR_4g130330 33.190 232 107 6 9 211 6 218 1.50e-27 108
MsG0280009744.01.T01 MTR_4g028660 32.520 246 118 9 1 215 4 232 2.04e-27 108
MsG0280009744.01.T01 MTR_4g027450 32.520 246 118 9 1 215 4 232 2.04e-27 108
MsG0280009744.01.T01 MTR_4g028680 33.740 246 104 10 1 209 4 227 2.18e-27 107
MsG0280009744.01.T01 MTR_8g063330 32.906 234 126 5 9 221 13 236 2.69e-27 108
MsG0280009744.01.T01 MTR_7g104710 36.150 213 103 6 4 211 11 195 3.79e-27 105
MsG0280009744.01.T01 MTR_6g080680 36.555 238 94 10 6 211 15 227 4.95e-27 107
MsG0280009744.01.T01 MTR_4g028510 33.766 231 105 8 10 209 16 229 7.01e-27 107
MsG0280009744.01.T01 MTR_8g073570 38.636 176 84 6 1 158 1 170 1.64e-26 100
MsG0280009744.01.T01 MTR_2g065840 32.099 243 117 7 4 218 6 228 3.07e-26 104
MsG0280009744.01.T01 MTR_8g018110 33.065 248 121 6 9 219 13 252 4.02e-26 104
MsG0280009744.01.T01 MTR_5g096910 32.377 244 109 8 2 211 9 230 4.22e-26 104
MsG0280009744.01.T01 MTR_5g074850 36.017 236 111 9 4 211 29 252 8.18e-26 105
MsG0280009744.01.T01 MTR_4g028750 31.276 243 110 9 1 207 4 225 2.96e-25 102
MsG0280009744.01.T01 MTR_5g094350 35.556 225 113 9 6 211 9 220 7.59e-25 99.0
MsG0280009744.01.T01 MTR_5g097650 39.490 157 56 5 8 142 20 159 9.79e-25 95.9
MsG0280009744.01.T01 MTR_5g092860 35.610 205 94 8 28 211 20 207 4.43e-24 98.6
MsG0280009744.01.T01 MTR_1g115205 32.900 231 98 7 10 219 29 223 7.03e-24 95.9
MsG0280009744.01.T01 MTR_5g075370 34.188 234 111 9 9 211 7 228 9.42e-24 99.4
MsG0280009744.01.T01 MTR_5g092850 31.416 226 122 7 9 211 15 230 5.41e-22 93.2
MsG0280009744.01.T01 MTR_4g014370 34.842 221 83 11 3 219 15 178 6.96e-22 92.0
MsG0280009744.01.T01 MTR_6g478230 32.340 235 101 8 3 211 20 222 5.60e-21 90.5
MsG0280009744.01.T01 MTR_8g036970 35.821 201 80 9 18 211 6 164 8.13e-21 89.7
MsG0280009744.01.T01 MTR_8g041440 54.667 75 34 0 1 75 6 80 3.17e-20 82.8
MsG0280009744.01.T01 MTR_8g063370 29.741 232 116 7 1 208 15 223 7.20e-20 87.0
MsG0280009744.01.T01 MTR_3g047580 53.623 69 32 0 4 72 8 76 1.33e-19 81.6
MsG0280009744.01.T01 MTR_8g063310 29.954 217 123 5 5 209 17 216 1.73e-18 83.6
MsG0280009744.01.T01 MTR_5g098950 43.564 101 45 2 111 211 89 177 3.37e-17 78.6
MsG0280009744.01.T01 MTR_6g090250 30.702 228 105 7 28 211 29 247 3.16e-16 77.0
MsG0280009744.01.T01 MTR_5g096070 33.951 162 77 6 3 155 19 159 1.61e-15 71.6
MsG0280009744.01.T01 MTR_5g076490 32.571 175 95 5 47 211 1 162 1.98e-13 68.6
MsG0280009744.01.T01 MTR_4g007940 33.908 174 83 6 60 211 4 167 3.45e-13 67.8
MsG0280009744.01.T01 MTR_6g079790 40.952 105 45 5 112 211 39 131 4.35e-13 67.4
MsG0280009744.01.T01 MTR_5g094360 42.857 91 41 5 124 211 40 122 1.70e-12 63.5
MsG0280009744.01.T01 MTR_5g043605 31.469 143 57 5 89 211 49 170 3.82e-12 65.1
MsG0280009744.01.T01 MTR_6g087660 50.794 63 29 1 9 69 17 79 6.01e-12 62.8
MsG0280009744.01.T01 MTR_5g086780 59.615 52 21 0 1 52 7 58 3.30e-11 61.2
MsG0280009744.01.T01 MTR_1g050312 28.966 145 67 5 84 211 16 141 4.26e-11 61.6
MsG0280009744.01.T01 MTR_6g090260 54.902 51 23 0 9 59 19 69 8.57e-11 60.5
MsG0280009744.01.T03 MTR_2g064950 79.825 114 21 1 1 114 1 112 1.13e-55 181
MsG0280009744.01.T03 MTR_8g013000 82.243 107 19 0 1 107 1 107 3.30e-54 177
MsG0280009744.01.T03 MTR_7g079640 75.238 105 24 2 1 105 5 107 1.22e-43 149
MsG0280009744.01.T03 MTR_5g072060 67.347 98 29 1 8 105 4 98 4.64e-38 137
MsG0280009744.01.T03 MTR_7g069550 59.633 109 42 1 1 107 5 113 1.35e-36 131
MsG0280009744.01.T03 MTR_4g055820 57.407 108 45 1 4 111 8 114 4.33e-34 123
MsG0280009744.01.T03 MTR_1g007410 55.769 104 46 0 1 104 13 116 1.40e-31 117
MsG0280009744.01.T03 MTR_5g037680 46.552 116 55 3 3 111 1 116 9.81e-28 108
MsG0280009744.01.T03 MTR_5g059430 46.847 111 50 2 1 102 17 127 1.10e-27 107
MsG0280009744.01.T03 MTR_8g063440 50.467 107 51 1 4 110 6 110 2.66e-27 106
MsG0280009744.01.T03 MTR_8g041270 50.943 106 48 1 1 106 6 107 2.93e-27 106
MsG0280009744.01.T03 MTR_4g117550 50.000 116 53 3 1 113 8 121 3.67e-27 105
MsG0280009744.01.T03 MTR_5g097820 52.941 102 41 3 5 102 16 114 3.93e-27 103
MsG0280009744.01.T03 MTR_2g104340 42.953 149 77 4 1 149 5 145 5.73e-27 105
MsG0280009744.01.T03 MTR_6g465360 50.980 102 44 2 4 103 56 153 5.85e-27 103
MsG0280009744.01.T03 MTR_5g069390 49.038 104 49 2 3 102 19 122 9.04e-27 105
MsG0280009744.01.T03 MTR_2g104280 51.402 107 47 2 5 111 9 110 2.74e-26 103
MsG0280009744.01.T03 MTR_1g076810 51.546 97 45 1 5 101 13 107 4.23e-26 104
MsG0280009744.01.T03 MTR_0129s0050 50.000 114 52 3 1 113 5 114 4.28e-26 103
MsG0280009744.01.T03 MTR_7g017130 50.000 100 49 1 3 102 11 109 4.84e-26 102
MsG0280009744.01.T03 MTR_7g017170 50.000 100 49 1 3 102 11 109 5.08e-26 102
MsG0280009744.01.T03 MTR_8g012090 51.887 106 42 1 2 107 8 104 5.37e-26 102
MsG0280009744.01.T03 MTR_4g102410 47.115 104 54 1 4 106 55 158 7.50e-26 102
MsG0280009744.01.T03 MTR_7g017040 48.148 108 52 1 4 111 10 113 7.89e-26 102
MsG0280009744.01.T03 MTR_5g037190 45.872 109 58 1 3 111 9 116 6.92e-25 97.4
MsG0280009744.01.T03 MTR_2g022000 47.664 107 50 1 5 105 11 117 7.20e-25 100
MsG0280009744.01.T03 MTR_5g096630 54.082 98 45 0 4 101 12 109 1.40e-24 99.0
MsG0280009744.01.T03 MTR_2g038680 48.571 105 49 2 5 106 11 113 1.48e-24 99.0
MsG0280009744.01.T03 MTR_5g091140 48.571 105 52 2 4 107 42 145 2.07e-24 98.6
MsG0280009744.01.T03 MTR_5g024260 50.505 99 44 2 4 101 15 109 3.02e-24 98.2
MsG0280009744.01.T03 MTR_8g464770 47.525 101 52 1 5 105 7 106 6.29e-24 97.1
MsG0280009744.01.T03 MTR_6g090180 42.982 114 63 1 4 117 41 152 1.03e-23 97.1
MsG0280009744.01.T03 MTR_6g079770 50.000 102 45 2 5 104 12 109 1.27e-23 96.7
MsG0280009744.01.T03 MTR_7g016930 46.364 110 39 1 4 113 10 99 1.29e-23 95.5
MsG0280009744.01.T03 MTR_5g096900 52.083 96 40 3 5 99 7 97 1.37e-23 95.1
MsG0280009744.01.T03 MTR_3g011120 52.083 96 43 2 9 104 13 105 1.99e-23 95.5
MsG0280009744.01.T03 MTR_1g007450 47.321 112 55 3 1 112 3 110 5.19e-23 94.7
MsG0280009744.01.T03 MTR_8g033140 50.962 104 46 3 4 104 11 112 6.56e-23 94.4
MsG0280009744.01.T03 MTR_5g097330 45.946 111 58 2 4 113 10 119 6.57e-23 94.4
MsG0280009744.01.T03 MTR_6g070880 48.039 102 46 2 5 104 27 123 6.66e-23 92.4
MsG0280009744.01.T03 MTR_6g071420 48.039 102 46 2 5 104 27 123 6.66e-23 92.4
MsG0280009744.01.T03 MTR_0134s0060 48.113 106 49 3 4 107 6 107 1.33e-22 93.6
MsG0280009744.01.T03 MTR_2g066200 45.545 101 52 1 4 104 6 103 1.93e-22 92.8
MsG0280009744.01.T03 MTR_0129s0070 46.296 108 55 2 3 110 10 114 3.45e-22 92.4
MsG0280009744.01.T03 MTR_0129s0120 45.872 109 56 2 2 110 9 114 4.20e-22 92.0
MsG0280009744.01.T03 MTR_2g021770 40.580 138 64 3 4 125 6 141 4.92e-22 92.0
MsG0280009744.01.T03 MTR_1g098180 50.562 89 41 1 8 96 17 102 6.34e-22 91.3
MsG0280009744.01.T03 MTR_8g467670 51.546 97 44 2 9 105 13 106 6.50e-22 91.7
MsG0280009744.01.T03 MTR_6g086825 47.059 102 53 1 8 109 68 168 6.81e-22 92.0
MsG0280009744.01.T03 MTR_7g104710 48.039 102 46 2 4 103 11 107 1.91e-21 89.4
MsG0280009744.01.T03 MTR_2g104260 50.000 112 49 3 1 111 5 110 2.13e-21 88.6
MsG0280009744.01.T03 MTR_4g014370 44.262 122 60 5 3 120 15 132 2.53e-21 89.4
MsG0280009744.01.T03 MTR_5g097650 45.192 104 45 2 8 111 20 111 2.54e-21 85.9
MsG0280009744.01.T03 MTR_2g066170 42.308 104 57 1 4 107 6 106 4.51e-21 89.4
MsG0280009744.01.T03 MTR_2g021950 45.000 100 53 2 4 102 10 108 6.29e-21 89.0
MsG0280009744.01.T03 MTR_4g014370 44.262 122 60 5 3 120 4 121 6.41e-21 89.0
MsG0280009744.01.T03 MTR_6g461660 46.667 105 51 1 4 108 13 112 7.11e-21 88.6
MsG0280009744.01.T03 MTR_4g028680 38.760 129 69 3 1 124 4 127 8.86e-21 88.6
MsG0280009744.01.T03 MTR_8g032980 40.559 143 64 5 9 142 15 145 1.11e-20 88.2
MsG0280009744.01.T03 MTR_0831s0010 47.826 92 48 0 8 99 48 139 1.31e-20 88.2
MsG0280009744.01.T03 MTR_3g047580 56.250 64 28 0 8 71 12 75 1.42e-20 82.8
MsG0280009744.01.T03 MTR_8g041440 54.667 75 34 0 1 75 6 80 1.72e-20 82.4
MsG0280009744.01.T03 MTR_8g039500 40.385 104 53 1 4 107 6 100 1.91e-20 87.0
MsG0280009744.01.T03 MTR_2g021800 42.342 111 57 1 2 105 8 118 3.04e-20 87.0
MsG0280009744.01.T03 MTR_8g046220 45.455 99 51 1 9 107 16 111 3.98e-20 86.7
MsG0280009744.01.T03 MTR_5g097220 43.925 107 52 2 1 107 5 103 8.67e-20 85.9
MsG0280009744.01.T03 MTR_0054s0100 49.485 97 43 3 5 99 12 104 9.57e-20 85.5
MsG0280009744.01.T03 MTR_8g073570 44.348 115 57 4 1 113 1 110 9.63e-20 82.0
MsG0280009744.01.T03 MTR_0054s0090 49.485 97 43 3 5 99 12 104 1.51e-19 85.1
MsG0280009744.01.T03 MTR_2g066150 41.748 103 52 1 4 106 6 100 2.21e-19 84.3
MsG0280009744.01.T03 MTR_5g097680 44.762 105 57 1 4 108 11 114 2.23e-19 84.7
MsG0280009744.01.T03 MTR_2g065860 38.462 104 60 1 4 107 6 105 3.02e-19 84.0
MsG0280009744.01.T03 MTR_8g063330 45.361 97 52 1 9 104 13 109 6.92e-19 83.6
MsG0280009744.01.T03 MTR_3g019290 45.098 102 52 1 1 98 1 102 7.13e-19 79.7
MsG0280009744.01.T03 MTR_5g097350 49.074 108 48 1 2 102 8 115 8.25e-19 82.8
MsG0280009744.01.T03 MTR_8g064790 48.980 98 45 2 9 106 14 106 1.98e-18 81.3
MsG0280009744.01.T03 MTR_4g028750 35.000 140 78 4 1 135 4 135 2.34e-18 81.6
MsG0280009744.01.T03 MTR_2g034700 39.474 114 62 2 9 120 13 121 2.41e-18 81.6
MsG0280009744.01.T03 MTR_8g046310 43.434 99 53 1 8 106 14 109 2.61e-18 81.3
MsG0280009744.01.T03 MTR_4g028660 40.708 113 55 4 1 107 4 110 2.89e-18 81.3
MsG0280009744.01.T03 MTR_4g027450 40.708 113 55 4 1 107 4 110 2.89e-18 81.3
MsG0280009744.01.T03 MTR_8g033090 36.806 144 75 3 9 149 13 143 3.92e-18 81.3
MsG0280009744.01.T03 MTR_8g036970 46.226 106 45 3 18 117 6 105 5.45e-18 80.5
MsG0280009744.01.T03 MTR_6g080680 46.392 97 44 2 6 99 15 106 1.05e-17 79.7
MsG0280009744.01.T03 MTR_1g053510 43.689 103 56 2 4 105 8 109 1.52e-17 79.3
MsG0280009744.01.T03 MTR_6g079810 48.387 93 43 2 9 101 69 156 1.81e-17 79.3
MsG0280009744.01.T03 MTR_1g050308 43.434 99 53 1 4 102 28 123 4.40e-17 77.8
MsG0280009744.01.T03 MTR_8g033110 42.857 105 52 2 9 110 13 112 6.25e-17 77.8
MsG0280009744.01.T03 MTR_2g065840 37.037 108 64 1 4 111 6 109 8.68e-17 77.4
MsG0280009744.01.T03 MTR_4g028510 41.584 101 51 3 10 107 16 111 3.93e-16 75.5
MsG0280009744.01.T03 MTR_4g130330 40.625 96 50 2 9 104 6 94 1.29e-15 73.9
MsG0280009744.01.T03 MTR_6g478230 41.667 108 60 3 3 109 20 125 1.63e-15 73.6
MsG0280009744.01.T03 MTR_8g018110 43.434 99 48 2 9 104 13 106 1.99e-15 73.6
MsG0280009744.01.T03 MTR_8g046200 40.187 107 54 3 4 107 7 106 1.61e-14 70.9
MsG0280009744.01.T03 MTR_1g007430 43.333 90 48 2 17 106 3 89 8.16e-14 68.6
MsG0280009744.01.T03 MTR_8g064890 41.905 105 56 3 4 107 9 109 1.14e-13 68.2
MsG0280009744.01.T03 MTR_5g074850 43.000 100 48 3 4 101 29 121 1.27e-13 68.6
MsG0280009744.01.T03 MTR_5g096910 34.951 103 65 1 2 104 9 109 2.89e-13 67.4
MsG0280009744.01.T03 MTR_1g115205 41.414 99 39 3 10 108 29 108 6.46e-13 65.5
MsG0280009744.01.T03 MTR_5g092850 40.860 93 48 2 9 101 15 100 8.60e-13 65.9
MsG0280009744.01.T03 MTR_7g111700 39.450 109 46 3 2 107 7 98 8.62e-13 65.9
MsG0280009744.01.T03 MTR_5g094350 41.758 91 52 1 6 96 9 98 2.26e-12 63.9
MsG0280009744.01.T03 MTR_6g087660 50.794 63 29 1 9 69 17 79 2.49e-12 62.8
MsG0280009744.01.T03 MTR_5g075370 40.000 95 48 3 9 101 7 94 2.53e-12 64.7
MsG0280009744.01.T03 MTR_5g074800 54.386 57 23 1 49 105 1 54 3.19e-12 63.9
MsG0280009744.01.T03 MTR_5g086780 59.615 52 21 0 1 52 7 58 4.77e-12 62.8
MsG0280009744.01.T03 MTR_6g090260 54.902 51 23 0 9 59 19 69 1.79e-11 61.2
MsG0280009744.01.T03 MTR_5g096070 38.235 102 33 3 2 103 18 89 3.13e-11 59.3
MsG0280009744.01.T02 MTR_8g013000 80.374 107 11 1 1 97 1 107 2.78e-51 169
MsG0280009744.01.T02 MTR_2g064950 76.786 112 18 1 1 104 1 112 4.32e-51 168
MsG0280009744.01.T02 MTR_7g079640 73.077 104 18 2 1 95 5 107 2.67e-41 142
MsG0280009744.01.T02 MTR_5g072060 67.368 95 24 1 8 95 4 98 1.19e-36 133
MsG0280009744.01.T02 MTR_7g069550 58.716 109 33 1 1 97 5 113 3.36e-35 127
MsG0280009744.01.T02 MTR_4g055820 55.769 104 37 1 4 98 8 111 1.78e-30 114
MsG0280009744.01.T02 MTR_8g012090 57.732 97 40 1 2 97 8 104 8.27e-29 108
MsG0280009744.01.T02 MTR_5g097820 52.525 99 36 2 5 92 16 114 9.84e-28 104
MsG0280009744.01.T02 MTR_4g117550 50.000 114 46 3 1 103 8 121 2.64e-27 105
MsG0280009744.01.T02 MTR_5g069390 48.077 104 40 1 3 92 19 122 3.02e-27 106
MsG0280009744.01.T02 MTR_1g007410 53.846 104 38 1 1 94 13 116 3.97e-27 105
MsG0280009744.01.T02 MTR_5g037680 44.828 116 47 2 3 101 1 116 5.97e-27 105
MsG0280009744.01.T02 MTR_1g076810 52.632 95 37 1 5 91 13 107 6.82e-27 106
MsG0280009744.01.T02 MTR_8g041270 49.074 108 41 2 1 98 6 109 2.23e-26 103
MsG0280009744.01.T02 MTR_5g059430 46.847 111 40 2 1 92 17 127 3.94e-26 103
MsG0280009744.01.T02 MTR_6g465360 51.020 98 40 2 4 93 56 153 6.57e-26 100
MsG0280009744.01.T02 MTR_8g063440 49.524 105 45 1 4 100 6 110 8.04e-26 101
MsG0280009744.01.T02 MTR_7g016930 51.000 100 39 1 4 103 10 99 3.77e-25 99.4
MsG0280009744.01.T02 MTR_2g038680 49.515 103 41 1 5 96 11 113 1.12e-24 99.0
MsG0280009744.01.T02 MTR_7g017130 48.485 99 42 1 3 92 11 109 1.62e-24 98.2
MsG0280009744.01.T02 MTR_7g017170 48.485 99 42 1 3 92 11 109 1.76e-24 98.6
MsG0280009744.01.T02 MTR_0129s0050 49.057 106 40 2 1 96 5 106 2.23e-24 98.2
MsG0280009744.01.T02 MTR_4g102410 48.077 104 43 2 4 96 55 158 4.54e-24 97.4
MsG0280009744.01.T02 MTR_6g079770 52.041 98 39 2 5 94 12 109 5.01e-24 97.4
MsG0280009744.01.T02 MTR_7g017040 48.077 104 48 1 4 101 10 113 6.17e-24 96.7
MsG0280009744.01.T02 MTR_5g096630 56.122 98 33 2 4 91 12 109 1.01e-23 96.3
MsG0280009744.01.T02 MTR_8g032980 43.571 140 66 5 4 132 8 145 1.08e-23 96.3
MsG0280009744.01.T02 MTR_7g104710 51.546 97 40 2 4 93 11 107 1.10e-23 95.1
MsG0280009744.01.T02 MTR_5g096900 53.846 91 36 2 5 89 7 97 1.18e-23 95.1
MsG0280009744.01.T02 MTR_2g104280 50.000 106 40 2 5 101 9 110 1.20e-23 96.3
MsG0280009744.01.T02 MTR_2g104340 40.816 147 73 3 1 139 5 145 2.90e-23 95.1
MsG0280009744.01.T02 MTR_5g037190 44.037 109 52 1 2 101 8 116 3.54e-23 92.4
MsG0280009744.01.T02 MTR_5g024260 51.579 95 39 2 4 91 15 109 5.67e-23 94.4
MsG0280009744.01.T02 MTR_6g090180 42.857 112 56 1 4 107 41 152 6.38e-23 94.4
MsG0280009744.01.T02 MTR_0134s0060 49.020 102 44 2 4 97 6 107 7.21e-23 94.0
MsG0280009744.01.T02 MTR_0129s0120 46.729 107 48 2 2 100 9 114 7.21e-23 94.0
MsG0280009744.01.T02 MTR_1g007450 48.182 110 47 3 1 102 3 110 7.34e-23 94.0
MsG0280009744.01.T02 MTR_5g097650 51.724 87 40 1 8 94 20 104 8.71e-23 89.4
MsG0280009744.01.T02 MTR_0129s0070 47.170 106 47 2 3 100 10 114 1.00e-22 93.6
MsG0280009744.01.T02 MTR_5g091140 47.115 104 45 2 4 97 42 145 1.00e-22 93.6
MsG0280009744.01.T02 MTR_6g070880 48.454 97 43 2 5 94 27 123 1.28e-22 91.3
MsG0280009744.01.T02 MTR_6g071420 48.454 97 43 2 5 94 27 123 1.28e-22 91.3
MsG0280009744.01.T02 MTR_8g039500 44.211 95 52 1 4 97 6 100 1.58e-22 92.4
MsG0280009744.01.T02 MTR_2g022000 45.794 107 42 1 5 95 11 117 1.59e-22 93.2
MsG0280009744.01.T02 MTR_8g041440 50.549 91 35 1 1 91 6 86 3.07e-22 86.7
MsG0280009744.01.T02 MTR_8g464770 47.000 100 44 1 5 95 7 106 4.51e-22 91.7
MsG0280009744.01.T02 MTR_8g033140 48.039 102 42 2 4 94 11 112 5.07e-22 91.7
MsG0280009744.01.T02 MTR_5g097330 44.144 111 50 2 4 103 10 119 7.67e-22 91.3
MsG0280009744.01.T02 MTR_8g467670 50.000 94 40 1 9 95 13 106 9.53e-22 90.9
MsG0280009744.01.T02 MTR_3g047580 45.455 88 32 1 8 95 12 83 3.59e-21 84.0
MsG0280009744.01.T02 MTR_3g011120 50.538 93 39 2 9 94 13 105 4.00e-21 89.0
MsG0280009744.01.T02 MTR_6g086825 46.535 101 45 1 8 99 68 168 4.23e-21 89.4
MsG0280009744.01.T02 MTR_0831s0010 48.913 92 37 1 8 89 48 139 4.26e-21 89.4
MsG0280009744.01.T02 MTR_2g021770 38.971 136 59 2 4 115 6 141 5.15e-21 89.0
MsG0280009744.01.T02 MTR_2g066200 44.898 98 47 1 4 94 6 103 5.34e-21 88.6
MsG0280009744.01.T02 MTR_6g461660 47.000 100 48 1 4 98 13 112 5.56e-21 88.6
MsG0280009744.01.T02 MTR_2g066150 44.211 95 51 1 4 96 6 100 9.11e-21 87.8
MsG0280009744.01.T02 MTR_8g046220 47.917 96 43 1 9 97 16 111 1.86e-20 87.4
MsG0280009744.01.T02 MTR_1g098180 52.326 86 34 2 8 86 17 102 2.45e-20 86.7
MsG0280009744.01.T02 MTR_4g014370 43.333 120 54 4 3 110 15 132 2.98e-20 86.3
MsG0280009744.01.T02 MTR_2g021800 42.342 111 47 1 2 95 8 118 4.11e-20 86.3
MsG0280009744.01.T02 MTR_4g028680 38.710 124 66 3 1 114 4 127 4.47e-20 86.3
MsG0280009744.01.T02 MTR_4g014370 43.333 120 54 4 3 110 4 121 4.60e-20 86.3
MsG0280009744.01.T02 MTR_2g021950 44.444 99 45 2 4 92 10 108 6.74e-20 85.5
MsG0280009744.01.T02 MTR_5g097220 46.000 100 50 2 1 97 5 103 9.92e-20 85.1
MsG0280009744.01.T02 MTR_0054s0100 49.462 93 39 2 5 89 12 104 1.19e-19 85.1
MsG0280009744.01.T02 MTR_2g066170 41.584 101 52 1 4 97 6 106 1.59e-19 84.7
MsG0280009744.01.T02 MTR_0054s0090 49.462 93 39 2 5 89 12 104 1.64e-19 84.7
MsG0280009744.01.T02 MTR_8g064790 49.462 93 42 1 9 96 14 106 1.76e-19 84.0
MsG0280009744.01.T02 MTR_2g065860 40.000 100 54 1 4 97 6 105 4.63e-19 83.2
MsG0280009744.01.T02 MTR_2g034700 41.284 109 57 2 9 110 13 121 5.01e-19 83.2
MsG0280009744.01.T02 MTR_8g073570 43.363 113 51 4 1 103 1 110 6.51e-19 79.3
MsG0280009744.01.T02 MTR_5g097680 43.269 104 50 1 4 98 11 114 6.74e-19 83.2
MsG0280009744.01.T02 MTR_8g063330 45.361 97 42 1 9 94 13 109 9.56e-19 82.8
MsG0280009744.01.T02 MTR_4g028750 36.296 135 73 4 1 125 4 135 9.63e-19 82.4
MsG0280009744.01.T02 MTR_8g046310 47.917 96 43 2 8 96 14 109 1.13e-18 82.0
MsG0280009744.01.T02 MTR_5g097350 48.148 108 39 1 2 92 8 115 1.81e-18 81.6
MsG0280009744.01.T02 MTR_8g036970 47.000 100 43 2 18 107 6 105 2.43e-18 81.3
MsG0280009744.01.T02 MTR_2g104260 47.273 110 45 2 1 101 5 110 2.88e-18 79.7
MsG0280009744.01.T02 MTR_8g033090 36.691 139 72 2 9 139 13 143 3.10e-18 81.3
MsG0280009744.01.T02 MTR_4g028660 40.187 107 54 3 1 97 4 110 8.26e-18 79.7
MsG0280009744.01.T02 MTR_4g027450 40.187 107 54 3 1 97 4 110 8.26e-18 79.7
MsG0280009744.01.T02 MTR_6g080680 47.826 92 40 2 6 89 15 106 1.65e-17 79.0
MsG0280009744.01.T02 MTR_8g033110 43.000 100 49 1 9 100 13 112 1.68e-17 79.0
MsG0280009744.01.T02 MTR_3g019290 44.118 102 43 2 1 88 1 102 2.34e-17 75.5
MsG0280009744.01.T02 MTR_1g053510 44.660 103 45 3 4 95 8 109 2.93e-17 78.2
MsG0280009744.01.T02 MTR_6g079810 46.667 90 39 2 9 91 69 156 2.08e-16 75.9
MsG0280009744.01.T02 MTR_2g065840 37.500 104 59 1 4 101 6 109 3.33e-16 75.1
MsG0280009744.01.T02 MTR_1g050308 42.708 96 48 1 4 92 28 123 6.29e-16 74.3
MsG0280009744.01.T02 MTR_4g028510 41.667 96 48 3 10 97 16 111 1.50e-15 73.6
MsG0280009744.01.T02 MTR_8g018110 43.617 94 45 1 9 94 13 106 1.97e-15 73.2
MsG0280009744.01.T02 MTR_8g046200 41.121 107 47 3 2 97 5 106 2.43e-15 72.8
MsG0280009744.01.T02 MTR_6g478230 40.741 108 53 3 2 99 19 125 2.90e-15 72.8
MsG0280009744.01.T02 MTR_4g130330 41.758 91 46 2 9 94 6 94 7.06e-15 71.6
MsG0280009744.01.T02 MTR_5g074850 45.745 94 44 3 4 91 29 121 1.31e-14 71.2
MsG0280009744.01.T02 MTR_1g115205 46.667 90 37 4 10 98 29 108 3.58e-14 68.6
MsG0280009744.01.T02 MTR_5g096910 36.634 101 56 2 2 94 9 109 3.70e-14 69.3
MsG0280009744.01.T02 MTR_8g064890 44.086 93 45 2 4 89 9 101 5.78e-14 68.9
MsG0280009744.01.T02 MTR_1g007430 44.318 88 40 2 17 96 3 89 1.10e-13 67.8
MsG0280009744.01.T02 MTR_5g092850 43.678 87 44 2 9 91 15 100 1.16e-13 68.2
MsG0280009744.01.T02 MTR_7g111700 38.318 107 40 2 2 97 7 98 1.55e-13 67.4
MsG0280009744.01.T02 MTR_5g075370 42.697 89 44 3 9 91 7 94 2.98e-13 67.0
MsG0280009744.01.T02 MTR_5g096070 42.391 92 33 3 2 93 18 89 9.41e-13 63.2
MsG0280009744.01.T02 MTR_5g092860 41.463 82 46 1 28 107 20 101 2.80e-12 63.9
MsG0280009744.01.T02 MTR_6g087660 50.794 63 29 1 9 69 17 79 3.21e-12 62.4
MsG0280009744.01.T02 MTR_5g086780 59.615 52 21 0 1 52 7 58 3.68e-12 62.8
MsG0280009744.01.T02 MTR_5g094350 41.111 90 44 1 6 86 9 98 3.83e-12 63.2
MsG0280009744.01.T02 MTR_6g090260 54.902 51 23 0 9 59 19 69 1.24e-11 61.6
MsG0280009744.01.T02 MTR_5g074800 53.704 54 18 1 49 95 1 54 7.54e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 42 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATGTGTACACAAAATA+TGG 0.255127 2:-57449578 MsG0280009744.01.T01:CDS
CTTTGAGAATAGACTCAAAT+TGG 0.271520 2:-57449394 MsG0280009744.01.T01:CDS
AAACGCTTCAGAGATCTTAA+AGG 0.301957 2:+57449600 None:intergenic
TGGAGTCTGTGTCACCTTAT+TGG 0.312380 2:-57449216 MsG0280009744.01.T01:CDS
TTAAGATCTCTGAAGCGTTT+TGG 0.315323 2:-57449597 MsG0280009744.01.T01:CDS
GAACCCATAATATAAAAGAT+AGG 0.384284 2:+57449343 None:intergenic
CGAATTTCATCACCATGTTC+AGG 0.385680 2:-57449536 MsG0280009744.01.T01:CDS
CAAATCGAAGAGCTCCAATA+AGG 0.396040 2:+57449202 None:intergenic
GAGCTGACTATAAAATTATT+AGG 0.399659 2:-57449150 MsG0280009744.01.T01:CDS
ACTTGACAGTAAATGCAAAT+AGG 0.406750 2:+57449422 None:intergenic
ACATTGACTTCATCTCTTGT+CGG 0.409879 2:+57449256 None:intergenic
ATATGCTTTCGAATTCAAAC+TGG 0.422042 2:-57448985 MsG0280009744.01.T01:CDS
AAATGTACTGTTACCTCCAT+TGG 0.436430 2:+57449291 None:intergenic
CCTAGTGTGAGTGTGATCTT+TGG 0.436834 2:+57449446 None:intergenic
ATGGGTTCTAGCACTATTAA+CGG 0.445831 2:-57449328 MsG0280009744.01.T01:intron
AAAAGATCTTCTTCACGTAA+TGG 0.463237 2:+57449112 None:intergenic
TGTCATTCCTCCCAGTCCTA+TGG 0.470015 2:-57449236 MsG0280009744.01.T01:CDS
GAGTGATGTATCATCGTAGT+AGG 0.474898 2:+57449488 None:intergenic
TCTACCTAAAGATGCGCAAT+CGG 0.495467 2:-57449080 MsG0280009744.01.T01:CDS
ACCTCCATTGGAAAGGCAAA+GGG 0.500638 2:+57449303 None:intergenic
ACTTGCCAACTCCACTTCAC+AGG 0.501967 2:-57449371 MsG0280009744.01.T01:CDS
TGTGATCTTTGGAGACAAAC+TGG 0.510553 2:+57449457 None:intergenic
AACCCATAATATAAAAGATA+GGG 0.513869 2:+57449344 None:intergenic
ACTAATAATGCAAGATCTTG+AGG 0.515119 2:+57449636 None:intergenic
ATGCAAGATCTTGAGGTATG+TGG 0.527495 2:+57449643 None:intergenic
GGAACCCTTTGCCTTTCCAA+TGG 0.529170 2:-57449307 MsG0280009744.01.T01:intron
GTCCTCCTGTGAAGTGGAGT+TGG 0.530138 2:+57449366 None:intergenic
TGACACAGACTCCATAGGAC+TGG 0.530406 2:+57449225 None:intergenic
CCAAAGATCACACTCACACT+AGG 0.531554 2:-57449446 MsG0280009744.01.T01:CDS
ACCCTTTGCCTTTCCAATGG+AGG 0.534915 2:-57449304 MsG0280009744.01.T01:intron
GTAACAGTACATTTGTATTG+TGG 0.542612 2:-57449282 MsG0280009744.01.T01:intron
TACCTCCATTGGAAAGGCAA+AGG 0.542850 2:+57449302 None:intergenic
ATAGTCTAAGATGTAACACT+TGG 0.579951 2:-57449024 MsG0280009744.01.T01:CDS
GATAGGGTCCTCCTGTGAAG+TGG 0.583472 2:+57449360 None:intergenic
TACTGTTACCTCCATTGGAA+AGG 0.587054 2:+57449296 None:intergenic
TAAGGTGACACAGACTCCAT+AGG 0.598844 2:+57449220 None:intergenic
CTTTGGAGACAAACTGGTGT+AGG 0.600068 2:+57449463 None:intergenic
GACACAGACTCCATAGGACT+GGG 0.613261 2:+57449226 None:intergenic
TGCCAACTCCACTTCACAGG+AGG 0.614670 2:-57449368 MsG0280009744.01.T01:CDS
TAGTCTAAGATGTAACACTT+GGG 0.646114 2:-57449023 MsG0280009744.01.T01:CDS
TATAAAATTAGACCTGAACA+TGG 0.686332 2:+57449524 None:intergenic
ACAGACTCCATAGGACTGGG+AGG 0.718285 2:+57449229 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTTATGATAATGTA+TGG - Chr2:57449582-57449601 MsG0280009744.01.T01:CDS 10.0%
!!! AATATTTTATGATAATGTAT+GGG - Chr2:57449583-57449602 MsG0280009744.01.T01:CDS 10.0%
!! AACCCATAATATAAAAGATA+GGG + Chr2:57449295-57449314 None:intergenic 20.0%
! GAACCCATAATATAAAAGAT+AGG + Chr2:57449296-57449315 None:intergenic 25.0%
! GAGCTGACTATAAAATTATT+AGG - Chr2:57449486-57449505 MsG0280009744.01.T01:CDS 25.0%
! TATAAAATTAGACCTGAACA+TGG + Chr2:57449115-57449134 None:intergenic 25.0%
!! GACCCTATCTTTTATATTAT+GGG - Chr2:57449290-57449309 MsG0280009744.01.T01:intron 25.0%
AAAAGATCTTCTTCACGTAA+TGG + Chr2:57449527-57449546 None:intergenic 30.0%
ACTAATAATGCAAGATCTTG+AGG + Chr2:57449003-57449022 None:intergenic 30.0%
ACTTGACAGTAAATGCAAAT+AGG + Chr2:57449217-57449236 None:intergenic 30.0%
ATATGCTTTCGAATTCAAAC+TGG - Chr2:57449651-57449670 MsG0280009744.01.T01:CDS 30.0%
GTAACAGTACATTTGTATTG+TGG - Chr2:57449354-57449373 MsG0280009744.01.T01:CDS 30.0%
TTGGATGTGTACACAAAATA+TGG - Chr2:57449058-57449077 MsG0280009744.01.T01:CDS 30.0%
! ATAGTCTAAGATGTAACACT+TGG - Chr2:57449612-57449631 MsG0280009744.01.T01:CDS 30.0%
! CTTTGAGAATAGACTCAAAT+TGG - Chr2:57449242-57449261 MsG0280009744.01.T01:CDS 30.0%
! GGACCCTATCTTTTATATTA+TGG - Chr2:57449289-57449308 MsG0280009744.01.T01:intron 30.0%
! TAGTCTAAGATGTAACACTT+GGG - Chr2:57449613-57449632 MsG0280009744.01.T01:CDS 30.0%
!! TCGATTTGTTTTCATGGATT+TGG - Chr2:57449449-57449468 MsG0280009744.01.T01:CDS 30.0%
!! TTTTATAGTCAGCTCTAACA+CGG + Chr2:57449481-57449500 None:intergenic 30.0%
!!! GTGGTTTCTAACCTTTTTTA+CGG + Chr2:57448977-57448996 None:intergenic 30.0%
AAACGCTTCAGAGATCTTAA+AGG + Chr2:57449039-57449058 None:intergenic 35.0%
AAATGTACTGTTACCTCCAT+TGG + Chr2:57449348-57449367 None:intergenic 35.0%
! ATGGGTTCTAGCACTATTAA+CGG - Chr2:57449308-57449327 MsG0280009744.01.T01:intron 35.0%
!! ACATTGACTTCATCTCTTGT+CGG + Chr2:57449383-57449402 None:intergenic 35.0%
!! AGCTCTTCGATTTGTTTTCA+TGG - Chr2:57449443-57449462 MsG0280009744.01.T01:CDS 35.0%
!!! TTAAGATCTCTGAAGCGTTT+TGG - Chr2:57449039-57449058 MsG0280009744.01.T01:CDS 35.0%
ATGCAAGATCTTGAGGTATG+TGG + Chr2:57448996-57449015 None:intergenic 40.0%
CAAATCGAAGAGCTCCAATA+AGG + Chr2:57449437-57449456 None:intergenic 40.0%
CGAATTTCATCACCATGTTC+AGG - Chr2:57449100-57449119 MsG0280009744.01.T01:CDS 40.0%
GAGTGATGTATCATCGTAGT+AGG + Chr2:57449151-57449170 None:intergenic 40.0%
TACTGTTACCTCCATTGGAA+AGG + Chr2:57449343-57449362 None:intergenic 40.0%
TCTACCTAAAGATGCGCAAT+CGG - Chr2:57449556-57449575 MsG0280009744.01.T01:CDS 40.0%
! TGTGATCTTTGGAGACAAAC+TGG + Chr2:57449182-57449201 None:intergenic 40.0%
! TTTTCCGATTGCGCATCTTT+AGG + Chr2:57449563-57449582 None:intergenic 40.0%
ACCTCCATTGGAAAGGCAAA+GGG + Chr2:57449336-57449355 None:intergenic 45.0%
CCAAAGATCACACTCACACT+AGG - Chr2:57449190-57449209 MsG0280009744.01.T01:CDS 45.0%
CCTAGTGTGAGTGTGATCTT+TGG + Chr2:57449193-57449212 None:intergenic 45.0%
TAAGGTGACACAGACTCCAT+AGG + Chr2:57449419-57449438 None:intergenic 45.0%
TACCTCCATTGGAAAGGCAA+AGG + Chr2:57449337-57449356 None:intergenic 45.0%
TGGAGTCTGTGTCACCTTAT+TGG - Chr2:57449420-57449439 MsG0280009744.01.T01:CDS 45.0%
! CTTTGGAGACAAACTGGTGT+AGG + Chr2:57449176-57449195 None:intergenic 45.0%
ACCCTTTGCCTTTCCAATGG+AGG - Chr2:57449332-57449351 MsG0280009744.01.T01:intron 50.0%
ACTTGCCAACTCCACTTCAC+AGG - Chr2:57449265-57449284 MsG0280009744.01.T01:intron 50.0%
GACACAGACTCCATAGGACT+GGG + Chr2:57449413-57449432 None:intergenic 50.0%
GGAACCCTTTGCCTTTCCAA+TGG - Chr2:57449329-57449348 MsG0280009744.01.T01:intron 50.0%
TGACACAGACTCCATAGGAC+TGG + Chr2:57449414-57449433 None:intergenic 50.0%
TGTCATTCCTCCCAGTCCTA+TGG - Chr2:57449400-57449419 MsG0280009744.01.T01:CDS 50.0%
ACAGACTCCATAGGACTGGG+AGG + Chr2:57449410-57449429 None:intergenic 55.0%
GATAGGGTCCTCCTGTGAAG+TGG + Chr2:57449279-57449298 None:intergenic 55.0%
GTCCTCCTGTGAAGTGGAGT+TGG + Chr2:57449273-57449292 None:intergenic 55.0%
TGCCAACTCCACTTCACAGG+AGG - Chr2:57449268-57449287 MsG0280009744.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 57448970 57449688 57448970 ID=MsG0280009744.01;Name=MsG0280009744.01
Chr2 mRNA 57448970 57449688 57448970 ID=MsG0280009744.01.T01;Parent=MsG0280009744.01;Name=MsG0280009744.01.T01;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|0|0|2|0|221
Chr2 exon 57448970 57449281 57448970 ID=MsG0280009744.01.T01:exon:18741;Parent=MsG0280009744.01.T01
Chr2 exon 57449335 57449688 57449335 ID=MsG0280009744.01.T01:exon:18740;Parent=MsG0280009744.01.T01
Chr2 CDS 57449335 57449688 57449335 ID=MsG0280009744.01.T01:cds;Parent=MsG0280009744.01.T01
Chr2 CDS 57448970 57449281 57448970 ID=MsG0280009744.01.T01:cds;Parent=MsG0280009744.01.T01
Chr2 mRNA 57449143 57449688 57449143 ID=MsG0280009744.01.T02;Parent=MsG0280009744.01;Name=MsG0280009744.01.T02;_AED=0.30;_eAED=0.49;_QI=0|0|0|1|0|0|2|0|171
Chr2 exon 57449143 57449446 57449143 ID=MsG0280009744.01.T02:exon:18743;Parent=MsG0280009744.01.T02
Chr2 exon 57449477 57449688 57449477 ID=MsG0280009744.01.T02:exon:18742;Parent=MsG0280009744.01.T02
Chr2 CDS 57449477 57449688 57449477 ID=MsG0280009744.01.T02:cds;Parent=MsG0280009744.01.T02
Chr2 CDS 57449143 57449446 57449143 ID=MsG0280009744.01.T02:cds;Parent=MsG0280009744.01.T02
Chr2 mRNA 57449143 57449688 57449143 ID=MsG0280009744.01.T03;Parent=MsG0280009744.01;Name=MsG0280009744.01.T03;_AED=0.28;_eAED=0.47;_QI=0|-1|0|1|-1|0|1|0|181
Chr2 exon 57449143 57449688 57449143 ID=MsG0280009744.01.T03:exon:18744;Parent=MsG0280009744.01.T03
Chr2 CDS 57449143 57449688 57449143 ID=MsG0280009744.01.T03:cds;Parent=MsG0280009744.01.T03
Gene Sequence

>MsG0280009744.01.T01

ATGGCCGTAAAAAAGGTTAGAAACCACATACCTCAAGATCTTGCATTATTAGTTTTGTCGAAACTTCCTTTAAGATCTCTGAAGCGTTTTGGATGTGTACACAAAATATGGTCTCTCTTGTTTGAAAACTCGAATTTCATCACCATGTTCAGGTCTAATTTTATATCTATTTCTCACTCCTACTACGATGATACATCACTCATCCTACACCAGTTTGTCTCCAAAGATCACACTCACACTAGGTCCTATTTGCATTTACTGTCAAGTCGCAGCTTTGAGAATAGACTCAAATTGGACTTGCCAACTCCACTTCACAGGAGGACCCTATCTTTTATATTATGGGTTCTAGCACTAAATCCGACAAGAGATGAAGTCAATGTCATTCCTCCCAGTCCTATGGAGTCTGTGTCACCTTATTGGAGCTCTTCGATTTGTTTTCATGGATTTGGTTATGACCGTGTTAGAGCTGACTATAAAATTATTAGGCGTCTAGCTTATTTTCCATTACGTGAAGAAGATCTTTTTTATCTCAATCTACCTAAAGATGCGCAATCGGAAAAAATATTTTATGATAATGTATGGGAGATTTATAGTCTAAGATGTAACACTTGGGAAAAACTTGATGTCAATATGCTTTCGAATTCAAACTGGAGTGATCTATATTAA

>MsG0280009744.01.T03

ATGGCCGTAAAAAAGGTTAGAAACCACATACCTCAAGATCTTGCATTATTAGTTTTGTCGAAACTTCCTTTAAGATCTCTGAAGCGTTTTGGATGTGTACACAAAATATGGTCTCTCTTGTTTGAAAACTCGAATTTCATCACCATGTTCAGGTCTAATTTTATATCTATTTCTCACTCCTACTACGATGATACATCACTCATCCTACACCAGTTTGTCTCCAAAGATCACACTCACACTAGGTCCTATTTGCATTTACTGTCAAGTCGCAGCTTTGAGAATAGACTCAAATTGGACTTGCCAACTCCACTTCACAGGAGGACCCTATCTTTTATATTATGGGTTCTAGCACTATTAACGGAACCCTTTGCCTTTCCAATGGAGGTAACAGTACATTTGTATTGTGGAATCCGACAAGAGATGAAGTCAATGTCATTCCTCCCAGTCCTATGGAGTCTGTGTCACCTTATTGGAGCTCTTCGATTTGTTTTCATGGATTTGGTTATGACCGTGTTAGAGCTGACTATAAAATTATTAGGCGTCTAG

>MsG0280009744.01.T02

ATGGCCGTAAAAAAGGTTAGAAACCACATACCTCAAGATCTTGCATTATTAGTTTTGTCGAAACTTCCTTTAAGATCTCTGAAGCGTTTTGGATGTGTACACAAAATATGGTCTCTCTTGTTTGAAAACTCGAATTTCATCACCATGTTCAGGTCTAATTTTATATCTATTTCTCACTCCTACTACGATGATACATCACTCATCCTACACCAGTCCTATTTGCATTTACTGTCAAGTCGCAGCTTTGAGAATAGACTCAAATTGGACTTGCCAACTCCACTTCACAGGAGGACCCTATCTTTTATATTATGGGTTCTAGCACTATTAACGGAACCCTTTGCCTTTCCAATGGAGGTAACAGTACATTTGTATTGTGGAATCCGACAAGAGATGAAGTCAATGTCATTCCTCCCAGTCCTATGGAGTCTGTGTCACCTTATTGGAGCTCTTCGATTTGTTTTCATGGATTTGGTTATGACCGTGTTAGAGCTGACTATAAAATTATTAGGCGTCTAG
Protein sequence

>MsG0280009744.01.T01

MAVKKVRNHIPQDLALLVLSKLPLRSLKRFGCVHKIWSLLFENSNFITMFRSNFISISHSYYDDTSLILHQFVSKDHTHTRSYLHLLSSRSFENRLKLDLPTPLHRRTLSFILWVLALNPTRDEVNVIPPSPMESVSPYWSSSICFHGFGYDRVRADYKIIRRLAYFPLREEDLFYLNLPKDAQSEKIFYDNVWEIYSLRCNTWEKLDVNMLSNSNWSDLY*

>MsG0280009744.01.T03

MAVKKVRNHIPQDLALLVLSKLPLRSLKRFGCVHKIWSLLFENSNFITMFRSNFISISHSYYDDTSLILHQFVSKDHTHTRSYLHLLSSRSFENRLKLDLPTPLHRRTLSFILWVLALLTEPFAFPMEVTVHLYCGIRQEMKSMSFLPVLWSLCHLIGALRFVFMDLVMTVLELTIKLLGV*

>MsG0280009744.01.T02

MAVKKVRNHIPQDLALLVLSKLPLRSLKRFGCVHKIWSLLFENSNFITMFRSNFISISHSYYDDTSLILHQSYLHLLSSRSFENRLKLDLPTPLHRRTLSFILWVLALLTEPFAFPMEVTVHLYCGIRQEMKSMSFLPVLWSLCHLIGALRFVFMDLVMTVLELTIKLLGV*