AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012220.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012220.01.T01 MTR_5g092850 71.066 394 93 8 1 387 1 380 0.0 525
MsG0380012220.01.T01 MTR_5g092850 69.668 211 53 4 413 620 198 400 6.80e-87 277
MsG0380012220.01.T01 MTR_5g074850 61.779 416 134 9 15 421 34 433 5.52e-165 496
MsG0380012220.01.T01 MTR_5g074850 63.902 205 59 5 415 613 222 417 4.52e-73 253
MsG0380012220.01.T01 MTR_5g075370 64.230 383 114 9 14 384 6 377 6.95e-158 473
MsG0380012220.01.T01 MTR_5g075370 63.500 200 58 5 415 608 198 388 2.08e-70 243
MsG0380012220.01.T01 MTR_3g018750 87.773 229 24 2 165 393 1 225 2.45e-140 408
MsG0380012220.01.T01 MTR_3g018750 90.865 208 18 1 415 622 35 241 1.11e-132 389
MsG0380012220.01.T01 MTR_5g097220 45.669 381 187 11 16 385 13 384 6.60e-89 282
MsG0380012220.01.T01 MTR_5g097220 47.087 206 99 4 418 622 212 408 1.19e-45 167
MsG0380012220.01.T01 MTR_0054s0100 42.965 398 185 12 15 391 16 392 2.95e-85 273
MsG0380012220.01.T01 MTR_0054s0100 45.498 211 94 6 418 622 213 408 4.61e-44 162
MsG0380012220.01.T01 MTR_5g092860 46.049 367 162 12 34 391 20 359 1.98e-83 266
MsG0380012220.01.T01 MTR_5g092860 53.646 192 78 4 415 604 177 359 3.34e-53 186
MsG0380012220.01.T01 MTR_0054s0090 42.929 396 186 12 15 391 16 390 5.32e-83 266
MsG0380012220.01.T01 MTR_0054s0090 44.550 211 96 6 418 622 211 406 5.30e-42 157
MsG0380012220.01.T01 MTR_0129s0050 44.697 396 172 13 15 385 13 386 2.42e-80 259
MsG0380012220.01.T01 MTR_0129s0050 41.748 206 99 5 423 622 218 408 5.05e-36 140
MsG0380012220.01.T01 MTR_6g079810 42.574 404 186 13 6 385 60 441 6.08e-80 260
MsG0380012220.01.T01 MTR_6g079810 44.444 207 95 7 418 618 267 459 8.57e-39 149
MsG0380012220.01.T01 MTR_6g086825 41.935 403 185 17 8 386 62 439 5.95e-79 258
MsG0380012220.01.T01 MTR_6g086825 45.662 219 96 9 415 622 254 460 1.66e-44 165
MsG0380012220.01.T01 MTR_4g028510 42.278 395 183 13 11 385 11 380 4.18e-77 253
MsG0380012220.01.T01 MTR_4g028510 45.455 209 94 7 421 622 207 402 3.06e-42 159
MsG0380012220.01.T01 MTR_4g028680 40.561 392 192 9 11 385 11 378 8.80e-77 250
MsG0380012220.01.T01 MTR_4g028680 44.762 210 94 9 421 622 205 400 1.23e-38 147
MsG0380012220.01.T01 MTR_4g028750 40.561 392 188 11 12 385 12 376 9.91e-77 250
MsG0380012220.01.T01 MTR_4g028750 43.716 183 83 6 423 598 207 376 8.65e-36 139
MsG0380012220.01.T01 MTR_0134s0060 43.003 393 195 11 15 388 11 393 1.19e-76 250
MsG0380012220.01.T01 MTR_0134s0060 46.000 200 90 7 423 616 219 406 2.32e-39 149
MsG0380012220.01.T01 MTR_6g080680 40.617 389 180 9 15 385 18 373 1.33e-75 247
MsG0380012220.01.T01 MTR_6g080680 44.279 201 91 5 422 616 204 389 2.07e-39 149
MsG0380012220.01.T01 MTR_4g028660 40.769 390 193 10 11 385 11 377 1.18e-74 244
MsG0380012220.01.T01 MTR_4g028660 43.204 206 95 8 423 620 206 397 4.79e-36 140
MsG0380012220.01.T01 MTR_4g027450 40.769 390 193 10 11 385 11 377 1.18e-74 244
MsG0380012220.01.T01 MTR_4g027450 43.204 206 95 8 423 620 206 397 4.79e-36 140
MsG0380012220.01.T01 MTR_4g130330 40.617 389 195 10 12 386 3 369 1.11e-73 242
MsG0380012220.01.T01 MTR_4g130330 44.660 206 98 7 423 622 196 391 1.23e-37 144
MsG0380012220.01.T01 MTR_2g038680 40.816 392 191 13 16 385 16 388 1.77e-72 239
MsG0380012220.01.T01 MTR_2g038680 47.150 193 86 6 428 618 229 407 3.01e-42 157
MsG0380012220.01.T01 MTR_5g097330 41.058 397 177 13 15 385 15 380 3.19e-72 238
MsG0380012220.01.T01 MTR_5g097330 47.500 200 85 6 428 622 219 403 1.42e-40 153
MsG0380012220.01.T01 MTR_2g022000 40.704 398 192 14 15 385 15 395 3.51e-72 239
MsG0380012220.01.T01 MTR_2g022000 39.623 212 111 6 415 620 213 413 1.24e-34 137
MsG0380012220.01.T01 MTR_6g079770 42.532 395 192 13 15 387 16 397 7.21e-72 238
MsG0380012220.01.T01 MTR_6g079770 44.393 214 100 6 412 618 212 413 3.29e-40 152
MsG0380012220.01.T01 MTR_0129s0070 42.416 389 176 16 15 385 16 374 3.55e-71 235
MsG0380012220.01.T01 MTR_0129s0070 43.137 204 88 7 428 622 212 396 3.04e-36 140
MsG0380012220.01.T01 MTR_1g007450 39.604 404 186 14 16 397 12 379 1.31e-70 234
MsG0380012220.01.T01 MTR_1g007450 47.872 188 82 6 417 598 197 374 5.00e-38 146
MsG0380012220.01.T01 MTR_2g021950 39.086 394 188 14 14 385 14 377 1.43e-70 233
MsG0380012220.01.T01 MTR_2g021950 38.942 208 101 7 421 618 202 393 5.21e-33 131
MsG0380012220.01.T01 MTR_0129s0120 40.979 388 183 14 15 385 16 374 3.98e-70 233
MsG0380012220.01.T01 MTR_0129s0120 42.788 208 91 7 423 621 207 395 3.87e-36 140
MsG0380012220.01.T01 MTR_6g090180 40.000 400 182 14 15 385 46 416 5.32e-70 233
MsG0380012220.01.T01 MTR_6g090180 44.076 211 95 8 418 620 241 436 5.95e-40 152
MsG0380012220.01.T01 MTR_2g021800 39.599 399 196 14 15 385 15 396 6.61e-69 230
MsG0380012220.01.T01 MTR_2g021800 40.654 214 110 5 415 622 214 416 2.03e-38 147
MsG0380012220.01.T01 MTR_2g021770 38.363 391 197 13 16 382 12 382 7.10e-69 229
MsG0380012220.01.T01 MTR_2g021770 37.019 208 109 7 423 622 214 407 7.20e-31 125
MsG0380012220.01.T01 MTR_3g011120 40.712 393 172 15 11 385 9 358 2.85e-68 227
MsG0380012220.01.T01 MTR_3g011120 43.503 177 76 5 427 598 201 358 2.71e-30 123
MsG0380012220.01.T01 MTR_5g097680 41.889 413 181 17 13 385 14 407 6.40e-68 228
MsG0380012220.01.T01 MTR_5g097680 43.269 208 98 6 422 622 233 427 1.74e-33 133
MsG0380012220.01.T01 MTR_8g063440 39.594 394 190 15 6 385 2 361 1.06e-67 226
MsG0380012220.01.T01 MTR_8g063440 40.094 212 104 8 416 622 190 383 2.77e-35 137
MsG0380012220.01.T01 MTR_1g007410 41.565 409 188 17 1 385 3 384 1.30e-67 226
MsG0380012220.01.T01 MTR_1g007410 38.095 210 103 8 399 598 192 384 5.75e-25 108
MsG0380012220.01.T01 MTR_4g055820 42.234 367 168 12 15 360 13 356 1.33e-66 222
MsG0380012220.01.T01 MTR_4g055820 43.827 162 66 5 423 573 209 356 5.33e-28 116
MsG0380012220.01.T01 MTR_6g478230 39.078 412 171 16 12 389 23 388 5.05e-66 222
MsG0380012220.01.T01 MTR_6g478230 43.541 209 90 9 432 622 209 407 4.13e-36 140
MsG0380012220.01.T01 MTR_0831s0010 36.294 394 197 12 10 386 44 400 2.89e-64 218
MsG0380012220.01.T01 MTR_0831s0010 38.049 205 100 5 425 621 235 420 1.66e-32 130
MsG0380012220.01.T01 MTR_2g034700 39.241 395 171 16 11 385 9 354 3.26e-64 216
MsG0380012220.01.T01 MTR_2g034700 39.594 197 97 8 426 620 198 374 2.69e-30 123
MsG0380012220.01.T01 MTR_6g461660 39.303 402 178 13 15 388 18 381 1.23e-63 215
MsG0380012220.01.T01 MTR_6g461660 41.429 210 97 7 419 622 211 400 1.24e-32 130
MsG0380012220.01.T01 MTR_5g097350 39.633 381 171 13 25 385 25 366 1.79e-63 214
MsG0380012220.01.T01 MTR_5g097350 44.845 194 87 5 428 620 211 385 9.42e-35 136
MsG0380012220.01.T01 MTR_7g017170 38.875 391 187 14 16 386 18 376 4.56e-63 214
MsG0380012220.01.T01 MTR_7g017170 35.000 220 114 7 419 622 203 409 1.22e-27 115
MsG0380012220.01.T01 MTR_7g069550 38.384 396 181 17 16 382 14 375 6.75e-63 213
MsG0380012220.01.T01 MTR_7g069550 44.681 188 73 9 420 595 207 375 1.16e-30 124
MsG0380012220.01.T01 MTR_8g046310 37.500 392 182 12 11 385 11 356 6.88e-63 213
MsG0380012220.01.T01 MTR_8g046310 35.678 199 108 6 425 620 195 376 1.57e-25 109
MsG0380012220.01.T01 MTR_7g017130 38.974 390 186 14 16 385 18 375 7.90e-63 213
MsG0380012220.01.T01 MTR_7g017130 36.190 210 113 6 419 622 203 397 5.99e-28 116
MsG0380012220.01.T01 MTR_5g096910 38.889 414 177 13 11 394 12 379 1.63e-62 212
MsG0380012220.01.T01 MTR_5g096910 42.929 198 93 5 427 621 212 392 9.71e-38 144
MsG0380012220.01.T01 MTR_8g012090 37.688 398 162 10 1 376 1 334 2.75e-62 209
MsG0380012220.01.T01 MTR_8g012090 40.571 175 81 4 422 589 176 334 2.11e-28 116
MsG0380012220.01.T01 MTR_4g102410 38.987 395 191 14 15 385 60 428 5.88e-62 212
MsG0380012220.01.T01 MTR_4g102410 40.845 213 104 11 416 619 248 447 1.68e-30 125
MsG0380012220.01.T01 MTR_2g104340 39.031 392 189 14 15 385 13 375 7.05e-62 211
MsG0380012220.01.T01 MTR_2g104340 41.981 212 94 7 423 622 202 396 5.39e-34 134
MsG0380012220.01.T01 MTR_8g464770 38.303 389 181 14 15 385 11 358 1.91e-61 209
MsG0380012220.01.T01 MTR_8g464770 38.776 196 97 7 425 616 198 374 1.89e-27 114
MsG0380012220.01.T01 MTR_5g037680 38.084 407 171 15 12 384 4 363 5.12e-61 210
MsG0380012220.01.T01 MTR_5g037680 40.331 181 82 6 428 597 198 363 8.58e-29 120
MsG0380012220.01.T01 MTR_5g096630 37.811 402 187 15 18 385 20 392 5.26e-61 209
MsG0380012220.01.T01 MTR_5g096630 39.269 219 110 9 417 622 206 414 9.16e-30 122
MsG0380012220.01.T01 MTR_1g053510 36.919 409 190 13 11 385 10 384 7.80e-60 206
MsG0380012220.01.T01 MTR_1g053510 36.816 201 101 7 422 617 222 401 6.73e-25 107
MsG0380012220.01.T01 MTR_7g079640 37.659 393 173 12 15 385 12 354 1.71e-59 204
MsG0380012220.01.T01 MTR_7g079640 39.459 185 80 6 428 598 188 354 1.07e-24 107
MsG0380012220.01.T01 MTR_8g033140 33.486 436 216 13 1 394 1 404 2.57e-59 204
MsG0380012220.01.T01 MTR_8g033140 36.946 203 100 6 425 622 239 418 6.01e-25 108
MsG0380012220.01.T01 MTR_8g467670 37.565 386 185 14 15 385 13 357 2.60e-59 204
MsG0380012220.01.T01 MTR_8g467670 31.802 283 160 9 352 622 118 379 7.67e-29 119
MsG0380012220.01.T01 MTR_4g014370 36.634 404 201 12 15 387 10 389 1.83e-58 202
MsG0380012220.01.T01 MTR_4g014370 36.946 203 117 4 420 622 218 409 8.30e-29 119
MsG0380012220.01.T01 MTR_8g041270 38.847 399 189 16 15 385 14 385 2.74e-58 201
MsG0380012220.01.T01 MTR_8g041270 39.130 230 102 9 413 622 195 406 3.96e-31 126
MsG0380012220.01.T01 MTR_5g059430 35.461 423 175 16 12 381 22 399 1.35e-57 200
MsG0380012220.01.T01 MTR_5g059430 36.098 205 101 8 428 619 236 423 2.57e-26 112
MsG0380012220.01.T01 MTR_8g064890 38.243 387 196 14 11 385 11 366 3.76e-57 197
MsG0380012220.01.T01 MTR_8g064890 40.306 196 100 5 427 622 210 388 1.42e-30 124
MsG0380012220.01.T01 MTR_5g069390 37.500 408 185 17 12 384 22 394 5.72e-57 200
MsG0380012220.01.T01 MTR_5g069390 36.098 205 107 7 427 622 228 417 4.49e-27 115
MsG0380012220.01.T01 MTR_2g104280 36.500 400 205 13 8 382 6 381 1.67e-56 196
MsG0380012220.01.T01 MTR_2g104280 37.264 212 104 8 423 622 211 405 8.10e-28 116
MsG0380012220.01.T01 MTR_1g098180 36.456 395 175 14 10 388 13 347 2.51e-56 195
MsG0380012220.01.T01 MTR_1g098180 34.483 203 95 7 425 616 185 360 1.48e-23 103
MsG0380012220.01.T01 MTR_4g117550 37.662 385 177 16 15 385 16 351 7.40e-56 194
MsG0380012220.01.T01 MTR_4g117550 38.974 195 84 8 428 622 214 373 2.77e-26 111
MsG0380012220.01.T01 MTR_6g090250 36.409 401 208 13 34 401 29 415 9.46e-56 195
MsG0380012220.01.T01 MTR_6g090250 40.196 204 104 6 426 620 228 422 5.18e-30 123
MsG0380012220.01.T01 MTR_8g033090 34.615 416 199 13 10 385 8 390 1.88e-55 194
MsG0380012220.01.T01 MTR_8g033090 36.150 213 96 6 426 622 224 412 1.41e-26 112
MsG0380012220.01.T01 MTR_5g072060 35.961 406 192 14 15 399 5 363 9.91e-55 197
MsG0380012220.01.T01 MTR_5g072060 41.667 144 64 4 462 595 214 347 3.50e-18 89.0
MsG0380012220.01.T01 MTR_7g017040 36.111 396 192 12 15 384 15 375 2.65e-54 190
MsG0380012220.01.T01 MTR_7g017040 39.726 219 101 10 418 622 197 398 1.73e-27 115
MsG0380012220.01.T01 MTR_5g024260 35.941 409 189 17 11 386 17 385 9.94e-54 189
MsG0380012220.01.T01 MTR_5g024260 36.269 193 88 9 426 599 209 385 1.08e-17 86.3
MsG0380012220.01.T01 MTR_8g033110 34.360 422 203 14 6 385 4 393 1.07e-53 189
MsG0380012220.01.T01 MTR_8g033110 36.620 213 98 8 426 622 224 415 2.90e-24 106
MsG0380012220.01.T01 MTR_2g066200 36.061 391 195 17 15 385 11 366 3.98e-53 187
MsG0380012220.01.T01 MTR_2g066200 37.129 202 109 7 426 621 198 387 2.05e-26 112
MsG0380012220.01.T01 MTR_2g065860 35.190 395 195 14 15 386 11 367 9.31e-53 186
MsG0380012220.01.T01 MTR_2g065860 37.745 204 103 7 426 622 202 388 1.43e-25 109
MsG0380012220.01.T01 MTR_8g046200 33.971 418 201 11 12 384 12 399 1.94e-52 186
MsG0380012220.01.T01 MTR_8g046200 34.123 211 115 7 415 620 229 420 3.47e-23 102
MsG0380012220.01.T01 MTR_5g043605 35.677 384 149 12 13 385 22 318 2.01e-52 184
MsG0380012220.01.T01 MTR_5g043605 41.262 206 103 6 422 622 147 339 1.40e-35 138
MsG0380012220.01.T01 MTR_8g039500 38.830 376 176 19 15 376 11 346 4.96e-52 182
MsG0380012220.01.T01 MTR_8g039500 39.412 170 81 8 428 589 191 346 4.98e-18 86.3
MsG0380012220.01.T01 MTR_2g066170 35.733 389 197 16 15 385 11 364 7.30e-52 183
MsG0380012220.01.T01 MTR_2g066170 37.624 202 106 8 426 621 198 385 6.94e-26 110
MsG0380012220.01.T01 MTR_2g064950 36.340 388 203 14 15 385 9 369 1.84e-51 182
MsG0380012220.01.T01 MTR_2g064950 40.223 179 89 7 428 598 201 369 2.35e-25 108
MsG0380012220.01.T01 MTR_6g078010 36.338 355 164 12 50 385 2 313 1.17e-50 179
MsG0380012220.01.T01 MTR_6g078010 43.842 203 94 7 422 617 141 330 5.04e-36 139
MsG0380012220.01.T01 MTR_5g091140 37.084 391 184 16 15 385 47 395 2.23e-50 180
MsG0380012220.01.T01 MTR_5g091140 41.451 193 95 7 415 598 212 395 3.19e-29 120
MsG0380012220.01.T01 MTR_5g064700 40.867 323 152 13 88 385 40 348 3.09e-50 178
MsG0380012220.01.T01 MTR_5g064700 42.788 208 101 5 422 622 172 368 8.45e-37 141
MsG0380012220.01.T01 MTR_8g013000 33.182 440 217 19 15 414 9 411 3.94e-50 179
MsG0380012220.01.T01 MTR_8g013000 39.744 156 69 5 428 575 212 350 3.81e-19 90.5
MsG0380012220.01.T01 MTR_2g066150 34.987 383 182 14 15 385 11 338 7.33e-50 177
MsG0380012220.01.T01 MTR_2g066150 38.220 191 95 9 439 622 186 360 1.27e-20 94.4
MsG0380012220.01.T01 MTR_6g079790 37.874 301 152 10 100 386 9 288 2.83e-49 174
MsG0380012220.01.T01 MTR_6g079790 40.708 226 106 8 408 622 101 309 3.33e-38 144
MsG0380012220.01.T01 MTR_8g046220 34.837 399 196 12 12 379 13 378 3.94e-49 176
MsG0380012220.01.T01 MTR_8g046220 35.821 201 104 6 425 620 224 404 2.81e-24 105
MsG0380012220.01.T01 MTR_2g065840 34.171 398 196 16 15 387 11 367 5.54e-49 176
MsG0380012220.01.T01 MTR_2g065840 38.308 201 104 7 426 621 203 388 1.60e-28 118
MsG0380012220.01.T01 MTR_5g094350 41.892 296 124 12 13 293 10 272 6.34e-49 172
MsG0380012220.01.T01 MTR_5g094350 45.238 84 38 3 422 505 197 272 1.90e-13 71.6
MsG0380012220.01.T01 MTR_7g104710 37.730 326 133 9 13 321 14 286 1.77e-48 172
MsG0380012220.01.T01 MTR_7g104710 45.161 124 55 3 418 533 168 286 1.12e-21 96.7
MsG0380012220.01.T01 MTR_1g050312 38.006 321 128 11 78 385 11 273 2.16e-48 171
MsG0380012220.01.T01 MTR_1g050312 37.681 207 84 8 419 614 115 287 9.17e-24 102
MsG0380012220.01.T01 MTR_5g074800 36.676 349 171 14 55 382 1 320 8.53e-48 171
MsG0380012220.01.T01 MTR_5g074800 39.151 212 97 8 414 614 146 336 1.40e-29 120
MsG0380012220.01.T01 MTR_7g111700 35.088 399 163 12 15 385 14 344 1.14e-47 171
MsG0380012220.01.T01 MTR_7g111700 41.791 201 90 6 427 622 187 365 1.05e-29 121
MsG0380012220.01.T01 MTR_4g007940 34.195 348 163 14 69 385 8 320 4.02e-47 169
MsG0380012220.01.T01 MTR_4g007940 39.062 192 81 6 425 598 147 320 1.97e-31 125
MsG0380012220.01.T01 MTR_8g032980 32.401 429 210 12 1 382 1 396 1.01e-46 170
MsG0380012220.01.T01 MTR_8g032980 34.562 217 99 7 427 622 227 421 2.63e-22 100
MsG0380012220.01.T01 MTR_8g018110 34.236 406 199 14 10 385 8 375 2.02e-46 169
MsG0380012220.01.T01 MTR_8g018110 35.644 202 96 9 426 622 225 397 2.11e-19 91.3
MsG0380012220.01.T01 MTR_1g050308 34.555 382 151 12 15 384 33 327 2.22e-46 167
MsG0380012220.01.T01 MTR_1g007430 37.465 355 161 14 26 360 6 319 4.63e-46 166
MsG0380012220.01.T01 MTR_1g007430 40.260 154 62 4 426 573 190 319 1.02e-19 91.3
MsG0380012220.01.T01 MTR_5g096900 38.028 355 134 15 13 330 9 314 1.08e-45 165
MsG0380012220.01.T01 MTR_5g096900 39.844 128 55 4 423 542 201 314 3.03e-15 77.8
MsG0380012220.01.T01 MTR_7g023800 36.236 356 141 13 55 388 1 292 1.10e-45 164
MsG0380012220.01.T01 MTR_7g023800 45.304 181 78 7 439 613 137 302 1.53e-34 133
MsG0380012220.01.T01 MTR_8g064790 33.419 389 172 10 11 390 10 320 5.06e-45 163
MsG0380012220.01.T01 MTR_8g064790 39.506 162 86 4 462 622 187 337 6.14e-23 100
MsG0380012220.01.T01 MTR_5g022850 34.127 378 176 12 15 382 15 329 3.96e-44 161
MsG0380012220.01.T01 MTR_5g022850 38.235 204 113 5 420 622 162 353 1.30e-27 114
MsG0380012220.01.T01 MTR_6g087620 36.991 319 135 12 84 388 2 268 4.21e-44 159
MsG0380012220.01.T01 MTR_6g087620 45.361 194 86 7 428 612 97 279 3.09e-37 140
MsG0380012220.01.T01 MTR_7g016930 35.988 339 152 11 15 337 15 304 8.82e-44 160
MsG0380012220.01.T01 MTR_7g016930 37.415 147 72 4 410 549 171 304 2.87e-15 77.8
MsG0380012220.01.T01 MTR_5g076490 37.888 322 146 12 84 388 32 316 3.83e-41 152
MsG0380012220.01.T01 MTR_5g076490 41.860 215 100 7 419 622 136 336 1.51e-30 123
MsG0380012220.01.T01 MTR_2g021920 40.789 228 115 7 167 385 37 253 1.29e-40 149
MsG0380012220.01.T01 MTR_2g021920 39.336 211 98 7 420 618 77 269 7.68e-35 133
MsG0380012220.01.T01 MTR_8g063370 32.468 385 201 16 20 385 28 372 1.75e-40 152
MsG0380012220.01.T01 MTR_8g063370 34.171 199 112 8 427 620 208 392 2.56e-19 90.9
MsG0380012220.01.T01 MTR_8g063330 32.383 386 199 15 1 362 1 348 2.85e-40 154
MsG0380012220.01.T01 MTR_8g063330 34.568 162 74 6 426 575 207 348 1.89e-17 85.9
MsG0380012220.01.T01 MTR_8g063350 31.646 395 171 18 12 385 10 326 1.05e-38 146
MsG0380012220.01.T01 MTR_8g063350 36.649 191 104 8 427 612 158 336 4.71e-23 101
MsG0380012220.01.T01 MTR_6g004450 39.004 241 123 7 147 385 29 247 1.34e-38 144
MsG0380012220.01.T01 MTR_6g004450 42.714 199 97 6 423 619 83 266 2.49e-35 134
MsG0380012220.01.T01 MTR_6g070880 37.805 246 128 8 7 236 23 259 1.02e-36 138
MsG0380012220.01.T01 MTR_6g071420 37.805 246 128 8 7 236 23 259 1.02e-36 138
MsG0380012220.01.T01 MTR_5g068490 35.273 275 123 9 115 385 33 256 1.97e-36 138
MsG0380012220.01.T01 MTR_5g068490 39.320 206 99 8 422 622 93 277 1.41e-29 118
MsG0380012220.01.T01 MTR_5g023970 40.976 205 102 5 423 622 6 196 3.21e-36 134
MsG0380012220.01.T01 MTR_5g023970 42.778 180 86 4 211 385 6 173 2.96e-34 129
MsG0380012220.01.T01 MTR_5g086590 37.066 259 112 10 129 379 16 231 1.40e-35 134
MsG0380012220.01.T01 MTR_5g086590 40.698 172 79 4 427 592 77 231 5.32e-30 119
MsG0380012220.01.T01 MTR_6g090260 41.791 201 100 7 426 620 73 262 1.44e-35 135
MsG0380012220.01.T01 MTR_6g090260 44.318 176 82 6 214 383 73 238 3.74e-32 125
MsG0380012220.01.T01 MTR_6g090260 56.364 55 24 0 7 61 11 65 4.18e-11 64.3
MsG0380012220.01.T01 MTR_5g097820 34.944 269 125 9 10 259 17 254 1.69e-33 129
MsG0380012220.01.T01 MTR_6g009350 39.713 209 98 8 168 370 9 195 7.07e-32 122
MsG0380012220.01.T01 MTR_6g009350 42.012 169 81 6 420 583 39 195 9.66e-30 116
MsG0380012220.01.T01 MTR_6g465360 41.176 221 108 8 15 218 61 276 1.09e-31 125
MsG0380012220.01.T01 MTR_1g115205 38.618 246 109 9 16 258 29 235 3.22e-30 119
MsG0380012220.01.T01 MTR_4g014370 36.946 203 117 4 420 622 146 337 2.45e-29 119
MsG0380012220.01.T01 MTR_4g014370 37.222 180 105 3 208 387 146 317 1.02e-25 108
MsG0380012220.01.T01 MTR_4g014370 43.220 118 55 5 15 121 21 137 5.56e-14 73.9
MsG0380012220.01.T01 MTR_2g104260 34.386 285 150 9 16 286 14 275 5.13e-29 117
MsG0380012220.01.T01 MTR_5g098950 35.865 237 97 7 127 362 89 271 1.14e-28 115
MsG0380012220.01.T01 MTR_5g098950 36.601 153 61 5 423 575 155 271 2.06e-14 74.3
MsG0380012220.01.T01 MTR_8g035690 33.962 265 132 9 145 385 36 281 2.16e-28 115
MsG0380012220.01.T01 MTR_8g035690 37.755 196 96 6 426 616 123 297 9.72e-25 105
MsG0380012220.01.T01 MTR_8g073570 40.805 174 83 7 14 178 8 170 3.82e-28 111
MsG0380012220.01.T01 MTR_5g097850 37.931 203 91 6 433 621 63 244 5.79e-28 113
MsG0380012220.01.T01 MTR_5g097850 38.202 178 79 5 221 384 63 223 2.55e-25 105
MsG0380012220.01.T01 MTR_1g076810 35.656 244 115 10 7 234 10 227 6.14e-28 119
MsG0380012220.01.T01 MTR_5g037190 33.929 280 127 10 16 282 16 250 3.76e-27 110
MsG0380012220.01.T01 MTR_7g017120 37.838 222 101 10 416 622 67 266 1.03e-26 110
MsG0380012220.01.T01 MTR_7g017120 37.766 188 88 8 204 375 67 241 8.98e-24 101
MsG0380012220.01.T01 MTR_8g063310 28.607 402 217 18 15 387 21 381 1.06e-26 113
MsG0380012220.01.T01 MTR_8g063310 27.572 243 149 9 386 614 160 389 1.33e-12 70.5
MsG0380012220.01.T01 MTR_8g036970 41.071 168 83 4 427 594 146 297 1.31e-26 112
MsG0380012220.01.T01 MTR_8g036970 40.237 169 82 5 215 381 146 297 1.40e-25 109
MsG0380012220.01.T01 MTR_8g036970 39.041 146 70 6 20 149 2 144 2.12e-17 84.7
MsG0380012220.01.T01 MTR_7g017150 38.117 223 100 10 416 622 67 267 1.48e-26 109
MsG0380012220.01.T01 MTR_7g017150 37.912 182 86 7 208 375 74 242 6.38e-24 102
MsG0380012220.01.T01 MTR_8g033000 29.765 383 185 14 53 389 1 345 1.99e-26 111
MsG0380012220.01.T01 MTR_8g033000 36.667 210 98 6 427 622 175 363 1.05e-25 109
MsG0380012220.01.T01 MTR_5g096920 41.727 139 67 4 252 385 1 130 7.59e-26 104
MsG0380012220.01.T01 MTR_5g096920 40.252 159 80 5 464 618 1 148 1.06e-25 103
MsG0380012220.01.T01 MTR_5g066420 40.559 143 70 5 464 597 1 137 1.27e-24 100
MsG0380012220.01.T01 MTR_5g066420 40.845 142 70 5 252 384 1 137 1.63e-24 100
MsG0380012220.01.T01 MTR_5g097540 39.490 157 72 6 211 362 92 230 5.08e-24 103
MsG0380012220.01.T01 MTR_5g097540 39.490 157 73 5 423 575 92 230 5.33e-24 103
MsG0380012220.01.T01 MTR_4g016000 34.061 229 103 9 131 354 2 187 6.92e-24 100
MsG0380012220.01.T01 MTR_4g016000 39.860 143 64 5 426 568 68 188 4.35e-19 86.7
MsG0380012220.01.T01 MTR_7g101200 34.146 246 106 12 121 362 33 226 1.10e-23 100
MsG0380012220.01.T01 MTR_7g101200 32.075 212 119 8 367 575 37 226 2.44e-19 88.2
MsG0380012220.01.T01 MTR_5g097650 44.138 145 65 7 7 143 13 149 2.73e-22 94.4
MsG0380012220.01.T01 MTR_4g133170 25.135 370 224 14 19 379 7 332 1.03e-21 98.2
MsG0380012220.01.T01 MTR_6g079730 42.857 140 70 5 487 620 13 148 2.23e-21 91.3
MsG0380012220.01.T01 MTR_6g079730 46.957 115 54 3 275 383 13 126 2.38e-21 91.3
MsG0380012220.01.T01 MTR_5g091150 33.491 212 68 7 108 312 39 184 3.61e-20 89.4
MsG0380012220.01.T01 MTR_5g091150 42.157 102 38 3 428 524 99 184 2.14e-14 72.8
MsG0380012220.01.T01 MTR_2g028140 26.344 372 213 14 24 371 13 347 3.77e-20 93.6
MsG0380012220.01.T01 MTR_7g019250 30.435 253 123 8 140 384 206 413 5.56e-20 93.6
MsG0380012220.01.T01 MTR_7g019250 33.149 181 83 5 425 597 263 413 2.05e-16 82.8
MsG0380012220.01.T01 MTR_3g030620 36.145 166 87 5 461 616 20 176 1.05e-19 87.4
MsG0380012220.01.T01 MTR_3g030620 36.667 150 72 5 249 385 20 159 5.42e-18 82.4
MsG0380012220.01.T01 MTR_2g046900 25.066 379 229 13 15 379 27 364 1.46e-19 91.7
MsG0380012220.01.T01 MTR_1g068835 25.135 370 216 14 24 379 12 334 1.75e-19 91.3
MsG0380012220.01.T01 MTR_2g021150 26.893 383 216 16 7 373 5 339 2.30e-19 90.9
MsG0380012220.01.T01 MTR_8g101580 27.151 372 202 16 24 379 54 372 3.49e-19 90.5
MsG0380012220.01.T01 MTR_2g426070 24.352 386 219 16 24 379 14 356 3.07e-18 87.8
MsG0380012220.01.T01 MTR_3g014540 26.064 376 206 16 16 375 29 348 5.22e-18 86.7
MsG0380012220.01.T01 MTR_3g014570 25.067 375 216 13 18 380 31 352 2.24e-17 84.7
MsG0380012220.01.T01 MTR_3g007360 26.503 366 191 18 24 371 60 365 3.43e-17 84.7
MsG0380012220.01.T01 MTR_3g007410 26.243 362 197 17 24 371 60 365 4.01e-17 84.3
MsG0380012220.01.T01 MTR_2g426090 24.147 381 223 16 24 379 14 353 6.33e-17 84.0
MsG0380012220.01.T01 MTR_2g028130 24.011 379 217 12 19 371 8 341 9.33e-17 83.2
MsG0380012220.01.T01 MTR_4g061340 26.269 335 187 15 19 341 29 315 1.22e-16 82.4
MsG0380012220.01.T01 MTR_2g026010 26.099 364 210 15 35 382 23 343 1.24e-16 82.8
MsG0380012220.01.T01 MTR_0667s0010 24.808 391 211 19 24 379 14 356 1.25e-16 82.8
MsG0380012220.01.T01 MTR_3g036335 23.575 386 205 16 19 380 44 363 1.26e-16 82.8
MsG0380012220.01.T01 MTR_0044s0300 24.731 372 211 16 19 379 41 354 1.30e-16 82.8
MsG0380012220.01.T01 MTR_3g019290 30.270 185 75 5 7 181 5 145 1.79e-16 78.2
MsG0380012220.01.T01 MTR_5g096070 37.324 142 61 5 13 148 23 142 1.94e-16 77.4
MsG0380012220.01.T01 MTR_3g103020 24.468 376 214 13 15 373 19 341 2.73e-16 81.6
MsG0380012220.01.T01 MTR_3g047580 37.143 140 65 6 7 140 5 127 3.54e-16 75.9
MsG0380012220.01.T01 MTR_5g086780 45.794 107 51 2 283 383 123 228 4.13e-16 78.6
MsG0380012220.01.T01 MTR_5g086780 46.296 108 50 3 495 596 123 228 6.03e-16 77.8
MsG0380012220.01.T01 MTR_5g057790 24.607 382 207 16 24 383 54 376 7.44e-16 80.5
MsG0380012220.01.T01 MTR_2g022020 40.566 106 57 2 513 618 17 116 1.25e-15 73.9
MsG0380012220.01.T01 MTR_2g022020 42.353 85 48 1 301 385 17 100 3.90e-15 72.4
MsG0380012220.01.T01 MTR_2g426020 23.650 389 227 14 19 379 9 355 1.27e-15 79.7
MsG0380012220.01.T01 MTR_5g096050 43.137 102 45 3 252 341 1 101 1.33e-15 73.9
MsG0380012220.01.T01 MTR_5g096050 42.157 102 46 3 464 553 1 101 2.16e-15 73.2
MsG0380012220.01.T01 MTR_4g116330 24.543 383 227 14 12 383 19 350 1.40e-15 79.3
MsG0380012220.01.T01 MTR_2g028110 25.134 374 213 17 24 379 12 336 1.61e-15 79.3
MsG0380012220.01.T01 MTR_4g109270 26.075 372 193 16 24 373 16 327 1.73e-15 79.0
MsG0380012220.01.T01 MTR_4g094400 41.739 115 45 4 456 552 2 112 1.80e-15 73.9
MsG0380012220.01.T01 MTR_4g094400 40.909 110 43 4 249 340 7 112 1.60e-14 71.2
MsG0380012220.01.T01 MTR_3g009240 26.685 371 201 16 19 378 39 349 2.14e-15 79.0
MsG0380012220.01.T01 MTR_7g055870 25.855 468 216 23 13 408 10 418 2.28e-15 79.0
MsG0380012220.01.T01 MTR_1g068860 24.324 370 223 15 24 385 12 332 2.55e-15 78.6
MsG0380012220.01.T01 MTR_6g027910 24.679 389 194 20 16 371 9 331 2.71e-15 78.6
MsG0380012220.01.T01 MTR_2g031680 21.574 394 235 12 1 379 1 335 3.13e-15 78.6
MsG0380012220.01.T01 MTR_3g034130 24.289 387 220 11 12 375 5 341 3.28e-15 78.2
MsG0380012220.01.T01 MTR_1g047080 27.066 351 148 16 53 385 1 261 4.34e-15 76.6
MsG0380012220.01.T01 MTR_4g122850 24.725 364 218 16 27 379 12 330 5.56e-15 77.4
MsG0380012220.01.T01 MTR_4g023080 24.728 368 212 12 15 373 8 319 5.70e-15 77.4
MsG0380012220.01.T01 MTR_4g070550 23.969 388 222 17 24 379 13 359 5.81e-15 77.8
MsG0380012220.01.T01 MTR_1g068875 23.913 368 222 14 24 379 12 333 6.98e-15 77.4
MsG0380012220.01.T01 MTR_1g097330 25.305 328 181 13 24 341 24 297 1.17e-14 77.0
MsG0380012220.01.T01 MTR_2g024110 25.410 366 197 15 24 371 12 319 1.24e-14 76.3
MsG0380012220.01.T01 MTR_4g080200 25.070 355 168 17 24 333 11 312 1.38e-14 75.9
MsG0380012220.01.T01 MTR_5g097660 47.191 89 45 2 295 382 8 95 1.39e-14 70.9
MsG0380012220.01.T01 MTR_5g097660 39.130 115 65 3 507 620 8 118 1.70e-14 70.9
MsG0380012220.01.T01 MTR_3g083010 23.016 378 217 14 24 371 14 347 1.57e-14 76.6
MsG0380012220.01.T01 MTR_4g117770 24.934 381 208 14 15 375 10 332 1.76e-14 75.9
MsG0380012220.01.T01 MTR_4g117810 24.934 381 208 14 15 375 10 332 1.76e-14 75.9
MsG0380012220.01.T01 MTR_2g031720 22.396 384 227 14 18 379 8 342 1.95e-14 75.9
MsG0380012220.01.T01 MTR_3g009310 26.686 341 173 15 19 341 45 326 2.02e-14 75.9
MsG0380012220.01.T01 MTR_3g013740 24.339 378 207 15 18 371 46 368 2.75e-14 75.9
MsG0380012220.01.T01 MTR_1g009110 22.637 402 243 19 6 386 4 358 3.45e-14 75.1
MsG0380012220.01.T01 MTR_5g057710 25.816 337 171 14 24 341 54 330 3.55e-14 75.1
MsG0380012220.01.T01 MTR_4g117850 23.822 382 236 13 15 388 22 356 6.07e-14 74.3
MsG0380012220.01.T01 MTR_7g407070 26.053 380 202 19 19 371 35 362 9.07e-14 73.9
MsG0380012220.01.T01 MTR_2g047832 24.936 393 224 16 15 379 28 377 9.14e-14 73.9
MsG0380012220.01.T01 MTR_3g096280 23.200 375 196 17 28 388 17 313 9.59e-14 73.6
MsG0380012220.01.T01 MTR_2g055970 24.866 374 222 13 15 377 210 535 9.65e-14 74.7
MsG0380012220.01.T01 MTR_3g011060 25.781 384 198 20 24 380 36 359 1.05e-13 73.6
MsG0380012220.01.T01 MTR_2g025960 23.134 268 166 9 110 371 8 241 1.39e-13 72.4
MsG0380012220.01.T01 MTR_2g028160 22.716 405 224 16 19 379 8 367 1.54e-13 73.6
MsG0380012220.01.T01 MTR_2g461450 26.042 384 200 19 24 381 26 351 2.07e-13 72.4
MsG0380012220.01.T01 MTR_5g007610 24.269 342 191 14 19 341 44 336 2.31e-13 72.8
MsG0380012220.01.T01 MTR_2g021190 25.137 366 205 18 19 371 24 333 2.37e-13 72.4
MsG0380012220.01.T01 MTR_5g036250 53.846 65 29 1 321 385 27 90 2.59e-13 69.3
MsG0380012220.01.T01 MTR_5g036250 51.515 66 30 1 533 598 27 90 1.75e-12 66.6
MsG0380012220.01.T01 MTR_2g425980 23.990 396 220 17 19 380 8 356 3.82e-13 72.0
MsG0380012220.01.T01 MTR_2g426060 23.196 388 222 17 24 380 14 356 3.88e-13 72.0
MsG0380012220.01.T01 MTR_4g023120 23.925 372 212 14 25 373 12 335 3.97e-13 71.6
MsG0380012220.01.T01 MTR_2g078850 23.145 337 189 10 19 341 33 313 4.71e-13 71.6
MsG0380012220.01.T01 MTR_8g467140 24.924 329 197 11 15 338 31 314 6.17e-13 70.9
MsG0380012220.01.T01 MTR_1g050542 24.866 374 214 15 19 379 61 380 1.27e-12 70.5
MsG0380012220.01.T01 MTR_5g048160 25.065 387 234 15 24 385 12 367 1.53e-12 70.1
MsG0380012220.01.T01 MTR_1g094210 22.864 398 211 17 18 386 59 389 1.85e-12 70.1
MsG0380012220.01.T01 MTR_0760s0010 24.540 326 180 13 24 341 55 322 2.08e-12 69.7
MsG0380012220.01.T01 MTR_2g021155 25.959 339 175 16 19 339 39 319 2.08e-12 70.9
MsG0380012220.01.T01 MTR_3g036430 21.469 354 201 12 19 372 23 299 2.11e-12 69.3
MsG0380012220.01.T01 MTR_2g025420 25.215 349 198 16 24 345 14 326 2.57e-12 69.7
MsG0380012220.01.T01 MTR_3g006570 24.147 381 215 19 5 371 10 330 2.63e-12 69.3
MsG0380012220.01.T01 MTR_8g041440 50.725 69 33 1 8 75 7 75 2.82e-12 64.3
MsG0380012220.01.T01 MTR_1g094210 22.656 384 207 16 16 376 57 373 3.13e-12 69.3
MsG0380012220.01.T01 MTR_1g055375 24.462 372 221 16 19 378 7 330 3.19e-12 68.9
MsG0380012220.01.T01 MTR_3g007270 23.684 342 194 13 19 341 50 343 3.98e-12 68.9
MsG0380012220.01.T01 MTR_3g047540 41.250 80 33 2 425 504 3 68 5.28e-12 62.4
MsG0380012220.01.T01 MTR_8g099460 23.421 380 222 17 24 380 13 346 5.54e-12 68.6
MsG0380012220.01.T01 MTR_6g021880 23.691 363 210 15 27 372 31 343 5.55e-12 68.2
MsG0380012220.01.T01 MTR_4g117750 25.000 360 184 13 29 364 16 313 5.57e-12 68.9
MsG0380012220.01.T01 MTR_2g046800 23.077 403 220 18 18 379 16 369 5.78e-12 68.2
MsG0380012220.01.T01 MTR_3g009260 26.146 371 186 20 19 371 44 344 7.19e-12 68.2
MsG0380012220.01.T01 MTR_8g032390 23.714 350 203 11 15 361 39 327 8.97e-12 67.4
MsG0380012220.01.T01 MTR_2g046830 22.693 401 237 17 15 391 24 375 1.08e-11 67.4
MsG0380012220.01.T01 MTR_2g031700 22.727 308 172 11 1 294 1 256 2.17e-11 65.5
MsG0380012220.01.T01 MTR_6g087660 47.887 71 34 1 9 76 11 81 2.36e-11 63.9
MsG0380012220.01.T01 MTR_1g115160 22.826 368 198 14 19 371 25 321 3.57e-11 65.9
MsG0380012220.01.T01 MTR_3g024110 23.438 384 210 16 19 385 104 420 3.87e-11 65.9
MsG0380012220.01.T01 MTR_4g023070 23.592 373 212 13 25 373 12 335 4.47e-11 65.5
MsG0380012220.01.T01 MTR_6g048140 24.444 405 219 15 1 374 24 372 5.32e-11 65.5
MsG0380012220.01.T01 MTR_1g050305 39.130 92 47 3 297 385 18 103 5.39e-11 61.2
MsG0380012220.01.T01 MTR_1g054575 25.309 324 188 13 19 338 55 328 8.67e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012220.01.T01 AT4G12560 26.289 388 231 16 19 394 7 351 5.03e-21 96.3
MsG0380012220.01.T01 AT4G12560 26.289 388 231 16 19 394 7 351 5.03e-21 96.3
MsG0380012220.01.T01 AT4G12560 26.289 388 231 16 19 394 7 351 5.03e-21 96.3
MsG0380012220.01.T01 AT4G22390 24.051 316 194 13 92 398 74 352 7.18e-12 68.2
MsG0380012220.01.T01 AT4G22390 24.051 316 194 13 92 398 74 352 8.10e-12 68.2
MsG0380012220.01.T01 AT2G40920 23.250 400 225 17 19 385 57 407 4.02e-11 65.9
MsG0380012220.01.T01 AT2G40920 23.291 395 221 17 24 385 3 348 5.86e-11 65.1
MsG0380012220.01.T01 AT2G40925 21.481 405 250 16 16 397 27 386 6.04e-11 65.1
MsG0380012220.01.T01 AT3G07870 25.070 359 215 14 18 359 30 351 8.17e-11 65.1

Find 99 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCTGCCAAAAGGGTTTA+AGG 0.147956 3:-12890791 None:intergenic
TTGCTCGTGGCCGGTTATTA+TGG 0.214180 3:+12888902 MsG0380012220.01.T01:CDS
CGCACTATGATTCATGGATT+TGG 0.239874 3:+12888674 MsG0380012220.01.T01:CDS
AATGGCTTTGCGAGTGTTAA+TGG 0.242296 3:+12888515 MsG0380012220.01.T01:CDS
ACCTATTGTTCATAAATATA+AGG 0.257658 3:+12888631 MsG0380012220.01.T01:CDS
GTCAAGGTTATTCCTCCTTC+TGG 0.266896 3:+12888596 MsG0380012220.01.T01:CDS
ACCTTTCACCTGATAGAAAA+TGG 0.268310 3:-12888436 None:intergenic
CGCTCTAGCTTCGTTTCCTA+TGG 0.280146 3:+12889222 MsG0380012220.01.T01:CDS
CACCATCGCACTATGATTCA+TGG 0.281825 3:+12888668 MsG0380012220.01.T01:CDS
AATCGTTTCAAAGATTTAAT+CGG 0.291137 3:-12888272 None:intergenic
TATTTCATGCTCAAATTGTT+TGG 0.300380 3:+12890701 MsG0380012220.01.T01:CDS
AATGTCACTGCTACAGAAAT+TGG 0.311940 3:-12888195 None:intergenic
CAGGTGAAAGGTTTGAGAAT+TGG 0.313325 3:+12888447 MsG0380012220.01.T01:CDS
ATACATGCTTCTGCAGAAAA+AGG 0.314948 3:-12890963 None:intergenic
ATGAATCCCTTAAACCCTTT+TGG 0.330629 3:+12890784 MsG0380012220.01.T01:CDS
ACTGCACGATAGGATTTAAC+TGG 0.332756 3:-12888485 None:intergenic
ATGGATCCCTTCAACCCTTT+TGG 0.336998 3:+12888813 MsG0380012220.01.T01:CDS
CTCTATTGCTGATGACTATA+AGG 0.338075 3:+12888703 MsG0380012220.01.T01:CDS
AGGTGAAAGGTTTGAGAATT+GGG 0.355603 3:+12888448 MsG0380012220.01.T01:CDS
TGTCTATGCCTCGTTGTCAT+TGG 0.357389 3:+12888963 MsG0380012220.01.T01:CDS
TGTCTATGCCTCGTTGTCAT+TGG 0.357389 3:+12890934 MsG0380012220.01.T01:CDS
TCTAGCTACGTTGTTTCCTA+TGG 0.365857 3:+12891196 MsG0380012220.01.T01:CDS
AATCTGCCAAAAGGGTTTAA+GGG 0.371094 3:-12890790 None:intergenic
ATCGTTTCAAAGATTTAATC+GGG 0.394777 3:-12888271 None:intergenic
GCCTTATATTTATGAACAAT+AGG 0.399448 3:-12888632 None:intergenic
ACTACAAAAGTTTCTCACTA+TGG 0.400585 3:+12888555 MsG0380012220.01.T01:CDS
CAGTCTAACGTACGATGGTA+TGG 0.417473 3:-12889056 None:intergenic
TAGGCTATAAATCTGCCAAA+AGG 0.424381 3:-12888828 None:intergenic
TAGGCTATAAATCTGCCAAA+AGG 0.424381 3:-12890799 None:intergenic
CAATCATTGTTGTTGCAAGA+TGG 0.429012 3:+12888794 MsG0380012220.01.T01:CDS
TCAAGGTTATTCCTCCTTCT+GGG 0.436414 3:+12888597 MsG0380012220.01.T01:CDS
ACCTTGACTTCGTCCGTAGT+TGG 0.437759 3:-12888581 None:intergenic
GCTCTAGCTTCGTTTCCTAT+GGG 0.441889 3:+12889223 MsG0380012220.01.T01:CDS
TCGGAAATTTCCATGCAAAC+TGG 0.448497 3:-12890883 None:intergenic
AAATCTGCCAAAAGGGTTGA+AGG 0.449446 3:-12888820 None:intergenic
TCCAAGCTCTACAATCTTGT+TGG 0.450091 3:-12889314 None:intergenic
TCCAAGCTCTACAATCTTGT+TGG 0.450091 3:-12891288 None:intergenic
TCGGAAATTTCCATAATAAC+CGG 0.463734 3:-12888912 None:intergenic
CAGTCTAACGTACGAGGGTA+GGG 0.467692 3:-12891027 None:intergenic
AGTGATGATGAGCTAGCTAT+AGG 0.468034 3:+12888761 MsG0380012220.01.T01:CDS
TCTTCAACTTTGCTCGTGGC+CGG 0.469387 3:+12888893 MsG0380012220.01.T01:CDS
AGGCTATAAATCTGCCAAAA+GGG 0.480501 3:-12888827 None:intergenic
AGGCTATAAATCTGCCAAAA+GGG 0.480501 3:-12890798 None:intergenic
ACCAACAAGATTGTAGAGCT+TGG 0.485184 3:+12889313 MsG0380012220.01.T01:CDS
ACCAACAAGATTGTAGAGCT+TGG 0.485184 3:+12891287 MsG0380012220.01.T01:CDS
CTAGCTACGTTGTTTCCTAT+GGG 0.494921 3:+12891197 MsG0380012220.01.T01:CDS
TTGCTCGTGGCCAGTTTGCA+TGG 0.496126 3:+12890873 MsG0380012220.01.T01:CDS
CCTATGGGAGTCGGTATGAA+TGG 0.496787 3:+12891212 MsG0380012220.01.T01:CDS
ATAAGAGATAAATTGACTCT+TGG 0.498155 3:+12891317 MsG0380012220.01.T01:CDS
TGTAGCAGTGACATTGTAAG+TGG 0.499702 3:+12888203 MsG0380012220.01.T01:CDS
ATTGATTTCAACTGCACGAT+AGG 0.518009 3:-12888495 None:intergenic
ATATGAATGGAGTGTGTCAT+TGG 0.519239 3:+12890910 MsG0380012220.01.T01:CDS
AATTTGGTGTGAAGGAATCA+TGG 0.521840 3:+12889170 MsG0380012220.01.T01:CDS
TTGAATGCGTAAGTAAATCA+TGG 0.523232 3:+12888294 MsG0380012220.01.T01:CDS
AATTTCCGAGTGTATATGAA+TGG 0.524704 3:+12888926 MsG0380012220.01.T01:CDS
AATTTCCGAGTGTATATGAA+TGG 0.524704 3:+12890897 MsG0380012220.01.T01:CDS
ATATGAATGGAGCGTGTCAT+TGG 0.526059 3:+12888939 MsG0380012220.01.T01:CDS
TCATTCTTCAACTTTGCTCG+TGG 0.526504 3:+12888889 MsG0380012220.01.T01:CDS
TCATTCTTCAACTTTGCTCG+TGG 0.526504 3:+12890860 MsG0380012220.01.T01:CDS
TATCGTGCAGTTGAAATCAA+TGG 0.529539 3:+12888497 MsG0380012220.01.T01:CDS
GAGCTTTGATAGAATAAAGA+AGG 0.530670 3:-12888249 None:intergenic
CTCTAGCTTCGTTTCCTATG+GGG 0.534176 3:+12889224 MsG0380012220.01.T01:CDS
ATAAGAGATAGATTGACTCT+TGG 0.537778 3:+12889343 MsG0380012220.01.T01:CDS
TTTGGGTGAATTTGGTGTGA+AGG 0.550658 3:+12889162 MsG0380012220.01.T01:CDS
TCAGTCTAACGTACGAGGGT+AGG 0.560829 3:-12891028 None:intergenic
AATCTGCCAAAAGGGTTGAA+GGG 0.564047 3:-12888819 None:intergenic
CTCACTATGGAATCCAACTA+CGG 0.566499 3:+12888568 MsG0380012220.01.T01:CDS
AAGTTGGTGTGAAAGAATCA+TGG 0.567256 3:+12891141 MsG0380012220.01.T01:CDS
AGAGAAGAAGATCAAGGCAA+TGG 0.567423 3:-12889110 None:intergenic
AGAGAAGAAGATCAAGGCAA+TGG 0.572161 3:-12891081 None:intergenic
AGTCTAACGTACGATGGTAT+GGG 0.572824 3:-12889055 None:intergenic
TCCAACTACGGACGAAGTCA+AGG 0.573188 3:+12888580 MsG0380012220.01.T01:CDS
GTTCACAGAGAAGAAGATCA+AGG 0.574036 3:-12889116 None:intergenic
TGTTCATAAATATAAGGCGG+CGG 0.575363 3:+12888637 MsG0380012220.01.T01:CDS
CCATTCATACCGACTCCCAT+AGG 0.575798 3:-12891212 None:intergenic
ACGTTGTTTCCTATGGGAGT+CGG 0.581353 3:+12891203 MsG0380012220.01.T01:CDS
CCTCGTACGTTAGACTGACA+TGG 0.582002 3:+12891033 MsG0380012220.01.T01:CDS
TCTAGCTTCGTTTCCTATGG+GGG 0.582385 3:+12889225 MsG0380012220.01.T01:CDS
GGAAACGAAGCTAGAGCGCA+AGG 0.583557 3:-12889217 None:intergenic
GGAAGAAGTGTCCCAGAAGG+AGG 0.592440 3:-12888608 None:intergenic
AGTCTAACGTACGAGGGTAG+GGG 0.596563 3:-12891026 None:intergenic
TTATATTTATGAACAATAGG+TGG 0.597641 3:-12888629 None:intergenic
ACGAGCAAAGTTGAAGAATG+AGG 0.599374 3:-12888887 None:intergenic
ACGAGCAAAGTTGAAGAATG+AGG 0.599374 3:-12890858 None:intergenic
GATTATAGAGAAGAAGATCA+AGG 0.602159 3:-12891087 None:intergenic
CCATGTCAGTCTAACGTACG+AGG 0.605499 3:-12891033 None:intergenic
ATCCATGAATCATAGTGCGA+TGG 0.608964 3:-12888670 None:intergenic
CATCGTACGTTAGACTGACA+TGG 0.611399 3:+12889062 MsG0380012220.01.T01:CDS
GGTGGAAGAAGTGTCCCAGA+AGG 0.613290 3:-12888611 None:intergenic
AACAACGTAGCTAGAGCGCA+AGG 0.635054 3:-12891188 None:intergenic
ACACTCCATTCATATACACT+CGG 0.645378 3:-12890902 None:intergenic
AGCAGTGACATTGTAAGTGG+AGG 0.648814 3:+12888206 MsG0380012220.01.T01:CDS
ACGCTCCATTCATATACACT+CGG 0.656010 3:-12888931 None:intergenic
TATTGTTCATAAATATAAGG+CGG 0.671854 3:+12888634 MsG0380012220.01.T01:CDS
CATGTCAGTCTAACGTACGA+TGG 0.722778 3:-12889061 None:intergenic
TGTCAGAGCAGATATTTACG+AGG 0.740938 3:-12888403 None:intergenic
CATGTCAGTCTAACGTACGA+GGG 0.742007 3:-12891032 None:intergenic
GGAACAGTCCAATGACAACG+AGG 0.753429 3:-12888971 None:intergenic
GGAACAGTCCAATGACAACG+AGG 0.753429 3:-12890942 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTTATTCTTTCGAT+TGG - Chr3:12889400-12889419 None:intergenic 15.0%
!! ATTCAGAGAAATTATTTATA+CGG + Chr3:12889893-12889912 MsG0380012220.01.T01:intron 15.0%
!! CATTATGTTAATGATAAATT+CGG - Chr3:12890293-12890312 None:intergenic 15.0%
!! TAAAAATAAGAGACAATTAA+TGG - Chr3:12890486-12890505 None:intergenic 15.0%
!! TTAAATGAATAAAATCCTAT+TGG - Chr3:12890633-12890652 None:intergenic 15.0%
!! TTGTATTAATATTGAACTAA+TGG - Chr3:12889550-12889569 None:intergenic 15.0%
!! TTGTTTAGTTAATACTAATA+AGG - Chr3:12890048-12890067 None:intergenic 15.0%
!!! ATTTTTCACATATCAATTTT+GGG + Chr3:12889145-12889164 MsG0380012220.01.T01:CDS 15.0%
!!! TATTTTTCACATATCAATTT+TGG + Chr3:12889144-12889163 MsG0380012220.01.T01:CDS 15.0%
!! AATCGTTTCAAAGATTTAAT+CGG - Chr3:12888275-12888294 None:intergenic 20.0%
!! AATCTTGATATGTTATCATT+TGG + Chr3:12889513-12889532 MsG0380012220.01.T01:intron 20.0%
!! AATGTCATTATGCATAATAA+CGG - Chr3:12890389-12890408 None:intergenic 20.0%
!! ACCTATTGTTCATAAATATA+AGG + Chr3:12888631-12888650 MsG0380012220.01.T01:CDS 20.0%
!! TATTGTTCATAAATATAAGG+CGG + Chr3:12888634-12888653 MsG0380012220.01.T01:CDS 20.0%
!! TTATATTTATGAACAATAGG+TGG - Chr3:12888632-12888651 None:intergenic 20.0%
!!! TAGTAACAAAATTTTCAATC+TGG - Chr3:12889719-12889738 None:intergenic 20.0%
!!! TCTTATTTTTATATCCCTTT+AGG + Chr3:12890495-12890514 MsG0380012220.01.T01:intron 20.0%
! AATGCATATCAACAAAGAAA+AGG - Chr3:12890008-12890027 None:intergenic 25.0%
! ACGCGTTTAAAGAATTTAAT+AGG - Chr3:12889609-12889628 None:intergenic 25.0%
! ATCGTTTCAAAGATTTAATC+GGG - Chr3:12888274-12888293 None:intergenic 25.0%
! ATGCATATCAACAAAGAAAA+GGG - Chr3:12890007-12890026 None:intergenic 25.0%
! ATTATGCATAATGACATTGT+TGG + Chr3:12890391-12890410 MsG0380012220.01.T01:intron 25.0%
! ATTTGAATCTCTTACTCATA+CGG + Chr3:12890252-12890271 MsG0380012220.01.T01:intron 25.0%
! GAAATATGAATCAATGTCTT+TGG - Chr3:12890127-12890146 None:intergenic 25.0%
! GCCTTATATTTATGAACAAT+AGG - Chr3:12888635-12888654 None:intergenic 25.0%
! TATTTCATGCTCAAATTGTT+TGG + Chr3:12890701-12890720 MsG0380012220.01.T01:CDS 25.0%
! TTATATTATGAACCACCTTT+AGG + Chr3:12890678-12890697 MsG0380012220.01.T01:intron 25.0%
! TTGATATGTTATCATTTGGA+TGG + Chr3:12889517-12889536 MsG0380012220.01.T01:intron 25.0%
!! AAAAAGTTCCATTTTCTATC+AGG + Chr3:12888428-12888447 MsG0380012220.01.T01:CDS 25.0%
!! ATAAGAGATAAATTGACTCT+TGG + Chr3:12891317-12891336 MsG0380012220.01.T01:CDS 25.0%
!! CTTTTATCTCAATCTTATGA+CGG + Chr3:12888368-12888387 MsG0380012220.01.T01:CDS 25.0%
!!! AATTTTGTTGCTTTTGCATT+TGG + Chr3:12889793-12889812 MsG0380012220.01.T01:intron 25.0%
!!! ATATCAATTTTGGGTGAATT+TGG + Chr3:12889154-12889173 MsG0380012220.01.T01:CDS 25.0%
!!! ATTCTAAAATTTCCATTGCT+TGG - Chr3:12890154-12890173 None:intergenic 25.0%
!!! GACAATTAATGGATTATAAG+AGG - Chr3:12890475-12890494 None:intergenic 25.0%
!!! TTATTCTTTTGATTGGAAGA+AGG - Chr3:12891367-12891386 None:intergenic 25.0%
!!! TTCTAAAATTTCCATTGCTT+GGG - Chr3:12890153-12890172 None:intergenic 25.0%
AACAAAGAAAAGGGAAGTTA+TGG - Chr3:12889998-12890017 None:intergenic 30.0%
AACTACAATGAAGAATATGC+AGG - Chr3:12889489-12889508 None:intergenic 30.0%
AACTTGAGTGAAAATCCTAA+AGG - Chr3:12890513-12890532 None:intergenic 30.0%
AATTTCCGAGTGTATATGAA+TGG + Chr3:12888926-12888945 MsG0380012220.01.T01:CDS 30.0%
ACTACAAAAGTTTCTCACTA+TGG + Chr3:12888555-12888574 MsG0380012220.01.T01:CDS 30.0%
ACTTGAGTGAAAATCCTAAA+GGG - Chr3:12890512-12890531 None:intergenic 30.0%
AGAATATCAATCTGCTAGAA+TGG - Chr3:12890434-12890453 None:intergenic 30.0%
AGTAAGAGATTCAAATGAAC+CGG - Chr3:12890248-12890267 None:intergenic 30.0%
ATAAATTACCACAACTCAGA+AGG - Chr3:12889836-12889855 None:intergenic 30.0%
ATACATGCTTCTGCAAAAAA+AGG - Chr3:12888995-12889014 None:intergenic 30.0%
ATGCAAAAGCAACAAAATTG+TGG - Chr3:12889792-12889811 None:intergenic 30.0%
CAAACATTACACAATACAAC+CGG + Chr3:12890065-12890084 MsG0380012220.01.T01:intron 30.0%
GATTATAAGAGGCTTGAATA+AGG - Chr3:12890464-12890483 None:intergenic 30.0%
GATTATAGAGAAGAAGATCA+AGG - Chr3:12891090-12891109 None:intergenic 30.0%
TAATAAATCGCGTAACTTAC+CGG - Chr3:12890087-12890106 None:intergenic 30.0%
TCGGAAATTTCCATAATAAC+CGG - Chr3:12888915-12888934 None:intergenic 30.0%
TCTTGCTTAAATGCTTTGAT+AGG + Chr3:12890606-12890625 MsG0380012220.01.T01:intron 30.0%
TCTTTGTTGATATGCATTTG+CGG + Chr3:12890010-12890029 MsG0380012220.01.T01:intron 30.0%
TTATTCTTTCGATTGGAAGA+AGG - Chr3:12889393-12889412 None:intergenic 30.0%
TTGAATGCGTAAGTAAATCA+TGG + Chr3:12888294-12888313 MsG0380012220.01.T01:CDS 30.0%
TTTGAGCATGAAATACCTAA+AGG - Chr3:12890696-12890715 None:intergenic 30.0%
! ATAAGAGATAGATTGACTCT+TGG + Chr3:12889343-12889362 MsG0380012220.01.T01:CDS 30.0%
! GAGCTTTGATAGAATAAAGA+AGG - Chr3:12888252-12888271 None:intergenic 30.0%
! TCTAAAATTTCCATTGCTTG+GGG - Chr3:12890152-12890171 None:intergenic 30.0%
!! ATATCAATTTTGGGTGAAGT+TGG + Chr3:12891125-12891144 MsG0380012220.01.T01:CDS 30.0%
!! ATGTTGATAATTACCTAGCA+AGG - Chr3:12890555-12890574 None:intergenic 30.0%
!!! TTTTTTTGCAGAAGCATGTA+TGG + Chr3:12888994-12889013 MsG0380012220.01.T01:CDS 30.0%
AAATCTGCCAAAAGGGTTTA+AGG - Chr3:12890794-12890813 None:intergenic 35.0%
AACTTCAATTCAGTCACTCA+TGG + Chr3:12890193-12890212 MsG0380012220.01.T01:intron 35.0%
AAGAAAAGGGAAGTTATGGA+AGG - Chr3:12889994-12890013 None:intergenic 35.0%
AATCTGCCAAAAGGGTTTAA+GGG - Chr3:12890793-12890812 None:intergenic 35.0%
AATGCTTTGATAGGTCCAAT+AGG + Chr3:12890615-12890634 MsG0380012220.01.T01:intron 35.0%
AATGTCACTGCTACAGAAAT+TGG - Chr3:12888198-12888217 None:intergenic 35.0%
ACACTCCATTCATATACACT+CGG - Chr3:12890905-12890924 None:intergenic 35.0%
ACCTTTCACCTGATAGAAAA+TGG - Chr3:12888439-12888458 None:intergenic 35.0%
ACTCATTTGACCAAATTGCA+TGG - Chr3:12889641-12889660 None:intergenic 35.0%
AGAAAAGGGAAGTTATGGAA+GGG - Chr3:12889993-12890012 None:intergenic 35.0%
AGAAAGGAAAGCAAAGCAAA+TGG - Chr3:12889462-12889481 None:intergenic 35.0%
AGAATATGCAGGCATAAGAA+AGG - Chr3:12889478-12889497 None:intergenic 35.0%
AGGCTATAAATCTGCCAAAA+GGG - Chr3:12888830-12888849 None:intergenic 35.0%
AGGTGAAAGGTTTGAGAATT+GGG + Chr3:12888448-12888467 MsG0380012220.01.T01:CDS 35.0%
ATACATGCTTCTGCAGAAAA+AGG - Chr3:12890966-12890985 None:intergenic 35.0%
ATAGCCTAAAAAGTAACTCG+TGG + Chr3:12888843-12888862 MsG0380012220.01.T01:CDS 35.0%
ATATGAATGGAGTGTGTCAT+TGG + Chr3:12890910-12890929 MsG0380012220.01.T01:CDS 35.0%
CTCTATTGCTGATGACTATA+AGG + Chr3:12888703-12888722 MsG0380012220.01.T01:CDS 35.0%
TAGGCTATAAATCTGCCAAA+AGG - Chr3:12888831-12888850 None:intergenic 35.0%
TATCGTGCAGTTGAAATCAA+TGG + Chr3:12888497-12888516 MsG0380012220.01.T01:CDS 35.0%
TGCATAATAACGGTTTCATC+CGG - Chr3:12890379-12890398 None:intergenic 35.0%
TGTTCATAAATATAAGGCGG+CGG + Chr3:12888637-12888656 MsG0380012220.01.T01:CDS 35.0%
! ATGAATCCCTTAAACCCTTT+TGG + Chr3:12890784-12890803 MsG0380012220.01.T01:CDS 35.0%
! ATTGATTTCAACTGCACGAT+AGG - Chr3:12888498-12888517 None:intergenic 35.0%
! CAATCATTGTTGTTGCAAGA+TGG + Chr3:12888794-12888813 MsG0380012220.01.T01:CDS 35.0%
! TCCATTTTCTATCAGGTGAA+AGG + Chr3:12888435-12888454 MsG0380012220.01.T01:CDS 35.0%
!! AAGACACTTTCTAGTTGACT+AGG + Chr3:12889436-12889455 MsG0380012220.01.T01:intron 35.0%
!! AAGTTGGTGTGAAAGAATCA+TGG + Chr3:12891141-12891160 MsG0380012220.01.T01:CDS 35.0%
!! AATTTGGTGTGAAGGAATCA+TGG + Chr3:12889170-12889189 MsG0380012220.01.T01:CDS 35.0%
!! TTTTTCTGCAGAAGCATGTA+TGG + Chr3:12890965-12890984 MsG0380012220.01.T01:CDS 35.0%
!!! TCTTCCACGAGTTACTTTTT+AGG - Chr3:12888850-12888869 None:intergenic 35.0%
AAATCTGCCAAAAGGGTTGA+AGG - Chr3:12888823-12888842 None:intergenic 40.0%
AATCTGCCAAAAGGGTTGAA+GGG - Chr3:12888822-12888841 None:intergenic 40.0%
ACCAACAAGATTGTAGAGCT+TGG + Chr3:12889313-12889332 MsG0380012220.01.T01:CDS 40.0%
ACGAGCAAAGTTGAAGAATG+AGG - Chr3:12888890-12888909 None:intergenic 40.0%
ACGCTCCATTCATATACACT+CGG - Chr3:12888934-12888953 None:intergenic 40.0%
ACTGCACGATAGGATTTAAC+TGG - Chr3:12888488-12888507 None:intergenic 40.0%
AGAGAAGAAGATCAAGGCAA+TGG - Chr3:12889113-12889132 None:intergenic 40.0%
AGTCTAACGTACGATGGTAT+GGG - Chr3:12889058-12889077 None:intergenic 40.0%
AGTTCGATAATCAGTTGCGT+CGG - Chr3:12890177-12890196 None:intergenic 40.0%
ATATGAATGGAGCGTGTCAT+TGG + Chr3:12888939-12888958 MsG0380012220.01.T01:CDS 40.0%
ATCAATGTCTTTGGCAACTG+AGG - Chr3:12890118-12890137 None:intergenic 40.0%
ATCCATGAATCATAGTGCGA+TGG - Chr3:12888673-12888692 None:intergenic 40.0%
CAACTCAGAAGGAAACATGA+AGG - Chr3:12889825-12889844 None:intergenic 40.0%
CAGGTGAAAGGTTTGAGAAT+TGG + Chr3:12888447-12888466 MsG0380012220.01.T01:CDS 40.0%
CATATTTCTTCCCCAAGCAA+TGG + Chr3:12890139-12890158 MsG0380012220.01.T01:intron 40.0%
CCTCCAAGGAAAAAACAATC+CGG + Chr3:12890226-12890245 MsG0380012220.01.T01:intron 40.0%
CGCACTATGATTCATGGATT+TGG + Chr3:12888674-12888693 MsG0380012220.01.T01:CDS 40.0%
CTCACTATGGAATCCAACTA+CGG + Chr3:12888568-12888587 MsG0380012220.01.T01:CDS 40.0%
GAGCATGAAATACCTAAAGG+TGG - Chr3:12890693-12890712 None:intergenic 40.0%
GTTCACAGAGAAGAAGATCA+AGG - Chr3:12889119-12889138 None:intergenic 40.0%
TCAAGGTTATTCCTCCTTCT+GGG + Chr3:12888597-12888616 MsG0380012220.01.T01:CDS 40.0%
TCATGTTTCCTTCTGAGTTG+TGG + Chr3:12889825-12889844 MsG0380012220.01.T01:intron 40.0%
TCATTCTTCAACTTTGCTCG+TGG + Chr3:12888889-12888908 MsG0380012220.01.T01:CDS 40.0%
TCCAAGCTCTACAATCTTGT+TGG - Chr3:12889317-12889336 None:intergenic 40.0%
TCGGAAATTTCCATGCAAAC+TGG - Chr3:12890886-12890905 None:intergenic 40.0%
TGACCAAATTGCATGGATCA+AGG - Chr3:12889634-12889653 None:intergenic 40.0%
TGACCTTGATCCATGCAATT+TGG + Chr3:12889628-12889647 MsG0380012220.01.T01:intron 40.0%
TGTAGCAGTGACATTGTAAG+TGG + Chr3:12888203-12888222 MsG0380012220.01.T01:CDS 40.0%
TGTCAGAGCAGATATTTACG+AGG - Chr3:12888406-12888425 None:intergenic 40.0%
TGTGAAAGTTGCACCTCAAT+TGG + Chr3:12889931-12889950 MsG0380012220.01.T01:intron 40.0%
! AATGGCTTTGCGAGTGTTAA+TGG + Chr3:12888515-12888534 MsG0380012220.01.T01:CDS 40.0%
! ACGAGTTCTAATCAAGAGCA+AGG - Chr3:12889690-12889709 None:intergenic 40.0%
! AGTGATGATGAGCTAGCTAT+AGG + Chr3:12888761-12888780 MsG0380012220.01.T01:CDS 40.0%
! CTAGCTACGTTGTTTCCTAT+GGG + Chr3:12891197-12891216 MsG0380012220.01.T01:CDS 40.0%
! GTTTCATCCGGTGCTAATTA+GGG - Chr3:12890367-12890386 None:intergenic 40.0%
! TCTAGCTACGTTGTTTCCTA+TGG + Chr3:12891196-12891215 MsG0380012220.01.T01:CDS 40.0%
!! AAACCGAAGTTTGCTGGTAT+AGG - Chr3:12890319-12890338 None:intergenic 40.0%
!! TTTGGGTGAATTTGGTGTGA+AGG + Chr3:12889162-12889181 MsG0380012220.01.T01:CDS 40.0%
!!! GAACCGGATTGTTTTTTCCT+TGG - Chr3:12890232-12890251 None:intergenic 40.0%
!!! TTTTTCCTTGGAGGTGTCTT+TGG - Chr3:12890220-12890239 None:intergenic 40.0%
AAGGGTAAACCGAAGTTTGC+TGG - Chr3:12890325-12890344 None:intergenic 45.0%
AGACTGCAGAGATCCAATTG+AGG - Chr3:12889947-12889966 None:intergenic 45.0%
AGCAAACTTCGGTTTACCCT+TGG + Chr3:12890324-12890343 MsG0380012220.01.T01:intron 45.0%
AGCAGTGACATTGTAAGTGG+AGG + Chr3:12888206-12888225 MsG0380012220.01.T01:CDS 45.0%
CACCATCGCACTATGATTCA+TGG + Chr3:12888668-12888687 MsG0380012220.01.T01:CDS 45.0%
CAGTCTAACGTACGATGGTA+TGG - Chr3:12889059-12889078 None:intergenic 45.0%
CATCGTACGTTAGACTGACA+TGG + Chr3:12889062-12889081 MsG0380012220.01.T01:CDS 45.0%
CATGTCAGTCTAACGTACGA+GGG - Chr3:12889064-12889083 None:intergenic 45.0%
CATGTCAGTCTAACGTACGA+TGG - Chr3:12889064-12889083 None:intergenic 45.0%
CCTCCTATACCAGCAAACTT+CGG + Chr3:12890313-12890332 MsG0380012220.01.T01:intron 45.0%
GGAAGTTATGGAAGGGAGAT+GGG - Chr3:12889986-12890005 None:intergenic 45.0%
GTCAAGGTTATTCCTCCTTC+TGG + Chr3:12888596-12888615 MsG0380012220.01.T01:CDS 45.0%
TGAGTCGCACTTATGCGATT+TGG + Chr3:12889656-12889675 MsG0380012220.01.T01:intron 45.0%
TGTCTATGCCTCGTTGTCAT+TGG + Chr3:12888963-12888982 MsG0380012220.01.T01:CDS 45.0%
! ACGTTGTTTCCTATGGGAGT+CGG + Chr3:12891203-12891222 MsG0380012220.01.T01:CDS 45.0%
! ATGGATCCCTTCAACCCTTT+TGG + Chr3:12888813-12888832 MsG0380012220.01.T01:CDS 45.0%
! CTCTAGCTTCGTTTCCTATG+GGG + Chr3:12889224-12889243 MsG0380012220.01.T01:CDS 45.0%
! GCTCTAGCTTCGTTTCCTAT+GGG + Chr3:12889223-12889242 MsG0380012220.01.T01:CDS 45.0%
! GGTTTCATCCGGTGCTAATT+AGG - Chr3:12890368-12890387 None:intergenic 45.0%
! TCTAGCTTCGTTTCCTATGG+GGG + Chr3:12889225-12889244 MsG0380012220.01.T01:CDS 45.0%
!!! CCGGATTGTTTTTTCCTTGG+AGG - Chr3:12890229-12890248 None:intergenic 45.0%
AACAACGTAGCTAGAGCGCA+AGG - Chr3:12891191-12891210 None:intergenic 50.0%
ACCTAGCAAGGTAGAGATGC+AGG - Chr3:12890543-12890562 None:intergenic 50.0%
ACCTTGACTTCGTCCGTAGT+TGG - Chr3:12888584-12888603 None:intergenic 50.0%
AGTCTAACGTACGAGGGTAG+GGG - Chr3:12891029-12891048 None:intergenic 50.0%
ATGGTCCAAAGACACCTCCA+AGG + Chr3:12890212-12890231 MsG0380012220.01.T01:intron 50.0%
CAGTCTAACGTACGAGGGTA+GGG - Chr3:12891030-12891049 None:intergenic 50.0%
CCATGTCAGTCTAACGTACG+AGG - Chr3:12889065-12889084 None:intergenic 50.0%
CCATTCATAACGACCCCCAT+AGG - Chr3:12889241-12889260 None:intergenic 50.0%
CCTATGGGAGTCGGTATGAA+TGG + Chr3:12891212-12891231 MsG0380012220.01.T01:CDS 50.0%
CCTATGGGGGTCGTTATGAA+TGG + Chr3:12889238-12889257 MsG0380012220.01.T01:CDS 50.0%
CCTCGTACGTTAGACTGACA+TGG + Chr3:12891033-12891052 MsG0380012220.01.T01:CDS 50.0%
GGAACAGTCCAATGACAACG+AGG - Chr3:12888974-12888993 None:intergenic 50.0%
GGGAAGTTATGGAAGGGAGA+TGG - Chr3:12889987-12890006 None:intergenic 50.0%
TCAGTCTAACGTACGAGGGT+AGG - Chr3:12891031-12891050 None:intergenic 50.0%
TCCAACTACGGACGAAGTCA+AGG + Chr3:12888580-12888599 MsG0380012220.01.T01:CDS 50.0%
TCCTGCATCTCTACCTTGCT+AGG + Chr3:12890539-12890558 MsG0380012220.01.T01:intron 50.0%
TCTTCAACTTTGCTCGTGGC+CGG + Chr3:12888893-12888912 MsG0380012220.01.T01:CDS 50.0%
TTGCTCGTGGCCGGTTATTA+TGG + Chr3:12888902-12888921 MsG0380012220.01.T01:CDS 50.0%
! CATCCGGTGCTAATTAGGGA+CGG - Chr3:12890363-12890382 None:intergenic 50.0%
! CGCTCTAGCTTCGTTTCCTA+TGG + Chr3:12889222-12889241 MsG0380012220.01.T01:CDS 50.0%
!! CCATTCATACCGACTCCCAT+AGG - Chr3:12891215-12891234 None:intergenic 50.0%
!! CCGAAGTTTGCTGGTATAGG+AGG - Chr3:12890316-12890335 None:intergenic 50.0%
GCTCCGTCCCTAATTAGCAC+CGG + Chr3:12890357-12890376 MsG0380012220.01.T01:intron 55.0%
GGAAACGAAGCTAGAGCGCA+AGG - Chr3:12889220-12889239 None:intergenic 55.0%
TTCGGTTTACCCTTGGCCCA+CGG + Chr3:12890331-12890350 MsG0380012220.01.T01:intron 55.0%
TTGCTCGTGGCCAGTTTGCA+TGG + Chr3:12890873-12890892 MsG0380012220.01.T01:CDS 55.0%
!! GGAAGAAGTGTCCCAGAAGG+AGG - Chr3:12888611-12888630 None:intergenic 55.0%
!! GGTGGAAGAAGTGTCCCAGA+AGG - Chr3:12888614-12888633 None:intergenic 55.0%
TCGGTTTACCCTTGGCCCAC+GGG + Chr3:12890332-12890351 MsG0380012220.01.T01:intron 60.0%
CGGTTTACCCTTGGCCCACG+GGG + Chr3:12890333-12890352 MsG0380012220.01.T01:intron 65.0%
! ATTAGGGACGGAGCACCCCG+TGG - Chr3:12890351-12890370 None:intergenic 65.0%
! TTAGGGACGGAGCACCCCGT+GGG - Chr3:12890350-12890369 None:intergenic 65.0%
! ACGGAGCACCCCGTGGGCCA+AGG - Chr3:12890344-12890363 None:intergenic 75.0%
! CGGAGCACCCCGTGGGCCAA+GGG - Chr3:12890343-12890362 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 12888188 12891391 12888188 ID=MsG0380012220.01;Name=MsG0380012220.01
Chr3 mRNA 12888188 12891391 12888188 ID=MsG0380012220.01.T01;Parent=MsG0380012220.01;Name=MsG0380012220.01.T01;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|622
Chr3 exon 12888188 12889364 12888188 ID=MsG0380012220.01.T01:exon:412;Parent=MsG0380012220.01.T01
Chr3 exon 12890700 12891391 12890700 ID=MsG0380012220.01.T01:exon:413;Parent=MsG0380012220.01.T01
Chr3 CDS 12888188 12889364 12888188 ID=MsG0380012220.01.T01:cds;Parent=MsG0380012220.01.T01
Chr3 CDS 12890700 12891391 12890700 ID=MsG0380012220.01.T01:cds;Parent=MsG0380012220.01.T01
Gene Sequence

>MsG0380012220.01.T01

ATGGCTTCCAATTTCTGTAGCAGTGACATTGTAAGTGGAGGCTATATTCACAATGATATTGCCTTCTTTATTCTATCAAAGCTCCCGATTAAATCTTTGAAACGATTTGAATGCGTAAGTAAATCATGGTCTCGCTTTACTGAAGACTCTCTTTTCATGACAATGTATCGCAAAAATCTTCTTTTATCTCAATCTTATGACGGTGATACATCTCTCCTCGTAAATATCTGCTCTGACAGTAAAAAGTTCCATTTTCTATCAGGTGAAAGGTTTGAGAATTGGGTCAGTTTAATTTGTCCAGTTAAATCCTATCGTGCAGTTGAAATCAATGGCTTTGCGAGTGTTAATGGCATACTTTGTTTGAAACACTACAAAAGTTTCTCACTATGGAATCCAACTACGGACGAAGTCAAGGTTATTCCTCCTTCTGGGACACTTCTTCCACCTATTGTTCATAAATATAAGGCGGCGGATTACTTTCACCATCGCACTATGATTCATGGATTTGGTTATGACTCTATTGCTGATGACTATAAGGTGATTTGTCTTGAAACATTTGAATCATTATTCTTTAGTGATGATGAGCTAGCTATAGGCAAGAAATTACAATCATTGTTGTTGCAAGATGGATCCCTTCAACCCTTTTGGCAGATTTATAGCCTAAAAAGTAACTCGTGGAAGAAACTCTATGTCAATATGCCTCATTCTTCAACTTTGCTCGTGGCCGGTTATTATGGAAATTTCCGAGTGTATATGAATGGAGCGTGTCATTGGTTGTCTATGCCTCGTTGTCATTGGACTGTTCCTTTTTTTGCAGAAGCATGTATGGTATCATTTGACTTAAACAATGAGACATTCTTTGTCACACCCATACCATCGTACGTTAGACTGACATGGACACACTTGACAGTGTTGAATAATTCCATTGCCTTGATCTTCTTCTCTGTGAACTCAAATATTTTTCACATATCAATTTTGGGTGAATTTGGTGTGAAGGAATCATGGATCAAACTGTTCACTGTTGAAATACCTTGCGCTCTAGCTTCGTTTCCTATGGGGGTCGTTATGAATGGTGAAATAGTCTTTGCAAATGACGACAACAAACTACTTTTGTTTGATTTAAATACCAACAAGATTGTAGAGCTTGGACTTAAAATAAGAGATAGATTGACTCTTGGTATTTCATGCTCAAATTGTTTGGAACTCTTTTGTTGTTGCAATCATTGTTGTTGCAAGAAATTACAATCATTGTTGTTGCAAGATGAATCCCTTAAACCCTTTTGGCAGATTTATAGCCTAAAAAGTAACTCGTGGAAGAAACTCAATGTCAATATGCCTCATTCTTCAACTTTGCTCGTGGCCAGTTTGCATGGAAATTTCCGAGTGTATATGAATGGAGTGTGTCATTGGTTGTCTATGCCTCGTTGTCATTGGACTGTTCCTTTTTCTGCAGAAGCATGTATGGTATCATTTGACTTAAACAATGAGACGTTCTTTGTCACACCCCTACCCTCGTACGTTAGACTGACATGGACACAATTGACAGTGTTGAATAATTCCATTGCCTTGATCTTCTTCTCTATAATCACAAATATTTTTCACATATCAATTTTGGGTGAAGTTGGTGTGAAAGAATCATGGATCAAACTCTTCACTATTGAAAAACCTTGCGCTCTAGCTACGTTGTTTCCTATGGGAGTCGGTATGAATGGTGAAATAGTCTTTGCAAATGACGACAACAAACTACTTTTGTTTGATTTAAATACCAACAAGATTGTAGAGCTTGGACTTAAAATAAGAGATAAATTGACTCTTGGTCAGATTAAAGTTTACAAGAGAAGCCTTCTTCCAATCAAAAGAATAAATTAA

Protein sequence

>MsG0380012220.01.T01

MASNFCSSDIVSGGYIHNDIAFFILSKLPIKSLKRFECVSKSWSRFTEDSLFMTMYRKNLLLSQSYDGDTSLLVNICSDSKKFHFLSGERFENWVSLICPVKSYRAVEINGFASVNGILCLKHYKSFSLWNPTTDEVKVIPPSGTLLPPIVHKYKAADYFHHRTMIHGFGYDSIADDYKVICLETFESLFFSDDELAIGKKLQSLLLQDGSLQPFWQIYSLKSNSWKKLYVNMPHSSTLLVAGYYGNFRVYMNGACHWLSMPRCHWTVPFFAEACMVSFDLNNETFFVTPIPSYVRLTWTHLTVLNNSIALIFFSVNSNIFHISILGEFGVKESWIKLFTVEIPCALASFPMGVVMNGEIVFANDDNKLLLFDLNTNKIVELGLKIRDRLTLGISCSNCLELFCCCNHCCCKKLQSLLLQDESLKPFWQIYSLKSNSWKKLNVNMPHSSTLLVASLHGNFRVYMNGVCHWLSMPRCHWTVPFSAEACMVSFDLNNETFFVTPLPSYVRLTWTQLTVLNNSIALIFFSIITNIFHISILGEVGVKESWIKLFTIEKPCALATLFPMGVGMNGEIVFANDDNKLLLFDLNTNKIVELGLKIRDKLTLGQIKVYKRSLLPIKRIN*