AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007168.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007168.01.T01 MTR_2g021770 92.821 390 28 0 44 433 1 390 0.0 756
MsG0280007168.01.T01 MTR_2g021800 55.556 396 161 6 50 434 11 402 2.71e-143 425
MsG0280007168.01.T01 MTR_2g021950 57.403 385 144 7 49 429 10 378 9.55e-139 412
MsG0280007168.01.T01 MTR_2g022000 54.453 393 169 5 50 434 11 401 7.35e-137 409
MsG0280007168.01.T01 MTR_0129s0070 48.312 385 179 9 49 431 11 377 5.83e-106 328
MsG0280007168.01.T01 MTR_0129s0120 47.781 383 180 9 49 429 11 375 8.68e-102 317
MsG0280007168.01.T01 MTR_4g055820 44.809 366 184 6 47 406 6 359 1.32e-99 310
MsG0280007168.01.T01 MTR_2g038680 44.888 401 188 10 46 430 7 390 1.86e-99 311
MsG0280007168.01.T01 MTR_2g104340 45.736 387 186 9 49 429 8 376 4.65e-98 308
MsG0280007168.01.T01 MTR_7g069550 47.120 382 183 10 49 425 8 375 2.42e-96 303
MsG0280007168.01.T01 MTR_0129s0050 45.113 399 188 12 49 432 8 390 1.04e-94 299
MsG0280007168.01.T01 MTR_8g041270 43.990 391 196 8 49 429 9 386 2.98e-93 295
MsG0280007168.01.T01 MTR_6g090180 43.939 396 200 8 40 426 32 414 7.69e-93 295
MsG0280007168.01.T01 MTR_8g063440 44.560 386 188 12 44 428 1 361 1.14e-92 293
MsG0280007168.01.T01 MTR_3g011120 44.444 387 174 14 49 429 8 359 1.19e-91 290
MsG0280007168.01.T01 MTR_6g086825 44.301 386 182 9 54 425 69 435 1.36e-90 290
MsG0280007168.01.T01 MTR_4g102410 42.416 389 206 10 48 430 54 430 2.04e-90 289
MsG0280007168.01.T01 MTR_7g017130 44.072 388 187 10 49 429 12 376 1.68e-89 285
MsG0280007168.01.T01 MTR_8g464770 42.894 387 192 9 44 429 1 359 3.44e-89 284
MsG0280007168.01.T01 MTR_2g064950 44.764 382 184 10 49 424 4 364 4.77e-89 284
MsG0280007168.01.T01 MTR_5g097330 43.577 397 193 10 44 429 5 381 8.81e-89 283
MsG0280007168.01.T01 MTR_7g017170 42.532 395 197 9 49 436 12 383 9.10e-89 284
MsG0280007168.01.T01 MTR_0831s0010 41.944 391 193 9 46 430 39 401 1.17e-88 284
MsG0280007168.01.T01 MTR_4g117550 42.782 381 179 7 49 429 11 352 3.10e-88 281
MsG0280007168.01.T01 MTR_5g096630 41.748 412 203 11 38 430 1 394 3.31e-88 282
MsG0280007168.01.T01 MTR_5g097220 41.935 403 196 10 46 430 4 386 1.01e-87 281
MsG0280007168.01.T01 MTR_0134s0060 43.521 409 182 13 44 425 1 387 3.41e-87 280
MsG0280007168.01.T01 MTR_1g007410 45.103 388 190 12 48 429 15 385 1.65e-86 278
MsG0280007168.01.T01 MTR_2g104280 43.216 398 187 10 50 429 9 385 3.40e-86 277
MsG0280007168.01.T01 MTR_6g080680 41.235 405 189 10 41 430 5 375 2.77e-85 274
MsG0280007168.01.T01 MTR_6g079770 43.951 405 194 11 40 425 2 392 4.46e-85 274
MsG0280007168.01.T01 MTR_5g037680 43.557 388 174 11 54 427 7 363 7.73e-85 275
MsG0280007168.01.T01 MTR_5g072060 44.855 379 170 8 52 425 3 347 7.50e-84 277
MsG0280007168.01.T01 MTR_6g461660 41.500 400 197 13 48 434 12 387 3.29e-83 269
MsG0280007168.01.T01 MTR_5g069390 41.045 402 200 13 41 424 9 391 4.30e-83 272
MsG0280007168.01.T01 MTR_5g097680 41.148 418 199 13 46 431 8 410 2.05e-82 268
MsG0280007168.01.T01 MTR_0054s0090 41.975 405 179 15 46 425 8 381 2.75e-81 264
MsG0280007168.01.T01 MTR_2g021920 59.729 221 87 1 211 429 34 254 3.25e-81 259
MsG0280007168.01.T01 MTR_8g064890 41.842 380 186 10 52 425 13 363 3.49e-81 263
MsG0280007168.01.T01 MTR_0054s0100 41.832 404 183 14 46 425 8 383 3.59e-81 264
MsG0280007168.01.T01 MTR_8g012090 39.896 386 162 7 46 419 7 334 1.07e-80 260
MsG0280007168.01.T01 MTR_7g079640 40.409 391 185 11 46 428 4 354 2.33e-80 261
MsG0280007168.01.T01 MTR_8g467670 40.000 380 190 10 54 429 13 358 7.86e-80 259
MsG0280007168.01.T01 MTR_4g028510 42.750 400 164 16 55 426 16 378 8.26e-80 262
MsG0280007168.01.T01 MTR_5g097350 40.431 371 190 10 65 431 26 369 1.80e-79 258
MsG0280007168.01.T01 MTR_8g013000 42.623 366 191 9 49 410 4 354 4.33e-79 258
MsG0280007168.01.T01 MTR_5g059430 39.512 410 210 14 41 427 9 403 5.14e-79 259
MsG0280007168.01.T01 MTR_1g007450 43.367 392 199 11 44 429 1 375 7.52e-79 258
MsG0280007168.01.T01 MTR_2g034700 41.710 386 172 13 54 429 13 355 3.30e-78 255
MsG0280007168.01.T01 MTR_4g028660 41.131 389 185 14 54 426 15 375 1.04e-77 254
MsG0280007168.01.T01 MTR_4g027450 41.131 389 185 14 54 426 15 375 1.04e-77 254
MsG0280007168.01.T01 MTR_6g478230 41.013 395 172 9 54 425 26 382 2.10e-77 254
MsG0280007168.01.T01 MTR_4g028680 40.769 390 190 12 54 428 15 378 4.33e-77 253
MsG0280007168.01.T01 MTR_5g074800 45.104 337 163 8 94 425 1 320 5.46e-77 250
MsG0280007168.01.T01 MTR_7g017040 41.206 398 194 12 48 431 9 380 7.60e-77 252
MsG0280007168.01.T01 MTR_5g091140 39.401 401 201 9 30 424 26 390 1.80e-75 249
MsG0280007168.01.T01 MTR_4g130330 41.131 389 183 13 54 425 6 365 5.29e-75 247
MsG0280007168.01.T01 MTR_6g079810 41.247 417 199 17 36 429 49 442 3.07e-74 247
MsG0280007168.01.T01 MTR_4g014370 39.277 415 197 13 46 431 2 390 2.87e-73 243
MsG0280007168.01.T01 MTR_2g066170 38.677 393 206 11 44 429 1 365 3.15e-73 242
MsG0280007168.01.T01 MTR_5g022850 40.000 390 169 7 44 429 5 333 3.62e-73 241
MsG0280007168.01.T01 MTR_2g066200 39.394 396 193 15 44 425 1 363 1.05e-72 241
MsG0280007168.01.T01 MTR_8g039500 40.365 384 183 11 44 419 1 346 1.51e-71 236
MsG0280007168.01.T01 MTR_1g007430 43.103 348 166 10 59 403 1 319 6.13e-71 234
MsG0280007168.01.T01 MTR_5g024260 38.422 393 195 14 54 428 21 384 6.19e-71 237
MsG0280007168.01.T01 MTR_8g046310 39.175 388 181 14 54 430 15 358 1.05e-70 235
MsG0280007168.01.T01 MTR_4g028750 39.394 396 192 15 48 425 8 373 8.24e-70 233
MsG0280007168.01.T01 MTR_6g090250 39.175 388 184 12 73 425 29 399 3.67e-69 232
MsG0280007168.01.T01 MTR_5g074850 40.863 394 193 18 49 425 29 399 3.80e-69 243
MsG0280007168.01.T01 MTR_4g007940 39.118 340 166 9 107 429 6 321 2.35e-67 225
MsG0280007168.01.T01 MTR_1g053510 37.817 394 205 11 54 429 14 385 6.20e-67 226
MsG0280007168.01.T01 MTR_8g033140 36.077 413 219 13 41 429 5 396 1.12e-66 226
MsG0280007168.01.T01 MTR_5g096910 40.310 387 173 15 58 425 20 367 1.32e-66 224
MsG0280007168.01.T01 MTR_2g065860 38.442 398 204 13 44 430 1 368 2.14e-66 224
MsG0280007168.01.T01 MTR_5g092860 41.114 377 150 16 73 425 20 348 1.16e-65 221
MsG0280007168.01.T01 MTR_5g092850 37.563 394 197 15 54 428 15 378 2.07e-65 222
MsG0280007168.01.T01 MTR_8g046200 37.647 425 202 13 44 429 1 401 2.45e-65 222
MsG0280007168.01.T01 MTR_5g075370 37.560 418 208 16 54 446 7 396 2.84e-65 231
MsG0280007168.01.T01 MTR_8g063330 38.070 373 195 11 44 405 1 348 1.02e-64 222
MsG0280007168.01.T01 MTR_8g032980 37.046 413 192 14 54 427 15 398 2.24e-64 219
MsG0280007168.01.T01 MTR_8g033090 37.905 401 202 14 54 429 13 391 7.12e-64 218
MsG0280007168.01.T01 MTR_7g111700 38.481 395 161 11 54 429 14 345 9.26e-64 216
MsG0280007168.01.T01 MTR_8g046220 35.337 416 211 11 40 429 2 385 1.45e-63 217
MsG0280007168.01.T01 MTR_1g098180 36.750 400 179 14 41 427 5 343 9.84e-63 213
MsG0280007168.01.T01 MTR_5g064700 37.808 365 182 11 96 431 3 351 1.25e-62 213
MsG0280007168.01.T01 MTR_8g064790 37.760 384 162 9 48 429 8 316 1.35e-62 212
MsG0280007168.01.T01 MTR_8g033110 37.000 400 210 14 54 429 13 394 2.78e-62 214
MsG0280007168.01.T01 MTR_2g065840 36.000 400 206 13 44 428 1 365 7.03e-61 209
MsG0280007168.01.T01 MTR_7g026095 68.056 144 45 1 503 646 27 169 3.33e-60 206
MsG0280007168.01.T01 MTR_2g066150 37.824 386 185 12 44 425 1 335 5.88e-59 203
MsG0280007168.01.T01 MTR_6g078010 37.644 348 165 11 92 425 1 310 7.64e-59 202
MsG0280007168.01.T01 MTR_7g016930 38.710 341 161 9 46 381 7 304 9.90e-58 199
MsG0280007168.01.T01 MTR_8g018110 34.739 403 197 15 54 429 13 376 8.55e-56 196
MsG0280007168.01.T01 MTR_5g086590 41.935 248 115 7 178 422 10 231 7.62e-54 185
MsG0280007168.01.T01 MTR_8g036970 33.967 368 172 8 63 429 6 303 9.98e-53 186
MsG0280007168.01.T01 MTR_6g079790 37.748 302 160 7 145 431 2 290 6.06e-52 182
MsG0280007168.01.T01 MTR_7g104710 36.578 339 151 11 38 365 1 286 1.24e-51 182
MsG0280007168.01.T01 MTR_1g050308 32.518 409 180 12 29 428 7 328 1.20e-50 180
MsG0280007168.01.T01 MTR_3g093120 47.486 179 92 2 502 680 313 489 2.44e-50 184
MsG0280007168.01.T01 MTR_2g104260 40.893 291 137 10 49 325 8 277 4.16e-50 176
MsG0280007168.01.T01 MTR_6g087620 35.855 304 143 6 133 425 1 263 1.29e-48 172
MsG0280007168.01.T01 MTR_6g004450 44.144 222 94 7 215 429 50 248 1.47e-48 172
MsG0280007168.01.T01 MTR_6g070880 39.326 267 130 11 36 286 13 263 1.07e-46 166
MsG0280007168.01.T01 MTR_6g071420 39.326 267 130 11 36 286 13 263 1.07e-46 166
MsG0280007168.01.T01 MTR_5g096900 37.714 350 161 15 44 373 1 313 1.11e-46 168
MsG0280007168.01.T01 MTR_5g097820 39.689 257 122 7 54 302 22 253 1.58e-46 166
MsG0280007168.01.T01 MTR_5g094350 37.785 307 129 14 51 334 9 276 1.81e-46 166
MsG0280007168.01.T01 MTR_8g063370 31.378 392 215 16 46 426 19 367 2.67e-46 169
MsG0280007168.01.T01 MTR_5g076490 36.648 352 171 12 92 429 1 314 8.95e-46 166
MsG0280007168.01.T01 MTR_5g068490 37.586 290 141 11 142 429 6 257 3.08e-45 163
MsG0280007168.01.T01 MTR_5g043605 38.591 298 140 14 143 429 54 319 1.09e-43 161
MsG0280007168.01.T01 MTR_8g063350 29.427 384 183 13 55 426 14 321 1.22e-43 160
MsG0280007168.01.T01 MTR_7g023800 34.188 351 147 13 94 425 1 286 3.49e-43 158
MsG0280007168.01.T01 MTR_1g050312 37.255 306 134 14 133 428 16 273 1.67e-42 155
MsG0280007168.01.T01 MTR_8g063310 30.155 388 227 15 50 425 17 372 1.87e-42 159
MsG0280007168.01.T01 MTR_6g090260 49.112 169 79 3 260 425 73 237 2.17e-42 154
MsG0280007168.01.T01 MTR_6g090260 47.761 67 34 1 39 104 3 69 1.52e-11 65.9
MsG0280007168.01.T01 MTR_5g037190 37.770 278 129 7 49 319 10 250 2.47e-42 154
MsG0280007168.01.T01 MTR_6g009350 42.718 206 92 8 215 413 9 195 4.08e-40 146
MsG0280007168.01.T01 MTR_8g033000 32.615 371 188 13 92 429 1 342 8.20e-40 150
MsG0280007168.01.T01 MTR_3g018750 41.410 227 107 9 212 425 1 214 1.14e-39 146
MsG0280007168.01.T01 MTR_4g016000 38.889 216 102 7 186 399 2 189 1.54e-39 145
MsG0280007168.01.T01 MTR_5g097850 46.591 176 74 5 267 432 63 228 9.49e-39 144
MsG0280007168.01.T01 MTR_8g073570 43.407 182 91 5 44 225 1 170 1.56e-38 140
MsG0280007168.01.T01 MTR_6g465360 39.326 267 130 12 22 270 29 281 2.22e-38 144
MsG0280007168.01.T01 MTR_2g075320 41.579 190 79 2 503 692 102 259 2.24e-38 145
MsG0280007168.01.T01 MTR_5g023970 45.506 178 91 4 254 430 3 175 3.01e-38 141
MsG0280007168.01.T01 MTR_1g076810 40.678 236 115 8 46 277 9 223 3.00e-37 148
MsG0280007168.01.T01 MTR_5g098950 37.662 231 97 6 182 409 89 275 2.79e-35 135
MsG0280007168.01.T01 MTR_7g019250 36.667 240 113 6 195 427 206 413 1.57e-33 135
MsG0280007168.01.T01 MTR_4g014370 41.011 178 94 5 257 431 149 318 4.40e-31 125
MsG0280007168.01.T01 MTR_4g014370 43.077 130 68 3 46 174 13 137 1.92e-21 96.7
MsG0280007168.01.T01 MTR_1g115205 34.717 265 112 9 46 302 24 235 1.87e-30 120
MsG0280007168.01.T01 MTR_7g017120 42.781 187 95 6 256 438 75 253 4.01e-30 120
MsG0280007168.01.T01 MTR_7g017150 42.781 187 95 6 256 438 76 254 4.39e-30 120
MsG0280007168.01.T01 MTR_5g066420 43.796 137 72 1 296 427 1 137 7.16e-30 115
MsG0280007168.01.T01 MTR_6g079730 54.310 116 48 2 312 425 13 125 2.94e-29 114
MsG0280007168.01.T01 MTR_5g097650 42.857 147 68 2 53 199 20 150 9.11e-29 112
MsG0280007168.01.T01 MTR_8g035690 34.118 255 133 9 192 425 38 278 1.09e-27 114
MsG0280007168.01.T01 MTR_6g472230 35.503 169 108 1 510 678 1 168 2.35e-27 119
MsG0280007168.01.T01 MTR_3g019290 33.043 230 97 7 44 268 1 178 2.37e-27 109
MsG0280007168.01.T01 MTR_5g097540 39.726 146 78 3 262 407 97 232 2.27e-26 110
MsG0280007168.01.T01 MTR_3g030620 44.000 150 76 5 293 436 20 167 1.60e-25 104
MsG0280007168.01.T01 MTR_1g047080 29.769 346 153 15 92 430 1 263 3.77e-25 106
MsG0280007168.01.T01 MTR_5g096920 41.985 131 71 3 296 425 1 127 1.19e-24 100
MsG0280007168.01.T01 MTR_5g096070 38.202 178 66 6 52 222 19 159 1.24e-24 101
MsG0280007168.01.T01 MTR_2g022020 54.737 95 41 2 341 434 14 107 1.44e-24 99.4
MsG0280007168.01.T01 MTR_3g034130 28.389 391 223 18 47 424 1 347 2.20e-24 105
MsG0280007168.01.T01 MTR_4g023080 28.535 389 192 17 47 413 1 325 3.75e-24 105
MsG0280007168.01.T01 MTR_7g101200 35.043 234 108 13 180 409 37 230 6.24e-24 101
MsG0280007168.01.T01 MTR_6g060522 54.444 90 41 0 603 692 2 91 9.50e-24 99.8
MsG0280007168.01.T01 MTR_5g091150 31.963 219 91 6 142 356 20 184 1.18e-23 99.8
MsG0280007168.01.T01 MTR_4g023090 28.065 367 199 15 49 403 10 323 1.31e-23 103
MsG0280007168.01.T01 MTR_4g133170 26.196 397 224 15 58 439 7 349 2.71e-23 103
MsG0280007168.01.T01 MTR_6g060910 48.387 93 48 0 534 626 32 124 4.17e-23 95.5
MsG0280007168.01.T01 MTR_4g116330 27.577 359 209 13 49 403 17 328 8.16e-23 101
MsG0280007168.01.T01 MTR_3g452820 33.149 181 80 4 502 682 21 160 1.13e-22 96.3
MsG0280007168.01.T01 MTR_3g034180 27.735 393 222 18 47 424 115 460 1.77e-22 102
MsG0280007168.01.T01 MTR_4g021785 27.692 390 209 17 47 424 1 329 4.39e-22 99.0
MsG0280007168.01.T01 MTR_5g086780 40.678 118 69 1 308 425 111 227 1.18e-21 94.7
MsG0280007168.01.T01 MTR_5g086780 56.897 58 23 1 44 99 5 62 4.64e-13 69.7
MsG0280007168.01.T01 MTR_2g021150 28.869 336 191 15 58 389 17 308 2.07e-21 97.1
MsG0280007168.01.T01 MTR_2g024110 25.298 336 196 12 58 386 7 294 1.74e-20 94.4
MsG0280007168.01.T01 MTR_8g041440 50.588 85 37 1 48 127 8 92 5.17e-20 86.3
MsG0280007168.01.T01 MTR_7g056567 47.826 92 48 0 601 692 15 106 7.61e-20 87.4
MsG0280007168.01.T01 MTR_5g096050 41.748 103 45 3 296 385 1 101 1.53e-19 85.1
MsG0280007168.01.T01 MTR_8g011410 32.653 196 107 5 480 672 762 935 3.64e-19 92.8
MsG0280007168.01.T01 MTR_4g122850 28.134 359 190 16 61 403 7 313 4.20e-19 90.5
MsG0280007168.01.T01 MTR_5g057790 25.872 344 185 15 58 389 49 334 7.22e-19 89.7
MsG0280007168.01.T01 MTR_5g036250 48.837 86 44 0 345 430 7 92 7.87e-19 85.5
MsG0280007168.01.T01 MTR_1g058200 44.706 85 47 0 537 621 55 139 8.11e-19 84.3
MsG0280007168.01.T01 MTR_2g021860 38.889 126 69 4 143 261 13 137 8.36e-19 84.0
MsG0280007168.01.T01 MTR_4g109280 27.177 379 219 12 49 423 2 327 1.60e-18 88.2
MsG0280007168.01.T01 MTR_4g117770 27.926 376 206 16 54 413 10 336 2.16e-18 88.2
MsG0280007168.01.T01 MTR_4g117810 27.926 376 206 16 54 413 10 336 2.16e-18 88.2
MsG0280007168.01.T01 MTR_1g055135 29.204 339 192 15 54 387 12 307 2.64e-18 87.8
MsG0280007168.01.T01 MTR_2g055970 27.020 396 215 19 58 436 214 552 2.92e-18 89.4
MsG0280007168.01.T01 MTR_5g070130 26.396 394 217 20 44 413 1 345 6.06e-18 87.0
MsG0280007168.01.T01 MTR_5g057710 25.714 350 186 14 58 393 49 338 8.63e-18 86.7
MsG0280007168.01.T01 MTR_4g023070 26.970 330 193 12 58 385 6 289 9.47e-18 86.3
MsG0280007168.01.T01 MTR_4g094400 38.583 127 51 4 293 404 7 121 1.11e-17 80.5
MsG0280007168.01.T01 MTR_5g070080 27.110 391 201 18 58 413 13 354 1.48e-17 85.9
MsG0280007168.01.T01 MTR_5g010560 25.814 430 215 21 22 394 9 391 1.61e-17 86.3
MsG0280007168.01.T01 MTR_7g070440 25.397 378 206 14 55 407 7 333 1.70e-17 85.5
MsG0280007168.01.T01 MTR_5g097660 47.917 96 48 2 333 427 3 97 2.05e-17 79.3
MsG0280007168.01.T01 MTR_0667s0010 24.269 342 201 11 58 385 9 306 2.90e-17 85.1
MsG0280007168.01.T01 MTR_2g031720 24.352 386 233 16 57 429 8 347 4.66e-17 84.3
MsG0280007168.01.T01 MTR_3g034160 26.786 392 226 15 47 423 1 346 6.37e-17 83.6
MsG0280007168.01.T01 MTR_8g032390 25.313 399 219 17 19 410 7 333 9.86e-17 83.2
MsG0280007168.01.T01 MTR_5g049560 39.216 153 72 5 92 229 1 147 1.07e-16 81.3
MsG0280007168.01.T01 MTR_6g027910 24.474 380 224 17 47 413 1 330 1.48e-16 82.4
MsG0280007168.01.T01 MTR_4g117750 29.023 348 181 18 68 403 16 309 1.52e-16 83.6
MsG0280007168.01.T01 MTR_6g033925 38.793 116 67 2 501 616 24 135 2.67e-16 79.0
MsG0280007168.01.T01 MTR_1g068835 25.298 336 192 14 58 385 7 291 3.33e-16 81.6
MsG0280007168.01.T01 MTR_3g083010 25.210 357 196 16 58 386 9 322 3.43e-16 82.0
MsG0280007168.01.T01 MTR_4g023150 26.471 374 210 14 49 413 4 321 3.44e-16 81.3
MsG0280007168.01.T01 MTR_8g101580 24.157 356 208 12 63 413 54 352 3.72e-16 81.6
MsG0280007168.01.T01 MTR_4g023120 26.506 332 192 11 58 385 6 289 3.82e-16 81.3
MsG0280007168.01.T01 MTR_4g117780 26.203 374 207 14 58 413 14 336 4.11e-16 81.3
MsG0280007168.01.T01 MTR_4g116340 28.137 263 131 12 58 316 39 247 4.35e-16 79.0
MsG0280007168.01.T01 MTR_2g028110 26.289 388 215 18 63 433 12 345 5.32e-16 80.9
MsG0280007168.01.T01 MTR_8g467140 25.429 350 204 12 42 385 19 317 6.46e-16 80.1
MsG0280007168.01.T01 MTR_2g028130 24.438 356 193 14 58 385 8 315 6.50e-16 80.9
MsG0280007168.01.T01 MTR_3g014540 25.436 401 213 18 55 435 29 363 7.58e-16 80.5
MsG0280007168.01.T01 MTR_2g028140 25.140 358 208 19 51 385 1 321 1.10e-15 80.5
MsG0280007168.01.T01 MTR_4g061340 28.406 345 180 19 58 389 29 319 1.20e-15 79.7
MsG0280007168.01.T01 MTR_3g006670 25.474 369 188 15 58 404 52 355 1.62e-15 79.7
MsG0280007168.01.T01 MTR_7g407070 26.857 350 209 15 45 383 22 335 1.66e-15 79.7
MsG0280007168.01.T01 MTR_4g023200 26.479 355 196 14 69 414 24 322 2.07e-15 79.0
MsG0280007168.01.T01 MTR_8g059225 34.343 99 64 1 582 680 75 172 2.26e-15 75.1
MsG0280007168.01.T01 MTR_4g023190 26.455 378 204 14 49 413 4 320 2.33e-15 78.6
MsG0280007168.01.T01 MTR_4g023130 29.317 249 120 10 185 421 80 284 2.80e-15 77.8
MsG0280007168.01.T01 MTR_3g103020 25.134 374 221 14 58 421 23 347 5.27e-15 77.8
MsG0280007168.01.T01 MTR_4g116330 28.384 229 123 7 49 277 17 204 5.50e-15 77.4
MsG0280007168.01.T01 MTR_0044s0300 25.740 338 178 14 58 383 41 317 9.51e-15 77.0
MsG0280007168.01.T01 MTR_8g028915 72.727 44 12 0 1 44 3 46 2.00e-14 68.6
MsG0280007168.01.T01 MTR_2g025420 25.140 358 203 16 63 395 14 331 2.43e-14 76.3
MsG0280007168.01.T01 MTR_4g024890 25.360 347 190 14 58 385 13 309 2.59e-14 75.9
MsG0280007168.01.T01 MTR_2g426070 24.121 398 231 16 58 429 9 361 2.88e-14 75.9
MsG0280007168.01.T01 MTR_2g021155 27.042 355 202 13 45 394 26 328 3.44e-14 77.0
MsG0280007168.01.T01 MTR_3g058480 25.857 321 191 12 58 369 42 324 3.89e-14 74.7
MsG0280007168.01.T01 MTR_6g048120 26.608 342 183 13 58 383 39 328 4.51e-14 75.1
MsG0280007168.01.T01 MTR_3g047580 29.801 151 72 4 49 195 7 127 5.78e-14 69.7
MsG0280007168.01.T01 MTR_3g013770 24.242 363 180 14 58 394 36 329 5.88e-14 74.7
MsG0280007168.01.T01 MTR_1g068875 22.359 407 240 17 58 445 7 356 5.93e-14 74.7
MsG0280007168.01.T01 MTR_2g029990 25.225 333 192 13 58 383 54 336 5.99e-14 74.7
MsG0280007168.01.T01 MTR_3g013740 23.958 384 233 16 42 413 31 367 6.27e-14 74.7
MsG0280007168.01.T01 MTR_2g046920 24.103 390 203 19 58 415 27 355 6.79e-14 74.3
MsG0280007168.01.T01 MTR_1g068860 25.369 339 190 14 58 385 7 293 7.68e-14 74.3
MsG0280007168.01.T01 MTR_3g009240 26.706 337 179 17 58 385 39 316 9.37e-14 73.9
MsG0280007168.01.T01 MTR_1g097330 25.575 348 194 14 46 385 7 297 1.12e-13 73.9
MsG0280007168.01.T01 MTR_7g013590 26.437 348 196 15 58 396 39 335 1.24e-13 73.9
MsG0280007168.01.T01 MTR_3g010970 24.545 330 187 13 58 385 51 320 1.44e-13 73.6
MsG0280007168.01.T01 MTR_6g048140 26.184 359 167 16 58 388 42 330 1.63e-13 73.6
MsG0280007168.01.T01 MTR_3g058470 29.661 236 117 10 58 281 40 238 1.85e-13 73.2
MsG0280007168.01.T01 MTR_7g029010 75.610 41 10 0 1 41 1 41 1.88e-13 65.9
MsG0280007168.01.T01 MTR_0128s0020 25.698 358 202 14 42 383 8 317 2.01e-13 73.2
MsG0280007168.01.T01 MTR_7g078040 24.496 347 222 10 58 385 12 337 2.13e-13 73.2
MsG0280007168.01.T01 MTR_2g024100 22.917 336 188 11 70 383 22 308 2.20e-13 73.2
MsG0280007168.01.T01 MTR_1g050305 44.444 90 45 2 351 435 21 110 2.35e-13 68.2
MsG0280007168.01.T01 MTR_2g426020 23.631 347 198 14 58 385 9 307 3.79e-13 72.4
MsG0280007168.01.T01 MTR_0242s0060 25.937 347 206 14 57 385 11 324 4.11e-13 72.4
MsG0280007168.01.T01 MTR_0242s0040 25.937 347 206 14 57 385 11 324 4.11e-13 72.4
MsG0280007168.01.T01 MTR_6g053240 23.754 341 192 13 58 383 31 318 4.24e-13 72.0
MsG0280007168.01.T01 MTR_1g097490 25.199 377 222 15 53 423 47 369 6.67e-13 71.6
MsG0280007168.01.T01 MTR_1g051400 29.167 120 82 2 525 644 55 171 7.23e-13 67.8
MsG0280007168.01.T01 MTR_6g034845 71.429 42 12 0 2 43 3 44 7.86e-13 67.0
MsG0280007168.01.T01 MTR_2g021050 26.923 390 202 21 63 433 13 338 8.93e-13 70.9
MsG0280007168.01.T01 MTR_6g060650 25.840 387 230 16 49 423 2 343 1.03e-12 70.9
MsG0280007168.01.T01 MTR_2g426060 22.989 348 204 13 58 385 9 312 1.04e-12 70.9
MsG0280007168.01.T01 MTR_3g058440 24.415 299 169 11 58 344 38 291 1.32e-12 69.7
MsG0280007168.01.T01 MTR_3g097190 55.556 54 24 0 370 423 28 81 1.60e-12 67.0
MsG0280007168.01.T01 MTR_3g036335 24.093 386 209 19 58 430 44 358 1.63e-12 70.1
MsG0280007168.01.T01 MTR_4g070550 23.615 343 202 15 63 385 13 315 2.13e-12 70.1
MsG0280007168.01.T01 MTR_6g017280 25.568 352 187 15 58 385 12 312 2.77e-12 69.7
MsG0280007168.01.T01 MTR_1g064310 67.442 43 14 0 1 43 1 43 2.88e-12 63.5
MsG0280007168.01.T01 MTR_2g026010 25.279 269 163 12 167 419 91 337 3.80e-12 69.3
MsG0280007168.01.T01 MTR_4g030830 24.011 354 196 14 57 385 11 316 3.81e-12 69.3
MsG0280007168.01.T01 MTR_2g025960 26.230 244 130 14 167 390 6 219 4.08e-12 68.2
MsG0280007168.01.T01 MTR_5g010660 26.023 342 176 16 59 386 38 316 4.74e-12 69.3
MsG0280007168.01.T01 MTR_4g031770 26.970 330 186 18 58 382 7 286 9.18e-12 67.8
MsG0280007168.01.T01 MTR_4g055060 26.822 343 182 19 58 385 33 321 9.48e-12 67.8
MsG0280007168.01.T01 MTR_0128s0070 25.826 333 185 15 67 383 34 320 9.92e-12 67.8
MsG0280007168.01.T01 MTR_4g118380 27.105 380 231 17 49 416 2 347 1.01e-11 67.4
MsG0280007168.01.T01 MTR_2g028160 22.191 356 203 15 58 385 8 317 1.34e-11 67.4
MsG0280007168.01.T01 MTR_4g019020 28.481 158 91 3 502 659 136 271 1.76e-11 65.9
MsG0280007168.01.T01 MTR_2g425980 24.384 406 228 18 58 433 8 364 2.08e-11 67.0
MsG0280007168.01.T01 MTR_6g053260 24.036 337 191 16 58 383 340 622 2.15e-11 67.8
MsG0280007168.01.T01 MTR_6g004660 26.023 342 191 14 59 385 20 314 2.30e-11 66.6
MsG0280007168.01.T01 MTR_1g009110 24.533 375 224 17 53 413 12 341 2.94e-11 66.2
MsG0280007168.01.T01 MTR_6g087660 35.294 119 70 4 46 161 8 122 4.37e-11 63.2
MsG0280007168.01.T01 MTR_2g426090 23.464 358 188 15 58 385 9 310 4.39e-11 65.9
MsG0280007168.01.T01 MTR_8g102520 25.703 249 141 11 182 415 73 292 5.01e-11 65.1
MsG0280007168.01.T01 MTR_4g013185 24.384 365 199 16 58 385 13 337 5.26e-11 65.9
MsG0280007168.01.T01 MTR_5g069760 24.646 353 184 17 58 387 9 302 6.34e-11 65.1
MsG0280007168.01.T01 MTR_7g056290 23.901 364 188 15 58 385 25 335 6.91e-11 65.5
MsG0280007168.01.T01 MTR_5g057643 29.050 179 96 8 58 228 49 204 7.08e-11 63.9
MsG0280007168.01.T01 MTR_5g048160 24.031 387 222 16 58 413 7 352 9.69e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007168.01.T01 AT4G23160 38.710 279 124 2 447 679 277 554 1.25e-53 200
MsG0280007168.01.T01 AT4G23160 38.710 279 124 2 447 679 277 554 1.25e-53 200
MsG0280007168.01.T01 AT3G16210 25.507 345 171 13 53 387 3 271 1.11e-18 89.0
MsG0280007168.01.T01 AT3G06240 23.544 395 247 13 58 429 39 401 8.06e-16 80.9
MsG0280007168.01.T01 AT3G17490 21.984 373 228 11 54 416 5 324 2.91e-13 72.8

Find 137 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTGGTGATGTTATTTAA+TGG 0.180779 2:-11376495 MsG0280007168.01.T01:CDS
TCCACGTTCCCGACGGGTTC+GGG 0.226974 2:+11378214 None:intergenic
AACTGTTATCCACTTATTCT+TGG 0.255646 2:-11376903 MsG0280007168.01.T01:CDS
ATCTTAAACTCCTTGGTAGA+TGG 0.261564 2:+11376966 None:intergenic
TGAACTAAGTTTCCATGATT+TGG 0.261781 2:-11376823 MsG0280007168.01.T01:CDS
ATAAAATCTTTGAAGCGATT+TGG 0.272283 2:-11377320 MsG0280007168.01.T01:CDS
AGAACTTGTATGCTTTGATT+TGG 0.281112 2:-11376295 MsG0280007168.01.T01:CDS
CAACAAGCTCTTCGATCATT+AGG 0.283468 2:+11376268 None:intergenic
CTAGAGTTGTAGTACATTAC+AGG 0.306623 2:-11374674 MsG0280007168.01.T01:CDS
TGATTTGGCCATTCGTGGTT+TGG 0.325352 2:-11376808 MsG0280007168.01.T01:CDS
TCACTTCCATTTCAATATCT+TGG 0.328502 2:-11377077 MsG0280007168.01.T01:CDS
GATAAATTAATCTCCTTATA+AGG 0.341679 2:+11374760 None:intergenic
ATCCACGTTCCCGACGGGTT+CGG 0.343898 2:+11378213 None:intergenic
GAACTTGTATGCTTTGATTT+GGG 0.347526 2:-11376294 MsG0280007168.01.T01:CDS
ATTGACCGATTCTATATAGA+TGG 0.368813 2:-11376654 MsG0280007168.01.T01:CDS
ATCTATGCACCGGAAGAAAT+AGG 0.375480 2:+11374207 None:intergenic
CTCAGTATAGGAGCCTTATA+AGG 0.381192 2:-11374773 MsG0280007168.01.T01:intron
TAGACTATATATCTCCCATA+TGG 0.382640 2:+11376746 None:intergenic
ATTCTTTGTGTTTCTGATAG+AGG 0.383607 2:-11377014 MsG0280007168.01.T01:CDS
TATATAGAATCGGTCAATAT+AGG 0.397964 2:+11376659 None:intergenic
TTGAAGCCACTACAACTTAT+CGG 0.398550 2:-11376926 MsG0280007168.01.T01:CDS
TTTCTCATCTCCGTTGGGTA+TGG 0.400265 2:-11378181 MsG0280007168.01.T01:CDS
TGAGGCCGAGTATCGGGCTT+TGG 0.403229 2:-11374436 MsG0280007168.01.T01:CDS
GCCATTCTTCCCTCCTCCAA+TGG 0.403575 2:+11376344 None:intergenic
TGATGTGTTTGGTACATTCA+TGG 0.403828 2:+11374286 None:intergenic
TATGGGAGATATATAGTCTA+AGG 0.405147 2:-11376743 MsG0280007168.01.T01:CDS
AAAACTGATTTATCTCTCTC+TGG 0.414938 2:-11374588 MsG0280007168.01.T01:CDS
TATCCACTTATTCTTGGATT+CGG 0.415938 2:-11376897 MsG0280007168.01.T01:CDS
TAGGATCATCTTTGGTCTCA+TGG 0.416801 2:-11374497 MsG0280007168.01.T01:CDS
TGATTTAGAAGAAACTTGTT+TGG 0.422244 2:-11376607 MsG0280007168.01.T01:CDS
CCATTCTTCCCTCCTCCAAT+GGG 0.426599 2:+11376345 None:intergenic
ATATATCATATCAACCCATA+TGG 0.435552 2:-11376761 MsG0280007168.01.T01:CDS
TTGGTACATTCATGGAAAGT+TGG 0.440838 2:+11374294 None:intergenic
TTCCATGATTTGGCCATTCG+TGG 0.443537 2:-11376813 MsG0280007168.01.T01:CDS
AACAAGCTCTTCGATCATTA+GGG 0.446702 2:+11376269 None:intergenic
GTTAAATTTCTCATCTCCGT+TGG 0.447132 2:-11378187 MsG0280007168.01.T01:CDS
GTGGACGATGGTTTAGATCA+TGG 0.447699 2:-11376531 MsG0280007168.01.T01:CDS
GGAAAGTTGGATTGTGAGCT+AGG 0.448956 2:+11374307 None:intergenic
TAAGATGTATCATAGTAATC+AGG 0.451348 2:+11377212 None:intergenic
GTGTTCATAAAATAATCCTT+TGG 0.452100 2:+11374611 None:intergenic
ATGGGATCCCCGAACCCGTC+GGG 0.452675 2:-11378222 MsG0280007168.01.T01:CDS
AACTGACAATAACAATATCT+TGG 0.453891 2:+11377054 None:intergenic
AAGTTGTGAGGCCGAGTATC+GGG 0.458389 2:-11374442 MsG0280007168.01.T01:CDS
CCCATTGGAGGAGGGAAGAA+TGG 0.459028 2:-11376345 MsG0280007168.01.T01:CDS
CCATGTAAGAGATGACTATA+AGG 0.464137 2:-11376868 MsG0280007168.01.T01:CDS
TAAGTTGTAGTGGCTTCAAT+AGG 0.464199 2:+11376930 None:intergenic
TTATCTTGATGCAAAATTCG+AGG 0.464601 2:-11374994 MsG0280007168.01.T01:CDS
TTATAACGGTCCATCCTCAT+AGG 0.464836 2:+11376687 None:intergenic
GTGATTGTTCCTGTGGTAGA+TGG 0.471365 2:-11377173 MsG0280007168.01.T01:CDS
ACCTCATCCACGTTCCCGAC+GGG 0.473672 2:+11378208 None:intergenic
GCCAATCTGCGATATTTCCT+TGG 0.474370 2:-11374960 MsG0280007168.01.T01:CDS
TTGGATGCGTATGCAAATCA+TGG 0.475921 2:-11377301 MsG0280007168.01.T01:CDS
GTCACAGACCGTCTTGTTGT+AGG 0.476207 2:+11374537 None:intergenic
TCTTAAACTCCTTGGTAGAT+GGG 0.477916 2:+11376967 None:intergenic
AACACCTATGCCCGCATATG+TGG 0.478841 2:-11376550 MsG0280007168.01.T01:CDS
TCTTGGCCAAGATATTGAAA+TGG 0.479624 2:+11377071 None:intergenic
TAACCGAATCCAAGAATAAG+TGG 0.481997 2:+11376894 None:intergenic
GTCAGTTCTCGTAGTATCAA+TGG 0.482446 2:-11377038 MsG0280007168.01.T01:CDS
TTCTCATCTCCGTTGGGTAT+GGG 0.486914 2:-11378180 MsG0280007168.01.T01:CDS
TTAAATTTCTCATCTCCGTT+GGG 0.487429 2:-11378186 MsG0280007168.01.T01:CDS
TTTGACATCAATTTCTCGCC+AGG 0.488150 2:+11376713 None:intergenic
GAGAATAATGTATGAGGATG+TGG 0.491708 2:-11378136 MsG0280007168.01.T01:CDS
CGATAGATGTTCATGAAATG+AGG 0.501841 2:+11377260 None:intergenic
CCTTGTGTTAAGCATCCCAT+TGG 0.502514 2:-11376360 MsG0280007168.01.T01:CDS
AGGAATGATCTTAAACTCCT+TGG 0.505235 2:+11376959 None:intergenic
ATATAGATGGAATGTGTCAC+TGG 0.508992 2:-11376641 MsG0280007168.01.T01:CDS
TTGTCACAATATAATGATGT+TGG 0.511193 2:+11374345 None:intergenic
CATCTCCGTTGGGTATGGGT+AGG 0.511629 2:-11378176 MsG0280007168.01.T01:CDS
AACCACGAATGGCCAAATCA+TGG 0.511971 2:+11376811 None:intergenic
CAAGTTGTGAGGCCGAGTAT+CGG 0.512525 2:-11374443 MsG0280007168.01.T01:CDS
AAACCATCGTCCACATATGC+GGG 0.514138 2:+11376540 None:intergenic
TCACAGACCGTCTTGTTGTA+GGG 0.515636 2:+11374538 None:intergenic
ATAGTCTAAGGAGCAACTCC+TGG 0.520613 2:-11376731 MsG0280007168.01.T01:CDS
TGCACAACAAATGCAATGTC+AGG 0.520767 2:+11374723 None:intergenic
TATATCATATCAACCCATAT+GGG 0.521767 2:-11376760 MsG0280007168.01.T01:CDS
ACCAGTAAGAAAATATAAAG+AGG 0.521819 2:+11377133 None:intergenic
CCTTATAGTCATCTCTTACA+TGG 0.521908 2:+11376868 None:intergenic
AACCTCATCCACGTTCCCGA+CGG 0.522138 2:+11378207 None:intergenic
CCCCGAACCCGTCGGGAACG+TGG 0.523177 2:-11378215 MsG0280007168.01.T01:CDS
ACCCGTCGGGAACGTGGATG+AGG 0.524003 2:-11378209 MsG0280007168.01.T01:CDS
ACATTCCATCTATATAGAAT+CGG 0.524142 2:+11376649 None:intergenic
CCAGACAGACACGTCAAAGA+TGG 0.528503 2:-11377414 MsG0280007168.01.T01:intron
ATGAGGGTCTTGAAATAAGA+TGG 0.528537 2:+11377277 None:intergenic
CCACGTTCCCGACGGGTTCG+GGG 0.531898 2:+11378215 None:intergenic
TGTGTTAAGCATCCCATTGG+AGG 0.532031 2:-11376357 MsG0280007168.01.T01:CDS
TGCAACCAAAGCCCGATACT+CGG 0.533635 2:+11374431 None:intergenic
ATCTCCGTTGGGTATGGGTA+GGG 0.535438 2:-11378175 MsG0280007168.01.T01:CDS
ACCAAGGAAATATCGCAGAT+TGG 0.538102 2:+11374959 None:intergenic
CAATATAGGCAGCATTATAA+CGG 0.538223 2:+11376673 None:intergenic
TGATATGATATATATTTCCA+TGG 0.538829 2:+11376771 None:intergenic
TGGAATTGAAAGACGTGCCA+TGG 0.539646 2:-11376788 MsG0280007168.01.T01:CDS
TTTCAATTCCAAACCACGAA+TGG 0.541737 2:+11376800 None:intergenic
ACAACAAGACGGTCTGTGAC+AGG 0.544858 2:-11374534 MsG0280007168.01.T01:CDS
TGATGCAAAATTCGAGGTCA+AGG 0.546407 2:-11374988 MsG0280007168.01.T01:CDS
GTAAAATCTTTCTCAGCCAA+AGG 0.546911 2:-11374627 MsG0280007168.01.T01:CDS
TGATTATAAAGAAATCCAAC+AGG 0.548954 2:-11375024 MsG0280007168.01.T01:CDS
GTTAAGCATCCCATTGGAGG+AGG 0.549422 2:-11376354 MsG0280007168.01.T01:CDS
CTCACAACTTGATCTTGAAA+CGG 0.551017 2:+11374455 None:intergenic
CTGTAATGTACTACAACTCT+AGG 0.553211 2:+11374675 None:intergenic
TTGATGTCAAACTTCCTATG+AGG 0.553571 2:-11376701 MsG0280007168.01.T01:CDS
TATGAGTACGGAGATGGGGA+TGG 0.555525 2:-11378241 None:intergenic
TTGGGTGAAATTGGTGTGAG+AGG 0.557921 2:-11376417 MsG0280007168.01.T01:CDS
ATGAGTACGGAGATGGGGAT+GGG 0.558697 2:-11378240 None:intergenic
TCGTCCACATATGCGGGCAT+AGG 0.558965 2:+11376546 None:intergenic
ATCGAAGAGCTTGTTGTCGA+AGG 0.562436 2:-11376261 MsG0280007168.01.T01:CDS
TGGATTGGTGCCACAACGCT+TGG 0.563316 2:-11376511 MsG0280007168.01.T01:CDS
AGACTATATATCTCCCATAT+GGG 0.572225 2:+11376747 None:intergenic
GTATATGAGAATAATGTATG+AGG 0.582019 2:-11378142 MsG0280007168.01.T01:CDS
CGATGGTTTAGATCATGGAT+TGG 0.582178 2:-11376526 MsG0280007168.01.T01:CDS
TGTCAAACTTCCTATGAGGA+TGG 0.583979 2:-11376697 MsG0280007168.01.T01:CDS
GTAGTGGCTTCAATAGGACT+AGG 0.589256 2:+11376936 None:intergenic
AAGATCCGCAATCTATGCAC+CGG 0.591083 2:+11374197 None:intergenic
GATGGGATCCCCGAACCCGT+CGG 0.596981 2:-11378223 MsG0280007168.01.T01:CDS
TAAACCATCGTCCACATATG+CGG 0.598635 2:+11376539 None:intergenic
TGGATGCGTATGCAAATCAT+GGG 0.604145 2:-11377300 MsG0280007168.01.T01:CDS
GATAGATGTTCATGAAATGA+GGG 0.616440 2:+11377261 None:intergenic
AAAGTTTGCAAACACATACA+TGG 0.618569 2:-11377377 MsG0280007168.01.T01:CDS
AAATTGGTGTGAGAGGATCA+TGG 0.620109 2:-11376410 MsG0280007168.01.T01:CDS
ACAGTTCCGATAAGTTGTAG+TGG 0.630020 2:+11376920 None:intergenic
CATTAACATATGAAGTGCAG+TGG 0.632622 2:-11374410 MsG0280007168.01.T01:CDS
TAGAGTTGTAGTACATTACA+GGG 0.634074 2:-11374673 MsG0280007168.01.T01:CDS
GAACAATCACAGTATGTCGT+AGG 0.634142 2:+11377186 None:intergenic
TGGTGAGAGATTGGAGAACA+AGG 0.634458 2:-11377114 MsG0280007168.01.T01:CDS
TTAAGCATCCCATTGGAGGA+GGG 0.635269 2:-11376353 MsG0280007168.01.T01:CDS
TCGTCGTCACCATCTACCAC+AGG 0.635865 2:+11377164 None:intergenic
CCAATGGGATGCTTAACACA+AGG 0.636305 2:+11376360 None:intergenic
ATCGCGCAACTTCAAGACCA+AGG 0.646397 2:+11374943 None:intergenic
GTGGCTTCAATAGGACTAGG+AGG 0.652100 2:+11376939 None:intergenic
GAGCTAGGTAAACTGCAGAT+CGG 0.661952 2:+11374322 None:intergenic
AATAACATCACCAAGCGTTG+TGG 0.664989 2:+11376501 None:intergenic
CGTTTCAAGATCAAGTTGTG+AGG 0.665889 2:-11374454 MsG0280007168.01.T01:CDS
ACATACTGTGATTGTTCCTG+TGG 0.666463 2:-11377180 MsG0280007168.01.T01:CDS
ATCATTTGACGTGAGCAATG+AGG 0.677189 2:-11376583 MsG0280007168.01.T01:CDS
ATAATGTATGAGGATGTGGA+AGG 0.691647 2:-11378132 MsG0280007168.01.T01:intron
CTACTTGCCCTACAACAAGA+CGG 0.698685 2:-11374545 MsG0280007168.01.T01:CDS
ATGCCCGCATATGTGGACGA+TGG 0.724789 2:-11376543 MsG0280007168.01.T01:CDS
GTTACCCTACCCATACCCAA+CGG 0.728090 2:+11378171 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTAAATTTATAATAAA+AGG - Chr2:11374455-11374474 MsG0280007168.01.T01:CDS 0.0%
!! ATATTAAATTTATAATAAAA+GGG - Chr2:11374456-11374475 MsG0280007168.01.T01:CDS 0.0%
!! TTATAAAATATAAAGTCAAA+CGG - Chr2:11374979-11374998 MsG0280007168.01.T01:CDS 10.0%
!!! ATCAATTGTTTTTTTTTTTT+AGG - Chr2:11376394-11376413 MsG0280007168.01.T01:CDS 10.0%
!! AAAAAAAAATACCATTCTTA+CGG + Chr2:11376518-11376537 None:intergenic 15.0%
!! TATATTCAAAGAAAATTTCA+AGG + Chr2:11376655-11376674 None:intergenic 15.0%
!!! ATATTTTTCATAAAAGACAA+AGG - Chr2:11376119-11376138 MsG0280007168.01.T01:intron 15.0%
!!! GTAGAAATAAGTAAATTTTT+CGG - Chr2:11376565-11376584 MsG0280007168.01.T01:CDS 15.0%
!!! TATTATTTTGTATGCATTAT+AGG - Chr2:11376299-11376318 MsG0280007168.01.T01:CDS 15.0%
!!! TCAAACAAATTTTATTGATT+AGG - Chr2:11376775-11376794 MsG0280007168.01.T01:CDS 15.0%
!! AGAAATGGATAAAAATTGAT+TGG - Chr2:11376628-11376647 MsG0280007168.01.T01:CDS 20.0%
!! AGTTTAAGAGATAAATCATA+TGG + Chr2:11377609-11377628 None:intergenic 20.0%
!! CAAAACATCCAAAAAAAATT+TGG - Chr2:11376939-11376958 MsG0280007168.01.T01:CDS 20.0%
!! GATAAATTAATCTCCTTATA+AGG + Chr2:11377680-11377699 None:intergenic 20.0%
!! TAGTTATTCATTCCAATAAT+TGG + Chr2:11376248-11376267 None:intergenic 20.0%
!! TATTTATTCAATGCATTCAA+AGG + Chr2:11374486-11374505 None:intergenic 20.0%
!! TGATATGATATATATTTCCA+TGG + Chr2:11375669-11375688 None:intergenic 20.0%
!!! ATAGTGCTTTATTACTTAAA+TGG + Chr2:11376894-11376913 None:intergenic 20.0%
!!! TATTCAAGAACATATTTTCT+CGG + Chr2:11377543-11377562 None:intergenic 20.0%
!!! TCTTCATCAATTTTCATTAA+AGG - Chr2:11376445-11376464 MsG0280007168.01.T01:CDS 20.0%
!!! TCTTGGTTTTAAAAAATTGT+TGG + Chr2:11376989-11377008 None:intergenic 20.0%
!!! TTTTGAGATAAAAAGATCTT+AGG + Chr2:11376924-11376943 None:intergenic 20.0%
! AAAAAATTGTTGGATGAAGT+GGG + Chr2:11376979-11376998 None:intergenic 25.0%
! AACTGACAATAACAATATCT+TGG + Chr2:11375386-11375405 None:intergenic 25.0%
! AATATGATTTCGATTTCTCT+TGG + Chr2:11377006-11377025 None:intergenic 25.0%
! ACATTCCATCTATATAGAAT+CGG + Chr2:11375791-11375810 None:intergenic 25.0%
! ACCAGTAAGAAAATATAAAG+AGG + Chr2:11375307-11375326 None:intergenic 25.0%
! ATATATCATATCAACCCATA+TGG - Chr2:11375676-11375695 MsG0280007168.01.T01:intron 25.0%
! ATGATCAAATAGAGAAGAAA+TGG - Chr2:11376613-11376632 MsG0280007168.01.T01:CDS 25.0%
! CATGTTACTGTTTATTCTAT+TGG + Chr2:11377072-11377091 None:intergenic 25.0%
! GAAAACTTTCTTCCAATTAT+TGG - Chr2:11376233-11376252 MsG0280007168.01.T01:intron 25.0%
! GAATATATTAAACTCCAGAA+GGG - Chr2:11376668-11376687 MsG0280007168.01.T01:CDS 25.0%
! GTATATGAGAATAATGTATG+AGG - Chr2:11374295-11374314 MsG0280007168.01.T01:CDS 25.0%
! GTGTTCATAAAATAATCCTT+TGG + Chr2:11377829-11377848 None:intergenic 25.0%
! GTTCGAAAAGATAAAATAGA+AGG + Chr2:11376754-11376773 None:intergenic 25.0%
! TAAAAAATTGTTGGATGAAG+TGG + Chr2:11376980-11376999 None:intergenic 25.0%
! TAAAAATAGAACAGACCAAA+AGG + Chr2:11376371-11376390 None:intergenic 25.0%
! TAAGATGTATCATAGTAATC+AGG + Chr2:11375228-11375247 None:intergenic 25.0%
! TATATAGAATCGGTCAATAT+AGG + Chr2:11375781-11375800 None:intergenic 25.0%
! TATATCATATCAACCCATAT+GGG - Chr2:11375677-11375696 MsG0280007168.01.T01:intron 25.0%
! TCTGAGTGAAGTAATAAAAT+TGG + Chr2:11377304-11377323 None:intergenic 25.0%
! TGAATATATTAAACTCCAGA+AGG - Chr2:11376667-11376686 MsG0280007168.01.T01:CDS 25.0%
! TGATTATAAAGAAATCCAAC+AGG - Chr2:11377413-11377432 MsG0280007168.01.T01:intron 25.0%
! TTGTCACAATATAATGATGT+TGG + Chr2:11378095-11378114 None:intergenic 25.0%
!! AATCGCTTCAAAGATTTTAT+TGG + Chr2:11375117-11375136 None:intergenic 25.0%
!! ACTTTTCACATATCAGTTTT+GGG - Chr2:11376002-11376021 MsG0280007168.01.T01:intron 25.0%
!! AGATTTTATTGGCAATTTTG+AGG + Chr2:11375106-11375125 None:intergenic 25.0%
!! ATAGTAATCAGGATGATTTT+TGG + Chr2:11375217-11375236 None:intergenic 25.0%
!! ATAGTCATTGATTGATTGAT+TGG + Chr2:11374870-11374889 None:intergenic 25.0%
!! TACTTTTCACATATCAGTTT+TGG - Chr2:11376001-11376020 MsG0280007168.01.T01:intron 25.0%
!! TCCTCTTTATATTTTCTTAC+TGG - Chr2:11375303-11375322 MsG0280007168.01.T01:intron 25.0%
!! TGATTTAGAAGAAACTTGTT+TGG - Chr2:11375830-11375849 MsG0280007168.01.T01:intron 25.0%
!! TTCTTTATCAATTGTCCTTT+TGG - Chr2:11376353-11376372 MsG0280007168.01.T01:CDS 25.0%
!!! AAACGGTACTAAGATTTTTT+CGG - Chr2:11374996-11375015 MsG0280007168.01.T01:CDS 25.0%
!!! AAACTTTTTCCTATTTCTTC+CGG - Chr2:11378221-11378240 MsG0280007168.01.T01:CDS 25.0%
!!! ACAGGATATACTATTTTTCT+AGG - Chr2:11377921-11377940 MsG0280007168.01.T01:intron 25.0%
!!! AGGTTTTAAGAATGAAACTA+AGG + Chr2:11377031-11377050 None:intergenic 25.0%
!!! ATAAAATCTTTGAAGCGATT+TGG - Chr2:11375117-11375136 MsG0280007168.01.T01:intron 25.0%
!!! CAATTTTAACATGAGTCAAA+TGG - Chr2:11376199-11376218 MsG0280007168.01.T01:intron 25.0%
!!! TATTTTTCTAGGATCATCTT+TGG - Chr2:11377932-11377951 MsG0280007168.01.T01:intron 25.0%
!!! TTTGCAAACTTTTTCATTCA+TGG + Chr2:11375052-11375071 None:intergenic 25.0%
AAAGTTTGCAAACACATACA+TGG - Chr2:11375060-11375079 MsG0280007168.01.T01:CDS 30.0%
AACTGTTATCCACTTATTCT+TGG - Chr2:11375534-11375553 MsG0280007168.01.T01:intron 30.0%
AGAACTTGTATGCTTTGATT+TGG - Chr2:11376142-11376161 MsG0280007168.01.T01:intron 30.0%
AGACTATATATCTCCCATAT+GGG + Chr2:11375693-11375712 None:intergenic 30.0%
ATTTGAATCAGCAATAGTTG+AGG + Chr2:11374822-11374841 None:intergenic 30.0%
CAATATAGGCAGCATTATAA+CGG + Chr2:11375767-11375786 None:intergenic 30.0%
CTTGAATAATTGCATGATAC+TGG - Chr2:11377555-11377574 MsG0280007168.01.T01:intron 30.0%
CTTTATTACTTAAATGGAGG+TGG + Chr2:11376888-11376907 None:intergenic 30.0%
GATAGATGTTCATGAAATGA+GGG + Chr2:11375179-11375198 None:intergenic 30.0%
TAGACTATATATCTCCCATA+TGG + Chr2:11375694-11375713 None:intergenic 30.0%
TAGAGTTGTAGTACATTACA+GGG - Chr2:11377764-11377783 MsG0280007168.01.T01:intron 30.0%
TATCCACTTATTCTTGGATT+CGG - Chr2:11375540-11375559 MsG0280007168.01.T01:intron 30.0%
TATGGGAGATATATAGTCTA+AGG - Chr2:11375694-11375713 MsG0280007168.01.T01:intron 30.0%
TATTTGATCATGCTTAAGCA+AGG + Chr2:11376604-11376623 None:intergenic 30.0%
TCACTTCCATTTCAATATCT+TGG - Chr2:11375360-11375379 MsG0280007168.01.T01:intron 30.0%
TCCAAGATATTACTCAGTAT+AGG - Chr2:11377652-11377671 MsG0280007168.01.T01:intron 30.0%
TCCTATACTGAGTAATATCT+TGG + Chr2:11377656-11377675 None:intergenic 30.0%
TGAACTAAGTTTCCATGATT+TGG - Chr2:11375614-11375633 MsG0280007168.01.T01:intron 30.0%
TGCAGCCAAAAATTAGATTT+GGG + Chr2:11377357-11377376 None:intergenic 30.0%
TTAAATTTCTCATCTCCGTT+GGG - Chr2:11374251-11374270 MsG0280007168.01.T01:CDS 30.0%
TTATCTTGATGCAAAATTCG+AGG - Chr2:11377443-11377462 MsG0280007168.01.T01:intron 30.0%
TTGCAGCCAAAAATTAGATT+TGG + Chr2:11377358-11377377 None:intergenic 30.0%
TTGTATTTCAACCGTAAGAA+TGG - Chr2:11376504-11376523 MsG0280007168.01.T01:CDS 30.0%
! AAAACTGATTTATCTCTCTC+TGG - Chr2:11377849-11377868 MsG0280007168.01.T01:intron 30.0%
! AAGAAGCAAGTTGAAATGAT+AGG + Chr2:11374758-11374777 None:intergenic 30.0%
! ATGCTGAGTTGAATATTACA+TGG + Chr2:11376831-11376850 None:intergenic 30.0%
! ATTCTTTGTGTTTCTGATAG+AGG - Chr2:11375423-11375442 MsG0280007168.01.T01:intron 30.0%
! ATTGACCGATTCTATATAGA+TGG - Chr2:11375783-11375802 MsG0280007168.01.T01:intron 30.0%
! CAAGATAAGATTTTACCTGT+TGG + Chr2:11377431-11377450 None:intergenic 30.0%
! CCAAAAATTAGATTTGGGTT+TGG + Chr2:11377352-11377371 None:intergenic 30.0%
! CCAAACCCAAATCTAATTTT+TGG - Chr2:11377349-11377368 MsG0280007168.01.T01:CDS 30.0%
! GAACTTGTATGCTTTGATTT+GGG - Chr2:11376143-11376162 MsG0280007168.01.T01:intron 30.0%
! GTGCTTTATTACTTAAATGG+AGG + Chr2:11376891-11376910 None:intergenic 30.0%
! TACCAAGTATGAATTGCTTT+TGG - Chr2:11374547-11374566 MsG0280007168.01.T01:CDS 30.0%
! TTCTAAGCTCTATTTTCTCA+CGG + Chr2:11378196-11378215 None:intergenic 30.0%
!! CACTTTATTAGCTTTCGTTA+TGG + Chr2:11377158-11377177 None:intergenic 30.0%
!! GGAATCAATTTTGATGTGTT+TGG + Chr2:11378165-11378184 None:intergenic 30.0%
!! TTGGAACATGAATTTTGACA+TGG + Chr2:11377285-11377304 None:intergenic 30.0%
!!! ATATCAGTTTTGGGTGAAAT+TGG - Chr2:11376011-11376030 MsG0280007168.01.T01:intron 30.0%
!!! GGTGTTTTGTTTAAGAAAGA+AGG + Chr2:11377051-11377070 None:intergenic 30.0%
!!! TATTTTCTCACGGATTAGAT+TGG + Chr2:11378186-11378205 None:intergenic 30.0%
!!! TGCGTCTTCCAAATTTTTTT+TGG + Chr2:11376950-11376969 None:intergenic 30.0%
AACAAGCTCTTCGATCATTA+GGG + Chr2:11376171-11376190 None:intergenic 35.0%
AGATGAGCAGCAAGATAAAA+AGG - Chr2:11374616-11374635 MsG0280007168.01.T01:CDS 35.0%
AGGAATGATCTTAAACTCCT+TGG + Chr2:11375481-11375500 None:intergenic 35.0%
ATAATGTATGAGGATGTGGA+AGG - Chr2:11374305-11374324 MsG0280007168.01.T01:CDS 35.0%
ATATAGATGGAATGTGTCAC+TGG - Chr2:11375796-11375815 MsG0280007168.01.T01:intron 35.0%
ATCTTAAACTCCTTGGTAGA+TGG + Chr2:11375474-11375493 None:intergenic 35.0%
ATGAGCAGCAAGATAAAAAG+GGG - Chr2:11374618-11374637 MsG0280007168.01.T01:CDS 35.0%
ATGAGGGTCTTGAAATAAGA+TGG + Chr2:11375163-11375182 None:intergenic 35.0%
CATTAACATATGAAGTGCAG+TGG - Chr2:11378027-11378046 MsG0280007168.01.T01:intron 35.0%
CCATGTAAGAGATGACTATA+AGG - Chr2:11375569-11375588 MsG0280007168.01.T01:intron 35.0%
CCTTATAGTCATCTCTTACA+TGG + Chr2:11375572-11375591 None:intergenic 35.0%
CGATAGATGTTCATGAAATG+AGG + Chr2:11375180-11375199 None:intergenic 35.0%
CTAGAGTTGTAGTACATTAC+AGG - Chr2:11377763-11377782 MsG0280007168.01.T01:intron 35.0%
CTCACAACTTGATCTTGAAA+CGG + Chr2:11377985-11378004 None:intergenic 35.0%
CTGTAATGTACTACAACTCT+AGG + Chr2:11377765-11377784 None:intergenic 35.0%
GACCAAAAGCAATTCATACT+TGG + Chr2:11374552-11374571 None:intergenic 35.0%
GAGAATAATGTATGAGGATG+TGG - Chr2:11374301-11374320 MsG0280007168.01.T01:CDS 35.0%
GATGAGCAGCAAGATAAAAA+GGG - Chr2:11374617-11374636 MsG0280007168.01.T01:CDS 35.0%
GTAAAATCTTTCTCAGCCAA+AGG - Chr2:11377810-11377829 MsG0280007168.01.T01:intron 35.0%
GTTAAATTTCTCATCTCCGT+TGG - Chr2:11374250-11374269 MsG0280007168.01.T01:CDS 35.0%
GTTCAACAAGCTTGAAAACA+CGG - Chr2:11377229-11377248 MsG0280007168.01.T01:CDS 35.0%
TAACCGAATCCAAGAATAAG+TGG + Chr2:11375546-11375565 None:intergenic 35.0%
TAAGTTGTAGTGGCTTCAAT+AGG + Chr2:11375510-11375529 None:intergenic 35.0%
TATATTAAACTCCAGAAGGG+TGG - Chr2:11376671-11376690 MsG0280007168.01.T01:CDS 35.0%
TATTACTTAAATGGAGGTGG+CGG + Chr2:11376885-11376904 None:intergenic 35.0%
TCTTAAACTCCTTGGTAGAT+GGG + Chr2:11375473-11375492 None:intergenic 35.0%
TCTTGGCCAAGATATTGAAA+TGG + Chr2:11375369-11375388 None:intergenic 35.0%
TGATGTGTTTGGTACATTCA+TGG + Chr2:11378154-11378173 None:intergenic 35.0%
TTGAAGCCACTACAACTTAT+CGG - Chr2:11375511-11375530 MsG0280007168.01.T01:intron 35.0%
TTGATGTCAAACTTCCTATG+AGG - Chr2:11375736-11375755 MsG0280007168.01.T01:intron 35.0%
TTGGTACATTCATGGAAAGT+TGG + Chr2:11378146-11378165 None:intergenic 35.0%
TTTCAATTCCAAACCACGAA+TGG + Chr2:11375640-11375659 None:intergenic 35.0%
! AGCTAATAAAGTGCACTGAT+TGG - Chr2:11377165-11377184 MsG0280007168.01.T01:CDS 35.0%
! CTGAGTTGAATATTACATGG+TGG + Chr2:11376828-11376847 None:intergenic 35.0%
! TAGGCAATCACTCTTTCTTT+TGG - Chr2:11376413-11376432 MsG0280007168.01.T01:CDS 35.0%
! TTTTCTTACTGGTGAGAGAT+TGG - Chr2:11375314-11375333 MsG0280007168.01.T01:intron 35.0%
!! CGCTTGGTGATGTTATTTAA+TGG - Chr2:11375942-11375961 MsG0280007168.01.T01:intron 35.0%
!! CTTGGAAATTTGAAGCATTG+TGG - Chr2:11374680-11374699 MsG0280007168.01.T01:CDS 35.0%
!! TGGTTTTGCAGATTCAGATT+GGG - Chr2:11377869-11377888 MsG0280007168.01.T01:intron 35.0%
AAATTGGTGTGAGAGGATCA+TGG - Chr2:11376027-11376046 MsG0280007168.01.T01:intron 40.0%
ACAGTTCCGATAAGTTGTAG+TGG + Chr2:11375520-11375539 None:intergenic 40.0%
ACATACTGTGATTGTTCCTG+TGG - Chr2:11375257-11375276 MsG0280007168.01.T01:intron 40.0%
ACCAAGGAAATATCGCAGAT+TGG + Chr2:11377481-11377500 None:intergenic 40.0%
AGATCACGTGACATTGAAAC+AGG - Chr2:11377207-11377226 MsG0280007168.01.T01:CDS 40.0%
ATCATTTGACGTGAGCAATG+AGG - Chr2:11375854-11375873 MsG0280007168.01.T01:intron 40.0%
CAACAAGCTCTTCGATCATT+AGG + Chr2:11376172-11376191 None:intergenic 40.0%
CGATGGTTTAGATCATGGAT+TGG - Chr2:11375911-11375930 MsG0280007168.01.T01:intron 40.0%
GAACAATCACAGTATGTCGT+AGG + Chr2:11375254-11375273 None:intergenic 40.0%
GTAGAGATGAATACCAGATG+AGG + Chr2:11374732-11374751 None:intergenic 40.0%
GTCAGTTCTCGTAGTATCAA+TGG - Chr2:11375399-11375418 MsG0280007168.01.T01:intron 40.0%
GTGCTCTTAAATGCAGTCAA+TGG + Chr2:11374580-11374599 None:intergenic 40.0%
TAAACCATCGTCCACATATG+CGG + Chr2:11375901-11375920 None:intergenic 40.0%
TAGGATCATCTTTGGTCTCA+TGG - Chr2:11377940-11377959 MsG0280007168.01.T01:intron 40.0%
TCGATTCAGAATTCCTCATC+TGG - Chr2:11374716-11374735 MsG0280007168.01.T01:CDS 40.0%
TGAGCAGCAAGATAAAAAGG+GGG - Chr2:11374619-11374638 MsG0280007168.01.T01:CDS 40.0%
TGATGCAAAATTCGAGGTCA+AGG - Chr2:11377449-11377468 MsG0280007168.01.T01:intron 40.0%
TGCACAACAAATGCAATGTC+AGG + Chr2:11377717-11377736 None:intergenic 40.0%
TGGAGTAGAGACAAGTTTAG+TGG + Chr2:11377589-11377608 None:intergenic 40.0%
TGGATGCGTATGCAAATCAT+GGG - Chr2:11375137-11375156 MsG0280007168.01.T01:intron 40.0%
TGTAAGACACGAGGATGTTA+TGG - Chr2:11376697-11376716 MsG0280007168.01.T01:CDS 40.0%
TGTCAAACTTCCTATGAGGA+TGG - Chr2:11375740-11375759 MsG0280007168.01.T01:intron 40.0%
TGTGCGACATCATGATTAAC+TGG + Chr2:11377327-11377346 None:intergenic 40.0%
TTATAACGGTCCATCCTCAT+AGG + Chr2:11375753-11375772 None:intergenic 40.0%
TTGGATGCGTATGCAAATCA+TGG - Chr2:11375136-11375155 MsG0280007168.01.T01:intron 40.0%
TTTGACATCAATTTCTCGCC+AGG + Chr2:11375727-11375746 None:intergenic 40.0%
! AATAACATCACCAAGCGTTG+TGG + Chr2:11375939-11375958 None:intergenic 40.0%
! CGTTTCAAGATCAAGTTGTG+AGG - Chr2:11377983-11378002 MsG0280007168.01.T01:intron 40.0%
! CTCAGTATAGGAGCCTTATA+AGG - Chr2:11377664-11377683 MsG0280007168.01.T01:intron 40.0%
! GACTGCATTTAAGAGCACAA+AGG - Chr2:11374582-11374601 MsG0280007168.01.T01:CDS 40.0%
!! GCGAAAGCAAGTTTGCTTTT+TGG - Chr2:11375445-11375464 MsG0280007168.01.T01:intron 40.0%
!! GGAAATTTGAAGCATTGTGG+AGG - Chr2:11374683-11374702 MsG0280007168.01.T01:CDS 40.0%
!!! CTGGTTTTGCAGATTCAGAT+TGG - Chr2:11377868-11377887 MsG0280007168.01.T01:intron 40.0%
!!! TTTTTGGAACCCATCTACCA+AGG - Chr2:11375461-11375480 MsG0280007168.01.T01:intron 40.0%
AAACCATCGTCCACATATGC+GGG + Chr2:11375900-11375919 None:intergenic 45.0%
AACCACGAATGGCCAAATCA+TGG + Chr2:11375629-11375648 None:intergenic 45.0%
ACGAGGATGTTATGGAGAGT+TGG - Chr2:11376705-11376724 MsG0280007168.01.T01:CDS 45.0%
ATAGTCTAAGGAGCAACTCC+TGG - Chr2:11375706-11375725 MsG0280007168.01.T01:intron 45.0%
CCAATGGGATGCTTAACACA+AGG + Chr2:11376080-11376099 None:intergenic 45.0%
CCTTGTGTTAAGCATCCCAT+TGG - Chr2:11376077-11376096 MsG0280007168.01.T01:intron 45.0%
CTACTTGCCCTACAACAAGA+CGG - Chr2:11377892-11377911 MsG0280007168.01.T01:intron 45.0%
GAGCTAGGTAAACTGCAGAT+CGG + Chr2:11378118-11378137 None:intergenic 45.0%
GCCAATCTGCGATATTTCCT+TGG - Chr2:11377477-11377496 MsG0280007168.01.T01:intron 45.0%
GGAAAGTTGGATTGTGAGCT+AGG + Chr2:11378133-11378152 None:intergenic 45.0%
GTAGTGGCTTCAATAGGACT+AGG + Chr2:11375504-11375523 None:intergenic 45.0%
GTCTTACAAAACCACCCTTC+TGG + Chr2:11376685-11376704 None:intergenic 45.0%
GTGATTGTTCCTGTGGTAGA+TGG - Chr2:11375264-11375283 MsG0280007168.01.T01:intron 45.0%
GTGGACGATGGTTTAGATCA+TGG - Chr2:11375906-11375925 MsG0280007168.01.T01:intron 45.0%
TAGGCGACGATAAGTACAAG+TGG - Chr2:11376794-11376813 MsG0280007168.01.T01:CDS 45.0%
TGGAATTGAAAGACGTGCCA+TGG - Chr2:11375649-11375668 MsG0280007168.01.T01:intron 45.0%
TGGTGAGAGATTGGAGAACA+AGG - Chr2:11375323-11375342 MsG0280007168.01.T01:intron 45.0%
TGTGTTAAGCATCCCATTGG+AGG - Chr2:11376080-11376099 MsG0280007168.01.T01:intron 45.0%
TTAAGCATCCCATTGGAGGA+GGG - Chr2:11376084-11376103 MsG0280007168.01.T01:intron 45.0%
TTCTCATCTCCGTTGGGTAT+GGG - Chr2:11374257-11374276 MsG0280007168.01.T01:CDS 45.0%
TTGGGTGAAATTGGTGTGAG+AGG - Chr2:11376020-11376039 MsG0280007168.01.T01:intron 45.0%
TTGTTGGATGAAGTGGGAGA+AGG + Chr2:11376973-11376992 None:intergenic 45.0%
TTTCTCATCTCCGTTGGGTA+TGG - Chr2:11374256-11374275 MsG0280007168.01.T01:CDS 45.0%
! TCACAGACCGTCTTGTTGTA+GGG + Chr2:11377902-11377921 None:intergenic 45.0%
! TGATTTGGCCATTCGTGGTT+TGG - Chr2:11375629-11375648 MsG0280007168.01.T01:intron 45.0%
! TTCCATGATTTGGCCATTCG+TGG - Chr2:11375624-11375643 MsG0280007168.01.T01:intron 45.0%
!! ATCGAAGAGCTTGTTGTCGA+AGG - Chr2:11376176-11376195 MsG0280007168.01.T01:intron 45.0%
!! AATTCATTTATTTAAATAAA+TGG - Chr2:11374408-11374427 MsG0280007168.01.T01:CDS 5.0%
AACACCTATGCCCGCATATG+TGG - Chr2:11375887-11375906 MsG0280007168.01.T01:intron 50.0%
AAGTTGTGAGGCCGAGTATC+GGG - Chr2:11377995-11378014 MsG0280007168.01.T01:intron 50.0%
ACAACAAGACGGTCTGTGAC+AGG - Chr2:11377903-11377922 MsG0280007168.01.T01:intron 50.0%
ATCGCGCAACTTCAAGACCA+AGG + Chr2:11377497-11377516 None:intergenic 50.0%
ATCTCCGTTGGGTATGGGTA+GGG - Chr2:11374262-11374281 MsG0280007168.01.T01:CDS 50.0%
CAAGTTGTGAGGCCGAGTAT+CGG - Chr2:11377994-11378013 MsG0280007168.01.T01:intron 50.0%
CAGCAAGATAAAAAGGGGGC+AGG - Chr2:11374623-11374642 MsG0280007168.01.T01:CDS 50.0%
CCAGACAGACACGTCAAAGA+TGG - Chr2:11375023-11375042 MsG0280007168.01.T01:CDS 50.0%
CCATCTTTGACGTGTCTGTC+TGG + Chr2:11375026-11375045 None:intergenic 50.0%
CCATTCTTCCCTCCTCCAAT+GGG + Chr2:11376095-11376114 None:intergenic 50.0%
GATCGATCTACGCTCTCTCT+TGG - Chr2:11374662-11374681 MsG0280007168.01.T01:CDS 50.0%
GTGGCTTCAATAGGACTAGG+AGG + Chr2:11375501-11375520 None:intergenic 50.0%
GTTAAGCATCCCATTGGAGG+AGG - Chr2:11376083-11376102 MsG0280007168.01.T01:intron 50.0%
GTTACCCTACCCATACCCAA+CGG + Chr2:11374269-11374288 None:intergenic 50.0%
TGCAACCAAAGCCCGATACT+CGG + Chr2:11378009-11378028 None:intergenic 50.0%
TGGAGTTTGGGTCAAGAGGA+TGG - Chr2:11374368-11374387 MsG0280007168.01.T01:CDS 50.0%
! AGAGAGAGCGTAGATCGATC+TGG + Chr2:11374662-11374681 None:intergenic 50.0%
! GTCACAGACCGTCTTGTTGT+AGG + Chr2:11377903-11377922 None:intergenic 50.0%
!!! GGGTGGTTTTGTAAGACACG+AGG - Chr2:11376688-11376707 MsG0280007168.01.T01:CDS 50.0%
AACCTCATCCACGTTCCCGA+CGG + Chr2:11374233-11374252 None:intergenic 55.0%
ACGGTGGAGTTTGGGTCAAG+AGG - Chr2:11374364-11374383 MsG0280007168.01.T01:CDS 55.0%
ATGCCCGCATATGTGGACGA+TGG - Chr2:11375894-11375913 MsG0280007168.01.T01:intron 55.0%
CATCTCCGTTGGGTATGGGT+AGG - Chr2:11374261-11374280 MsG0280007168.01.T01:CDS 55.0%
CCATGCCTACGGTGGAGTTT+GGG - Chr2:11374356-11374375 MsG0280007168.01.T01:CDS 55.0%
CCCATTGGAGGAGGGAAGAA+TGG - Chr2:11376092-11376111 MsG0280007168.01.T01:intron 55.0%
CTTGACCCAAACTCCACCGT+AGG + Chr2:11374364-11374383 None:intergenic 55.0%
GCCATTCTTCCCTCCTCCAA+TGG + Chr2:11376096-11376115 None:intergenic 55.0%
TCCACCGTAGGCATGGCAAT+GGG + Chr2:11374352-11374371 None:intergenic 55.0%
TCGTCCACATATGCGGGCAT+AGG + Chr2:11375894-11375913 None:intergenic 55.0%
TCGTCGTCACCATCTACCAC+AGG + Chr2:11375276-11375295 None:intergenic 55.0%
! ATGGAGGTGGCGGTTGTTGT+CGG + Chr2:11376875-11376894 None:intergenic 55.0%
!! TGGATTGGTGCCACAACGCT+TGG - Chr2:11375926-11375945 MsG0280007168.01.T01:intron 55.0%
ACCTCATCCACGTTCCCGAC+GGG + Chr2:11374232-11374251 None:intergenic 60.0%
CCACCGTAGGCATGGCAATG+GGG + Chr2:11374351-11374370 None:intergenic 60.0%
CCCAAACTCCACCGTAGGCA+TGG + Chr2:11374359-11374378 None:intergenic 60.0%
CTCCACCGTAGGCATGGCAA+TGG + Chr2:11374353-11374372 None:intergenic 60.0%
GCCATGCCTACGGTGGAGTT+TGG - Chr2:11374355-11374374 MsG0280007168.01.T01:CDS 60.0%
! AGGTGGCGGTTGTTGTCGGA+AGG + Chr2:11376871-11376890 None:intergenic 60.0%
! ATCCACGTTCCCGACGGGTT+CGG + Chr2:11374227-11374246 None:intergenic 60.0%
! GGTGGCGGTTGTTGTCGGAA+GGG + Chr2:11376870-11376889 None:intergenic 60.0%
!! TGAGGCCGAGTATCGGGCTT+TGG - Chr2:11378001-11378020 MsG0280007168.01.T01:intron 60.0%
ACCCGTCGGGAACGTGGATG+AGG - Chr2:11374228-11374247 MsG0280007168.01.T01:CDS 65.0%
ATGGGATCCCCGAACCCGTC+GGG - Chr2:11374215-11374234 MsG0280007168.01.T01:CDS 65.0%
CCCCATTGCCATGCCTACGG+TGG - Chr2:11374348-11374367 MsG0280007168.01.T01:CDS 65.0%
CCGCCCCATTGCCATGCCTA+CGG - Chr2:11374345-11374364 MsG0280007168.01.T01:CDS 65.0%
CCGTAGGCATGGCAATGGGG+CGG + Chr2:11374348-11374367 None:intergenic 65.0%
CGTAGGCATGGCAATGGGGC+GGG + Chr2:11374347-11374366 None:intergenic 65.0%
GATGGGATCCCCGAACCCGT+CGG - Chr2:11374214-11374233 MsG0280007168.01.T01:CDS 65.0%
GTAGGCATGGCAATGGGGCG+GGG + Chr2:11374346-11374365 None:intergenic 65.0%
! TCCACGTTCCCGACGGGTTC+GGG + Chr2:11374226-11374245 None:intergenic 65.0%
GCAATGGGGCGGGGTGGGAA+CGG + Chr2:11374337-11374356 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG + Chr2:11374342-11374361 None:intergenic 70.0%
! CCACGTTCCCGACGGGTTCG+GGG + Chr2:11374225-11374244 None:intergenic 70.0%
CCCCGAACCCGTCGGGAACG+TGG - Chr2:11374222-11374241 MsG0280007168.01.T01:CDS 75.0%
GGCATGGCAATGGGGCGGGG+TGG + Chr2:11374343-11374362 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 11374209 11378250 11374209 ID=MsG0280007168.01;Name=MsG0280007168.01
Chr2 mRNA 11374209 11378250 11374209 ID=MsG0280007168.01.T01;Parent=MsG0280007168.01;Name=MsG0280007168.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.75|1|1|4|0|694
Chr2 exon 11378133 11378250 11378133 ID=MsG0280007168.01.T01:exon:3528;Parent=MsG0280007168.01.T01
Chr2 exon 11376247 11377428 11376247 ID=MsG0280007168.01.T01:exon:3527;Parent=MsG0280007168.01.T01
Chr2 exon 11374929 11375131 11374929 ID=MsG0280007168.01.T01:exon:3526;Parent=MsG0280007168.01.T01
Chr2 exon 11374209 11374790 11374209 ID=MsG0280007168.01.T01:exon:3525;Parent=MsG0280007168.01.T01
Chr2 CDS 11378133 11378250 11378133 ID=MsG0280007168.01.T01:cds;Parent=MsG0280007168.01.T01
Chr2 CDS 11376247 11377428 11376247 ID=MsG0280007168.01.T01:cds;Parent=MsG0280007168.01.T01
Chr2 CDS 11374929 11375131 11374929 ID=MsG0280007168.01.T01:cds;Parent=MsG0280007168.01.T01
Chr2 CDS 11374209 11374790 11374209 ID=MsG0280007168.01.T01:cds;Parent=MsG0280007168.01.T01
Gene Sequence

>MsG0280007168.01.T01

ATGGGGATGGGATCCCCGAACCCGTCGGGAACGTGGATGAGGTTAAATTTCTCATCTCCGTTGGGTATGGGTAGGGTAACGAGTAAGTATATGAGAATAATGTATGAGGATGTGGAAGACACGTCAAAGATGGATTCCATGAATGAAAAAGTTTGCAAACACATACATGGCGATCTTGCATTATCTATTACCTCAAAATTGCCAATAAAATCTTTGAAGCGATTTGGATGCGTATGCAAATCATGGGCCATCTTATTTCAAGACCCTCATTTCATGAACATCTATCGCAACAATTTCATATCCAAAAATCATCCTGATTACTATGATACATCTTACATCCTACGACATACTGTGATTGTTCCTGTGGTAGATGGTGACGACGAGTTGCATTCCTCTTTATATTTTCTTACTGGTGAGAGATTGGAGAACAAGGTCAAATTAGATTGCTCACTTCCATTTCAATATCTTGGCCAAGATATTGTTATTGTCAGTTCTCGTAGTATCAATGGAATTCTTTGTGTTTCTGATAGAGGCGAAAGCAAGTTTGCTTTTTGGAACCCATCTACCAAGGAGTTTAAGATCATTCCTCCTAGTCCTATTGAAGCCACTACAACTTATCGGAACTGTTATCCACTTATTCTTGGATTCGGTTATGACCATGTAAGAGATGACTATAAGGTGATACGACATGTAAGATTTGATGAACTAAGTTTCCATGATTTGGCCATTCGTGGTTTGGAATTGAAAGACGTGCCATGGAAATATATATCATATCAACCCATATGGGAGATATATAGTCTAAGGAGCAACTCCTGGCGAGAAATTGATGTCAAACTTCCTATGAGGATGGACCGTTATAATGCTGCCTATATTGACCGATTCTATATAGATGGAATGTGTCACTGGTCATATATATATGATTTAGAAGAAACTTGTTTGGTATCATTTGACGTGAGCAATGAGGTATATTTTACAACACCTATGCCCGCATATGTGGACGATGGTTTAGATCATGGATTGGTGCCACAACGCTTGGTGATGTTATTTAATGGATTTGTGTCTTTGATTTCATATTATGAAGAGAAGACTACTTTTCACATATCAGTTTTGGGTGAAATTGGTGTGAGAGGATCATGGACTAAACTCTTTATTATTGATCTTTTACCTTGTGTTAAGCATCCCATTGGAGGAGGGAAGAATGGCAATATATTTTTCATAAAAGACAAAGGAGAACTTGTATGCTTTGATTTGGGTACCCTAATGATCGAAGAGCTTGTTGTCGAAGGCAATTTTAACATGATTAATCATGATGTCGCACAATCCAAACCCAAATCTAATTTTTGGCTGCAACTCGCACATATTGAGATCAAAGCTTTGACTGAAAATGATTATAAAGAAATCCAACAGGTAAAATCTTATCTTGATGCAAAATTCGAGGTCAAGGATATAGCCAATCTGCGATATTTCCTTGGTCTTGAAGTTGCGCGATCTCTTACTGATATTTATAGGAGCCTTATAAGGAGATTAATTTATCTTACAACGACACGACCTGACATTGCATTTGTTGTGCAACAATTAAGTCAGCATGTTTCACAACCTAGAGTTGTAGTACATTACAGGGCTGCTATTAGAATTCTTCAATACGTAAAATCTTTCTCAGCCAAAGGATTATTTTATGAACACAAAACTGATTTATCTCTCTCTGGTTTTGCAGATTCAGATTGGGCTACTTGCCCTACAACAAGACGGTCTGTGACAGGATATACTATTTTTCTAGGATCATCTTTGGTCTCATGGAAGTCTAAGAAGCAGTCTACCGTTTCAAGATCAAGTTGTGAGGCCGAGTATCGGGCTTTGGTTGCATTAACATATGAAGTGCAGTGGCTTCACACTCTGTTTACAGAACTGAATATAAAATTTCACAAACCAACATCATTATATTGTGACAACCGATCTGCAGTTTACCTAGCTCACAATCCAACTTTCCATGAATGTACCAAACACATCAAAATTGATTCCAATCTAATCCGTGAGAAAATAGAGCTTAGAATAATCAAACTTTTTCCTATTTCTTCCGGTGCATAG
Protein sequence

>MsG0280007168.01.T01

MGMGSPNPSGTWMRLNFSSPLGMGRVTSKYMRIMYEDVEDTSKMDSMNEKVCKHIHGDLALSITSKLPIKSLKRFGCVCKSWAILFQDPHFMNIYRNNFISKNHPDYYDTSYILRHTVIVPVVDGDDELHSSLYFLTGERLENKVKLDCSLPFQYLGQDIVIVSSRSINGILCVSDRGESKFAFWNPSTKEFKIIPPSPIEATTTYRNCYPLILGFGYDHVRDDYKVIRHVRFDELSFHDLAIRGLELKDVPWKYISYQPIWEIYSLRSNSWREIDVKLPMRMDRYNAAYIDRFYIDGMCHWSYIYDLEETCLVSFDVSNEVYFTTPMPAYVDDGLDHGLVPQRLVMLFNGFVSLISYYEEKTTFHISVLGEIGVRGSWTKLFIIDLLPCVKHPIGGGKNGNIFFIKDKGELVCFDLGTLMIEELVVEGNFNMINHDVAQSKPKSNFWLQLAHIEIKALTENDYKEIQQVKSYLDAKFEVKDIANLRYFLGLEVARSLTDIYRSLIRRLIYLTTTRPDIAFVVQQLSQHVSQPRVVVHYRAAIRILQYVKSFSAKGLFYEHKTDLSLSGFADSDWATCPTTRRSVTGYTIFLGSSLVSWKSKKQSTVSRSSCEAEYRALVALTYEVQWLHTLFTELNIKFHKPTSLYCDNRSAVYLAHNPTFHECTKHIKIDSNLIREKIELRIIKLFPISSGA*