AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001897.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001897.01.T02 MTR_4g007940 72.667 150 28 3 1 138 194 342 4.50e-67 206
MsG0180001897.01.T02 MTR_0831s0010 58.993 139 55 1 1 137 283 421 6.94e-47 156
MsG0180001897.01.T02 MTR_7g019250 62.931 116 41 1 1 114 298 413 2.98e-39 137
MsG0180001897.01.T02 MTR_0129s0120 50.370 135 67 0 1 135 260 394 2.11e-38 134
MsG0180001897.01.T02 MTR_8g063440 49.275 138 68 1 1 138 249 384 8.33e-37 129
MsG0180001897.01.T02 MTR_0129s0070 47.101 138 73 0 1 138 260 397 1.01e-36 129
MsG0180001897.01.T02 MTR_2g021800 48.175 137 69 1 2 138 283 417 1.83e-35 126
MsG0180001897.01.T02 MTR_2g022000 52.586 116 55 0 2 117 282 397 2.37e-34 124
MsG0180001897.01.T02 MTR_2g021920 51.515 132 61 2 1 131 138 267 2.66e-34 120
MsG0180001897.01.T02 MTR_2g104340 51.825 137 60 3 1 132 256 391 3.70e-34 122
MsG0180001897.01.T02 MTR_6g086825 47.015 134 71 0 1 134 324 457 5.83e-34 123
MsG0180001897.01.T02 MTR_5g069390 50.370 135 65 1 1 133 279 413 1.22e-33 122
MsG0180001897.01.T02 MTR_4g016000 78.205 78 13 2 13 86 112 189 5.07e-33 115
MsG0180001897.01.T02 MTR_5g097330 47.059 136 70 2 1 135 267 401 1.83e-32 118
MsG0180001897.01.T02 MTR_8g464770 46.565 131 68 1 1 131 246 374 2.42e-32 117
MsG0180001897.01.T02 MTR_5g097850 47.826 138 64 2 1 131 103 239 2.89e-32 114
MsG0180001897.01.T02 MTR_7g111700 48.551 138 69 2 1 138 231 366 4.43e-32 117
MsG0180001897.01.T02 MTR_8g063330 68.000 100 27 2 1 95 252 351 8.06e-32 117
MsG0180001897.01.T02 MTR_8g041270 50.365 137 62 3 1 132 266 401 1.42e-31 116
MsG0180001897.01.T02 MTR_5g059430 46.043 139 70 2 1 134 285 423 2.72e-31 115
MsG0180001897.01.T02 MTR_6g080680 45.038 131 72 0 1 131 259 389 5.35e-31 114
MsG0180001897.01.T02 MTR_0054s0090 44.203 138 77 0 1 138 270 407 6.96e-31 114
MsG0180001897.01.T02 MTR_5g037680 43.796 137 72 2 1 132 245 381 1.17e-30 114
MsG0180001897.01.T02 MTR_6g079730 43.704 135 76 0 1 135 14 148 1.69e-30 107
MsG0180001897.01.T02 MTR_6g090260 43.066 137 76 1 1 135 126 262 2.87e-30 110
MsG0180001897.01.T02 MTR_8g033000 48.227 141 65 3 1 133 219 359 4.97e-30 111
MsG0180001897.01.T02 MTR_1g007450 48.361 122 63 0 1 122 260 381 6.14e-30 112
MsG0180001897.01.T02 MTR_1g098180 45.833 144 62 3 1 133 224 362 6.95e-30 111
MsG0180001897.01.T02 MTR_2g021770 45.455 132 71 1 1 131 270 401 2.49e-29 110
MsG0180001897.01.T02 MTR_5g066420 43.307 127 71 1 1 126 23 149 3.55e-29 103
MsG0180001897.01.T02 MTR_2g038680 49.242 132 61 3 1 131 279 405 4.43e-29 109
MsG0180001897.01.T02 MTR_0054s0100 42.754 138 79 0 1 138 272 409 4.76e-29 109
MsG0180001897.01.T02 MTR_1g050312 51.908 131 55 3 1 126 157 284 4.83e-29 107
MsG0180001897.01.T02 MTR_2g104280 50.365 137 62 3 1 132 265 400 4.90e-29 109
MsG0180001897.01.T02 MTR_6g478230 42.857 147 75 2 1 138 262 408 5.04e-29 109
MsG0180001897.01.T02 MTR_5g064700 48.485 132 64 3 1 131 234 362 8.88e-29 108
MsG0180001897.01.T02 MTR_3g011120 49.206 126 60 1 1 126 248 369 1.36e-28 107
MsG0180001897.01.T02 MTR_2g021950 47.727 132 66 2 1 131 262 391 2.26e-28 107
MsG0180001897.01.T02 MTR_6g078010 45.865 133 68 2 1 131 199 329 4.85e-28 105
MsG0180001897.01.T02 MTR_4g028510 43.511 131 74 0 1 131 266 396 6.20e-28 107
MsG0180001897.01.T02 MTR_5g097680 48.485 132 64 3 1 131 293 421 6.37e-28 106
MsG0180001897.01.T02 MTR_6g090250 42.222 135 78 0 1 135 288 422 6.59e-28 106
MsG0180001897.01.T02 MTR_6g079810 43.609 133 71 2 1 131 327 457 9.10e-28 106
MsG0180001897.01.T02 MTR_4g130330 45.038 131 71 1 1 130 254 384 1.07e-27 105
MsG0180001897.01.T02 MTR_2g066150 45.070 142 71 3 1 138 223 361 1.38e-27 104
MsG0180001897.01.T02 MTR_6g090180 42.308 130 75 0 1 130 302 431 1.56e-27 105
MsG0180001897.01.T02 MTR_5g036250 52.000 100 47 1 34 133 9 107 1.57e-27 100
MsG0180001897.01.T02 MTR_2g066200 43.972 141 73 3 1 138 252 389 1.94e-27 104
MsG0180001897.01.T02 MTR_2g064950 46.154 130 66 3 1 128 253 380 2.38e-27 104
MsG0180001897.01.T02 MTR_8g033140 44.286 140 73 3 1 138 283 419 2.65e-27 104
MsG0180001897.01.T02 MTR_6g079770 41.985 131 76 0 1 131 281 411 2.71e-27 104
MsG0180001897.01.T02 MTR_5g097660 48.148 108 55 1 29 135 11 118 3.25e-27 98.2
MsG0180001897.01.T02 MTR_6g079790 42.143 140 79 1 1 138 171 310 4.24e-27 102
MsG0180001897.01.T02 MTR_8g064890 45.385 130 64 1 1 130 259 381 4.61e-27 103
MsG0180001897.01.T02 MTR_8g064790 46.154 130 65 2 1 130 206 330 5.08e-27 103
MsG0180001897.01.T02 MTR_4g028680 43.511 131 74 0 1 131 264 394 6.57e-27 103
MsG0180001897.01.T02 MTR_2g065860 45.000 140 74 2 1 138 251 389 8.29e-27 103
MsG0180001897.01.T02 MTR_5g043605 46.324 136 65 4 1 133 205 335 8.32e-27 102
MsG0180001897.01.T02 MTR_0134s0060 40.909 132 78 0 1 132 276 407 8.53e-27 103
MsG0180001897.01.T02 MTR_0129s0050 41.353 133 77 1 1 133 273 404 9.01e-27 103
MsG0180001897.01.T02 MTR_5g097220 43.796 137 69 2 1 135 276 406 1.02e-26 103
MsG0180001897.01.T02 MTR_8g032980 44.000 150 72 2 1 138 273 422 1.59e-26 102
MsG0180001897.01.T02 MTR_8g046200 43.382 136 72 2 1 135 289 420 2.03e-26 102
MsG0180001897.01.T02 MTR_4g028660 39.259 135 82 0 1 135 263 397 2.60e-26 102
MsG0180001897.01.T02 MTR_4g027450 39.259 135 82 0 1 135 263 397 2.60e-26 102
MsG0180001897.01.T02 MTR_2g066170 46.099 141 70 3 1 138 250 387 2.62e-26 101
MsG0180001897.01.T02 MTR_4g102410 42.647 136 76 2 1 134 312 447 2.64e-26 102
MsG0180001897.01.T02 MTR_5g074800 49.630 135 59 5 1 129 205 336 2.78e-26 101
MsG0180001897.01.T02 MTR_5g023970 46.094 128 64 2 1 126 60 184 3.74e-26 97.8
MsG0180001897.01.T02 MTR_8g012090 50.467 107 52 1 1 106 228 334 3.94e-26 100
MsG0180001897.01.T02 MTR_8g035690 44.526 137 67 3 1 133 168 299 5.02e-26 99.8
MsG0180001897.01.T02 MTR_5g096630 40.714 140 74 2 1 131 269 408 8.44e-26 100
MsG0180001897.01.T02 MTR_6g004450 45.038 131 67 2 1 131 138 263 8.75e-26 98.6
MsG0180001897.01.T02 MTR_4g014370 44.275 131 67 1 1 131 207 331 1.38e-25 99.4
MsG0180001897.01.T02 MTR_7g023800 40.625 128 76 0 1 128 175 302 2.23e-25 98.2
MsG0180001897.01.T02 MTR_2g034700 45.324 139 62 4 1 137 247 373 3.09e-25 98.6
MsG0180001897.01.T02 MTR_4g014370 44.275 131 67 1 1 131 279 403 3.68e-25 99.0
MsG0180001897.01.T02 MTR_6g461660 41.353 133 77 1 3 135 267 398 4.90e-25 98.6
MsG0180001897.01.T02 MTR_2g065840 45.185 135 67 3 1 131 252 383 6.33e-25 98.2
MsG0180001897.01.T02 MTR_5g068490 45.714 140 68 4 1 138 145 278 6.63e-25 96.3
MsG0180001897.01.T02 MTR_1g053510 42.857 133 75 1 1 133 271 402 6.64e-25 98.2
MsG0180001897.01.T02 MTR_8g046310 40.441 136 77 2 1 135 244 376 1.57e-24 97.1
MsG0180001897.01.T02 MTR_5g096910 40.602 133 74 3 1 131 258 387 1.73e-24 97.1
MsG0180001897.01.T02 MTR_3g030620 41.912 136 73 4 1 131 42 176 2.16e-24 92.8
MsG0180001897.01.T02 MTR_4g117550 41.985 131 52 2 1 131 261 367 2.31e-24 96.3
MsG0180001897.01.T02 MTR_2g022020 40.678 118 68 1 16 133 1 116 2.63e-24 90.5
MsG0180001897.01.T02 MTR_5g086590 47.899 119 59 1 1 119 123 238 3.31e-24 93.6
MsG0180001897.01.T02 MTR_7g069550 48.507 134 62 5 1 129 260 391 6.89e-24 95.5
MsG0180001897.01.T02 MTR_7g017040 41.985 131 75 1 1 131 263 392 7.06e-24 95.5
MsG0180001897.01.T02 MTR_8g046220 40.441 136 77 2 1 135 272 404 8.10e-24 95.1
MsG0180001897.01.T02 MTR_5g097350 41.481 135 72 3 1 135 258 385 1.33e-23 94.4
MsG0180001897.01.T02 MTR_5g022850 45.455 132 64 4 3 132 223 348 1.43e-23 94.0
MsG0180001897.01.T02 MTR_4g028750 43.478 115 63 1 1 115 264 376 2.48e-23 94.0
MsG0180001897.01.T02 MTR_8g036970 47.244 127 57 4 1 124 194 313 2.75e-23 93.6
MsG0180001897.01.T02 MTR_5g072060 48.718 117 54 3 1 112 232 347 3.12e-23 94.4
MsG0180001897.01.T02 MTR_7g079640 45.455 121 60 4 1 115 234 354 3.66e-23 93.2
MsG0180001897.01.T02 MTR_5g092860 49.123 114 51 2 1 114 244 350 5.82e-23 92.4
MsG0180001897.01.T02 MTR_7g017130 40.458 131 77 1 1 131 262 391 9.27e-23 92.4
MsG0180001897.01.T02 MTR_8g467670 42.748 131 69 2 1 130 247 372 1.55e-22 91.7
MsG0180001897.01.T02 MTR_6g087620 41.985 131 70 3 1 127 151 279 4.89e-22 89.0
MsG0180001897.01.T02 MTR_5g076490 47.015 134 67 3 1 131 198 330 2.89e-21 87.4
MsG0180001897.01.T02 MTR_8g063350 46.667 120 55 4 1 115 211 326 9.74e-21 86.3
MsG0180001897.01.T02 MTR_5g096920 35.294 136 79 3 1 132 17 147 1.38e-20 82.0
MsG0180001897.01.T02 MTR_5g091140 43.262 141 73 5 1 135 278 417 1.41e-20 86.3
MsG0180001897.01.T02 MTR_5g096050 53.165 79 37 0 1 79 30 108 1.53e-20 81.3
MsG0180001897.01.T02 MTR_1g007410 42.424 132 68 4 1 129 272 398 1.67e-20 86.3
MsG0180001897.01.T02 MTR_8g033110 42.282 149 65 5 1 134 270 412 2.35e-20 85.9
MsG0180001897.01.T02 MTR_7g017170 41.228 114 66 1 1 114 262 374 3.05e-20 85.5
MsG0180001897.01.T02 MTR_1g050308 43.363 113 55 2 4 114 222 327 3.80e-20 84.7
MsG0180001897.01.T02 MTR_8g033090 41.096 146 70 4 1 134 268 409 3.85e-20 85.1
MsG0180001897.01.T02 MTR_5g092850 42.143 140 68 5 1 135 269 400 7.90e-20 84.3
MsG0180001897.01.T02 MTR_8g018110 39.552 134 71 2 1 134 271 394 1.61e-19 83.2
MsG0180001897.01.T02 MTR_8g063310 36.986 146 82 4 1 137 253 397 2.28e-19 83.2
MsG0180001897.01.T02 MTR_3g018750 38.406 138 76 3 1 135 108 239 3.71e-19 80.5
MsG0180001897.01.T02 MTR_5g086780 38.679 106 65 0 8 113 123 228 4.61e-19 80.1
MsG0180001897.01.T02 MTR_4g055820 48.454 97 46 1 1 93 263 359 4.75e-19 81.6
MsG0180001897.01.T02 MTR_1g050305 55.422 83 32 2 38 115 21 103 5.67e-19 77.8
MsG0180001897.01.T02 MTR_8g039500 48.624 109 50 3 1 106 241 346 7.82e-19 81.3
MsG0180001897.01.T02 MTR_5g074850 41.176 119 66 3 1 117 288 404 6.84e-18 79.3
MsG0180001897.01.T02 MTR_8g013000 49.485 97 46 2 1 94 256 352 7.61e-17 75.9
MsG0180001897.01.T02 MTR_5g075370 37.815 119 70 3 1 117 264 380 1.71e-15 72.4
MsG0180001897.01.T02 MTR_8g063370 37.143 140 77 3 1 135 259 392 4.07e-15 70.9
MsG0180001897.01.T02 MTR_1g007430 48.000 75 39 0 1 75 230 304 5.98e-15 70.1
MsG0180001897.01.T02 MTR_5g097540 43.158 95 50 2 1 94 141 232 8.57e-15 69.7
MsG0180001897.01.T02 MTR_7g017150 38.346 133 79 3 1 131 131 262 1.53e-14 68.6
MsG0180001897.01.T02 MTR_7g017120 38.346 133 79 3 1 131 130 261 2.47e-14 68.2
MsG0180001897.01.T02 MTR_6g009350 44.000 100 51 3 1 100 101 195 1.63e-13 64.7
MsG0180001897.01.T02 MTR_5g024260 45.652 92 40 3 34 115 293 384 2.52e-12 63.2
MsG0180001897.01.T02 MTR_5g098950 47.297 74 39 0 21 94 200 273 8.62e-12 61.2
MsG0180001897.01.T02 MTR_4g106530 72.727 33 9 0 1 33 59 91 1.59e-11 57.0
MsG0180001897.01.T01 MTR_4g007940 73.333 285 53 3 1 263 59 342 2.09e-147 416
MsG0180001897.01.T01 MTR_0831s0010 56.000 275 108 1 1 262 147 421 7.15e-104 308
MsG0180001897.01.T01 MTR_4g016000 67.327 202 38 3 24 211 2 189 4.03e-88 261
MsG0180001897.01.T01 MTR_8g063330 59.322 236 78 3 1 220 118 351 8.76e-84 258
MsG0180001897.01.T01 MTR_7g019250 58.654 208 85 1 33 239 206 413 8.49e-75 235
MsG0180001897.01.T01 MTR_0129s0070 41.343 283 144 4 1 263 117 397 7.92e-67 213
MsG0180001897.01.T01 MTR_0129s0120 41.786 280 141 4 1 260 117 394 5.17e-66 211
MsG0180001897.01.T01 MTR_2g021800 40.614 293 134 7 5 263 131 417 7.20e-64 206
MsG0180001897.01.T01 MTR_8g063440 41.637 281 137 7 1 263 113 384 1.19e-62 201
MsG0180001897.01.T01 MTR_3g011120 45.693 267 116 7 1 251 116 369 2.35e-62 200
MsG0180001897.01.T01 MTR_8g064890 43.066 274 121 7 4 255 121 381 2.76e-60 196
MsG0180001897.01.T01 MTR_2g066200 41.522 289 129 9 1 263 115 389 3.17e-60 195
MsG0180001897.01.T01 MTR_2g066170 42.160 287 130 9 1 263 113 387 3.62e-60 195
MsG0180001897.01.T01 MTR_2g022000 41.758 273 119 8 5 242 130 397 1.17e-59 195
MsG0180001897.01.T01 MTR_8g464770 39.552 268 137 6 4 256 117 374 1.42e-59 193
MsG0180001897.01.T01 MTR_5g097330 40.217 276 141 8 3 260 132 401 1.34e-58 191
MsG0180001897.01.T01 MTR_2g104340 43.657 268 118 8 20 257 127 391 1.64e-58 191
MsG0180001897.01.T01 MTR_2g021770 39.146 281 139 6 5 256 124 401 3.16e-58 191
MsG0180001897.01.T01 MTR_5g069390 41.877 277 138 4 1 258 141 413 1.50e-56 189
MsG0180001897.01.T01 MTR_8g467670 39.051 274 130 7 1 255 117 372 1.99e-54 181
MsG0180001897.01.T01 MTR_1g050312 44.186 258 117 10 1 251 47 284 2.58e-54 177
MsG0180001897.01.T01 MTR_0129s0050 38.488 291 137 9 6 258 118 404 6.58e-53 177
MsG0180001897.01.T01 MTR_2g021950 38.545 275 140 6 5 256 123 391 1.44e-52 176
MsG0180001897.01.T01 MTR_6g086825 39.483 271 127 7 21 259 192 457 1.96e-51 174
MsG0180001897.01.T01 MTR_5g097220 37.748 302 135 7 4 260 113 406 2.42e-51 173
MsG0180001897.01.T01 MTR_6g080680 38.163 283 129 8 5 256 122 389 2.83e-51 172
MsG0180001897.01.T01 MTR_5g064700 41.328 271 119 7 21 256 97 362 5.90e-51 171
MsG0180001897.01.T01 MTR_0054s0090 37.543 293 142 8 5 263 122 407 8.45e-51 171
MsG0180001897.01.T01 MTR_2g065860 38.889 288 138 9 1 263 115 389 1.02e-50 171
MsG0180001897.01.T01 MTR_8g041270 41.155 277 132 8 9 257 128 401 1.41e-50 171
MsG0180001897.01.T01 MTR_7g017040 39.785 279 135 7 5 256 120 392 6.31e-50 169
MsG0180001897.01.T01 MTR_1g098180 40.551 254 124 7 20 258 121 362 1.07e-49 167
MsG0180001897.01.T01 MTR_0054s0100 36.610 295 146 8 4 263 121 409 1.16e-49 168
MsG0180001897.01.T01 MTR_2g104280 41.481 270 122 9 20 257 135 400 1.79e-49 168
MsG0180001897.01.T01 MTR_7g111700 38.462 273 142 8 3 263 108 366 2.84e-49 166
MsG0180001897.01.T01 MTR_5g059430 40.385 260 128 6 22 259 169 423 5.17e-49 167
MsG0180001897.01.T01 MTR_1g007450 40.074 272 136 7 1 247 112 381 8.60e-49 166
MsG0180001897.01.T01 MTR_5g097680 40.299 268 124 6 21 256 158 421 9.24e-49 166
MsG0180001897.01.T01 MTR_2g034700 39.716 282 126 9 1 263 118 374 1.69e-48 164
MsG0180001897.01.T01 MTR_8g033140 36.943 314 131 11 1 263 122 419 2.94e-48 165
MsG0180001897.01.T01 MTR_2g021920 40.171 234 109 5 51 256 37 267 3.31e-48 161
MsG0180001897.01.T01 MTR_5g043605 40.000 260 112 7 22 258 97 335 4.40e-48 163
MsG0180001897.01.T01 MTR_8g046200 36.688 308 128 10 4 260 129 420 6.02e-48 164
MsG0180001897.01.T01 MTR_2g066150 39.114 271 141 8 1 263 107 361 6.94e-48 162
MsG0180001897.01.T01 MTR_1g053510 37.075 294 134 9 4 258 121 402 1.22e-47 163
MsG0180001897.01.T01 MTR_7g017130 37.591 274 142 7 5 256 125 391 1.49e-47 162
MsG0180001897.01.T01 MTR_5g037680 38.129 278 133 9 1 257 122 381 2.26e-47 163
MsG0180001897.01.T01 MTR_5g024260 40.149 269 120 8 4 240 125 384 2.98e-47 162
MsG0180001897.01.T01 MTR_5g068490 38.603 272 127 9 6 263 33 278 4.78e-47 158
MsG0180001897.01.T01 MTR_4g117550 36.462 277 130 7 1 258 120 369 5.28e-47 160
MsG0180001897.01.T01 MTR_5g096630 37.895 285 142 8 5 256 126 408 7.39e-47 161
MsG0180001897.01.T01 MTR_4g102410 35.789 285 155 8 1 259 165 447 7.91e-47 162
MsG0180001897.01.T01 MTR_8g032980 36.909 317 133 9 4 263 116 422 2.11e-46 160
MsG0180001897.01.T01 MTR_6g090180 37.879 264 133 7 20 255 171 431 3.02e-46 160
MsG0180001897.01.T01 MTR_5g074800 41.343 283 129 13 1 254 62 336 3.04e-46 158
MsG0180001897.01.T01 MTR_8g064790 39.689 257 107 6 4 255 117 330 3.74e-46 157
MsG0180001897.01.T01 MTR_5g097350 36.630 273 140 8 4 260 130 385 4.30e-46 159
MsG0180001897.01.T01 MTR_8g046310 37.184 277 129 9 4 260 125 376 5.07e-46 158
MsG0180001897.01.T01 MTR_4g055820 41.736 242 108 7 6 218 122 359 2.11e-45 156
MsG0180001897.01.T01 MTR_0134s0060 34.354 294 149 8 5 257 117 407 2.62e-45 157
MsG0180001897.01.T01 MTR_2g038680 36.678 289 140 9 4 256 124 405 4.26e-45 156
MsG0180001897.01.T01 MTR_6g078010 36.299 281 128 7 6 256 70 329 4.27e-45 155
MsG0180001897.01.T01 MTR_7g017170 37.743 257 131 7 5 239 125 374 5.05e-45 156
MsG0180001897.01.T01 MTR_4g014370 33.993 303 139 6 1 256 115 403 2.11e-44 155
MsG0180001897.01.T01 MTR_2g065840 38.571 280 130 10 4 256 119 383 2.49e-44 154
MsG0180001897.01.T01 MTR_6g090250 33.226 310 151 8 4 260 116 422 2.87e-44 154
MsG0180001897.01.T01 MTR_7g069550 39.860 286 127 13 1 254 119 391 2.88e-44 154
MsG0180001897.01.T01 MTR_4g028510 35.540 287 141 9 4 256 120 396 5.11e-44 155
MsG0180001897.01.T01 MTR_5g022850 37.282 287 142 10 1 257 70 348 5.39e-44 152
MsG0180001897.01.T01 MTR_4g028660 32.056 287 157 7 4 260 119 397 8.01e-44 153
MsG0180001897.01.T01 MTR_4g027450 32.056 287 157 7 4 260 119 397 8.01e-44 153
MsG0180001897.01.T01 MTR_1g007410 37.500 280 134 11 5 254 130 398 9.52e-44 153
MsG0180001897.01.T01 MTR_6g461660 37.354 257 136 8 22 260 149 398 1.23e-43 152
MsG0180001897.01.T01 MTR_6g079810 33.910 289 149 7 6 256 173 457 1.26e-43 154
MsG0180001897.01.T01 MTR_7g079640 37.692 260 121 8 1 240 116 354 1.57e-43 152
MsG0180001897.01.T01 MTR_4g028680 34.138 290 153 8 4 263 120 401 4.58e-43 151
MsG0180001897.01.T01 MTR_8g033000 35.644 303 140 8 4 258 64 359 6.41e-43 150
MsG0180001897.01.T01 MTR_8g039500 41.245 257 108 11 1 231 107 346 7.19e-43 149
MsG0180001897.01.T01 MTR_4g130330 34.495 287 145 8 4 255 106 384 7.75e-43 150
MsG0180001897.01.T01 MTR_8g012090 40.260 231 117 7 3 231 123 334 1.09e-42 148
MsG0180001897.01.T01 MTR_6g079790 34.471 293 155 8 4 263 22 310 2.51e-42 147
MsG0180001897.01.T01 MTR_6g004450 37.398 246 125 6 31 256 27 263 1.27e-41 144
MsG0180001897.01.T01 MTR_8g063350 36.900 271 122 9 1 240 74 326 1.80e-41 145
MsG0180001897.01.T01 MTR_8g046220 35.052 291 123 9 20 260 130 404 2.79e-41 146
MsG0180001897.01.T01 MTR_8g036970 37.918 269 89 9 1 249 103 313 2.83e-41 145
MsG0180001897.01.T01 MTR_6g478230 34.520 281 126 7 21 263 148 408 9.66e-41 145
MsG0180001897.01.T01 MTR_5g096910 35.636 275 137 11 4 256 131 387 1.15e-40 144
MsG0180001897.01.T01 MTR_5g086590 40.164 244 112 8 18 244 12 238 1.25e-40 140
MsG0180001897.01.T01 MTR_2g064950 36.879 282 124 12 7 253 118 380 2.49e-40 144
MsG0180001897.01.T01 MTR_8g035690 36.462 277 109 10 32 258 40 299 1.82e-39 139
MsG0180001897.01.T01 MTR_7g023800 33.955 268 128 8 4 253 66 302 7.47e-39 137
MsG0180001897.01.T01 MTR_5g092850 33.893 298 148 10 4 260 111 400 9.93e-39 139
MsG0180001897.01.T01 MTR_5g076490 40.288 278 125 10 15 256 58 330 1.60e-38 137
MsG0180001897.01.T01 MTR_6g079770 33.333 291 152 8 6 256 123 411 1.62e-38 139
MsG0180001897.01.T01 MTR_5g092860 38.235 272 115 11 12 239 88 350 1.66e-38 138
MsG0180001897.01.T01 MTR_8g033110 34.727 311 131 13 4 259 119 412 1.71e-38 139
MsG0180001897.01.T01 MTR_4g028750 33.600 250 127 7 20 240 137 376 1.94e-38 139
MsG0180001897.01.T01 MTR_5g023970 42.632 190 81 6 81 251 4 184 3.54e-37 130
MsG0180001897.01.T01 MTR_5g072060 40.637 251 126 10 1 237 106 347 9.58e-37 137
MsG0180001897.01.T01 MTR_6g090260 39.583 192 93 4 90 260 73 262 1.38e-36 130
MsG0180001897.01.T01 MTR_8g063370 32.753 287 152 8 1 260 120 392 2.10e-36 133
MsG0180001897.01.T01 MTR_8g013000 38.136 236 120 6 7 219 120 352 2.33e-36 133
MsG0180001897.01.T01 MTR_5g074850 34.783 276 134 9 6 242 136 404 4.20e-35 133
MsG0180001897.01.T01 MTR_7g016930 39.320 206 103 6 5 193 104 304 9.14e-35 127
MsG0180001897.01.T01 MTR_4g106530 52.033 123 23 2 30 152 1 87 1.26e-34 120
MsG0180001897.01.T01 MTR_5g097850 41.436 181 81 5 97 256 63 239 1.48e-34 125
MsG0180001897.01.T01 MTR_3g018750 34.553 246 118 6 50 260 2 239 2.07e-34 124
MsG0180001897.01.T01 MTR_1g007430 37.395 238 128 8 1 223 96 327 2.18e-34 126
MsG0180001897.01.T01 MTR_3g019290 63.736 91 33 0 5 95 85 175 3.49e-34 122
MsG0180001897.01.T01 MTR_1g050308 34.711 242 103 7 1 239 138 327 1.93e-33 124
MsG0180001897.01.T01 MTR_8g033090 34.028 288 127 10 20 259 137 409 2.34e-33 125
MsG0180001897.01.T01 MTR_4g014370 39.247 186 84 3 92 256 154 331 2.56e-33 124
MsG0180001897.01.T01 MTR_8g018110 31.313 297 143 7 4 259 118 394 3.69e-33 124
MsG0180001897.01.T01 MTR_8g063310 30.690 290 163 8 1 262 118 397 1.19e-32 123
MsG0180001897.01.T01 MTR_5g091140 36.842 266 126 12 26 260 163 417 2.67e-32 122
MsG0180001897.01.T01 MTR_5g075370 33.094 278 138 9 6 242 110 380 4.82e-32 124
MsG0180001897.01.T01 MTR_6g087620 32.700 263 111 8 22 252 51 279 1.16e-31 118
MsG0180001897.01.T01 MTR_6g079730 43.796 137 75 1 124 260 14 148 8.69e-30 109
MsG0180001897.01.T01 MTR_5g066420 40.667 150 83 2 107 251 1 149 2.41e-29 108
MsG0180001897.01.T01 MTR_3g030620 42.138 159 86 4 103 256 19 176 5.90e-29 108
MsG0180001897.01.T01 MTR_5g098950 35.648 216 90 6 21 219 90 273 7.53e-29 110
MsG0180001897.01.T01 MTR_6g009350 37.056 197 93 6 51 225 8 195 3.53e-27 104
MsG0180001897.01.T01 MTR_5g096900 36.946 203 95 6 1 185 126 313 3.86e-27 107
MsG0180001897.01.T01 MTR_5g036250 51.485 101 48 1 158 258 8 107 3.69e-26 101
MsG0180001897.01.T01 MTR_5g097660 49.038 104 52 1 158 260 15 118 2.56e-25 97.4
MsG0180001897.01.T01 MTR_5g097540 40.972 144 67 4 89 219 94 232 3.85e-24 99.0
MsG0180001897.01.T01 MTR_5g094350 35.429 175 77 5 4 142 99 273 6.62e-24 97.8
MsG0180001897.01.T01 MTR_7g017150 35.450 189 100 5 87 256 77 262 1.33e-23 96.7
MsG0180001897.01.T01 MTR_7g017120 35.450 189 100 5 87 256 76 261 1.85e-23 96.3
MsG0180001897.01.T01 MTR_2g022020 40.833 120 67 2 139 258 1 116 4.35e-22 88.6
MsG0180001897.01.T01 MTR_5g096920 33.553 152 95 3 107 257 1 147 2.92e-21 87.4
MsG0180001897.01.T01 MTR_5g096050 43.636 110 48 2 107 204 1 108 1.76e-19 82.0
MsG0180001897.01.T01 MTR_5g086780 28.634 227 105 4 13 238 58 228 4.22e-19 84.0
MsG0180001897.01.T01 MTR_1g050305 51.546 97 38 3 153 240 7 103 1.75e-18 80.1
MsG0180001897.01.T01 MTR_7g101200 30.973 226 94 12 20 219 39 228 8.91e-17 77.4
MsG0180001897.01.T01 MTR_2g104260 33.121 157 77 6 6 136 123 277 4.43e-15 73.6
MsG0180001897.01.T01 MTR_1g047080 27.273 275 126 12 5 258 58 279 5.04e-15 73.6
MsG0180001897.01.T01 MTR_5g097820 34.074 135 64 4 9 128 145 269 6.05e-15 73.2
MsG0180001897.01.T01 MTR_4g117720 26.394 269 146 9 20 258 124 370 6.83e-15 73.9
MsG0180001897.01.T01 MTR_7g104710 28.293 205 76 8 5 177 121 286 2.08e-14 72.0
MsG0180001897.01.T01 MTR_8g101580 25.926 243 134 9 7 231 143 357 6.64e-13 68.2
MsG0180001897.01.T01 MTR_5g037190 33.566 143 70 7 1 129 118 249 8.50e-13 66.6
MsG0180001897.01.T01 MTR_1g097330 27.053 207 114 7 7 197 112 297 6.73e-12 65.5
MsG0180001897.01.T01 MTR_4g094400 34.146 123 63 4 104 210 7 127 1.41e-11 60.8
MsG0180001897.01.T01 MTR_1g115205 36.207 116 42 5 29 115 125 237 1.85e-11 63.2
MsG0180001897.01.T01 MTR_1g076810 26.506 166 107 4 6 166 124 279 3.42e-11 63.5
MsG0180001897.01.T03 MTR_4g007940 77.320 97 21 1 1 97 247 342 6.22e-47 153
MsG0180001897.01.T03 MTR_0831s0010 67.778 90 29 0 1 90 326 415 4.05e-35 124
MsG0180001897.01.T03 MTR_5g069390 56.044 91 40 0 2 92 323 413 6.05e-27 102
MsG0180001897.01.T03 MTR_5g036250 54.444 90 40 1 3 92 19 107 8.90e-27 97.4
MsG0180001897.01.T03 MTR_7g019250 65.753 73 25 0 1 73 341 413 1.84e-26 101
MsG0180001897.01.T03 MTR_0129s0120 52.222 90 43 0 1 90 301 390 2.20e-26 100
MsG0180001897.01.T03 MTR_2g021800 50.515 97 46 1 1 97 323 417 7.28e-26 99.4
MsG0180001897.01.T03 MTR_8g063440 51.546 97 47 0 1 97 288 384 2.16e-25 97.4
MsG0180001897.01.T03 MTR_2g022000 57.895 76 32 0 1 76 322 397 3.60e-25 97.4
MsG0180001897.01.T03 MTR_2g021920 56.667 90 37 1 1 90 180 267 4.56e-25 94.7
MsG0180001897.01.T03 MTR_0129s0070 48.889 90 46 0 1 90 301 390 4.88e-25 96.7
MsG0180001897.01.T03 MTR_6g079730 46.809 94 50 0 1 94 55 148 1.51e-24 90.5
MsG0180001897.01.T03 MTR_7g111700 51.042 96 46 1 2 97 272 366 1.03e-23 92.8
MsG0180001897.01.T03 MTR_5g097330 49.474 95 47 1 1 94 307 401 1.11e-23 93.2
MsG0180001897.01.T03 MTR_5g097660 47.368 95 49 1 1 94 24 118 1.54e-23 87.4
MsG0180001897.01.T03 MTR_6g086825 47.312 93 49 0 1 93 365 457 1.76e-23 92.8
MsG0180001897.01.T03 MTR_1g098180 47.059 102 44 1 1 92 261 362 4.44e-23 91.3
MsG0180001897.01.T03 MTR_8g033000 52.874 87 41 0 6 92 273 359 5.70e-23 90.9
MsG0180001897.01.T03 MTR_0054s0090 46.392 97 52 0 1 97 311 407 8.04e-23 90.9
MsG0180001897.01.T03 MTR_2g104340 54.651 86 38 1 6 91 307 391 1.13e-22 90.5
MsG0180001897.01.T03 MTR_5g059430 51.613 93 44 1 2 93 331 423 1.38e-22 90.1
MsG0180001897.01.T03 MTR_4g117550 54.054 74 34 0 17 90 294 367 1.68e-22 89.7
MsG0180001897.01.T03 MTR_5g066420 51.282 78 38 0 8 85 72 149 2.33e-22 85.1
MsG0180001897.01.T03 MTR_5g097850 52.809 89 41 1 2 90 152 239 2.72e-22 87.4
MsG0180001897.01.T03 MTR_8g046310 45.263 95 51 1 1 94 282 376 2.74e-22 89.0
MsG0180001897.01.T03 MTR_8g046200 48.421 95 48 1 1 94 326 420 3.70e-22 89.0
MsG0180001897.01.T03 MTR_0129s0050 45.652 92 49 1 1 92 314 404 4.05e-22 89.0
MsG0180001897.01.T03 MTR_8g035690 50.526 95 40 2 2 92 208 299 4.40e-22 87.8
MsG0180001897.01.T03 MTR_6g078010 50.000 90 45 0 1 90 240 329 4.45e-22 88.2
MsG0180001897.01.T03 MTR_6g478230 45.361 97 53 0 1 97 312 408 4.50e-22 89.0
MsG0180001897.01.T03 MTR_8g464770 47.778 90 47 0 1 90 285 374 4.85e-22 88.6
MsG0180001897.01.T03 MTR_4g014370 52.500 80 38 0 11 90 252 331 1.55e-21 86.7
MsG0180001897.01.T03 MTR_2g038680 52.941 85 39 1 7 90 321 405 2.54e-21 86.7
MsG0180001897.01.T03 MTR_5g068490 48.454 97 48 2 1 97 184 278 2.90e-21 85.1
MsG0180001897.01.T03 MTR_8g046220 44.211 95 52 1 1 94 310 404 3.00e-21 86.3
MsG0180001897.01.T03 MTR_8g041270 56.790 81 34 1 11 91 322 401 3.18e-21 86.3
MsG0180001897.01.T03 MTR_3g011120 51.163 86 42 0 1 86 285 370 3.77e-21 85.9
MsG0180001897.01.T03 MTR_5g097220 48.958 96 47 1 1 94 311 406 4.12e-21 86.3
MsG0180001897.01.T03 MTR_5g037680 43.617 94 49 1 2 91 288 381 4.78e-21 86.3
MsG0180001897.01.T03 MTR_0054s0100 46.237 93 50 0 5 97 317 409 4.94e-21 85.9
MsG0180001897.01.T03 MTR_6g080680 45.556 90 49 0 1 90 300 389 6.72e-21 85.5
MsG0180001897.01.T03 MTR_4g014370 48.889 90 46 0 1 90 314 403 8.61e-21 85.1
MsG0180001897.01.T03 MTR_8g032980 48.889 90 46 0 8 97 333 422 9.36e-21 85.1
MsG0180001897.01.T03 MTR_2g065860 49.451 91 44 1 1 89 291 381 1.03e-20 84.7
MsG0180001897.01.T03 MTR_2g066170 48.000 100 49 2 1 97 288 387 1.60e-20 84.3
MsG0180001897.01.T03 MTR_1g007450 51.852 81 39 0 1 81 301 381 2.05e-20 84.3
MsG0180001897.01.T03 MTR_2g066200 45.000 100 52 2 1 97 290 389 2.50e-20 84.0
MsG0180001897.01.T03 MTR_6g079810 45.556 90 49 0 1 90 368 457 3.70e-20 83.6
MsG0180001897.01.T03 MTR_2g021950 50.000 90 43 1 1 90 304 391 4.02e-20 83.2
MsG0180001897.01.T03 MTR_0134s0060 43.956 91 51 0 1 91 317 407 4.15e-20 83.2
MsG0180001897.01.T03 MTR_5g043605 47.312 93 47 2 1 92 244 335 5.08e-20 82.8
MsG0180001897.01.T03 MTR_6g079790 43.299 97 55 0 1 97 214 310 5.82e-20 82.0
MsG0180001897.01.T03 MTR_8g033140 46.237 93 49 1 6 97 327 419 7.13e-20 82.8
MsG0180001897.01.T03 MTR_4g130330 48.889 90 45 1 1 89 295 384 1.68e-19 81.6
MsG0180001897.01.T03 MTR_5g097350 45.745 94 49 2 1 94 294 385 2.01e-19 81.3
MsG0180001897.01.T03 MTR_2g104280 52.874 87 40 1 5 91 315 400 2.16e-19 81.3
MsG0180001897.01.T03 MTR_6g090260 42.708 96 53 1 1 94 167 262 2.50e-19 79.7
MsG0180001897.01.T03 MTR_8g064790 48.315 89 46 0 1 89 242 330 3.08e-19 80.5
MsG0180001897.01.T03 MTR_1g050312 53.333 90 37 2 1 85 195 284 4.72e-19 79.3
MsG0180001897.01.T03 MTR_2g022020 42.857 91 50 1 1 91 27 115 4.78e-19 75.5
MsG0180001897.01.T03 MTR_2g065840 48.936 94 44 2 1 90 290 383 6.75e-19 79.7
MsG0180001897.01.T03 MTR_2g021770 44.444 90 50 0 1 90 312 401 8.25e-19 79.7
MsG0180001897.01.T03 MTR_4g028680 44.444 90 50 0 1 90 305 394 9.91e-19 79.3
MsG0180001897.01.T03 MTR_4g102410 46.316 95 49 2 1 93 353 447 1.13e-18 79.3
MsG0180001897.01.T03 MTR_4g028510 44.444 90 50 0 1 90 307 396 1.50e-18 79.0
MsG0180001897.01.T03 MTR_8g064890 47.191 89 47 0 1 89 293 381 1.56e-18 79.0
MsG0180001897.01.T03 MTR_8g036970 51.163 86 39 2 1 83 228 313 1.80e-18 78.6
MsG0180001897.01.T03 MTR_6g079770 44.444 90 50 0 1 90 322 411 2.08e-18 78.6
MsG0180001897.01.T03 MTR_6g090250 41.489 94 55 0 1 94 329 422 2.80e-18 78.2
MsG0180001897.01.T03 MTR_1g053510 45.882 85 46 0 8 92 318 402 2.98e-18 78.2
MsG0180001897.01.T03 MTR_6g090180 42.697 89 51 0 1 89 343 431 4.12e-18 77.8
MsG0180001897.01.T03 MTR_2g064950 48.315 89 42 3 1 87 294 380 5.86e-18 77.4
MsG0180001897.01.T03 MTR_2g066150 43.564 101 53 2 1 97 261 361 6.83e-18 77.0
MsG0180001897.01.T03 MTR_6g004450 46.429 84 45 0 7 90 180 263 8.24e-18 75.9
MsG0180001897.01.T03 MTR_4g016000 80.000 45 9 0 1 45 145 189 9.44e-18 74.7
MsG0180001897.01.T03 MTR_2g034700 44.898 98 49 2 1 96 279 373 9.54e-18 76.6
MsG0180001897.01.T03 MTR_4g028660 39.362 94 57 0 1 94 304 397 1.15e-17 76.6
MsG0180001897.01.T03 MTR_4g027450 39.362 94 57 0 1 94 304 397 1.15e-17 76.6
MsG0180001897.01.T03 MTR_8g018110 46.988 83 44 0 11 93 312 394 1.15e-17 76.6
MsG0180001897.01.T03 MTR_1g050305 54.430 79 31 2 1 74 25 103 1.20e-17 72.8
MsG0180001897.01.T03 MTR_5g074800 53.333 90 37 4 1 88 250 336 1.31e-17 75.9
MsG0180001897.01.T03 MTR_8g467670 46.067 89 48 0 1 89 284 372 1.44e-17 76.3
MsG0180001897.01.T03 MTR_7g079640 51.316 76 35 2 1 74 279 354 3.26e-17 75.1
MsG0180001897.01.T03 MTR_8g012090 56.250 64 28 0 2 65 271 334 4.47e-17 74.3
MsG0180001897.01.T03 MTR_5g096910 42.857 91 50 2 2 90 297 387 6.16e-17 74.3
MsG0180001897.01.T03 MTR_3g030620 44.048 84 45 2 8 90 94 176 9.98e-17 71.2
MsG0180001897.01.T03 MTR_5g023970 48.718 78 40 0 8 85 107 184 1.47e-16 71.2
MsG0180001897.01.T03 MTR_8g033090 47.312 93 41 3 5 93 321 409 1.77e-16 73.2
MsG0180001897.01.T03 MTR_7g069550 49.438 89 42 3 1 88 305 391 2.31e-16 72.8
MsG0180001897.01.T03 MTR_8g033110 45.918 98 41 3 2 93 321 412 2.55e-16 72.8
MsG0180001897.01.T03 MTR_5g086780 47.887 71 37 0 2 72 158 228 2.91e-16 71.2
MsG0180001897.01.T03 MTR_5g096630 42.424 99 48 2 1 90 310 408 3.60e-16 72.4
MsG0180001897.01.T03 MTR_8g063330 70.370 54 16 0 1 54 298 351 4.65e-16 72.0
MsG0180001897.01.T03 MTR_6g087620 46.914 81 42 1 7 86 199 279 6.21e-16 70.9
MsG0180001897.01.T03 MTR_7g023800 41.379 87 51 0 1 87 216 302 6.50e-16 71.2
MsG0180001897.01.T03 MTR_5g097680 48.889 90 43 2 1 90 335 421 7.01e-16 71.6
MsG0180001897.01.T03 MTR_1g050308 50.667 75 35 1 1 73 253 327 1.20e-15 70.5
MsG0180001897.01.T03 MTR_5g096920 40.244 82 48 1 11 91 66 147 1.64e-15 67.4
MsG0180001897.01.T03 MTR_5g022850 44.565 92 48 2 2 91 258 348 2.38e-15 69.7
MsG0180001897.01.T03 MTR_5g072060 54.167 72 31 2 1 71 277 347 2.40e-15 70.1
MsG0180001897.01.T03 MTR_8g063350 49.367 79 35 2 1 74 248 326 3.34e-15 69.3
MsG0180001897.01.T03 MTR_5g064700 46.667 90 45 2 1 90 276 362 1.02e-14 68.2
MsG0180001897.01.T03 MTR_1g007410 44.444 90 44 3 2 88 312 398 1.39e-14 67.8
MsG0180001897.01.T03 MTR_5g091140 44.898 98 50 3 1 94 320 417 2.25e-14 67.4
MsG0180001897.01.T03 MTR_7g017130 40.000 90 54 0 1 90 302 391 2.44e-14 67.0
MsG0180001897.01.T03 MTR_7g017040 41.111 90 53 0 1 90 303 392 3.52e-14 66.6
MsG0180001897.01.T03 MTR_4g028750 43.243 74 42 0 1 74 303 376 3.52e-14 66.6
MsG0180001897.01.T03 MTR_8g063310 37.755 98 59 1 1 96 300 397 4.20e-14 66.6
MsG0180001897.01.T03 MTR_6g461660 40.426 94 55 1 1 94 306 398 4.33e-14 66.2
MsG0180001897.01.T03 MTR_5g086590 52.055 73 32 1 6 78 169 238 8.87e-14 64.7
MsG0180001897.01.T03 MTR_8g013000 59.259 54 21 1 1 53 299 352 2.60e-13 64.3
MsG0180001897.01.T03 MTR_5g092860 49.315 73 36 1 1 73 279 350 3.43e-13 63.9
MsG0180001897.01.T03 MTR_5g092850 41.237 97 54 2 1 94 304 400 3.72e-13 63.9
MsG0180001897.01.T03 MTR_7g017170 41.096 73 43 0 1 73 302 374 4.59e-12 60.8
MsG0180001897.01.T03 MTR_5g076490 48.352 91 45 2 1 90 241 330 1.03e-11 59.7
MsG0180001897.01.T03 MTR_3g018750 40.217 92 52 2 6 94 148 239 1.05e-11 58.9
MsG0180001897.01.T03 MTR_5g074850 45.714 70 37 1 8 76 335 404 1.10e-11 59.7
MsG0180001897.01.T03 MTR_8g063370 43.038 79 40 2 1 74 294 372 4.84e-11 57.8
MsG0180001897.01.T03 MTR_8g039500 47.761 67 33 1 1 65 280 346 8.09e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 56 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAACACCACGCCCATTT+TGG 0.149041 1:-28980424 MsG0180001897.01.T01:CDS
ATCTTATGGTCGTCATTAAA+AGG 0.200610 1:+28980509 None:intergenic
ACACTATAAATCTCCCAAAA+TGG 0.202809 1:+28980410 None:intergenic
TTCTTTCGTTTCGCCGATTT+AGG 0.217831 1:-28979878 MsG0180001897.01.T01:CDS
ATTGAAGATATGGGTGTTAA+AGG 0.227033 1:-28979942 MsG0180001897.01.T01:CDS
TTTGACTTGGTGGTGTTAAA+TGG 0.231992 1:-28980176 MsG0180001897.01.T01:CDS
ACCATCGATTTGTTGCATTA+TGG 0.239651 1:-28980631 MsG0180001897.01.T01:CDS
TATACTGATATGTTGGATTC+TGG 0.248324 1:-28980686 None:intergenic
TACCCCAACAATTGAAGATA+TGG 0.304240 1:-28979952 MsG0180001897.01.T01:CDS
ATTATGGAATCCAGCTAATA+AGG 0.306906 1:-28980615 MsG0180001897.01.T01:CDS
CACCCATATCTTCAATTGTT+GGG 0.319396 1:+28979949 None:intergenic
TAACCTGACGAATGATCTTA+TGG 0.335462 1:+28980495 None:intergenic
TGAAAACAAACAGTATAAAA+AGG 0.337469 1:+28980554 None:intergenic
TTGAAGATATGGGTGTTAAA+GGG 0.356178 1:-28979941 MsG0180001897.01.T01:CDS
ATTTGAATGGATTGTGTCAT+TGG 0.366794 1:-28980361 MsG0180001897.01.T01:CDS
AACCTGATGACAACTTTGAT+TGG 0.367119 1:-28980457 MsG0180001897.01.T01:CDS
GTTTCGCCGATTTAGGAATT+AGG 0.379469 1:-28979871 None:intergenic
AAAAGACCTAATTCCTAAAT+CGG 0.397822 1:+28979865 None:intergenic
TGGAAGAGGCTTAATTTGAA+TGG 0.408357 1:-28980374 MsG0180001897.01.T01:CDS
CACTATAAATCTCCCAAAAT+GGG 0.426316 1:+28980411 None:intergenic
ATCTATGGTTTGGGTGAACT+TGG 0.429147 1:-28980107 MsG0180001897.01.T01:CDS
GTCCAATCAAAGTTGTCATC+AGG 0.430056 1:+28980455 None:intergenic
CAAAATGGGCGTGGTGTTGT+TGG 0.430366 1:+28980425 None:intergenic
TGGACTAAACTCTTCATTGT+TGG 0.431221 1:-28980071 MsG0180001897.01.T01:CDS
TTGACTTGGTGGTGTTAAAT+GGG 0.433750 1:-28980175 MsG0180001897.01.T01:CDS
AATTATAGCTGATGCATACA+TGG 0.469264 1:-28980327 MsG0180001897.01.T01:CDS
AACTTGGTGTTAGCGAATCA+TGG 0.472503 1:-28980091 MsG0180001897.01.T01:CDS
CTCCTTAGTACCCACTCATC+AGG 0.480423 1:+28980236 None:intergenic
ATAGTGTAAGAAGTAACTCT+TGG 0.480890 1:-28980394 MsG0180001897.01.T01:CDS
TAAATCGGCGAAACGAAAGA+AGG 0.489451 1:+28979880 None:intergenic
GCATAGATACTTTGACTTGG+TGG 0.509941 1:-28980186 MsG0180001897.01.T01:intron
AAAATGGGCGTGGTGTTGTT+GGG 0.511585 1:+28980426 None:intergenic
CGACCATAAGATCATTCGTC+AGG 0.514960 1:-28980498 MsG0180001897.01.T01:CDS
ATAGCTATCTTGCATATCCA+TGG 0.515407 1:+28980259 None:intergenic
CTAACAGGACACTCCACGTT+AGG 0.516631 1:+28980041 None:intergenic
ACCCCAACAATTGAAGATAT+GGG 0.527532 1:-28979951 MsG0180001897.01.T01:CDS
ACACCCATATCTTCAATTGT+TGG 0.530019 1:+28979948 None:intergenic
ATCCTGATGAGTGGGTACTA+AGG 0.535030 1:-28980238 MsG0180001897.01.T01:intron
TCTTATGGTCGTCATTAAAA+GGG 0.535486 1:+28980510 None:intergenic
GAGTGGGTACTAAGGAGAGA+AGG 0.539541 1:-28980230 MsG0180001897.01.T01:intron
TGAAGATATGGGTGTTAAAG+GGG 0.539805 1:-28979940 MsG0180001897.01.T01:CDS
CTTTACTACACATTTACCCA+TGG 0.540466 1:-28980276 MsG0180001897.01.T01:CDS
ACCCATATCTTCAATTGTTG+GGG 0.553324 1:+28979950 None:intergenic
GAATGGATTGTGTCATTGGT+GGG 0.553829 1:-28980357 MsG0180001897.01.T01:CDS
TGTTGGACCCTTGCCTAACG+TGG 0.554900 1:-28980054 MsG0180001897.01.T01:CDS
TAAGAAGTAACTCTTGGAAG+AGG 0.559800 1:-28980388 MsG0180001897.01.T01:CDS
AGGACACTCCACGTTAGGCA+AGG 0.578365 1:+28980046 None:intergenic
GATCTCAAAGCATGTAAAGA+CGG 0.579951 1:-28980141 MsG0180001897.01.T01:CDS
TCCATAATGCAACAAATCGA+TGG 0.582817 1:+28980630 None:intergenic
TGAATGGATTGTGTCATTGG+TGG 0.588735 1:-28980358 MsG0180001897.01.T01:CDS
TAAATCTCCCAAAATGGGCG+TGG 0.594499 1:+28980416 None:intergenic
TAGCTATCTTGCATATCCAT+GGG 0.611434 1:+28980260 None:intergenic
GGACACTCCACGTTAGGCAA+GGG 0.617305 1:+28980047 None:intergenic
AAGATAGCTATCCTGATGAG+TGG 0.630767 1:-28980247 MsG0180001897.01.T01:CDS
AGATAGCTATCCTGATGAGT+GGG 0.641843 1:-28980246 MsG0180001897.01.T01:CDS
GGTGCATAGATACTTTGACT+TGG 0.674752 1:-28980189 MsG0180001897.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTTATAAAAAATGACAA+TGG - Chr1:28980553-28980572 MsG0180001897.01.T01:CDS 15.0%
!! TGAAAACAAACAGTATAAAA+AGG + Chr1:28979998-28980017 None:intergenic 20.0%
AAAAAGGTAAAAACTCAGCT+AGG + Chr1:28979982-28980001 None:intergenic 30.0%
AATTATAGCTGATGCATACA+TGG - Chr1:28980222-28980241 MsG0180001897.01.T01:intron 30.0%
ACACTATAAATCTCCCAAAA+TGG + Chr1:28980142-28980161 None:intergenic 30.0%
ATAGTGTAAGAAGTAACTCT+TGG - Chr1:28980155-28980174 MsG0180001897.01.T01:CDS 30.0%
ATCTTATGGTCGTCATTAAA+AGG + Chr1:28980043-28980062 None:intergenic 30.0%
ATTATGGAATCCAGCTAATA+AGG - Chr1:28979934-28979953 MsG0180001897.01.T01:CDS 30.0%
ATTGAAGATATGGGTGTTAA+AGG - Chr1:28980607-28980626 MsG0180001897.01.T01:CDS 30.0%
CACTATAAATCTCCCAAAAT+GGG + Chr1:28980141-28980160 None:intergenic 30.0%
TCTTATGGTCGTCATTAAAA+GGG + Chr1:28980042-28980061 None:intergenic 30.0%
TTGAAGATATGGGTGTTAAA+GGG - Chr1:28980608-28980627 MsG0180001897.01.T01:CDS 30.0%
! GTTTTCAATTCCTTATTAGC+TGG + Chr1:28979947-28979966 None:intergenic 30.0%
! TCTTTTCACATCTATGGTTT+GGG - Chr1:28980433-28980452 MsG0180001897.01.T01:CDS 30.0%
! TGTTTTCATCTTCATGGATA+TGG - Chr1:28980010-28980029 MsG0180001897.01.T01:CDS 30.0%
! TTCTTTTCACATCTATGGTT+TGG - Chr1:28980432-28980451 MsG0180001897.01.T01:CDS 30.0%
!! ACTGTTTGTTTTCATCTTCA+TGG - Chr1:28980004-28980023 MsG0180001897.01.T01:CDS 30.0%
!! ATTTGAATGGATTGTGTCAT+TGG - Chr1:28980188-28980207 MsG0180001897.01.T01:intron 30.0%
AACCTGATGACAACTTTGAT+TGG - Chr1:28980092-28980111 MsG0180001897.01.T01:CDS 35.0%
AAGGTGACAATGATGATAAG+TGG - Chr1:28980338-28980357 MsG0180001897.01.T01:CDS 35.0%
ACACCCATATCTTCAATTGT+TGG + Chr1:28980604-28980623 None:intergenic 35.0%
ACCCATATCTTCAATTGTTG+GGG + Chr1:28980602-28980621 None:intergenic 35.0%
ACCCCAACAATTGAAGATAT+GGG - Chr1:28980598-28980617 MsG0180001897.01.T01:CDS 35.0%
AGGTGACAATGATGATAAGT+GGG - Chr1:28980339-28980358 MsG0180001897.01.T01:CDS 35.0%
ATAGCTATCTTGCATATCCA+TGG + Chr1:28980293-28980312 None:intergenic 35.0%
CACCCATATCTTCAATTGTT+GGG + Chr1:28980603-28980622 None:intergenic 35.0%
CCTGTTAGAGCAAGAAAAAT+AGG - Chr1:28980523-28980542 MsG0180001897.01.T01:CDS 35.0%
CTTTACTACACATTTACCCA+TGG - Chr1:28980273-28980292 MsG0180001897.01.T01:CDS 35.0%
GATCTCAAAGCATGTAAAGA+CGG - Chr1:28980408-28980427 MsG0180001897.01.T01:CDS 35.0%
TAACCTGACGAATGATCTTA+TGG + Chr1:28980057-28980076 None:intergenic 35.0%
TAAGAAGTAACTCTTGGAAG+AGG - Chr1:28980161-28980180 MsG0180001897.01.T01:CDS 35.0%
TACCCCAACAATTGAAGATA+TGG - Chr1:28980597-28980616 MsG0180001897.01.T01:CDS 35.0%
TAGCTATCTTGCATATCCAT+GGG + Chr1:28980292-28980311 None:intergenic 35.0%
TCCATAATGCAACAAATCGA+TGG + Chr1:28979922-28979941 None:intergenic 35.0%
TGAAGATATGGGTGTTAAAG+GGG - Chr1:28980609-28980628 MsG0180001897.01.T01:CDS 35.0%
TGGACTAAACTCTTCATTGT+TGG - Chr1:28980478-28980497 MsG0180001897.01.T01:CDS 35.0%
! TGGAAGAGGCTTAATTTGAA+TGG - Chr1:28980175-28980194 MsG0180001897.01.T01:CDS 35.0%
!! ACCATCGATTTGTTGCATTA+TGG - Chr1:28979918-28979937 MsG0180001897.01.T01:CDS 35.0%
!! CCTATTTTTCTTGCTCTAAC+AGG + Chr1:28980526-28980545 None:intergenic 35.0%
!! TTGACTTGGTGGTGTTAAAT+GGG - Chr1:28980374-28980393 MsG0180001897.01.T01:CDS 35.0%
!! TTTGACTTGGTGGTGTTAAA+TGG - Chr1:28980373-28980392 MsG0180001897.01.T01:CDS 35.0%
AAGATAGCTATCCTGATGAG+TGG - Chr1:28980302-28980321 MsG0180001897.01.T01:CDS 40.0%
AGATAGCTATCCTGATGAGT+GGG - Chr1:28980303-28980322 MsG0180001897.01.T01:CDS 40.0%
GGTGCATAGATACTTTGACT+TGG - Chr1:28980360-28980379 MsG0180001897.01.T01:CDS 40.0%
GTCCAATCAAAGTTGTCATC+AGG + Chr1:28980097-28980116 None:intergenic 40.0%
TAAATCGGCGAAACGAAAGA+AGG + Chr1:28980672-28980691 None:intergenic 40.0%
! ACGGCTTCTTTTCACATCTA+TGG - Chr1:28980427-28980446 MsG0180001897.01.T01:CDS 40.0%
! ATCTATGGTTTGGGTGAACT+TGG - Chr1:28980442-28980461 MsG0180001897.01.T01:CDS 40.0%
!! AACTTGGTGTTAGCGAATCA+TGG - Chr1:28980458-28980477 MsG0180001897.01.T01:CDS 40.0%
!! GAATGGATTGTGTCATTGGT+GGG - Chr1:28980192-28980211 MsG0180001897.01.T01:intron 40.0%
!! GCATAGATACTTTGACTTGG+TGG - Chr1:28980363-28980382 MsG0180001897.01.T01:CDS 40.0%
!! TGAATGGATTGTGTCATTGG+TGG - Chr1:28980191-28980210 MsG0180001897.01.T01:intron 40.0%
!! TTCTTTCGTTTCGCCGATTT+AGG - Chr1:28980671-28980690 MsG0180001897.01.T01:CDS 40.0%
AAAAACTCAGCTAGGCTAGG+CGG + Chr1:28979974-28979993 None:intergenic 45.0%
ATCCTGATGAGTGGGTACTA+AGG - Chr1:28980311-28980330 MsG0180001897.01.T01:CDS 45.0%
CGACCATAAGATCATTCGTC+AGG - Chr1:28980051-28980070 MsG0180001897.01.T01:CDS 45.0%
GGTAAAAACTCAGCTAGGCT+AGG + Chr1:28979977-28979996 None:intergenic 45.0%
TAAATCTCCCAAAATGGGCG+TGG + Chr1:28980136-28980155 None:intergenic 45.0%
! AACAACACCACGCCCATTTT+GGG - Chr1:28980126-28980145 MsG0180001897.01.T01:CDS 45.0%
!! AAAATGGGCGTGGTGTTGTT+GGG + Chr1:28980126-28980145 None:intergenic 45.0%
CTAACAGGACACTCCACGTT+AGG + Chr1:28980511-28980530 None:intergenic 50.0%
CTCCTTAGTACCCACTCATC+AGG + Chr1:28980316-28980335 None:intergenic 50.0%
GAGTGGGTACTAAGGAGAGA+AGG - Chr1:28980319-28980338 MsG0180001897.01.T01:CDS 50.0%
! CAACAACACCACGCCCATTT+TGG - Chr1:28980125-28980144 MsG0180001897.01.T01:CDS 50.0%
!! CAAAATGGGCGTGGTGTTGT+TGG + Chr1:28980127-28980146 None:intergenic 50.0%
AGGACACTCCACGTTAGGCA+AGG + Chr1:28980506-28980525 None:intergenic 55.0%
GGACACTCCACGTTAGGCAA+GGG + Chr1:28980505-28980524 None:intergenic 55.0%
TGTTGGACCCTTGCCTAACG+TGG - Chr1:28980495-28980514 MsG0180001897.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 28979872 28980699 28979872 ID=MsG0180001897.01;Name=MsG0180001897.01
Chr1 mRNA 28979872 28980699 28979872 ID=MsG0180001897.01.T01;Parent=MsG0180001897.01;Name=MsG0180001897.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0|0|2|0|263
Chr1 exon 28979872 28980202 28979872 ID=MsG0180001897.01.T01:exon:18908;Parent=MsG0180001897.01.T01
Chr1 exon 28980239 28980699 28980239 ID=MsG0180001897.01.T01:exon:18907;Parent=MsG0180001897.01.T01
Chr1 CDS 28980239 28980699 28980239 ID=MsG0180001897.01.T01:cds;Parent=MsG0180001897.01.T01
Chr1 CDS 28979872 28980202 28979872 ID=MsG0180001897.01.T01:cds;Parent=MsG0180001897.01.T01
Chr1 mRNA 28979872 28980330 28979872 ID=MsG0180001897.01.T02;Parent=MsG0180001897.01;Name=MsG0180001897.01.T02;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|0|0|2|0|138
Chr1 exon 28979872 28980188 28979872 ID=MsG0180001897.01.T02:exon:18910;Parent=MsG0180001897.01.T02
Chr1 exon 28980231 28980330 28980231 ID=MsG0180001897.01.T02:exon:18909;Parent=MsG0180001897.01.T02
Chr1 CDS 28980231 28980330 28980231 ID=MsG0180001897.01.T02:cds;Parent=MsG0180001897.01.T02
Chr1 CDS 28979872 28980188 28979872 ID=MsG0180001897.01.T02:cds;Parent=MsG0180001897.01.T02
Chr1 mRNA 28979872 28980165 28979872 ID=MsG0180001897.01.T03;Parent=MsG0180001897.01;Name=MsG0180001897.01.T03;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|0|1|0|97
Chr1 exon 28979872 28980165 28979872 ID=MsG0180001897.01.T03:exon:18911;Parent=MsG0180001897.01.T03
Chr1 CDS 28979872 28980165 28979872 ID=MsG0180001897.01.T03:cds;Parent=MsG0180001897.01.T03
Gene Sequence

>MsG0180001897.01.T02

ATGGTTTCTTTTGACTTGAGAAATGAGAACTTCTTTACTACACATTTACCCATGGATATGCAAGATAGCTATCCTGATGAGTGGGTACTAAGGAGAGAAGTGGTGTTAAATGGGTTCGTTGCTATGATCTCAAAGCATGTAAAGACGGCTTCTTTTCACATCTATGGTTTGGGTGAACTTGGTGTTAGCGAATCATGGACTAAACTCTTCATTGTTGGACCCTTGCCTAACGTGGAGTGTCCTGTTAGAGCAAGAAAAATAGGTGATATATTCTTTATAAAAAATGACAATGGAATAGCTTGTTTTGATTTACATACCCCAACAATTGAAGATATGGGTGTTAAAGGGGAGTCTTTTTGTTGTCACTTTGCAATTTATAAGAAAAACCTTCTTTCGTTTCGCCGATTTAGGAATTAG

>MsG0180001897.01.T01

ATGTTGGATTCTGGTATTAATGACGTTCTTTGTTTCTCTGATCTTAACCATCGATTTGTTGCATTATGGAATCCAGCTAATAAGGAATTGAAAACTATTCCGCCTAGCCTAGCTGAGTTTTTACCTTTTTATACTGTTTGTTTTCATCTTCATGGATATGGTTATGACCCTTTTAATGACGACCATAAGATCATTCGTCAGGTTAAAGTTAGTAAATATAAACCTGATGACAACTTTGATTGGACTTATCTCCCAACAACACCACGCCCATTTTGGGAGATTTATAGTGTAAGAAGTAACTCTTGGAAGAGGCTTAATTTGAATGGATTGTGTCATTGGTGGGCGAGTACAATTATAGCTGATGCATACATGGTTTCTTTTGACTTGAGAAATGAGAACTTCTTTACTACACATTTACCCATGGATATGCAAGATAGCTATCCTGATGAGTGGGTACTAAGATACTTTGACTTGGTGGTGTTAAATGGGTTCGTTGCTATGATCTCAAAGCATGTAAAGACGGCTTCTTTTCACATCTATGGTTTGGGTGAACTTGGTGTTAGCGAATCATGGACTAAACTCTTCATTGTTGGACCCTTGCCTAACGTGGAGTGTCCTGTTAGAGCAAGAAAAATAGGTGATATATTCTTTATAAAAAATGACAATGGAATAGCTTGTTTTGATTTACATACCCCAACAATTGAAGATATGGGTGTTAAAGGGGAGTCTTTTTGTTGTCACTTTGCAATTTATAAGAAAAACCTTCTTTCGTTTCGCCGATTTAGGAATTAG

>MsG0180001897.01.T03

ATGATCTCAAAGCATGTAAAGACGGCTTCTTTTCACATCTATGGTTTGGGTGAACTTGGTGTTAGCGAATCATGGACTAAACTCTTCATTGTTGGACCCTTGCCTAACGTGGAGTGTCCTGTTAGAGCAAGAAAAATAGGTGATATATTCTTTATAAAAAATGACAATGGAATAGCTTGTTTTGATTTACATACCCCAACAATTGAAGATATGGGTGTTAAAGGGGAGTCTTTTTGTTGTCACTTTGCAATTTATAAGAAAAACCTTCTTTCGTTTCGCCGATTTAGGAATTAG
Protein sequence

>MsG0180001897.01.T02

MVSFDLRNENFFTTHLPMDMQDSYPDEWVLRREVVLNGFVAMISKHVKTASFHIYGLGELGVSESWTKLFIVGPLPNVECPVRARKIGDIFFIKNDNGIACFDLHTPTIEDMGVKGESFCCHFAIYKKNLLSFRRFRN*

>MsG0180001897.01.T01

MLDSGINDVLCFSDLNHRFVALWNPANKELKTIPPSLAEFLPFYTVCFHLHGYGYDPFNDDHKIIRQVKVSKYKPDDNFDWTYLPTTPRPFWEIYSVRSNSWKRLNLNGLCHWWASTIIADAYMVSFDLRNENFFTTHLPMDMQDSYPDEWVLRYFDLVVLNGFVAMISKHVKTASFHIYGLGELGVSESWTKLFIVGPLPNVECPVRARKIGDIFFIKNDNGIACFDLHTPTIEDMGVKGESFCCHFAIYKKNLLSFRRFRN*

>MsG0180001897.01.T03

MISKHVKTASFHIYGLGELGVSESWTKLFIVGPLPNVECPVRARKIGDIFFIKNDNGIACFDLHTPTIEDMGVKGESFCCHFAIYKKNLLSFRRFRN*