AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028082.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028082.01.T01 MTR_5g068490 81.919 271 49 0 87 357 8 278 7.63e-159 446
MsG0580028082.01.T01 MTR_5g043605 59.030 371 89 9 6 356 12 339 8.95e-134 386
MsG0580028082.01.T01 MTR_3g011120 52.000 375 144 14 1 345 1 369 9.63e-107 317
MsG0580028082.01.T01 MTR_1g098180 48.101 395 139 13 1 357 1 367 1.90e-103 309
MsG0580028082.01.T01 MTR_8g467670 47.558 389 163 13 1 357 1 380 1.24e-98 298
MsG0580028082.01.T01 MTR_5g024260 47.949 390 148 15 1 341 7 390 1.37e-94 288
MsG0580028082.01.T01 MTR_0831s0010 44.898 392 162 16 2 351 37 416 3.25e-94 287
MsG0580028082.01.T01 MTR_8g063440 43.915 378 177 10 13 357 9 384 5.40e-94 285
MsG0580028082.01.T01 MTR_2g066170 45.153 392 175 14 1 357 1 387 5.88e-93 283
MsG0580028082.01.T01 MTR_2g066200 45.570 395 171 15 1 357 1 389 1.22e-92 282
MsG0580028082.01.T01 MTR_0129s0120 44.501 391 176 11 1 351 2 391 2.11e-92 282
MsG0580028082.01.T01 MTR_0129s0070 43.577 397 183 11 1 357 2 397 1.63e-91 280
MsG0580028082.01.T01 MTR_8g064890 46.410 390 163 14 1 351 1 383 2.13e-91 279
MsG0580028082.01.T01 MTR_4g028510 43.860 399 174 14 1 351 1 397 7.16e-91 280
MsG0580028082.01.T01 MTR_2g034700 47.520 383 153 15 1 349 1 369 1.33e-89 274
MsG0580028082.01.T01 MTR_0054s0100 44.584 397 165 14 14 357 15 409 1.67e-89 275
MsG0580028082.01.T01 MTR_0054s0090 44.810 395 165 14 14 357 15 407 1.68e-89 275
MsG0580028082.01.T01 MTR_5g097330 42.239 393 178 12 13 357 13 404 6.76e-87 268
MsG0580028082.01.T01 MTR_4g130330 43.782 386 169 12 12 351 3 386 1.08e-85 265
MsG0580028082.01.T01 MTR_6g086825 41.667 396 181 12 12 357 66 461 1.02e-83 261
MsG0580028082.01.T01 MTR_4g028660 39.747 395 191 12 1 350 1 393 2.02e-83 259
MsG0580028082.01.T01 MTR_4g027450 39.747 395 191 12 1 350 1 393 2.02e-83 259
MsG0580028082.01.T01 MTR_8g046310 43.386 378 184 12 1 352 1 374 2.13e-83 258
MsG0580028082.01.T01 MTR_5g037680 40.310 387 189 11 9 355 1 385 8.49e-83 259
MsG0580028082.01.T01 MTR_7g069550 42.448 384 170 13 13 348 11 391 3.04e-82 256
MsG0580028082.01.T01 MTR_5g097220 41.604 399 168 12 13 351 10 403 3.41e-82 256
MsG0580028082.01.T01 MTR_0134s0060 42.927 410 170 13 1 350 1 406 6.08e-82 255
MsG0580028082.01.T01 MTR_6g080680 42.105 380 172 15 13 350 16 389 8.16e-82 254
MsG0580028082.01.T01 MTR_2g066150 43.122 378 177 13 1 357 1 361 3.18e-81 252
MsG0580028082.01.T01 MTR_2g021950 40.609 394 189 14 1 351 1 392 5.29e-81 253
MsG0580028082.01.T01 MTR_8g039500 44.602 352 163 13 1 326 1 346 2.62e-80 249
MsG0580028082.01.T01 MTR_4g028680 41.089 404 188 16 1 357 1 401 4.21e-80 250
MsG0580028082.01.T01 MTR_8g064790 44.865 370 147 14 1 351 1 332 8.57e-80 248
MsG0580028082.01.T01 MTR_7g017130 40.155 386 190 12 6 351 8 392 1.35e-79 249
MsG0580028082.01.T01 MTR_8g464770 42.120 368 181 9 13 350 9 374 2.07e-79 248
MsG0580028082.01.T01 MTR_2g022000 39.850 399 170 14 2 337 6 397 4.50e-79 249
MsG0580028082.01.T01 MTR_2g104340 40.157 381 182 9 14 350 12 390 2.38e-78 246
MsG0580028082.01.T01 MTR_6g079770 41.667 408 158 17 14 351 15 412 5.80e-78 245
MsG0580028082.01.T01 MTR_8g012090 45.773 343 136 11 13 326 13 334 7.19e-78 243
MsG0580028082.01.T01 MTR_2g038680 40.554 397 175 13 13 351 13 406 1.84e-77 244
MsG0580028082.01.T01 MTR_7g017170 40.489 368 179 11 6 334 8 374 2.14e-77 244
MsG0580028082.01.T01 MTR_2g021800 38.095 420 188 15 2 357 6 417 2.57e-77 244
MsG0580028082.01.T01 MTR_4g102410 41.860 387 176 14 14 351 59 445 2.98e-77 244
MsG0580028082.01.T01 MTR_5g097680 38.369 417 171 15 13 351 14 422 3.12e-77 244
MsG0580028082.01.T01 MTR_4g028750 39.788 377 184 12 1 335 1 376 4.16e-77 243
MsG0580028082.01.T01 MTR_2g021770 38.424 406 177 14 16 357 12 408 5.15e-77 243
MsG0580028082.01.T01 MTR_5g096630 39.846 389 178 13 19 351 21 409 1.42e-76 242
MsG0580028082.01.T01 MTR_1g007450 42.973 370 160 13 14 336 10 375 2.34e-76 241
MsG0580028082.01.T01 MTR_2g065840 41.207 381 173 14 15 351 11 384 9.40e-76 239
MsG0580028082.01.T01 MTR_4g117550 42.063 378 155 14 13 350 14 367 1.27e-75 238
MsG0580028082.01.T01 MTR_8g033140 39.762 420 179 14 4 357 8 419 3.24e-75 238
MsG0580028082.01.T01 MTR_6g079810 39.950 403 182 14 7 351 58 458 3.45e-75 239
MsG0580028082.01.T01 MTR_6g478230 38.750 400 185 12 8 357 19 408 3.46e-75 238
MsG0580028082.01.T01 MTR_0129s0050 41.206 398 172 15 13 352 11 404 7.44e-75 237
MsG0580028082.01.T01 MTR_4g055820 41.547 349 155 8 13 313 11 358 1.04e-74 235
MsG0580028082.01.T01 MTR_6g090180 40.051 392 180 13 13 351 44 433 1.13e-73 235
MsG0580028082.01.T01 MTR_7g017040 40.759 395 185 13 1 351 4 393 1.29e-73 234
MsG0580028082.01.T01 MTR_2g065860 41.237 388 178 15 13 357 9 389 3.14e-73 232
MsG0580028082.01.T01 MTR_7g079640 41.417 367 166 14 16 347 13 365 7.57e-73 231
MsG0580028082.01.T01 MTR_8g041270 38.817 389 185 10 14 350 13 400 1.07e-72 231
MsG0580028082.01.T01 MTR_8g032980 40.235 425 176 17 4 357 5 422 1.89e-72 231
MsG0580028082.01.T01 MTR_8g046200 38.551 428 177 16 1 352 1 418 5.83e-72 230
MsG0580028082.01.T01 MTR_1g053510 38.971 408 184 14 2 352 3 402 1.08e-71 229
MsG0580028082.01.T01 MTR_1g007410 39.594 394 184 15 5 348 9 398 1.16e-71 229
MsG0580028082.01.T01 MTR_5g096910 37.949 390 199 14 1 351 3 388 1.23e-71 228
MsG0580028082.01.T01 MTR_2g064950 40.769 390 168 14 9 347 3 380 1.61e-71 228
MsG0580028082.01.T01 MTR_5g097350 40.822 365 171 15 25 351 25 382 2.22e-71 228
MsG0580028082.01.T01 MTR_5g059430 37.192 406 193 13 8 352 18 422 3.90e-71 228
MsG0580028082.01.T01 MTR_5g069390 36.776 397 198 14 8 352 18 413 4.35e-71 230
MsG0580028082.01.T01 MTR_8g046220 38.425 419 174 17 1 352 1 402 2.98e-70 225
MsG0580028082.01.T01 MTR_7g111700 39.950 398 158 13 7 357 3 366 3.01e-69 221
MsG0580028082.01.T01 MTR_8g013000 40.470 383 167 15 14 349 8 376 5.82e-69 222
MsG0580028082.01.T01 MTR_4g014370 38.903 401 179 12 13 351 8 404 1.24e-68 221
MsG0580028082.01.T01 MTR_8g036970 43.988 341 132 13 20 338 2 305 1.63e-68 219
MsG0580028082.01.T01 MTR_8g063370 37.330 367 192 10 14 347 22 383 9.50e-68 218
MsG0580028082.01.T01 MTR_2g104280 39.433 388 184 9 14 350 12 399 5.66e-67 217
MsG0580028082.01.T01 MTR_6g461660 39.018 387 181 16 13 351 16 395 9.64e-67 216
MsG0580028082.01.T01 MTR_6g078010 39.458 332 164 10 52 351 4 330 2.45e-66 213
MsG0580028082.01.T01 MTR_4g007940 40.762 341 153 13 63 357 5 342 2.95e-66 213
MsG0580028082.01.T01 MTR_7g016930 43.279 305 132 9 13 289 13 304 9.00e-66 211
MsG0580028082.01.T01 MTR_5g092850 36.896 393 182 15 15 351 15 397 8.74e-65 211
MsG0580028082.01.T01 MTR_8g018110 37.164 409 184 13 1 352 1 393 2.01e-64 210
MsG0580028082.01.T01 MTR_5g072060 41.484 364 148 15 14 332 4 347 2.48e-64 215
MsG0580028082.01.T01 MTR_5g091140 37.275 389 185 14 1 347 36 407 1.05e-63 209
MsG0580028082.01.T01 MTR_6g090250 38.325 394 166 15 34 352 29 420 2.46e-63 207
MsG0580028082.01.T01 MTR_8g033110 37.762 429 180 17 1 356 1 415 5.12e-63 207
MsG0580028082.01.T01 MTR_5g074850 37.789 389 183 14 1 337 23 404 1.21e-61 213
MsG0580028082.01.T01 MTR_8g063330 38.746 351 166 12 1 309 1 344 1.28e-61 204
MsG0580028082.01.T01 MTR_1g007430 41.543 337 129 11 27 315 7 323 2.05e-60 197
MsG0580028082.01.T01 MTR_1g050308 35.770 383 163 11 1 357 23 348 5.29e-60 197
MsG0580028082.01.T01 MTR_8g033090 38.575 407 176 17 12 352 10 408 9.93e-60 198
MsG0580028082.01.T01 MTR_1g050312 43.011 279 131 8 72 336 10 274 1.24e-59 194
MsG0580028082.01.T01 MTR_5g022850 37.789 389 156 14 3 350 4 347 3.12e-59 195
MsG0580028082.01.T01 MTR_8g063310 34.565 379 197 16 13 348 19 389 1.32e-58 195
MsG0580028082.01.T01 MTR_5g074800 38.166 338 165 10 52 348 2 336 3.28e-55 184
MsG0580028082.01.T01 MTR_5g075370 35.958 381 183 15 13 337 5 380 4.03e-55 193
MsG0580028082.01.T01 MTR_4g014370 35.734 361 163 8 13 351 19 332 1.42e-52 177
MsG0580028082.01.T01 MTR_5g064700 34.711 363 165 13 56 351 6 363 1.66e-50 173
MsG0580028082.01.T01 MTR_5g092860 33.425 362 173 13 23 335 9 351 2.21e-50 172
MsG0580028082.01.T01 MTR_7g104710 39.877 326 139 13 11 305 12 311 2.95e-50 171
MsG0580028082.01.T01 MTR_6g087620 38.384 297 135 12 79 346 2 279 1.05e-49 168
MsG0580028082.01.T01 MTR_6g079790 36.013 311 154 10 90 357 2 310 1.07e-49 169
MsG0580028082.01.T01 MTR_5g096900 38.125 320 152 11 1 281 1 313 9.59e-49 167
MsG0580028082.01.T01 MTR_8g063350 34.584 373 178 13 3 348 4 337 1.48e-48 167
MsG0580028082.01.T01 MTR_2g021920 41.350 237 106 7 147 351 33 268 1.12e-47 162
MsG0580028082.01.T01 MTR_7g023800 38.658 313 163 10 52 347 2 302 1.34e-47 163
MsG0580028082.01.T01 MTR_5g086590 43.162 234 114 9 120 339 10 238 2.06e-47 161
MsG0580028082.01.T01 MTR_5g076490 35.629 334 153 10 65 351 13 331 6.06e-47 162
MsG0580028082.01.T01 MTR_6g004450 42.466 219 105 6 151 351 49 264 7.51e-43 150
MsG0580028082.01.T01 MTR_5g097850 39.313 262 107 7 111 355 18 244 2.22e-42 148
MsG0580028082.01.T01 MTR_6g090260 42.784 194 88 6 176 352 73 260 1.04e-41 147
MsG0580028082.01.T01 MTR_6g090260 52.308 65 25 2 1 61 7 69 5.18e-11 62.8
MsG0580028082.01.T01 MTR_1g076810 44.144 222 89 9 13 202 15 233 1.20e-41 154
MsG0580028082.01.T01 MTR_6g070880 39.331 239 94 8 6 196 22 257 8.05e-41 144
MsG0580028082.01.T01 MTR_6g071420 39.331 239 94 8 6 196 22 257 8.05e-41 144
MsG0580028082.01.T01 MTR_5g094350 35.943 281 108 10 13 240 10 271 2.63e-40 143
MsG0580028082.01.T01 MTR_5g097820 34.252 254 132 8 8 227 16 268 8.36e-39 139
MsG0580028082.01.T01 MTR_5g023970 43.386 189 100 5 176 357 9 197 7.79e-38 134
MsG0580028082.01.T01 MTR_8g033000 48.969 194 79 9 174 352 171 359 3.28e-37 137
MsG0580028082.01.T01 MTR_4g016000 38.614 202 96 5 128 311 2 193 1.36e-36 132
MsG0580028082.01.T01 MTR_3g018750 36.626 243 113 7 151 356 3 241 2.69e-36 132
MsG0580028082.01.T01 MTR_7g019250 37.719 228 102 7 137 339 206 418 1.74e-35 135
MsG0580028082.01.T01 MTR_8g035690 36.364 264 117 8 136 352 40 299 9.77e-35 129
MsG0580028082.01.T01 MTR_8g073570 43.452 168 81 4 9 162 3 170 5.84e-34 124
MsG0580028082.01.T01 MTR_6g465360 38.723 235 90 7 1 185 51 281 2.12e-33 125
MsG0580028082.01.T01 MTR_6g009350 39.267 191 93 6 148 318 5 192 3.42e-33 122
MsG0580028082.01.T01 MTR_5g098950 37.736 212 87 6 123 315 88 273 8.56e-33 124
MsG0580028082.01.T01 MTR_5g037190 34.686 271 115 11 1 230 1 250 1.12e-32 122
MsG0580028082.01.T01 MTR_1g115205 35.443 237 101 7 7 212 20 235 1.45e-32 122
MsG0580028082.01.T01 MTR_7g017120 34.874 238 129 9 120 338 16 246 7.06e-32 121
MsG0580028082.01.T01 MTR_2g104260 36.131 274 128 9 7 237 8 277 7.44e-31 118
MsG0580028082.01.T01 MTR_7g017150 34.310 239 130 9 120 338 16 247 7.90e-31 118
MsG0580028082.01.T01 MTR_6g079730 48.889 135 61 4 224 352 14 146 3.38e-29 110
MsG0580028082.01.T01 MTR_3g019290 36.493 211 69 7 4 184 3 178 1.21e-28 110
MsG0580028082.01.T01 MTR_3g047580 48.299 147 46 6 1 137 1 127 5.46e-28 106
MsG0580028082.01.T01 MTR_5g096920 40.541 148 83 4 206 350 1 146 6.93e-26 101
MsG0580028082.01.T01 MTR_5g097650 46.324 136 60 6 13 140 19 149 1.84e-25 100
MsG0580028082.01.T01 MTR_3g030620 36.585 164 91 4 198 350 15 176 3.38e-25 100
MsG0580028082.01.T01 MTR_5g066420 40.000 150 79 6 206 345 1 149 4.13e-24 97.1
MsG0580028082.01.T01 MTR_5g096070 41.290 155 65 5 13 159 23 159 1.31e-23 95.9
MsG0580028082.01.T01 MTR_5g097540 39.286 140 81 2 177 315 96 232 3.58e-23 98.2
MsG0580028082.01.T01 MTR_7g101200 36.019 211 105 8 124 320 39 233 4.79e-23 96.7
MsG0580028082.01.T01 MTR_5g091150 36.250 160 80 5 111 266 45 186 5.16e-23 95.5
MsG0580028082.01.T01 MTR_1g047080 30.000 300 138 13 77 352 28 279 7.55e-23 97.1
MsG0580028082.01.T01 MTR_1g097560 27.545 334 211 14 18 334 38 357 1.48e-22 97.8
MsG0580028082.01.T01 MTR_5g097660 48.077 104 51 3 252 352 13 116 1.95e-22 91.7
MsG0580028082.01.T01 MTR_2g028130 28.280 343 188 15 19 313 8 340 1.46e-21 95.5
MsG0580028082.01.T01 MTR_7g070440 25.656 343 196 13 14 313 5 331 2.41e-21 94.4
MsG0580028082.01.T01 MTR_1g068835 28.525 305 187 14 19 303 7 300 2.42e-21 94.4
MsG0580028082.01.T01 MTR_4g133170 27.517 298 180 13 19 294 7 290 3.04e-21 94.4
MsG0580028082.01.T01 MTR_5g086780 31.019 216 91 6 124 333 65 228 3.14e-21 91.3
MsG0580028082.01.T01 MTR_5g086780 64.583 48 17 0 14 61 14 61 1.70e-11 63.9
MsG0580028082.01.T01 MTR_1g088120 25.613 367 198 12 15 318 9 363 4.03e-21 94.0
MsG0580028082.01.T01 MTR_1g068875 27.246 334 207 14 19 326 7 330 6.80e-21 93.2
MsG0580028082.01.T01 MTR_8g101580 27.374 358 211 14 24 350 54 393 1.59e-20 92.4
MsG0580028082.01.T01 MTR_1g068860 28.247 308 186 13 19 303 7 302 2.95e-20 91.3
MsG0580028082.01.T01 MTR_2g031720 27.044 318 181 13 18 302 8 307 5.65e-20 90.5
MsG0580028082.01.T01 MTR_2g021050 27.523 327 200 15 24 326 13 326 9.37e-20 89.7
MsG0580028082.01.T01 MTR_3g007360 28.173 323 182 15 24 313 60 365 9.73e-20 90.1
MsG0580028082.01.T01 MTR_3g058470 24.419 344 194 12 24 335 45 354 1.07e-19 89.7
MsG0580028082.01.T01 MTR_2g031640 27.632 304 183 15 24 303 14 304 1.60e-19 89.4
MsG0580028082.01.T01 MTR_2g046920 25.490 357 224 14 2 330 11 353 1.64e-19 89.0
MsG0580028082.01.T01 MTR_2g024110 26.421 299 193 11 24 303 12 302 2.23e-19 88.6
MsG0580028082.01.T01 MTR_1g050305 55.952 84 31 3 259 336 21 104 2.40e-19 84.0
MsG0580028082.01.T01 MTR_3g058480 27.799 259 154 9 24 256 47 298 4.76e-19 87.0
MsG0580028082.01.T01 MTR_4g116330 26.087 322 222 9 4 312 11 329 7.83e-19 87.0
MsG0580028082.01.T01 MTR_2g426060 27.687 307 177 14 24 293 14 312 9.37e-19 87.0
MsG0580028082.01.T01 MTR_3g013770 28.477 302 175 12 19 293 36 323 1.17e-18 86.7
MsG0580028082.01.T01 MTR_3g007410 27.864 323 183 15 24 313 60 365 1.72e-18 86.3
MsG0580028082.01.T01 MTR_5g036250 45.545 101 54 1 256 355 10 110 1.87e-18 82.4
MsG0580028082.01.T01 MTR_2g021150 29.276 304 178 15 15 293 13 304 1.88e-18 85.9
MsG0580028082.01.T01 MTR_2g024100 26.936 297 173 13 30 291 21 308 2.94e-18 85.9
MsG0580028082.01.T01 MTR_2g021155 26.361 349 217 14 19 340 39 374 4.23e-18 86.3
MsG0580028082.01.T01 MTR_0667s0010 24.601 313 197 11 12 293 2 306 5.77e-18 84.7
MsG0580028082.01.T01 MTR_4g021785 25.559 313 208 8 19 317 12 313 6.12e-18 84.3
MsG0580028082.01.T01 MTR_4g037465 25.697 323 197 9 5 294 10 322 6.37e-18 84.7
MsG0580028082.01.T01 MTR_2g046830 26.359 368 224 17 2 338 12 363 6.78e-18 84.7
MsG0580028082.01.T01 MTR_2g046900 25.532 376 231 14 4 343 16 378 7.52e-18 84.3
MsG0580028082.01.T01 MTR_2g425980 28.169 355 198 18 19 326 8 352 7.52e-18 84.7
MsG0580028082.01.T01 MTR_0128s0020 27.297 370 199 18 4 318 2 356 1.31e-17 83.6
MsG0580028082.01.T01 MTR_5g011200 27.273 308 177 16 19 297 20 309 1.71e-17 83.2
MsG0580028082.01.T01 MTR_3g014570 26.211 351 209 14 19 335 32 366 1.76e-17 83.2
MsG0580028082.01.T01 MTR_3g013740 26.032 315 186 11 13 293 41 342 2.01e-17 83.2
MsG0580028082.01.T01 MTR_7g056820 27.597 308 184 12 18 294 9 308 2.20e-17 82.8
MsG0580028082.01.T01 MTR_3g014540 28.525 305 167 13 19 293 32 315 2.34e-17 82.8
MsG0580028082.01.T01 MTR_0115s0020 25.312 320 200 11 24 305 18 336 2.71e-17 82.8
MsG0580028082.01.T01 MTR_0044s0300 28.912 294 175 13 19 293 41 319 2.82e-17 82.8
MsG0580028082.01.T01 MTR_2g031680 26.433 314 197 14 12 304 2 302 2.93e-17 82.8
MsG0580028082.01.T01 MTR_4g023080 24.194 310 209 7 19 314 12 309 3.00e-17 82.4
MsG0580028082.01.T01 MTR_2g426070 24.294 354 215 15 24 332 14 359 3.59e-17 82.4
MsG0580028082.01.T01 MTR_2g047832 25.515 388 207 17 1 330 15 378 3.74e-17 82.4
MsG0580028082.01.T01 MTR_1g094210 25.627 359 221 15 18 350 59 397 4.18e-17 82.4
MsG0580028082.01.T01 MTR_4g023090 23.768 345 233 9 1 324 1 336 4.60e-17 82.0
MsG0580028082.01.T01 MTR_2g022020 41.584 101 57 2 251 350 15 114 4.83e-17 76.6
MsG0580028082.01.T01 MTR_4g024890 27.244 312 185 15 15 294 9 310 5.81e-17 81.6
MsG0580028082.01.T01 MTR_5g046300 25.949 316 205 13 19 317 7 310 6.94e-17 81.3
MsG0580028082.01.T01 MTR_5g046290 25.949 316 205 13 19 317 7 310 6.94e-17 81.3
MsG0580028082.01.T01 MTR_3g034130 27.393 303 183 12 15 289 8 301 7.67e-17 81.3
MsG0580028082.01.T01 MTR_3g034180 25.723 346 219 12 15 330 122 459 8.83e-17 81.6
MsG0580028082.01.T01 MTR_3g009310 26.190 294 188 11 19 294 45 327 1.33e-16 80.9
MsG0580028082.01.T01 MTR_2g055970 26.667 300 180 10 15 290 210 493 1.60e-16 81.3
MsG0580028082.01.T01 MTR_3g083010 25.602 332 190 14 19 303 9 330 2.00e-16 80.5
MsG0580028082.01.T01 MTR_3g030330 27.178 287 184 9 19 293 23 296 2.36e-16 79.7
MsG0580028082.01.T01 MTR_1g094210 27.891 294 174 13 18 293 59 332 3.22e-16 79.7
MsG0580028082.01.T01 MTR_1g097330 24.646 353 229 11 18 345 18 358 3.28e-16 79.7
MsG0580028082.01.T01 MTR_3g047540 53.012 83 33 4 177 257 5 83 3.48e-16 73.6
MsG0580028082.01.T01 MTR_7g028660 27.245 323 175 14 15 294 10 315 4.44e-16 79.0
MsG0580028082.01.T01 MTR_3g034160 27.124 306 180 13 15 289 8 301 4.77e-16 79.0
MsG0580028082.01.T01 MTR_4g023130 25.733 307 167 10 19 314 12 268 5.81e-16 78.2
MsG0580028082.01.T01 MTR_3g007430 24.845 322 200 14 24 320 51 355 7.74e-16 78.6
MsG0580028082.01.T01 MTR_7g060960 26.765 340 173 15 10 324 26 314 9.60e-16 78.2
MsG0580028082.01.T01 MTR_3g024040 24.675 308 209 11 24 319 39 335 1.24e-15 77.8
MsG0580028082.01.T01 MTR_2g025420 24.926 337 201 14 12 303 2 331 1.31e-15 77.8
MsG0580028082.01.T01 MTR_4g023070 24.483 290 190 7 19 289 6 285 1.34e-15 77.8
MsG0580028082.01.T01 MTR_5g096050 39.423 104 50 3 206 296 1 104 1.67e-15 72.4
MsG0580028082.01.T01 MTR_4g061340 24.085 328 185 14 24 313 34 335 1.83e-15 77.4
MsG0580028082.01.T01 MTR_4g094365 25.705 319 218 7 9 312 1 315 2.14e-15 77.0
MsG0580028082.01.T01 MTR_8g467140 27.063 303 175 12 15 290 31 314 2.50e-15 76.3
MsG0580028082.01.T01 MTR_7g056710 28.065 310 161 16 24 294 26 312 4.44e-15 76.3
MsG0580028082.01.T01 MTR_7g066000 25.568 352 199 14 3 304 5 343 4.51e-15 76.3
MsG0580028082.01.T01 MTR_1g442850 27.586 319 178 15 14 294 3 306 5.25e-15 75.9
MsG0580028082.01.T01 MTR_2g031700 26.749 243 142 8 12 233 2 229 6.26e-15 74.7
MsG0580028082.01.T01 MTR_4g107820 25.648 347 212 13 7 324 27 356 7.48e-15 75.5
MsG0580028082.01.T01 MTR_4g107780 25.648 347 212 13 7 324 27 356 7.48e-15 75.5
MsG0580028082.01.T01 MTR_1g055135 24.922 321 211 10 15 312 12 325 7.88e-15 75.5
MsG0580028082.01.T01 MTR_2g426020 24.848 330 205 13 19 313 9 330 8.10e-15 75.5
MsG0580028082.01.T01 MTR_4g107820 25.648 347 212 13 7 324 27 356 9.26e-15 75.5
MsG0580028082.01.T01 MTR_7g061060 26.562 320 179 13 15 294 12 315 9.52e-15 75.1
MsG0580028082.01.T01 MTR_4g107780 25.648 347 212 13 7 324 27 356 9.60e-15 75.5
MsG0580028082.01.T01 MTR_6g092560 27.692 325 170 13 16 293 12 318 1.08e-14 75.5
MsG0580028082.01.T01 MTR_8g041440 53.846 65 26 1 13 73 12 76 1.53e-14 69.7
MsG0580028082.01.T01 MTR_1g068905 28.000 250 150 10 19 257 7 237 2.59e-14 73.2
MsG0580028082.01.T01 MTR_4g055060 26.073 303 174 14 24 294 38 322 2.59e-14 73.9
MsG0580028082.01.T01 MTR_4g116340 26.778 239 139 9 7 227 27 247 3.42e-14 72.0
MsG0580028082.01.T01 MTR_0128s0070 26.923 312 175 14 18 291 24 320 5.38e-14 72.8
MsG0580028082.01.T01 MTR_2g028110 25.294 340 211 16 24 332 12 339 6.36e-14 72.8
MsG0580028082.01.T01 MTR_2g078900 25.839 298 178 13 19 293 36 313 7.12e-14 72.4
MsG0580028082.01.T01 MTR_1g050542 27.778 342 198 15 18 330 60 381 8.70e-14 72.4
MsG0580028082.01.T01 MTR_1g023400 25.392 319 201 13 19 313 6 311 9.92e-14 72.0
MsG0580028082.01.T01 MTR_2g028160 25.706 354 197 19 19 319 8 348 1.03e-13 72.4
MsG0580028082.01.T01 MTR_7g050480 27.187 320 180 17 9 293 15 316 1.05e-13 72.0
MsG0580028082.01.T01 MTR_7g061050 26.045 311 189 11 15 294 12 312 1.16e-13 72.0
MsG0580028082.01.T01 MTR_7g077070 23.896 385 212 15 1 314 1 375 1.26e-13 72.0
MsG0580028082.01.T01 MTR_5g096710 26.518 313 182 16 18 294 25 325 1.43e-13 71.6
MsG0580028082.01.T01 MTR_7g062100 26.316 342 204 14 18 318 26 360 1.72e-13 71.6
MsG0580028082.01.T01 MTR_2g025960 28.111 217 121 10 108 293 3 215 1.76e-13 70.9
MsG0580028082.01.T01 MTR_2g021190 26.756 299 181 13 19 293 24 308 2.49e-13 70.9
MsG0580028082.01.T01 MTR_5g057710 26.102 295 175 13 24 293 54 330 2.57e-13 70.9
MsG0580028082.01.T01 MTR_5g022420 25.000 312 190 11 15 306 26 313 2.74e-13 70.9
MsG0580028082.01.T01 MTR_2g028140 26.074 326 178 16 19 293 8 321 2.98e-13 70.9
MsG0580028082.01.T01 MTR_1g055070 27.823 248 146 11 19 235 52 297 3.12e-13 70.5
MsG0580028082.01.T01 MTR_7g022600 25.073 343 196 12 5 291 7 344 3.37e-13 70.9
MsG0580028082.01.T01 MTR_7g055987 27.070 314 178 17 13 294 17 311 3.53e-13 70.5
MsG0580028082.01.T01 MTR_4g019990 25.680 331 183 15 12 294 2 317 3.70e-13 70.5
MsG0580028082.01.T01 MTR_3g464500 25.664 339 182 14 3 294 14 329 3.77e-13 70.5
MsG0580028082.01.T01 MTR_4g094400 38.739 111 40 4 203 291 7 111 5.14e-13 65.9
MsG0580028082.01.T01 MTR_2g021860 46.067 89 39 3 89 169 16 103 5.40e-13 66.2
MsG0580028082.01.T01 MTR_1g071010 25.240 313 188 13 18 294 17 319 6.13e-13 69.7
MsG0580028082.01.T01 MTR_4g108820 26.471 306 168 13 15 306 41 303 6.34e-13 69.3
MsG0580028082.01.T01 MTR_5g070080 23.779 307 190 8 19 289 13 311 6.73e-13 69.7
MsG0580028082.01.T01 MTR_1g054575 27.492 331 182 17 1 306 41 338 7.13e-13 70.1
MsG0580028082.01.T01 MTR_3g009260 25.338 296 181 12 19 294 44 319 7.68e-13 69.3
MsG0580028082.01.T01 MTR_3g036430 23.404 282 178 11 19 293 23 273 7.71e-13 69.3
MsG0580028082.01.T01 MTR_6g053240 25.667 300 178 13 24 293 36 320 8.33e-13 69.3
MsG0580028082.01.T01 MTR_7g066060 26.434 401 215 22 14 350 21 405 8.71e-13 69.7
MsG0580028082.01.T01 MTR_6g021880 24.207 347 223 14 27 341 31 369 9.45e-13 68.9
MsG0580028082.01.T01 MTR_7g056200 25.994 327 189 13 5 302 14 316 1.08e-12 68.9
MsG0580028082.01.T01 MTR_4g109280 26.970 330 210 10 19 330 11 327 1.18e-12 68.6
MsG0580028082.01.T01 MTR_4g117850 24.324 370 218 14 19 350 26 371 1.21e-12 68.9
MsG0580028082.01.T01 MTR_3g006530 25.000 300 186 13 19 293 43 328 1.25e-12 68.9
MsG0580028082.01.T01 MTR_4g116330 28.000 225 151 7 4 218 11 234 1.30e-12 68.6
MsG0580028082.01.T01 MTR_7g052150 26.959 319 167 16 18 293 24 319 1.35e-12 68.9
MsG0580028082.01.T01 MTR_4g080200 26.606 218 124 8 18 213 5 208 1.46e-12 68.2
MsG0580028082.01.T01 MTR_1g056710 26.174 298 181 14 19 293 37 318 1.51e-12 68.6
MsG0580028082.01.T01 MTR_7g060940 27.647 340 166 19 18 306 24 334 1.63e-12 68.6
MsG0580028082.01.T01 MTR_3g011100 26.814 317 184 14 19 306 238 535 1.64e-12 68.9
MsG0580028082.01.T01 MTR_4g013185 25.444 338 186 11 15 294 9 338 1.78e-12 68.6
MsG0580028082.01.T01 MTR_7g056570 27.019 322 168 18 15 294 17 313 1.85e-12 68.6
MsG0580028082.01.T01 MTR_4g030090 24.011 379 217 17 18 336 16 383 1.91e-12 68.2
MsG0580028082.01.T01 MTR_2g078870 26.087 253 149 12 85 322 41 270 1.95e-12 67.8
MsG0580028082.01.T01 MTR_1g115160 26.087 322 207 14 19 327 25 328 2.27e-12 67.8
MsG0580028082.01.T01 MTR_4g023150 24.834 302 207 7 29 317 23 317 3.47e-12 67.4
MsG0580028082.01.T01 MTR_6g048140 26.936 297 174 15 24 293 47 327 3.72e-12 67.4
MsG0580028082.01.T01 MTR_3g010590 27.835 291 172 12 19 293 42 310 3.74e-12 67.4
MsG0580028082.01.T01 MTR_4g117770 25.957 235 151 8 16 235 11 237 4.55e-12 67.0
MsG0580028082.01.T01 MTR_4g117810 25.957 235 151 8 16 235 11 237 4.55e-12 67.0
MsG0580028082.01.T01 MTR_7g050520 26.006 323 168 17 15 293 21 316 4.74e-12 67.0
MsG0580028082.01.T01 MTR_4g023380 24.554 224 138 7 30 240 30 235 5.85e-12 66.6
MsG0580028082.01.T01 MTR_4g070550 24.762 315 190 12 19 293 8 315 7.04e-12 66.6
MsG0580028082.01.T01 MTR_3g010920 27.719 285 165 14 24 293 52 310 8.84e-12 66.2
MsG0580028082.01.T01 MTR_4g023200 24.917 301 206 6 30 317 24 317 9.08e-12 65.9
MsG0580028082.01.T01 MTR_6g016285 25.217 345 182 15 15 303 20 344 1.08e-11 66.2
MsG0580028082.01.T01 MTR_7g077970 26.786 336 172 17 16 293 7 326 1.15e-11 65.9
MsG0580028082.01.T01 MTR_5g068040 25.228 329 186 15 1 294 1 304 1.16e-11 65.9
MsG0580028082.01.T01 MTR_8g073550 28.365 208 127 8 15 206 29 230 1.21e-11 64.3
MsG0580028082.01.T01 MTR_7g056717 28.529 333 180 17 1 294 4 317 1.26e-11 65.9
MsG0580028082.01.T01 MTR_7g057270 25.309 324 183 13 18 294 28 339 1.44e-11 65.9
MsG0580028082.01.T01 MTR_6g007135 26.797 306 175 15 19 291 29 318 1.57e-11 65.5
MsG0580028082.01.T01 MTR_1g022200 25.000 336 205 13 19 323 18 337 1.67e-11 65.5
MsG0580028082.01.T01 MTR_3g036290 24.150 294 181 12 19 294 25 294 1.84e-11 65.1
MsG0580028082.01.T01 MTR_7g023950 25.185 270 153 13 108 351 12 258 1.92e-11 64.3
MsG0580028082.01.T01 MTR_4g023440 25.664 226 147 7 7 218 9 227 2.00e-11 64.7
MsG0580028082.01.T01 MTR_6g048120 24.837 306 185 12 19 293 39 330 2.56e-11 64.7
MsG0580028082.01.T01 MTR_7g066030 25.143 350 188 15 2 294 3 335 2.70e-11 64.7
MsG0580028082.01.T01 MTR_3g024110 25.172 290 186 11 19 293 104 377 3.25e-11 64.7
MsG0580028082.01.T01 MTR_0128s0010 23.120 359 220 14 3 313 5 355 3.46e-11 64.3
MsG0580028082.01.T01 MTR_5g046280 25.000 216 144 7 113 317 5 213 3.46e-11 63.2
MsG0580028082.01.T01 MTR_3g009240 24.324 296 187 12 19 294 39 317 4.30e-11 63.9
MsG0580028082.01.T01 MTR_0242s0060 26.061 330 180 17 15 293 8 324 4.34e-11 64.3
MsG0580028082.01.T01 MTR_0242s0040 26.061 330 180 17 15 293 8 324 4.34e-11 64.3
MsG0580028082.01.T01 MTR_3g010970 24.573 293 176 11 24 296 56 323 4.52e-11 63.9
MsG0580028082.01.T01 MTR_5g069760 24.437 311 190 10 15 294 5 301 4.73e-11 63.9
MsG0580028082.01.T01 MTR_7g066850 25.316 316 180 15 18 294 25 323 4.97e-11 64.3
MsG0580028082.01.T01 MTR_4g006270 25.329 304 189 15 19 307 7 287 5.35e-11 63.9
MsG0580028082.01.T01 MTR_6g087660 58.333 48 20 0 12 59 14 61 6.40e-11 61.6
MsG0580028082.01.T01 MTR_2g043410 24.471 331 173 15 18 294 24 331 7.79e-11 63.5
MsG0580028082.01.T01 MTR_7g056760 22.563 359 229 11 3 313 5 362 8.64e-11 63.2
MsG0580028082.01.T01 MTR_4g023190 24.497 298 212 5 29 317 23 316 8.68e-11 63.2
MsG0580028082.01.T01 MTR_3g083640 27.336 289 174 14 24 293 63 334 8.93e-11 63.2
MsG0580028082.01.T01 MTR_7g055977 27.950 322 169 16 15 294 6 306 9.20e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028082.01.T01 AT1G47390 28.692 237 145 10 24 248 15 239 2.39e-15 77.0
MsG0580028082.01.T01 AT3G16210 24.315 292 198 11 13 299 2 275 1.43e-14 74.3
MsG0580028082.01.T01 AT3G17500 24.281 313 219 8 19 322 8 311 1.77e-14 74.3
MsG0580028082.01.T01 AT3G17500 24.281 313 219 8 19 322 7 310 2.84e-14 73.9
MsG0580028082.01.T01 AT3G21410 26.298 289 178 12 24 293 46 318 4.09e-14 73.6
MsG0580028082.01.T01 AT3G22350 26.389 288 177 11 19 286 7 279 2.31e-13 70.9
MsG0580028082.01.T01 AT2G23160 25.506 247 155 8 11 232 2 244 3.07e-12 67.0
MsG0580028082.01.T01 AT3G22650 23.973 292 185 11 19 293 12 283 3.14e-12 67.4
MsG0580028082.01.T01 AT3G17620 25.000 312 197 11 25 309 14 315 3.54e-12 67.4
MsG0580028082.01.T01 AT3G22650 24.068 295 192 11 19 293 12 294 1.01e-11 66.2
MsG0580028082.01.T01 AT4G33290 24.116 311 208 14 19 304 8 315 4.59e-11 64.3
MsG0580028082.01.T01 AT1G47730 24.221 289 178 13 19 285 28 297 5.87e-11 63.9
MsG0580028082.01.T01 AT3G17480 22.314 242 160 6 18 245 14 241 7.01e-11 63.5

Find 67 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCTTTCTACTTTCTTTC+TGG 0.073703 5:+74304687 MsG0580028082.01.T01:CDS
ATAATCCTTGCCTTCTAAAA+AGG 0.163146 5:-74305180 None:intergenic
GCAAGACTGTAGTTGTATTT+TGG 0.175639 5:+74304820 MsG0580028082.01.T01:CDS
TTATCATCATTTACACAAAT+TGG 0.233862 5:-74305047 None:intergenic
AGACTATATATCTCCCAAAA+AGG 0.246484 5:-74304987 None:intergenic
GTTAACCTGCAAGTGTTAAA+TGG 0.254706 5:+74305215 MsG0580028082.01.T01:CDS
ATATCAATCCTGGGTGAAAT+TGG 0.264291 5:+74305284 MsG0580028082.01.T01:CDS
AAATGATTCCTGGAGGAAAA+TGG 0.298690 5:+74305013 MsG0580028082.01.T01:CDS
GATTTGGCTATGACCATGTT+AGG 0.313092 5:+74304916 MsG0580028082.01.T01:CDS
CCGACCCATTTAACACTTGC+AGG 0.314615 5:-74305220 None:intergenic
TGGGTTAGACTCTTTGATAT+TGG 0.328611 5:+74305320 MsG0580028082.01.T01:CDS
CGAATTATAGATTCTGATAA+TGG 0.355000 5:+74304780 MsG0580028082.01.T01:CDS
ATGATAGAGTGGATGAGAAT+TGG 0.364513 5:-74304634 None:intergenic
GGAGTTAAGGATCATGGATT+TGG 0.371355 5:+74304900 MsG0580028082.01.T01:CDS
GATGATAATGTGTGCTTGAA+TGG 0.381312 5:+74305062 MsG0580028082.01.T01:CDS
CCTCCACAACATTCACATAT+TGG 0.385788 5:-74304956 None:intergenic
TCCTGTGGAGTTAAGGATCA+TGG 0.394778 5:+74304894 MsG0580028082.01.T01:CDS
AGAATCTATAATTCGACTAA+TGG 0.395198 5:-74304772 None:intergenic
TCCTGCTACTGAGGAAGTTA+AGG 0.402235 5:+74304845 MsG0580028082.01.T01:CDS
AAATACAACTACAGTCTTGC+CGG 0.416642 5:-74304817 None:intergenic
TTATGCGTCCTATCATAGTA+TGG 0.429473 5:+74305357 MsG0580028082.01.T01:CDS
GAAAGAAAGTAGAAAGAGTT+CGG 0.436825 5:-74304684 None:intergenic
TCTCTTGTGTTCGTAAATCA+TGG 0.437081 5:+74304568 MsG0580028082.01.T01:CDS
CCCTTCTTCCATACTATGAT+AGG 0.439376 5:-74305365 None:intergenic
GGTTCTTGTGTCATTTCACT+TGG 0.441633 5:+74305127 MsG0580028082.01.T01:CDS
AAATTGGCGTCGAGGAATCA+TGG 0.448593 5:+74305300 MsG0580028082.01.T01:CDS
GACAAATGACTCCAACGAAC+GGG 0.462911 5:+74304457 None:intergenic
ACCTTAACTTCCTCAGTAGC+AGG 0.463097 5:-74304846 None:intergenic
TAATTGTCAATAACTACAAA+TGG 0.464606 5:-74305512 None:intergenic
GAATGGGATATGTCATTGGT+TGG 0.472417 5:+74305079 MsG0580028082.01.T01:CDS
GCTTGAATGGGATATGTCAT+TGG 0.488022 5:+74305075 MsG0580028082.01.T01:CDS
GTAAGCTGTGGATCGAGAAA+TGG 0.489653 5:-74304750 None:intergenic
TTAACCTGCAAGTGTTAAAT+GGG 0.494388 5:+74305216 MsG0580028082.01.T01:CDS
AATGGCATTCTTTGTATCAC+CGG 0.498939 5:+74304798 MsG0580028082.01.T01:CDS
CTAACCTTCTTCCCGTTCGT+TGG 0.504565 5:-74304468 None:intergenic
AGAAAATGATGACTATGATA+TGG 0.516653 5:+74305106 MsG0580028082.01.T01:CDS
TCCTATCATAGTATGGAAGA+AGG 0.517772 5:+74305364 MsG0580028082.01.T01:CDS
CAATAACTACAAATGGAAGA+AGG 0.522543 5:-74305505 None:intergenic
TCTAACTACCGGGGTGATTG+AGG 0.523427 5:+74305430 MsG0580028082.01.T01:CDS
ACCGGGGTGATTGAGGAGAT+TGG 0.531596 5:+74305437 MsG0580028082.01.T01:CDS
GACTCCAACGAACGGGAAGA+AGG 0.535106 5:+74304464 MsG0580028082.01.T01:CDS
AGAAAAGAATCATGATAGAG+TGG 0.535467 5:-74304645 None:intergenic
ATGATAATGTGTGCTTGAAT+GGG 0.547598 5:+74305063 MsG0580028082.01.T01:CDS
AATGGGATATGTCATTGGTT+GGG 0.549037 5:+74305080 MsG0580028082.01.T01:CDS
TCCATGATCCTTAACTCCAC+AGG 0.549266 5:-74304895 None:intergenic
GTTCTTGTGTCATTTCACTT+GGG 0.552412 5:+74305128 MsG0580028082.01.T01:CDS
CAGGAAAACTCAAGTTGAGA+AGG 0.562654 5:-74304876 None:intergenic
GTCATTTCACTTGGGCAATG+AGG 0.577377 5:+74305136 MsG0580028082.01.T01:CDS
CCTGCAAGTGTTAAATGGGT+CGG 0.577513 5:+74305220 MsG0580028082.01.T01:CDS
TGACAAATGACTCCAACGAA+CGG 0.578968 5:+74304456 None:intergenic
AATTGGCGTCGAGGAATCAT+GGG 0.582935 5:+74305301 MsG0580028082.01.T01:CDS
CCTCGACGCCAATTTCACCC+AGG 0.602185 5:-74305292 None:intergenic
ATTTGGCTATGACCATGTTA+GGG 0.604720 5:+74304917 MsG0580028082.01.T01:CDS
GAAAACTCAAGTTGAGAAGG+AGG 0.605994 5:-74304873 None:intergenic
GCTTATAGTCATCCCTAACA+TGG 0.607912 5:-74304929 None:intergenic
AAGCGCTTAATAGATTTGAG+AGG 0.611953 5:-74304546 None:intergenic
CCTATCATAGTATGGAAGAA+GGG 0.613697 5:+74305365 MsG0580028082.01.T01:CDS
AACGGGAAGAAGGTTAGTAA+TGG 0.624120 5:+74304474 MsG0580028082.01.T01:CDS
CCTGGGTGAAATTGGCGTCG+AGG 0.631758 5:+74305292 MsG0580028082.01.T01:CDS
CCAATATGTGAATGTTGTGG+AGG 0.642550 5:+74304956 MsG0580028082.01.T01:CDS
ATTCGACTAATGGTAAGCTG+TGG 0.643263 5:-74304762 None:intergenic
CATCCAATATGTGAATGTTG+TGG 0.644057 5:+74304953 MsG0580028082.01.T01:CDS
AGCTGTGGATCGAGAAATGG+AGG 0.644908 5:-74304747 None:intergenic
ACCAATCTCCTCAATCACCC+CGG 0.678951 5:-74305438 None:intergenic
TGTGGATCGAGAAATGGAGG+TGG 0.680125 5:-74304744 None:intergenic
GGACGCATAATGCAAGACAA+AGG 0.685762 5:-74305344 None:intergenic
CAATATGTGAATGTTGTGGA+GGG 0.687525 5:+74304957 MsG0580028082.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGTCAATAACTACAAA+TGG - Chr5:74305515-74305534 None:intergenic 20.0%
!! TTATCATCATTTACACAAAT+TGG - Chr5:74305050-74305069 None:intergenic 20.0%
!!! ATGAACATTTTGATGAAATT+AGG - Chr5:74304612-74304631 None:intergenic 20.0%
!!! TGAACATTTTGATGAAATTA+GGG - Chr5:74304611-74304630 None:intergenic 20.0%
! AGAAAATGATGACTATGATA+TGG + Chr5:74305106-74305125 MsG0580028082.01.T01:CDS 25.0%
! AGAATCTATAATTCGACTAA+TGG - Chr5:74304775-74304794 None:intergenic 25.0%
! ATAGTCTAAAAAATGATTCC+TGG + Chr5:74305003-74305022 MsG0580028082.01.T01:CDS 25.0%
! CGAATTATAGATTCTGATAA+TGG + Chr5:74304780-74304799 MsG0580028082.01.T01:CDS 25.0%
AACTCTTTCTACTTTCTTTC+TGG + Chr5:74304687-74304706 MsG0580028082.01.T01:CDS 30.0%
AGAAAAGAATCATGATAGAG+TGG - Chr5:74304648-74304667 None:intergenic 30.0%
AGACTATATATCTCCCAAAA+AGG - Chr5:74304990-74305009 None:intergenic 30.0%
CAATAACTACAAATGGAAGA+AGG - Chr5:74305508-74305527 None:intergenic 30.0%
GAAAGAAAGTAGAAAGAGTT+CGG - Chr5:74304687-74304706 None:intergenic 30.0%
GACTATATATCTCCCAAAAA+GGG - Chr5:74304989-74305008 None:intergenic 30.0%
TTAACCTGCAAGTGTTAAAT+GGG + Chr5:74305216-74305235 MsG0580028082.01.T01:CDS 30.0%
! ATAATCCTTGCCTTCTAAAA+AGG - Chr5:74305183-74305202 None:intergenic 30.0%
! ATGATAATGTGTGCTTGAAT+GGG + Chr5:74305063-74305082 MsG0580028082.01.T01:CDS 30.0%
! TAATCCTTGCCTTCTAAAAA+GGG - Chr5:74305182-74305201 None:intergenic 30.0%
! TCTTTTCACATATCAATCCT+GGG + Chr5:74305275-74305294 MsG0580028082.01.T01:CDS 30.0%
AAATACAACTACAGTCTTGC+CGG - Chr5:74304820-74304839 None:intergenic 35.0%
AAATGATTCCTGGAGGAAAA+TGG + Chr5:74305013-74305032 MsG0580028082.01.T01:CDS 35.0%
AAGCGCTTAATAGATTTGAG+AGG - Chr5:74304549-74304568 None:intergenic 35.0%
AATGGCATTCTTTGTATCAC+CGG + Chr5:74304798-74304817 MsG0580028082.01.T01:CDS 35.0%
ATATCAATCCTGGGTGAAAT+TGG + Chr5:74305284-74305303 MsG0580028082.01.T01:CDS 35.0%
ATGATAGAGTGGATGAGAAT+TGG - Chr5:74304637-74304656 None:intergenic 35.0%
ATTTGGCTATGACCATGTTA+GGG + Chr5:74304917-74304936 MsG0580028082.01.T01:CDS 35.0%
CAATATGTGAATGTTGTGGA+GGG + Chr5:74304957-74304976 MsG0580028082.01.T01:CDS 35.0%
CATCCAATATGTGAATGTTG+TGG + Chr5:74304953-74304972 MsG0580028082.01.T01:CDS 35.0%
CCTATCATAGTATGGAAGAA+GGG + Chr5:74305365-74305384 MsG0580028082.01.T01:CDS 35.0%
GTCTAAAAAATGATTCCTGG+AGG + Chr5:74305006-74305025 MsG0580028082.01.T01:CDS 35.0%
GTTAACCTGCAAGTGTTAAA+TGG + Chr5:74305215-74305234 MsG0580028082.01.T01:CDS 35.0%
TCCTATCATAGTATGGAAGA+AGG + Chr5:74305364-74305383 MsG0580028082.01.T01:CDS 35.0%
TCTCTTGTGTTCGTAAATCA+TGG + Chr5:74304568-74304587 MsG0580028082.01.T01:CDS 35.0%
TTATGCGTCCTATCATAGTA+TGG + Chr5:74305357-74305376 MsG0580028082.01.T01:CDS 35.0%
! AATGGGATATGTCATTGGTT+GGG + Chr5:74305080-74305099 MsG0580028082.01.T01:CDS 35.0%
! ACACCTTTACCCTTTTTAGA+AGG + Chr5:74305170-74305189 MsG0580028082.01.T01:CDS 35.0%
! ATCAATATCCATTTTCCTCC+AGG - Chr5:74305024-74305043 None:intergenic 35.0%
! GATGATAATGTGTGCTTGAA+TGG + Chr5:74305062-74305081 MsG0580028082.01.T01:CDS 35.0%
! GCAAGACTGTAGTTGTATTT+TGG + Chr5:74304820-74304839 MsG0580028082.01.T01:CDS 35.0%
! GTCTTTTCACATATCAATCC+TGG + Chr5:74305274-74305293 MsG0580028082.01.T01:CDS 35.0%
! TGGGTTAGACTCTTTGATAT+TGG + Chr5:74305320-74305339 MsG0580028082.01.T01:CDS 35.0%
! TTGCCTTCTAAAAAGGGTAA+AGG - Chr5:74305176-74305195 None:intergenic 35.0%
!! GTTCTTGTGTCATTTCACTT+GGG + Chr5:74305128-74305147 MsG0580028082.01.T01:CDS 35.0%
!! TTTACCCTTTTTAGAAGGCA+AGG + Chr5:74305175-74305194 MsG0580028082.01.T01:CDS 35.0%
!!! CTTGTTTTGATCTAACTACC+GGG + Chr5:74305420-74305439 MsG0580028082.01.T01:CDS 35.0%
!!! GCTTGTTTTGATCTAACTAC+CGG + Chr5:74305419-74305438 MsG0580028082.01.T01:CDS 35.0%
!!! TTGTTTTGATCTAACTACCG+GGG + Chr5:74305421-74305440 MsG0580028082.01.T01:CDS 35.0%
AACGGGAAGAAGGTTAGTAA+TGG + Chr5:74304474-74304493 MsG0580028082.01.T01:CDS 40.0%
ATTCGACTAATGGTAAGCTG+TGG - Chr5:74304765-74304784 None:intergenic 40.0%
CCAATATGTGAATGTTGTGG+AGG + Chr5:74304956-74304975 MsG0580028082.01.T01:CDS 40.0%
CCCTTCTTCCATACTATGAT+AGG - Chr5:74305368-74305387 None:intergenic 40.0%
CCTCCACAACATTCACATAT+TGG - Chr5:74304959-74304978 None:intergenic 40.0%
GAATGGGATATGTCATTGGT+TGG + Chr5:74305079-74305098 MsG0580028082.01.T01:CDS 40.0%
GATTTGGCTATGACCATGTT+AGG + Chr5:74304916-74304935 MsG0580028082.01.T01:CDS 40.0%
GCTTATAGTCATCCCTAACA+TGG - Chr5:74304932-74304951 None:intergenic 40.0%
GCTTGAATGGGATATGTCAT+TGG + Chr5:74305075-74305094 MsG0580028082.01.T01:CDS 40.0%
GGAGTTAAGGATCATGGATT+TGG + Chr5:74304900-74304919 MsG0580028082.01.T01:CDS 40.0%
! TCTCAACTTGAGTTTTCCTG+TGG + Chr5:74304879-74304898 MsG0580028082.01.T01:CDS 40.0%
! TGAGTTTTCCTGTGGAGTTA+AGG + Chr5:74304887-74304906 MsG0580028082.01.T01:CDS 40.0%
!! CAGGAAAACTCAAGTTGAGA+AGG - Chr5:74304879-74304898 None:intergenic 40.0%
!! GAAAACTCAAGTTGAGAAGG+AGG - Chr5:74304876-74304895 None:intergenic 40.0%
!! GGTTCTTGTGTCATTTCACT+TGG + Chr5:74305127-74305146 MsG0580028082.01.T01:CDS 40.0%
!!! ATTTTGGAATCCTGCTACTG+AGG + Chr5:74304836-74304855 MsG0580028082.01.T01:CDS 40.0%
ACCTTAACTTCCTCAGTAGC+AGG - Chr5:74304849-74304868 None:intergenic 45.0%
CCTGCAAGTGTTAAATGGGT+CGG + Chr5:74305220-74305239 MsG0580028082.01.T01:CDS 45.0%
GGACGCATAATGCAAGACAA+AGG - Chr5:74305347-74305366 None:intergenic 45.0%
GTAAGCTGTGGATCGAGAAA+TGG - Chr5:74304753-74304772 None:intergenic 45.0%
GTCATTTCACTTGGGCAATG+AGG + Chr5:74305136-74305155 MsG0580028082.01.T01:CDS 45.0%
TCCATGATCCTTAACTCCAC+AGG - Chr5:74304898-74304917 None:intergenic 45.0%
TCCTGCTACTGAGGAAGTTA+AGG + Chr5:74304845-74304864 MsG0580028082.01.T01:CDS 45.0%
TCCTGTGGAGTTAAGGATCA+TGG + Chr5:74304894-74304913 MsG0580028082.01.T01:CDS 45.0%
! AAATTGGCGTCGAGGAATCA+TGG + Chr5:74305300-74305319 MsG0580028082.01.T01:CDS 45.0%
! AATTGGCGTCGAGGAATCAT+GGG + Chr5:74305301-74305320 MsG0580028082.01.T01:CDS 45.0%
ACCAATCTCCTCAATCACCC+CGG - Chr5:74305441-74305460 None:intergenic 50.0%
AGCTGTGGATCGAGAAATGG+AGG - Chr5:74304750-74304769 None:intergenic 50.0%
CCGACCCATTTAACACTTGC+AGG - Chr5:74305223-74305242 None:intergenic 50.0%
CTAACCTTCTTCCCGTTCGT+TGG - Chr5:74304471-74304490 None:intergenic 50.0%
TCTAACTACCGGGGTGATTG+AGG + Chr5:74305430-74305449 MsG0580028082.01.T01:CDS 50.0%
TGTGGATCGAGAAATGGAGG+TGG - Chr5:74304747-74304766 None:intergenic 50.0%
! GGAGGGTCATGACCCTTTTT+GGG + Chr5:74304974-74304993 MsG0580028082.01.T01:CDS 50.0%
! TGGAGGGTCATGACCCTTTT+TGG + Chr5:74304973-74304992 MsG0580028082.01.T01:CDS 50.0%
ACCGGGGTGATTGAGGAGAT+TGG + Chr5:74305437-74305456 MsG0580028082.01.T01:CDS 55.0%
GACTCCAACGAACGGGAAGA+AGG + Chr5:74304464-74304483 MsG0580028082.01.T01:CDS 55.0%
CCTCGACGCCAATTTCACCC+AGG - Chr5:74305295-74305314 None:intergenic 60.0%
CCTGGGTGAAATTGGCGTCG+AGG + Chr5:74305292-74305311 MsG0580028082.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 74304462 74305535 74304462 ID=MsG0580028082.01;Name=MsG0580028082.01
Chr5 mRNA 74304462 74305535 74304462 ID=MsG0580028082.01.T01;Parent=MsG0580028082.01;Name=MsG0580028082.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|357
Chr5 exon 74304462 74305535 74304462 ID=MsG0580028082.01.T01:exon:45630;Parent=MsG0580028082.01.T01
Chr5 CDS 74304462 74305535 74304462 ID=MsG0580028082.01.T01:cds;Parent=MsG0580028082.01.T01
Gene Sequence

>MsG0580028082.01.T01

ATGACTCCAACGAACGGGAAGAAGGTTAGTAATGGTAGTAACTTTGTTCACGATGACATTGCTTTGTGTATTCTTTCTAAACTTCCTCTCAAATCTATTAAGCGCTTCTCTTGTGTTCGTAAATCATGGTCTCTTTTATTTGAAAACCCTAATTTCATCAAAATGTTCATTTCCAATTCTCATCCACTCTATCATGATTCTTTTCTCATTTTAAATCAGTATCCGAACTCTTTCTACTTTCTTTCTGGTCACAAGTTTCAGAATAAACTCAAATTGAAATTTCCACCTCCATTTCTCGATCCACAGCTTACCATTAGTCGAATTATAGATTCTGATAATGGCATTCTTTGTATCACCGGCAAGACTGTAGTTGTATTTTGGAATCCTGCTACTGAGGAAGTTAAGGTCATTCCTCCTTCTCAACTTGAGTTTTCCTGTGGAGTTAAGGATCATGGATTTGGCTATGACCATGTTAGGGATGACTATAAGCTCATCCAATATGTGAATGTTGTGGAGGGTCATGACCCTTTTTGGGAGATATATAGTCTAAAAAATGATTCCTGGAGGAAAATGGATATTGATATGCCAATTTGTGTAAATGATGATAATGTGTGCTTGAATGGGATATGTCATTGGTTGGGTGAAGAAAATGATGACTATGATATGGTTCTTGTGTCATTTCACTTGGGCAATGAGGTGTGTTTTGTTACACCTTTACCCTTTTTAGAAGGCAAGGATTATGATTTTGATGATGTTAACCTGCAAGTGTTAAATGGGTCGGTTGCTGTGATATTTAATCATATAGAGACAAAGTCTTTTCACATATCAATCCTGGGTGAAATTGGCGTCGAGGAATCATGGGTTAGACTCTTTGATATTGGACCTTTGTCTTGCATTATGCGTCCTATCATAGTATGGAAGAAGGGCAGTATAATTGTTAGAAAATTTGATCAACTAGCTTGTTTTGATCTAACTACCGGGGTGATTGAGGAGATTGGTGTTCAAGCAGAACATTTTTGCGACATTTTCATTTACAAGAAAAACCTTCTTCCATTTGTAGTTATTGACAATTAA
Protein sequence

>MsG0580028082.01.T01

MTPTNGKKVSNGSNFVHDDIALCILSKLPLKSIKRFSCVRKSWSLLFENPNFIKMFISNSHPLYHDSFLILNQYPNSFYFLSGHKFQNKLKLKFPPPFLDPQLTISRIIDSDNGILCITGKTVVVFWNPATEEVKVIPPSQLEFSCGVKDHGFGYDHVRDDYKLIQYVNVVEGHDPFWEIYSLKNDSWRKMDIDMPICVNDDNVCLNGICHWLGEENDDYDMVLVSFHLGNEVCFVTPLPFLEGKDYDFDDVNLQVLNGSVAVIFNHIETKSFHISILGEIGVEESWVRLFDIGPLSCIMRPIIVWKKGSIIVRKFDQLACFDLTTGVIEEIGVQAEHFCDIFIYKKNLLPFVVIDN*