Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001900.01.T01 | XP_039686174.1 | 74.528 | 212 | 53 | 1 | 100 | 310 | 174 | 385 | 1.18E-104 | 321 |
MsG0180001900.01.T01 | XP_039686174.1 | 86.957 | 69 | 9 | 0 | 1 | 69 | 1 | 69 | 1.88E-30 | 129 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001900.01.T01 | A0A396JND8 | 74.528 | 212 | 53 | 1 | 100 | 310 | 174 | 385 | 5.63e-105 | 321 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001900.01.T01 | MTR_8g064890 | 60.094 | 213 | 83 | 1 | 100 | 310 | 177 | 389 | 1.59e-82 | 254 |
MsG0180001900.01.T01 | MTR_8g064890 | 66.667 | 78 | 18 | 1 | 6 | 83 | 5 | 74 | 1.00e-18 | 86.3 |
MsG0180001900.01.T01 | MTR_8g036970 | 40.000 | 325 | 133 | 8 | 21 | 296 | 2 | 313 | 6.15e-61 | 198 |
MsG0180001900.01.T01 | MTR_8g063440 | 33.763 | 388 | 154 | 9 | 14 | 310 | 9 | 384 | 1.69e-56 | 187 |
MsG0180001900.01.T01 | MTR_1g098180 | 36.508 | 378 | 161 | 12 | 1 | 310 | 1 | 367 | 8.97e-56 | 185 |
MsG0180001900.01.T01 | MTR_5g043605 | 37.725 | 334 | 154 | 10 | 14 | 309 | 22 | 339 | 2.19e-54 | 181 |
MsG0180001900.01.T01 | MTR_8g064790 | 57.325 | 157 | 65 | 1 | 156 | 310 | 182 | 338 | 4.27e-54 | 180 |
MsG0180001900.01.T01 | MTR_8g064790 | 70.312 | 64 | 19 | 0 | 3 | 66 | 1 | 64 | 1.43e-22 | 96.3 |
MsG0180001900.01.T01 | MTR_2g034700 | 52.133 | 211 | 81 | 6 | 103 | 307 | 178 | 374 | 4.33e-54 | 181 |
MsG0180001900.01.T01 | MTR_2g034700 | 67.213 | 61 | 20 | 0 | 13 | 73 | 10 | 70 | 3.13e-19 | 87.4 |
MsG0180001900.01.T01 | MTR_4g014370 | 39.498 | 319 | 162 | 9 | 14 | 305 | 19 | 333 | 5.63e-52 | 174 |
MsG0180001900.01.T01 | MTR_8g467670 | 45.833 | 216 | 103 | 5 | 100 | 310 | 174 | 380 | 8.71e-52 | 175 |
MsG0180001900.01.T01 | MTR_8g467670 | 50.000 | 70 | 25 | 1 | 15 | 84 | 12 | 71 | 1.44e-12 | 68.2 |
MsG0180001900.01.T01 | MTR_4g007940 | 40.711 | 253 | 112 | 6 | 85 | 306 | 94 | 339 | 1.74e-50 | 171 |
MsG0180001900.01.T01 | MTR_3g011120 | 46.798 | 203 | 99 | 4 | 100 | 298 | 172 | 369 | 3.62e-49 | 168 |
MsG0180001900.01.T01 | MTR_3g011120 | 60.870 | 69 | 26 | 1 | 3 | 71 | 1 | 68 | 4.71e-18 | 84.0 |
MsG0180001900.01.T01 | MTR_0129s0070 | 41.518 | 224 | 118 | 4 | 100 | 310 | 174 | 397 | 2.91e-48 | 166 |
MsG0180001900.01.T01 | MTR_0129s0070 | 40.816 | 98 | 43 | 2 | 14 | 107 | 14 | 100 | 3.74e-15 | 75.9 |
MsG0180001900.01.T01 | MTR_5g068490 | 46.544 | 217 | 94 | 6 | 100 | 310 | 78 | 278 | 3.98e-48 | 162 |
MsG0180001900.01.T01 | MTR_8g464770 | 46.117 | 206 | 101 | 3 | 101 | 301 | 172 | 372 | 5.02e-48 | 165 |
MsG0180001900.01.T01 | MTR_8g464770 | 44.706 | 85 | 41 | 1 | 14 | 92 | 9 | 93 | 2.16e-12 | 67.4 |
MsG0180001900.01.T01 | MTR_5g097330 | 42.466 | 219 | 117 | 4 | 100 | 309 | 185 | 403 | 1.19e-47 | 165 |
MsG0180001900.01.T01 | MTR_5g097330 | 52.542 | 59 | 26 | 1 | 14 | 72 | 13 | 69 | 2.26e-11 | 64.3 |
MsG0180001900.01.T01 | MTR_0129s0120 | 41.441 | 222 | 117 | 4 | 100 | 308 | 174 | 395 | 9.24e-47 | 162 |
MsG0180001900.01.T01 | MTR_0129s0120 | 61.017 | 59 | 20 | 1 | 14 | 72 | 14 | 69 | 9.95e-15 | 74.3 |
MsG0180001900.01.T01 | MTR_4g028510 | 42.857 | 259 | 116 | 8 | 66 | 308 | 159 | 401 | 1.32e-46 | 163 |
MsG0180001900.01.T01 | MTR_4g028510 | 56.716 | 67 | 27 | 2 | 7 | 71 | 6 | 72 | 9.25e-14 | 72.0 |
MsG0180001900.01.T01 | MTR_6g080680 | 42.259 | 239 | 110 | 6 | 73 | 301 | 167 | 387 | 4.89e-45 | 157 |
MsG0180001900.01.T01 | MTR_6g080680 | 58.000 | 50 | 21 | 0 | 14 | 63 | 16 | 65 | 1.33e-11 | 65.1 |
MsG0180001900.01.T01 | MTR_0054s0090 | 43.304 | 224 | 112 | 5 | 101 | 310 | 185 | 407 | 1.27e-44 | 157 |
MsG0180001900.01.T01 | MTR_5g097680 | 44.541 | 229 | 99 | 8 | 103 | 310 | 207 | 428 | 1.37e-44 | 157 |
MsG0180001900.01.T01 | MTR_5g097680 | 66.000 | 50 | 17 | 0 | 14 | 63 | 14 | 63 | 1.50e-14 | 73.9 |
MsG0180001900.01.T01 | MTR_2g066170 | 42.152 | 223 | 112 | 6 | 100 | 310 | 170 | 387 | 4.89e-44 | 155 |
MsG0180001900.01.T01 | MTR_2g066170 | 49.275 | 69 | 32 | 1 | 3 | 71 | 1 | 66 | 2.30e-13 | 70.5 |
MsG0180001900.01.T01 | MTR_4g028660 | 42.986 | 221 | 106 | 6 | 101 | 307 | 183 | 397 | 5.04e-44 | 155 |
MsG0180001900.01.T01 | MTR_4g028660 | 55.385 | 65 | 28 | 1 | 8 | 71 | 7 | 71 | 2.42e-15 | 76.3 |
MsG0180001900.01.T01 | MTR_4g027450 | 42.986 | 221 | 106 | 6 | 101 | 307 | 183 | 397 | 5.04e-44 | 155 |
MsG0180001900.01.T01 | MTR_4g027450 | 55.385 | 65 | 28 | 1 | 8 | 71 | 7 | 71 | 2.42e-15 | 76.3 |
MsG0180001900.01.T01 | MTR_2g064950 | 31.152 | 382 | 163 | 11 | 15 | 302 | 8 | 383 | 1.41e-43 | 154 |
MsG0180001900.01.T01 | MTR_5g064700 | 43.162 | 234 | 95 | 10 | 103 | 309 | 146 | 368 | 2.71e-43 | 152 |
MsG0180001900.01.T01 | MTR_2g066200 | 41.909 | 241 | 116 | 8 | 87 | 310 | 156 | 389 | 1.29e-42 | 151 |
MsG0180001900.01.T01 | MTR_2g066200 | 52.941 | 68 | 28 | 1 | 4 | 71 | 3 | 66 | 4.02e-14 | 72.8 |
MsG0180001900.01.T01 | MTR_0831s0010 | 39.269 | 219 | 122 | 3 | 100 | 308 | 203 | 420 | 3.03e-42 | 151 |
MsG0180001900.01.T01 | MTR_0831s0010 | 54.412 | 68 | 30 | 1 | 4 | 71 | 38 | 104 | 1.40e-14 | 74.3 |
MsG0180001900.01.T01 | MTR_2g021800 | 42.017 | 238 | 106 | 10 | 100 | 310 | 185 | 417 | 6.04e-42 | 150 |
MsG0180001900.01.T01 | MTR_2g021800 | 50.000 | 58 | 29 | 0 | 14 | 71 | 13 | 70 | 1.55e-11 | 65.1 |
MsG0180001900.01.T01 | MTR_6g086825 | 42.667 | 225 | 98 | 7 | 101 | 301 | 235 | 452 | 2.15e-41 | 149 |
MsG0180001900.01.T01 | MTR_6g086825 | 55.882 | 68 | 30 | 0 | 3 | 70 | 56 | 123 | 3.84e-16 | 79.0 |
MsG0180001900.01.T01 | MTR_0054s0100 | 41.964 | 224 | 115 | 5 | 101 | 310 | 187 | 409 | 3.12e-41 | 148 |
MsG0180001900.01.T01 | MTR_4g028680 | 41.778 | 225 | 111 | 6 | 100 | 310 | 183 | 401 | 4.86e-41 | 147 |
MsG0180001900.01.T01 | MTR_4g028680 | 60.606 | 66 | 25 | 1 | 7 | 71 | 6 | 71 | 4.34e-17 | 81.6 |
MsG0180001900.01.T01 | MTR_2g104340 | 39.316 | 234 | 118 | 7 | 100 | 310 | 165 | 397 | 9.04e-41 | 146 |
MsG0180001900.01.T01 | MTR_2g022000 | 40.807 | 223 | 102 | 8 | 100 | 295 | 184 | 403 | 1.04e-40 | 147 |
MsG0180001900.01.T01 | MTR_2g022000 | 55.172 | 58 | 26 | 0 | 14 | 71 | 13 | 70 | 3.14e-14 | 73.2 |
MsG0180001900.01.T01 | MTR_6g079790 | 39.914 | 233 | 113 | 6 | 101 | 310 | 82 | 310 | 1.67e-40 | 144 |
MsG0180001900.01.T01 | MTR_6g078010 | 46.196 | 184 | 84 | 4 | 132 | 301 | 145 | 327 | 3.42e-40 | 144 |
MsG0180001900.01.T01 | MTR_2g021920 | 39.827 | 231 | 110 | 8 | 100 | 305 | 43 | 269 | 8.03e-40 | 140 |
MsG0180001900.01.T01 | MTR_2g021770 | 38.627 | 233 | 120 | 5 | 100 | 310 | 177 | 408 | 1.14e-39 | 144 |
MsG0180001900.01.T01 | MTR_2g021770 | 60.000 | 55 | 22 | 0 | 17 | 71 | 12 | 66 | 2.80e-15 | 76.3 |
MsG0180001900.01.T01 | MTR_2g021950 | 39.462 | 223 | 112 | 6 | 100 | 305 | 177 | 393 | 1.61e-39 | 143 |
MsG0180001900.01.T01 | MTR_2g021950 | 50.000 | 52 | 26 | 0 | 15 | 66 | 14 | 65 | 7.64e-12 | 65.9 |
MsG0180001900.01.T01 | MTR_5g022850 | 34.078 | 358 | 177 | 15 | 5 | 310 | 4 | 354 | 2.76e-39 | 141 |
MsG0180001900.01.T01 | MTR_8g041270 | 39.914 | 233 | 116 | 8 | 101 | 310 | 176 | 407 | 4.14e-39 | 142 |
MsG0180001900.01.T01 | MTR_4g014370 | 42.523 | 214 | 108 | 5 | 101 | 305 | 198 | 405 | 4.74e-39 | 142 |
MsG0180001900.01.T01 | MTR_4g014370 | 55.172 | 58 | 25 | 1 | 14 | 71 | 8 | 64 | 6.11e-11 | 63.2 |
MsG0180001900.01.T01 | MTR_4g130330 | 41.778 | 225 | 109 | 7 | 100 | 308 | 172 | 390 | 5.28e-39 | 141 |
MsG0180001900.01.T01 | MTR_4g130330 | 66.667 | 48 | 16 | 0 | 13 | 60 | 3 | 50 | 6.42e-13 | 68.9 |
MsG0180001900.01.T01 | MTR_2g038680 | 40.773 | 233 | 111 | 9 | 100 | 308 | 181 | 410 | 9.22e-39 | 141 |
MsG0180001900.01.T01 | MTR_2g038680 | 50.877 | 57 | 28 | 0 | 14 | 70 | 13 | 69 | 7.64e-12 | 65.9 |
MsG0180001900.01.T01 | MTR_5g097220 | 40.171 | 234 | 110 | 8 | 101 | 308 | 178 | 407 | 1.34e-38 | 141 |
MsG0180001900.01.T01 | MTR_5g097220 | 61.017 | 59 | 22 | 1 | 14 | 72 | 10 | 67 | 3.24e-15 | 75.9 |
MsG0180001900.01.T01 | MTR_6g004450 | 42.326 | 215 | 111 | 7 | 100 | 305 | 55 | 265 | 3.37e-38 | 136 |
MsG0180001900.01.T01 | MTR_6g079770 | 37.692 | 260 | 126 | 7 | 73 | 306 | 165 | 414 | 1.08e-37 | 139 |
MsG0180001900.01.T01 | MTR_6g079770 | 56.897 | 58 | 24 | 1 | 15 | 71 | 15 | 72 | 2.47e-13 | 70.5 |
MsG0180001900.01.T01 | MTR_4g117550 | 39.352 | 216 | 108 | 5 | 100 | 310 | 177 | 374 | 1.15e-37 | 137 |
MsG0180001900.01.T01 | MTR_4g117550 | 57.627 | 59 | 25 | 0 | 14 | 72 | 14 | 72 | 3.70e-15 | 75.5 |
MsG0180001900.01.T01 | MTR_5g024260 | 42.857 | 210 | 89 | 8 | 100 | 287 | 184 | 384 | 1.80e-37 | 138 |
MsG0180001900.01.T01 | MTR_5g024260 | 38.251 | 183 | 87 | 7 | 1 | 165 | 5 | 179 | 1.67e-20 | 91.3 |
MsG0180001900.01.T01 | MTR_5g076490 | 46.696 | 227 | 97 | 9 | 104 | 309 | 113 | 336 | 1.82e-37 | 136 |
MsG0180001900.01.T01 | MTR_4g028750 | 40.404 | 198 | 102 | 5 | 101 | 287 | 184 | 376 | 1.98e-37 | 137 |
MsG0180001900.01.T01 | MTR_4g028750 | 58.333 | 60 | 24 | 1 | 13 | 71 | 12 | 71 | 1.17e-12 | 68.2 |
MsG0180001900.01.T01 | MTR_6g090180 | 40.455 | 220 | 114 | 6 | 104 | 307 | 218 | 436 | 3.88e-37 | 137 |
MsG0180001900.01.T01 | MTR_6g090180 | 50.685 | 73 | 33 | 1 | 1 | 70 | 28 | 100 | 2.23e-14 | 73.6 |
MsG0180001900.01.T01 | MTR_6g478230 | 38.397 | 237 | 100 | 6 | 101 | 310 | 191 | 408 | 5.09e-37 | 137 |
MsG0180001900.01.T01 | MTR_6g478230 | 60.345 | 58 | 22 | 1 | 13 | 70 | 23 | 79 | 3.33e-12 | 67.0 |
MsG0180001900.01.T01 | MTR_0129s0050 | 37.815 | 238 | 118 | 6 | 101 | 309 | 172 | 408 | 8.43e-37 | 136 |
MsG0180001900.01.T01 | MTR_0129s0050 | 62.000 | 50 | 19 | 0 | 14 | 63 | 11 | 60 | 3.56e-15 | 75.9 |
MsG0180001900.01.T01 | MTR_6g090260 | 43.243 | 185 | 89 | 5 | 132 | 301 | 73 | 256 | 1.17e-36 | 132 |
MsG0180001900.01.T01 | MTR_6g090260 | 53.030 | 66 | 28 | 1 | 1 | 66 | 7 | 69 | 3.71e-14 | 71.6 |
MsG0180001900.01.T01 | MTR_8g063350 | 32.123 | 358 | 162 | 15 | 1 | 299 | 1 | 336 | 4.55e-36 | 132 |
MsG0180001900.01.T01 | MTR_0134s0060 | 37.548 | 261 | 133 | 7 | 73 | 310 | 160 | 413 | 5.95e-36 | 134 |
MsG0180001900.01.T01 | MTR_5g023970 | 41.573 | 178 | 95 | 3 | 132 | 300 | 9 | 186 | 6.93e-36 | 128 |
MsG0180001900.01.T01 | MTR_6g079810 | 40.175 | 229 | 111 | 7 | 100 | 306 | 236 | 460 | 1.46e-35 | 134 |
MsG0180001900.01.T01 | MTR_6g079810 | 55.357 | 56 | 25 | 0 | 11 | 66 | 64 | 119 | 1.03e-11 | 65.5 |
MsG0180001900.01.T01 | MTR_6g087620 | 44.262 | 183 | 85 | 5 | 134 | 299 | 97 | 279 | 1.80e-35 | 129 |
MsG0180001900.01.T01 | MTR_5g097350 | 38.095 | 210 | 118 | 6 | 100 | 305 | 182 | 383 | 1.97e-35 | 132 |
MsG0180001900.01.T01 | MTR_7g017130 | 38.117 | 223 | 121 | 6 | 101 | 310 | 180 | 398 | 3.54e-35 | 131 |
MsG0180001900.01.T01 | MTR_7g017130 | 60.000 | 55 | 22 | 0 | 17 | 71 | 18 | 72 | 1.11e-13 | 71.2 |
MsG0180001900.01.T01 | MTR_5g074800 | 37.555 | 229 | 109 | 8 | 100 | 303 | 119 | 338 | 5.50e-35 | 130 |
MsG0180001900.01.T01 | MTR_5g092860 | 31.722 | 331 | 143 | 11 | 35 | 284 | 20 | 348 | 7.90e-35 | 130 |
MsG0180001900.01.T01 | MTR_7g017040 | 37.391 | 230 | 117 | 5 | 101 | 309 | 175 | 398 | 8.46e-35 | 130 |
MsG0180001900.01.T01 | MTR_7g017040 | 45.783 | 83 | 42 | 1 | 15 | 94 | 14 | 96 | 2.73e-13 | 70.1 |
MsG0180001900.01.T01 | MTR_2g066150 | 39.726 | 219 | 104 | 7 | 100 | 310 | 163 | 361 | 1.13e-34 | 129 |
MsG0180001900.01.T01 | MTR_2g066150 | 43.478 | 69 | 36 | 1 | 3 | 71 | 1 | 66 | 4.66e-11 | 63.2 |
MsG0180001900.01.T01 | MTR_8g033000 | 41.624 | 197 | 92 | 6 | 131 | 309 | 172 | 363 | 2.04e-34 | 129 |
MsG0180001900.01.T01 | MTR_5g086590 | 38.421 | 190 | 96 | 5 | 100 | 278 | 49 | 228 | 2.07e-34 | 125 |
MsG0180001900.01.T01 | MTR_2g065860 | 36.015 | 261 | 139 | 6 | 60 | 310 | 147 | 389 | 2.41e-34 | 129 |
MsG0180001900.01.T01 | MTR_2g065860 | 53.448 | 58 | 27 | 0 | 14 | 71 | 9 | 66 | 1.32e-12 | 68.2 |
MsG0180001900.01.T01 | MTR_8g039500 | 40.526 | 190 | 96 | 5 | 100 | 278 | 163 | 346 | 3.63e-34 | 127 |
MsG0180001900.01.T01 | MTR_8g039500 | 47.826 | 69 | 33 | 1 | 3 | 71 | 1 | 66 | 1.21e-13 | 70.9 |
MsG0180001900.01.T01 | MTR_1g007410 | 37.900 | 219 | 117 | 7 | 100 | 301 | 182 | 398 | 6.69e-34 | 128 |
MsG0180001900.01.T01 | MTR_1g007410 | 51.724 | 58 | 28 | 0 | 14 | 71 | 19 | 76 | 4.32e-11 | 63.5 |
MsG0180001900.01.T01 | MTR_1g007450 | 37.383 | 214 | 113 | 5 | 101 | 295 | 171 | 382 | 1.56e-32 | 125 |
MsG0180001900.01.T01 | MTR_1g007450 | 51.786 | 56 | 25 | 1 | 17 | 72 | 12 | 65 | 9.39e-11 | 62.8 |
MsG0180001900.01.T01 | MTR_6g090250 | 35.294 | 272 | 135 | 7 | 64 | 301 | 152 | 416 | 1.79e-32 | 124 |
MsG0180001900.01.T01 | MTR_4g055820 | 42.857 | 189 | 82 | 6 | 100 | 264 | 172 | 358 | 2.21e-32 | 123 |
MsG0180001900.01.T01 | MTR_4g055820 | 47.887 | 71 | 34 | 1 | 1 | 71 | 1 | 68 | 1.09e-12 | 68.2 |
MsG0180001900.01.T01 | MTR_7g017170 | 39.196 | 199 | 104 | 6 | 101 | 286 | 180 | 374 | 2.34e-32 | 124 |
MsG0180001900.01.T01 | MTR_7g017170 | 60.000 | 55 | 22 | 0 | 17 | 71 | 18 | 72 | 1.03e-13 | 71.6 |
MsG0180001900.01.T01 | MTR_2g065840 | 38.288 | 222 | 112 | 7 | 100 | 308 | 179 | 388 | 2.50e-32 | 124 |
MsG0180001900.01.T01 | MTR_2g065840 | 53.571 | 56 | 26 | 0 | 16 | 71 | 11 | 66 | 3.59e-13 | 69.7 |
MsG0180001900.01.T01 | MTR_5g059430 | 38.073 | 218 | 116 | 7 | 101 | 302 | 205 | 419 | 3.26e-32 | 124 |
MsG0180001900.01.T01 | MTR_5g059430 | 66.102 | 59 | 20 | 0 | 13 | 71 | 22 | 80 | 1.22e-16 | 80.1 |
MsG0180001900.01.T01 | MTR_5g096910 | 36.744 | 215 | 122 | 6 | 100 | 308 | 186 | 392 | 3.58e-32 | 123 |
MsG0180001900.01.T01 | MTR_5g096910 | 49.153 | 59 | 30 | 0 | 1 | 59 | 1 | 59 | 1.08e-11 | 65.5 |
MsG0180001900.01.T01 | MTR_1g050312 | 39.303 | 201 | 93 | 8 | 100 | 291 | 97 | 277 | 5.75e-32 | 120 |
MsG0180001900.01.T01 | MTR_7g111700 | 37.387 | 222 | 100 | 7 | 100 | 310 | 173 | 366 | 5.97e-32 | 122 |
MsG0180001900.01.T01 | MTR_7g069550 | 39.286 | 224 | 110 | 10 | 100 | 303 | 176 | 393 | 7.62e-32 | 122 |
MsG0180001900.01.T01 | MTR_7g069550 | 53.521 | 71 | 30 | 1 | 1 | 71 | 1 | 68 | 3.96e-15 | 75.5 |
MsG0180001900.01.T01 | MTR_7g019250 | 39.500 | 200 | 88 | 4 | 100 | 284 | 230 | 411 | 1.17e-31 | 123 |
MsG0180001900.01.T01 | MTR_5g069390 | 35.874 | 223 | 119 | 6 | 101 | 306 | 199 | 414 | 1.75e-31 | 123 |
MsG0180001900.01.T01 | MTR_5g069390 | 59.322 | 59 | 24 | 0 | 13 | 71 | 22 | 80 | 3.37e-14 | 73.2 |
MsG0180001900.01.T01 | MTR_6g461660 | 40.183 | 219 | 109 | 9 | 101 | 305 | 186 | 396 | 1.08e-30 | 119 |
MsG0180001900.01.T01 | MTR_6g461660 | 53.448 | 58 | 27 | 0 | 14 | 71 | 16 | 73 | 4.42e-12 | 66.6 |
MsG0180001900.01.T01 | MTR_5g092850 | 35.526 | 228 | 121 | 9 | 101 | 302 | 175 | 402 | 2.56e-30 | 118 |
MsG0180001900.01.T01 | MTR_5g092850 | 53.846 | 65 | 23 | 2 | 11 | 70 | 5 | 67 | 4.66e-12 | 66.6 |
MsG0180001900.01.T01 | MTR_5g037680 | 36.607 | 224 | 114 | 7 | 92 | 301 | 169 | 378 | 3.58e-30 | 119 |
MsG0180001900.01.T01 | MTR_5g037680 | 64.407 | 59 | 21 | 0 | 13 | 71 | 4 | 62 | 1.30e-16 | 80.5 |
MsG0180001900.01.T01 | MTR_4g016000 | 39.645 | 169 | 94 | 5 | 101 | 268 | 36 | 197 | 4.87e-30 | 114 |
MsG0180001900.01.T01 | MTR_3g018750 | 34.322 | 236 | 124 | 8 | 101 | 309 | 10 | 241 | 6.32e-30 | 114 |
MsG0180001900.01.T01 | MTR_8g033110 | 30.769 | 338 | 164 | 13 | 8 | 302 | 98 | 408 | 7.86e-30 | 117 |
MsG0180001900.01.T01 | MTR_8g033110 | 64.151 | 53 | 19 | 0 | 12 | 64 | 9 | 61 | 1.61e-14 | 73.9 |
MsG0180001900.01.T01 | MTR_8g063310 | 34.934 | 229 | 123 | 6 | 100 | 307 | 172 | 395 | 1.01e-29 | 117 |
MsG0180001900.01.T01 | MTR_7g079640 | 41.243 | 177 | 81 | 6 | 134 | 292 | 188 | 359 | 1.24e-29 | 116 |
MsG0180001900.01.T01 | MTR_7g079640 | 57.143 | 56 | 24 | 0 | 16 | 71 | 12 | 67 | 2.35e-12 | 67.4 |
MsG0180001900.01.T01 | MTR_7g016930 | 31.153 | 321 | 152 | 8 | 14 | 267 | 13 | 331 | 1.44e-29 | 115 |
MsG0180001900.01.T01 | MTR_1g053510 | 39.474 | 190 | 100 | 5 | 131 | 310 | 225 | 409 | 1.71e-29 | 116 |
MsG0180001900.01.T01 | MTR_1g053510 | 45.455 | 99 | 46 | 2 | 1 | 99 | 1 | 91 | 2.27e-18 | 85.1 |
MsG0180001900.01.T01 | MTR_7g023800 | 39.884 | 173 | 94 | 3 | 145 | 307 | 137 | 309 | 2.91e-29 | 114 |
MsG0180001900.01.T01 | MTR_8g033140 | 37.634 | 186 | 105 | 3 | 131 | 310 | 239 | 419 | 7.95e-29 | 114 |
MsG0180001900.01.T01 | MTR_8g033140 | 49.398 | 83 | 33 | 1 | 2 | 84 | 4 | 77 | 8.11e-16 | 77.8 |
MsG0180001900.01.T01 | MTR_8g012090 | 41.290 | 155 | 79 | 4 | 134 | 278 | 182 | 334 | 9.68e-29 | 113 |
MsG0180001900.01.T01 | MTR_8g012090 | 60.345 | 58 | 23 | 0 | 14 | 71 | 13 | 70 | 3.35e-15 | 75.5 |
MsG0180001900.01.T01 | MTR_5g094350 | 33.333 | 276 | 87 | 13 | 8 | 195 | 4 | 270 | 1.95e-28 | 111 |
MsG0180001900.01.T01 | MTR_8g032980 | 34.109 | 258 | 118 | 10 | 100 | 310 | 170 | 422 | 2.51e-28 | 113 |
MsG0180001900.01.T01 | MTR_8g032980 | 46.809 | 94 | 48 | 2 | 1 | 94 | 1 | 92 | 2.07e-17 | 82.4 |
MsG0180001900.01.T01 | MTR_8g063370 | 39.234 | 209 | 112 | 8 | 101 | 300 | 181 | 383 | 3.71e-28 | 112 |
MsG0180001900.01.T01 | MTR_8g063370 | 45.570 | 79 | 36 | 1 | 1 | 72 | 1 | 79 | 2.60e-11 | 64.3 |
MsG0180001900.01.T01 | MTR_8g063330 | 38.764 | 178 | 93 | 5 | 100 | 264 | 174 | 348 | 4.34e-28 | 113 |
MsG0180001900.01.T01 | MTR_8g063330 | 52.174 | 69 | 32 | 1 | 3 | 71 | 1 | 68 | 8.51e-14 | 72.0 |
MsG0180001900.01.T01 | MTR_6g009350 | 38.172 | 186 | 98 | 6 | 100 | 272 | 14 | 195 | 4.71e-28 | 107 |
MsG0180001900.01.T01 | MTR_8g046200 | 42.135 | 178 | 94 | 5 | 131 | 301 | 239 | 414 | 7.11e-28 | 112 |
MsG0180001900.01.T01 | MTR_8g046200 | 57.812 | 64 | 27 | 0 | 4 | 67 | 3 | 66 | 1.88e-16 | 79.7 |
MsG0180001900.01.T01 | MTR_5g091140 | 37.313 | 201 | 106 | 6 | 103 | 283 | 190 | 390 | 1.66e-27 | 111 |
MsG0180001900.01.T01 | MTR_5g091140 | 53.521 | 71 | 29 | 2 | 2 | 71 | 36 | 103 | 1.51e-11 | 65.1 |
MsG0180001900.01.T01 | MTR_5g097850 | 36.957 | 184 | 100 | 3 | 139 | 308 | 63 | 244 | 3.40e-27 | 107 |
MsG0180001900.01.T01 | MTR_8g018110 | 39.548 | 177 | 92 | 6 | 131 | 302 | 224 | 390 | 5.12e-27 | 109 |
MsG0180001900.01.T01 | MTR_8g018110 | 61.538 | 52 | 20 | 0 | 13 | 64 | 10 | 61 | 4.53e-14 | 72.4 |
MsG0180001900.01.T01 | MTR_7g104710 | 31.786 | 280 | 119 | 10 | 2 | 216 | 6 | 278 | 5.57e-27 | 108 |
MsG0180001900.01.T01 | MTR_2g104280 | 33.190 | 232 | 131 | 6 | 101 | 309 | 175 | 405 | 8.23e-27 | 108 |
MsG0180001900.01.T01 | MTR_5g096630 | 34.177 | 237 | 126 | 9 | 100 | 309 | 181 | 414 | 1.27e-26 | 108 |
MsG0180001900.01.T01 | MTR_5g096630 | 63.462 | 52 | 19 | 0 | 20 | 71 | 21 | 72 | 2.89e-13 | 70.1 |
MsG0180001900.01.T01 | MTR_8g046310 | 37.989 | 179 | 102 | 5 | 131 | 302 | 195 | 371 | 1.44e-26 | 108 |
MsG0180001900.01.T01 | MTR_8g046310 | 67.188 | 64 | 20 | 1 | 4 | 66 | 3 | 66 | 7.04e-20 | 89.4 |
MsG0180001900.01.T01 | MTR_4g102410 | 36.161 | 224 | 124 | 8 | 100 | 305 | 224 | 446 | 4.94e-26 | 107 |
MsG0180001900.01.T01 | MTR_4g102410 | 49.123 | 57 | 29 | 0 | 15 | 71 | 59 | 115 | 7.91e-11 | 62.8 |
MsG0180001900.01.T01 | MTR_6g079730 | 45.038 | 131 | 63 | 2 | 180 | 302 | 14 | 143 | 5.43e-26 | 100 |
MsG0180001900.01.T01 | MTR_8g033090 | 37.037 | 189 | 96 | 4 | 131 | 302 | 223 | 405 | 5.63e-26 | 107 |
MsG0180001900.01.T01 | MTR_8g033090 | 63.462 | 52 | 19 | 0 | 13 | 64 | 10 | 61 | 1.99e-14 | 73.6 |
MsG0180001900.01.T01 | MTR_5g074850 | 35.238 | 210 | 114 | 7 | 101 | 289 | 196 | 404 | 8.62e-26 | 108 |
MsG0180001900.01.T01 | MTR_5g074850 | 54.930 | 71 | 25 | 3 | 4 | 72 | 25 | 90 | 2.02e-13 | 71.2 |
MsG0180001900.01.T01 | MTR_8g046220 | 37.778 | 180 | 100 | 6 | 131 | 302 | 224 | 399 | 1.05e-25 | 105 |
MsG0180001900.01.T01 | MTR_8g046220 | 48.889 | 90 | 38 | 1 | 1 | 90 | 1 | 82 | 3.17e-18 | 84.7 |
MsG0180001900.01.T01 | MTR_5g075370 | 34.762 | 210 | 115 | 7 | 101 | 289 | 172 | 380 | 1.47e-25 | 107 |
MsG0180001900.01.T01 | MTR_5g075370 | 52.459 | 61 | 25 | 2 | 14 | 72 | 5 | 63 | 7.71e-11 | 63.2 |
MsG0180001900.01.T01 | MTR_7g017150 | 38.418 | 177 | 96 | 6 | 123 | 289 | 73 | 246 | 2.46e-25 | 102 |
MsG0180001900.01.T01 | MTR_8g035690 | 37.838 | 185 | 104 | 6 | 131 | 308 | 122 | 302 | 2.87e-25 | 103 |
MsG0180001900.01.T01 | MTR_5g098950 | 38.150 | 173 | 77 | 6 | 100 | 267 | 127 | 274 | 7.85e-25 | 101 |
MsG0180001900.01.T01 | MTR_3g030620 | 37.805 | 164 | 87 | 5 | 157 | 306 | 17 | 179 | 8.85e-25 | 99.0 |
MsG0180001900.01.T01 | MTR_5g086780 | 28.214 | 280 | 125 | 6 | 15 | 284 | 14 | 227 | 7.91e-24 | 97.4 |
MsG0180001900.01.T01 | MTR_7g017120 | 37.725 | 167 | 93 | 5 | 133 | 289 | 80 | 245 | 8.20e-24 | 98.6 |
MsG0180001900.01.T01 | MTR_8g013000 | 35.749 | 207 | 106 | 8 | 100 | 288 | 171 | 368 | 4.69e-23 | 98.6 |
MsG0180001900.01.T01 | MTR_8g013000 | 56.140 | 57 | 25 | 0 | 15 | 71 | 8 | 64 | 1.78e-12 | 67.8 |
MsG0180001900.01.T01 | MTR_5g097660 | 45.098 | 102 | 55 | 1 | 202 | 302 | 12 | 113 | 1.21e-22 | 91.3 |
MsG0180001900.01.T01 | MTR_1g007430 | 37.363 | 182 | 87 | 6 | 101 | 267 | 155 | 324 | 1.95e-22 | 95.9 |
MsG0180001900.01.T01 | MTR_5g066420 | 41.600 | 125 | 65 | 1 | 180 | 296 | 23 | 147 | 2.25e-22 | 91.3 |
MsG0180001900.01.T01 | MTR_1g050308 | 31.276 | 243 | 98 | 7 | 80 | 310 | 163 | 348 | 2.97e-22 | 95.5 |
MsG0180001900.01.T01 | MTR_1g050308 | 48.571 | 70 | 33 | 1 | 2 | 71 | 22 | 88 | 1.84e-12 | 67.4 |
MsG0180001900.01.T01 | MTR_1g115205 | 32.127 | 221 | 91 | 8 | 7 | 170 | 18 | 236 | 3.19e-22 | 94.0 |
MsG0180001900.01.T01 | MTR_5g097540 | 33.728 | 169 | 105 | 3 | 133 | 296 | 96 | 262 | 1.18e-21 | 93.2 |
MsG0180001900.01.T01 | MTR_2g022020 | 46.078 | 102 | 53 | 1 | 204 | 305 | 17 | 116 | 2.61e-21 | 87.4 |
MsG0180001900.01.T01 | MTR_7g101200 | 32.443 | 262 | 130 | 13 | 31 | 271 | 1 | 236 | 7.27e-21 | 89.7 |
MsG0180001900.01.T01 | MTR_5g072060 | 34.286 | 210 | 90 | 9 | 100 | 285 | 163 | 348 | 1.15e-19 | 89.7 |
MsG0180001900.01.T01 | MTR_5g072060 | 58.929 | 56 | 23 | 0 | 16 | 71 | 5 | 60 | 8.09e-14 | 72.4 |
MsG0180001900.01.T01 | MTR_5g096920 | 36.000 | 150 | 89 | 3 | 163 | 306 | 1 | 149 | 1.77e-19 | 84.0 |
MsG0180001900.01.T01 | MTR_3g019290 | 32.941 | 170 | 65 | 4 | 13 | 137 | 10 | 175 | 3.41e-19 | 84.0 |
MsG0180001900.01.T01 | MTR_5g097650 | 56.338 | 71 | 31 | 0 | 1 | 71 | 6 | 76 | 6.23e-19 | 82.4 |
MsG0180001900.01.T01 | MTR_3g047580 | 54.286 | 70 | 29 | 2 | 3 | 71 | 1 | 68 | 2.57e-17 | 77.0 |
MsG0180001900.01.T01 | MTR_5g036250 | 45.361 | 97 | 52 | 1 | 205 | 301 | 8 | 103 | 7.80e-17 | 77.4 |
MsG0180001900.01.T01 | MTR_8g041440 | 58.621 | 58 | 24 | 0 | 14 | 71 | 12 | 69 | 1.35e-15 | 72.0 |
MsG0180001900.01.T01 | MTR_6g070880 | 59.322 | 59 | 22 | 1 | 14 | 70 | 29 | 87 | 2.92e-14 | 72.0 |
MsG0180001900.01.T01 | MTR_6g071420 | 59.322 | 59 | 22 | 1 | 14 | 70 | 29 | 87 | 2.92e-14 | 72.0 |
MsG0180001900.01.T01 | MTR_1g050305 | 44.304 | 79 | 39 | 3 | 210 | 283 | 21 | 99 | 7.77e-14 | 68.2 |
MsG0180001900.01.T01 | MTR_3g047540 | 53.125 | 64 | 28 | 2 | 130 | 192 | 2 | 64 | 7.80e-14 | 66.6 |
MsG0180001900.01.T01 | MTR_5g096900 | 36.364 | 143 | 70 | 4 | 100 | 232 | 182 | 313 | 9.14e-14 | 71.2 |
MsG0180001900.01.T01 | MTR_5g096900 | 55.932 | 59 | 26 | 0 | 14 | 72 | 9 | 67 | 2.42e-13 | 69.7 |
MsG0180001900.01.T01 | MTR_6g087660 | 54.688 | 64 | 26 | 1 | 2 | 65 | 6 | 66 | 3.05e-13 | 67.8 |
MsG0180001900.01.T01 | MTR_8g073570 | 54.902 | 51 | 23 | 0 | 15 | 65 | 8 | 58 | 6.15e-13 | 66.2 |
MsG0180001900.01.T01 | MTR_1g076810 | 55.172 | 58 | 26 | 0 | 14 | 71 | 15 | 72 | 1.19e-12 | 68.9 |
MsG0180001900.01.T01 | MTR_5g097820 | 51.471 | 68 | 33 | 0 | 4 | 71 | 10 | 77 | 1.73e-12 | 66.6 |
MsG0180001900.01.T01 | MTR_6g465360 | 59.184 | 49 | 20 | 0 | 15 | 63 | 60 | 108 | 4.16e-12 | 65.9 |
MsG0180001900.01.T01 | MTR_5g037190 | 56.364 | 55 | 24 | 0 | 17 | 71 | 16 | 70 | 2.09e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 58 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCCGTCAGCATATCAATTT+TGG | 0.112295 | 1:+28997936 | MsG0180001900.01.T01:CDS |
TCTAGTTTGATGGTGTTAAA+TGG | 0.166647 | 1:+28997877 | MsG0180001900.01.T01:CDS |
GTGCCATTGGTTTGGGGATT+GGG | 0.190057 | 1:+28997768 | MsG0180001900.01.T01:CDS |
ATGGGATGTGCCATTGGTTT+GGG | 0.203056 | 1:+28997761 | MsG0180001900.01.T01:CDS |
CAACTAAACTTCTTCTGATT+TGG | 0.218015 | 1:-28997042 | None:intergenic |
AATCGCTTGAAAGACTTAAT+AGG | 0.227993 | 1:-28997117 | None:intergenic |
ATGTGTGTTTCCTCTTCATC+TGG | 0.237516 | 1:+28997273 | MsG0180001900.01.T01:CDS |
CTATGACACCTGACCCGTTT+TGG | 0.248405 | 1:+28997650 | MsG0180001900.01.T01:CDS |
TAGATCTATTTCTAGTTTGA+TGG | 0.291079 | 1:+28997867 | MsG0180001900.01.T01:CDS |
ATTTGATCCTTTGTCTTGTA+TGG | 0.303229 | 1:+28997999 | MsG0180001900.01.T01:CDS |
TGTGCCATTGGTTTGGGGAT+TGG | 0.315413 | 1:+28997767 | MsG0180001900.01.T01:CDS |
AAGGAAAACTTTGGTGCAAT+TGG | 0.318301 | 1:+28998165 | MsG0180001900.01.T01:CDS |
AATGGGATGTGCCATTGGTT+TGG | 0.327710 | 1:+28997760 | MsG0180001900.01.T01:CDS |
TTTCAATCAATCTATGGCTT+TGG | 0.357043 | 1:+28997017 | None:intergenic |
ACCACTAATGTGTACTTCAA+TGG | 0.379048 | 1:+28997742 | MsG0180001900.01.T01:CDS |
ATCATACGGTGAATGAGATT+TGG | 0.395350 | 1:-28997217 | None:intergenic |
CTAGTTTGATGGTGTTAAAT+GGG | 0.401033 | 1:+28997878 | MsG0180001900.01.T01:CDS |
CGAGAATAACCATTTAATAT+AGG | 0.414820 | 1:-28997613 | None:intergenic |
CTATATTAAATGGTTATTCT+CGG | 0.428730 | 1:+28997614 | MsG0180001900.01.T01:CDS |
CCACTAATGTGTACTTCAAT+GGG | 0.441075 | 1:+28997743 | MsG0180001900.01.T01:CDS |
ATCGCTTGAAAGACTTAATA+GGG | 0.442419 | 1:-28997116 | None:intergenic |
TTTAACTACTCAGGTGTTTG+AGG | 0.442784 | 1:+28998095 | MsG0180001900.01.T01:CDS |
CAAAACGGGTCAGGTGTCAT+AGG | 0.456403 | 1:-28997649 | None:intergenic |
CGCTATATATCTCCCAAAAC+GGG | 0.458668 | 1:-28997663 | None:intergenic |
CCCATTGAAGTACACATTAG+TGG | 0.461513 | 1:-28997743 | None:intergenic |
CATTGGTTTGGGGATTGGGA+TGG | 0.463035 | 1:+28997772 | MsG0180001900.01.T01:CDS |
TATATTAAATGGTTATTCTC+GGG | 0.471114 | 1:+28997615 | MsG0180001900.01.T01:CDS |
TGTGTGTTTCCTCTTCATCT+GGG | 0.474964 | 1:+28997274 | MsG0180001900.01.T01:CDS |
TTACCTGCGTTCGTAAATCA+TGG | 0.480022 | 1:+28997139 | MsG0180001900.01.T01:CDS |
GTACCTTACAAGGAAAACTT+TGG | 0.488182 | 1:+28998156 | MsG0180001900.01.T01:CDS |
GTCTATCGAAGTTGGAAAGA+AGG | 0.490660 | 1:+28998026 | MsG0180001900.01.T01:CDS |
ACGCTATATATCTCCCAAAA+CGG | 0.491918 | 1:-28997664 | None:intergenic |
ACTTCAATGGGATGTGCCAT+TGG | 0.494061 | 1:+28997755 | MsG0180001900.01.T01:CDS |
TATATCTCCCAAAACGGGTC+AGG | 0.494550 | 1:-28997658 | None:intergenic |
TTGTCTGATCGTACCTTACA+AGG | 0.495190 | 1:+28998146 | MsG0180001900.01.T01:CDS |
TTTGGGTGAAATTGGTGTCA+AGG | 0.495589 | 1:+28997954 | MsG0180001900.01.T01:CDS |
GTGGTATTAGAGATAGGAAC+TGG | 0.497084 | 1:-28997724 | None:intergenic |
ATAGCGTAAGAAGTAACTCT+TGG | 0.497353 | 1:+28997680 | MsG0180001900.01.T01:CDS |
ACATTAGTGGTATTAGAGAT+AGG | 0.502239 | 1:-28997730 | None:intergenic |
TTTATTCGATTTCAGGTCAA+AGG | 0.505870 | 1:+28997315 | MsG0180001900.01.T01:CDS |
AAATTGGTGTCAAGGAATCA+TGG | 0.508749 | 1:+28997962 | MsG0180001900.01.T01:CDS |
ATACATGACGATCTTGCATT+CGG | 0.512443 | 1:+28997078 | MsG0180001900.01.T01:CDS |
ATGGAGCGGTCTATCGAAGT+TGG | 0.528610 | 1:+28998018 | MsG0180001900.01.T01:CDS |
TGGGATGTGCCATTGGTTTG+GGG | 0.537428 | 1:+28997762 | MsG0180001900.01.T01:CDS |
AATTGATATGCTGACGGACA+TGG | 0.555119 | 1:-28997932 | None:intergenic |
AGATCTAGCATGCCAATCTA+CGG | 0.567281 | 1:-28997851 | None:intergenic |
ACCCAAAATTGATATGCTGA+CGG | 0.573441 | 1:-28997938 | None:intergenic |
ATCCTTTGTCTTGTATGGAG+CGG | 0.582088 | 1:+28998004 | MsG0180001900.01.T01:CDS |
TCTATCGAAGTTGGAAAGAA+GGG | 0.599579 | 1:+28998027 | MsG0180001900.01.T01:CDS |
ACATGTTACAGATGACTACA+AGG | 0.599857 | 1:+28997567 | MsG0180001900.01.T01:intron |
GAAACGCAACCCAGATGAAG+AGG | 0.600584 | 1:-28997283 | None:intergenic |
ATTTGGTAACAAGATTGTTG+CGG | 0.604527 | 1:-28997200 | None:intergenic |
CATCCCAATCCCCAAACCAA+TGG | 0.610064 | 1:-28997771 | None:intergenic |
AGGAACTGGCATATCAACAA+TGG | 0.615746 | 1:-28997710 | None:intergenic |
GACCGCTCCATACAAGACAA+AGG | 0.663283 | 1:-28998006 | None:intergenic |
GAAATCGAATAAAACAAACA+TGG | 0.664560 | 1:-28997305 | None:intergenic |
AGACCATGATTTACGAACGC+AGG | 0.673428 | 1:-28997142 | None:intergenic |
GTCATTCAATTTGAGCAACG+AGG | 0.682800 | 1:+28997813 | MsG0180001900.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTCTTAAGTAAAAAAAA+CGG | + | Chr1:28998054-28998073 | MsG0180001900.01.T01:CDS | 10.0% |
!! | CTATATTAAATGGTTATTCT+CGG | + | Chr1:28997614-28997633 | MsG0180001900.01.T01:CDS | 20.0% |
!! | TATATTAAATGGTTATTCTC+GGG | + | Chr1:28997615-28997634 | MsG0180001900.01.T01:CDS | 20.0% |
!!! | ACTTTTCTTCTTAATGTTTT+AGG | + | Chr1:28997383-28997402 | MsG0180001900.01.T01:intron | 20.0% |
! | CGAGAATAACCATTTAATAT+AGG | - | Chr1:28997616-28997635 | None:intergenic | 25.0% |
! | CTAAATTGCTATGATCTAAA+TGG | - | Chr1:28997442-28997461 | None:intergenic | 25.0% |
! | GAAATCGAATAAAACAAACA+TGG | - | Chr1:28997308-28997327 | None:intergenic | 25.0% |
!! | AGTTTTCGTCCTATATTAAA+TGG | + | Chr1:28997604-28997623 | MsG0180001900.01.T01:CDS | 25.0% |
!!! | ATATCAATTTTGGGTGAAAT+TGG | + | Chr1:28997946-28997965 | MsG0180001900.01.T01:CDS | 25.0% |
!!! | GGAAGTTTTGAATGAAATTA+GGG | - | Chr1:28997182-28997201 | None:intergenic | 25.0% |
!!! | TAGATCTATTTCTAGTTTGA+TGG | + | Chr1:28997867-28997886 | MsG0180001900.01.T01:CDS | 25.0% |
!!! | TGTTTGTTTTATTCGATTTC+AGG | + | Chr1:28997308-28997327 | MsG0180001900.01.T01:CDS | 25.0% |
!!! | TTGTTTTGATTTAACTACTC+AGG | + | Chr1:28998086-28998105 | MsG0180001900.01.T01:CDS | 25.0% |
!!! | TTTGAGGAGATTGATTTTAA+AGG | + | Chr1:28998111-28998130 | MsG0180001900.01.T01:CDS | 25.0% |
AATCGCTTGAAAGACTTAAT+AGG | - | Chr1:28997120-28997139 | None:intergenic | 30.0% | |
ACATTAGTGGTATTAGAGAT+AGG | - | Chr1:28997733-28997752 | None:intergenic | 30.0% | |
ATCATAGCAATTTAGCACTT+TGG | + | Chr1:28997447-28997466 | MsG0180001900.01.T01:intron | 30.0% | |
ATCGCTTGAAAGACTTAATA+GGG | - | Chr1:28997119-28997138 | None:intergenic | 30.0% | |
ATTTGATCCTTTGTCTTGTA+TGG | + | Chr1:28997999-28998018 | MsG0180001900.01.T01:CDS | 30.0% | |
CAACTAAACTTCTTCTGATT+TGG | - | Chr1:28997045-28997064 | None:intergenic | 30.0% | |
TCATCATCATCATCATCATA+CGG | - | Chr1:28997234-28997253 | None:intergenic | 30.0% | |
TGAAAGTCATCGACAAAATT+AGG | - | Chr1:28997527-28997546 | None:intergenic | 30.0% | |
! | ATTTGGTAACAAGATTGTTG+CGG | - | Chr1:28997203-28997222 | None:intergenic | 30.0% |
! | TTTATTCGATTTCAGGTCAA+AGG | + | Chr1:28997315-28997334 | MsG0180001900.01.T01:CDS | 30.0% |
!! | AAAAGTATCGTCAAATTGAG+GGG | - | Chr1:28997369-28997388 | None:intergenic | 30.0% |
!! | AGAAAAGTATCGTCAAATTG+AGG | - | Chr1:28997371-28997390 | None:intergenic | 30.0% |
!! | CTAGTTTGATGGTGTTAAAT+GGG | + | Chr1:28997878-28997897 | MsG0180001900.01.T01:CDS | 30.0% |
!! | GAAAAGTATCGTCAAATTGA+GGG | - | Chr1:28997370-28997389 | None:intergenic | 30.0% |
!! | TCTAGTTTGATGGTGTTAAA+TGG | + | Chr1:28997877-28997896 | MsG0180001900.01.T01:CDS | 30.0% |
!!! | CGGAAGTTTTGAATGAAATT+AGG | - | Chr1:28997183-28997202 | None:intergenic | 30.0% |
!!! | GTTTTAGGTTCATCTATCAA+TGG | + | Chr1:28997398-28997417 | MsG0180001900.01.T01:intron | 30.0% |
AAAATAAGGTCATTCCTCCT+AGG | + | Chr1:28997486-28997505 | MsG0180001900.01.T01:intron | 35.0% | |
ACATGTTACAGATGACTACA+AGG | + | Chr1:28997567-28997586 | MsG0180001900.01.T01:intron | 35.0% | |
ACCACTAATGTGTACTTCAA+TGG | + | Chr1:28997742-28997761 | MsG0180001900.01.T01:CDS | 35.0% | |
ACCCAAAATTGATATGCTGA+CGG | - | Chr1:28997941-28997960 | None:intergenic | 35.0% | |
ACGCTATATATCTCCCAAAA+CGG | - | Chr1:28997667-28997686 | None:intergenic | 35.0% | |
ATACATGACGATCTTGCATT+CGG | + | Chr1:28997078-28997097 | MsG0180001900.01.T01:CDS | 35.0% | |
ATAGCGTAAGAAGTAACTCT+TGG | + | Chr1:28997680-28997699 | MsG0180001900.01.T01:CDS | 35.0% | |
ATCATACGGTGAATGAGATT+TGG | - | Chr1:28997220-28997239 | None:intergenic | 35.0% | |
CCACTAATGTGTACTTCAAT+GGG | + | Chr1:28997743-28997762 | MsG0180001900.01.T01:CDS | 35.0% | |
GACAAAATTAGGTAGACACT+CGG | - | Chr1:28997516-28997535 | None:intergenic | 35.0% | |
GTACCTTACAAGGAAAACTT+TGG | + | Chr1:28998156-28998175 | MsG0180001900.01.T01:CDS | 35.0% | |
GTTTGAGAATGAGGTCAAAT+TGG | + | Chr1:28997337-28997356 | MsG0180001900.01.T01:intron | 35.0% | |
TCTATCGAAGTTGGAAAGAA+GGG | + | Chr1:28998027-28998046 | MsG0180001900.01.T01:CDS | 35.0% | |
TTTAACTACTCAGGTGTTTG+AGG | + | Chr1:28998095-28998114 | MsG0180001900.01.T01:CDS | 35.0% | |
! | AAGGAAAACTTTGGTGCAAT+TGG | + | Chr1:28998165-28998184 | MsG0180001900.01.T01:CDS | 35.0% |
! | TCCGTCAGCATATCAATTTT+GGG | + | Chr1:28997937-28997956 | MsG0180001900.01.T01:CDS | 35.0% |
! | TTTTCACAACAACCGTAGAT+TGG | + | Chr1:28997839-28997858 | MsG0180001900.01.T01:CDS | 35.0% |
!! | AAAGTATCGTCAAATTGAGG+GGG | - | Chr1:28997368-28997387 | None:intergenic | 35.0% |
!! | AAATTGGTGTCAAGGAATCA+TGG | + | Chr1:28997962-28997981 | MsG0180001900.01.T01:CDS | 35.0% |
!!! | AGGAATGACCTTATTTTCTC+CGG | - | Chr1:28997483-28997502 | None:intergenic | 35.0% |
AGATCTAGCATGCCAATCTA+CGG | - | Chr1:28997854-28997873 | None:intergenic | 40.0% | |
AGGAACTGGCATATCAACAA+TGG | - | Chr1:28997713-28997732 | None:intergenic | 40.0% | |
AGGTCAAAGGTTTGAGAATG+AGG | + | Chr1:28997328-28997347 | MsG0180001900.01.T01:intron | 40.0% | |
ATCCTTTGTCTTGTATGGAG+CGG | + | Chr1:28998004-28998023 | MsG0180001900.01.T01:CDS | 40.0% | |
ATGTGTGTTTCCTCTTCATC+TGG | + | Chr1:28997273-28997292 | MsG0180001900.01.T01:CDS | 40.0% | |
CCCATTGAAGTACACATTAG+TGG | - | Chr1:28997746-28997765 | None:intergenic | 40.0% | |
CGCTATATATCTCCCAAAAC+GGG | - | Chr1:28997666-28997685 | None:intergenic | 40.0% | |
GACTTTCATCTTCGAGCATT+TGG | + | Chr1:28997539-28997558 | MsG0180001900.01.T01:intron | 40.0% | |
GTCATTCAATTTGAGCAACG+AGG | + | Chr1:28997813-28997832 | MsG0180001900.01.T01:CDS | 40.0% | |
GTCTATCGAAGTTGGAAAGA+AGG | + | Chr1:28998026-28998045 | MsG0180001900.01.T01:CDS | 40.0% | |
GTGGTATTAGAGATAGGAAC+TGG | - | Chr1:28997727-28997746 | None:intergenic | 40.0% | |
TGTGTGTTTCCTCTTCATCT+GGG | + | Chr1:28997274-28997293 | MsG0180001900.01.T01:CDS | 40.0% | |
TTACCTGCGTTCGTAAATCA+TGG | + | Chr1:28997139-28997158 | MsG0180001900.01.T01:CDS | 40.0% | |
TTGTCTGATCGTACCTTACA+AGG | + | Chr1:28998146-28998165 | MsG0180001900.01.T01:CDS | 40.0% | |
! | AATTGATATGCTGACGGACA+TGG | - | Chr1:28997935-28997954 | None:intergenic | 40.0% |
! | GCACCAAAGTTTTCCTTGTA+AGG | - | Chr1:28998162-28998181 | None:intergenic | 40.0% |
! | GTCCGTCAGCATATCAATTT+TGG | + | Chr1:28997936-28997955 | MsG0180001900.01.T01:CDS | 40.0% |
!! | TTTGGGTGAAATTGGTGTCA+AGG | + | Chr1:28997954-28997973 | MsG0180001900.01.T01:CDS | 40.0% |
ACTTCAATGGGATGTGCCAT+TGG | + | Chr1:28997755-28997774 | MsG0180001900.01.T01:CDS | 45.0% | |
AGACCATGATTTACGAACGC+AGG | - | Chr1:28997145-28997164 | None:intergenic | 45.0% | |
TATATCTCCCAAAACGGGTC+AGG | - | Chr1:28997661-28997680 | None:intergenic | 45.0% | |
TCCTGCTACCGGAGAAAATA+AGG | + | Chr1:28997472-28997491 | MsG0180001900.01.T01:intron | 45.0% | |
! | AATGGGATGTGCCATTGGTT+TGG | + | Chr1:28997760-28997779 | MsG0180001900.01.T01:CDS | 45.0% |
! | TATGACACCTGACCCGTTTT+GGG | + | Chr1:28997651-28997670 | MsG0180001900.01.T01:CDS | 45.0% |
!! | ATGGGATGTGCCATTGGTTT+GGG | + | Chr1:28997761-28997780 | MsG0180001900.01.T01:CDS | 45.0% |
!!! | ACCTTATTTTCTCCGGTAGC+AGG | - | Chr1:28997476-28997495 | None:intergenic | 45.0% |
ATGGAGCGGTCTATCGAAGT+TGG | + | Chr1:28998018-28998037 | MsG0180001900.01.T01:CDS | 50.0% | |
CATCCCAATCCCCAAACCAA+TGG | - | Chr1:28997774-28997793 | None:intergenic | 50.0% | |
GAAACGCAACCCAGATGAAG+AGG | - | Chr1:28997286-28997305 | None:intergenic | 50.0% | |
GACCGCTCCATACAAGACAA+AGG | - | Chr1:28998009-28998028 | None:intergenic | 50.0% | |
GTATCGTCAAATTGAGGGGG+AGG | - | Chr1:28997365-28997384 | None:intergenic | 50.0% | |
! | CAAAACGGGTCAGGTGTCAT+AGG | - | Chr1:28997652-28997671 | None:intergenic | 50.0% |
! | CTATGACACCTGACCCGTTT+TGG | + | Chr1:28997650-28997669 | MsG0180001900.01.T01:CDS | 50.0% |
!! | CATTGGTTTGGGGATTGGGA+TGG | + | Chr1:28997772-28997791 | MsG0180001900.01.T01:CDS | 50.0% |
!! | GCACTTTGGAATCCTGCTAC+CGG | + | Chr1:28997461-28997480 | MsG0180001900.01.T01:intron | 50.0% |
!! | GTGCCATTGGTTTGGGGATT+GGG | + | Chr1:28997768-28997787 | MsG0180001900.01.T01:CDS | 50.0% |
!! | TGGGATGTGCCATTGGTTTG+GGG | + | Chr1:28997762-28997781 | MsG0180001900.01.T01:CDS | 50.0% |
!! | TGTGCCATTGGTTTGGGGAT+TGG | + | Chr1:28997767-28997786 | MsG0180001900.01.T01:CDS | 50.0% |
AGACACTCGGAAAGCCTAGG+AGG | - | Chr1:28997503-28997522 | None:intergenic | 55.0% | |
GGTAGACACTCGGAAAGCCT+AGG | - | Chr1:28997506-28997525 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 28997030 | 28998203 | 28997030 | ID=MsG0180001900.01;Name=MsG0180001900.01 |
Chr1 | mRNA | 28997030 | 28998203 | 28997030 | ID=MsG0180001900.01.T01;Parent=MsG0180001900.01;Name=MsG0180001900.01.T01;_AED=0.30;_eAED=0.32;_QI=0|0|0|1|1|1|2|0|310 |
Chr1 | exon | 28997030 | 28997336 | 28997030 | ID=MsG0180001900.01.T01:exon:18890;Parent=MsG0180001900.01.T01 |
Chr1 | exon | 28997578 | 28998203 | 28997578 | ID=MsG0180001900.01.T01:exon:18891;Parent=MsG0180001900.01.T01 |
Chr1 | CDS | 28997030 | 28997336 | 28997030 | ID=MsG0180001900.01.T01:cds;Parent=MsG0180001900.01.T01 |
Chr1 | CDS | 28997578 | 28998203 | 28997578 | ID=MsG0180001900.01.T01:cds;Parent=MsG0180001900.01.T01 |
Gene Sequence |
Protein sequence |