AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030726.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030726.01.T01 MTR_6g011460 82.831 431 66 3 1 430 1 424 0.0 712
MsG0680030726.01.T01 MTR_4g039440 63.492 441 128 7 1 432 1 417 0.0 520
MsG0680030726.01.T01 MTR_1g085120 64.734 414 131 4 22 429 144 548 0.0 516
MsG0680030726.01.T01 MTR_1g085120 64.663 416 132 4 20 429 67 473 0.0 516
MsG0680030726.01.T01 MTR_7g055943 56.264 439 168 6 1 430 1 424 6.69e-152 438
MsG0680030726.01.T01 MTR_6g022500 58.673 392 154 4 40 428 91 477 1.74e-147 428
MsG0680030726.01.T01 MTR_6g022360 55.324 432 162 7 1 426 1 407 1.75e-141 410
MsG0680030726.01.T01 MTR_1g085120 64.174 321 103 3 20 334 154 468 1.12e-133 393
MsG0680030726.01.T01 MTR_1089s0010 54.593 381 167 4 49 429 7 381 1.06e-126 372
MsG0680030726.01.T01 MTR_1g066830 53.944 393 163 7 44 426 2 386 5.66e-126 370
MsG0680030726.01.T01 MTR_6g022520 61.300 323 114 4 116 432 1 318 9.05e-121 354
MsG0680030726.01.T01 MTR_5g058100 53.093 388 166 8 49 429 8 386 1.15e-117 349
MsG0680030726.01.T01 MTR_5g058000 53.927 382 158 7 49 426 7 374 2.92e-116 345
MsG0680030726.01.T01 MTR_5g073420 48.969 388 181 9 49 432 10 384 2.34e-113 338
MsG0680030726.01.T01 MTR_6g040270 51.571 382 169 6 52 427 10 381 2.54e-110 330
MsG0680030726.01.T01 MTR_6g044572 47.017 419 165 8 49 434 1 395 2.30e-102 310
MsG0680030726.01.T01 MTR_6g044560 47.017 419 165 8 49 434 177 571 9.88e-100 309
MsG0680030726.01.T01 MTR_1g108820 42.640 394 193 12 49 425 7 384 1.11e-80 254
MsG0680030726.01.T01 MTR_7g026500 39.850 399 200 11 50 426 14 394 3.72e-78 248
MsG0680030726.01.T01 MTR_5g061680 44.937 316 138 9 49 359 10 294 3.91e-74 235
MsG0680030726.01.T01 MTR_0009s0080 39.678 373 214 5 52 416 20 389 1.18e-73 237
MsG0680030726.01.T01 MTR_6g045333 39.949 393 214 10 49 426 60 445 2.56e-71 232
MsG0680030726.01.T01 MTR_3g095600 40.909 374 133 10 49 418 3 292 2.96e-69 221
MsG0680030726.01.T01 MTR_5g007410 37.632 380 218 8 52 419 28 400 2.59e-68 224
MsG0680030726.01.T01 MTR_5g073370 39.196 398 204 16 50 429 5 382 3.23e-65 214
MsG0680030726.01.T01 MTR_5g045170 37.940 398 219 13 42 425 6 389 3.18e-64 212
MsG0680030726.01.T01 MTR_3g071850 38.243 387 223 8 49 423 23 405 3.92e-64 221
MsG0680030726.01.T01 MTR_5g045510 36.198 384 214 8 49 425 11 370 1.58e-61 204
MsG0680030726.01.T01 MTR_1g108820 41.584 303 149 9 49 334 7 298 2.39e-57 192
MsG0680030726.01.T01 MTR_5g076150 49.558 226 91 5 152 356 4 227 5.24e-57 188
MsG0680030726.01.T01 MTR_1g108800 39.535 387 171 11 49 425 7 340 4.58e-56 189
MsG0680030726.01.T01 MTR_5g039490 35.075 402 226 9 32 426 2 375 2.28e-55 188
MsG0680030726.01.T01 MTR_2g036470 35.264 397 234 10 42 424 6 393 6.76e-55 187
MsG0680030726.01.T01 MTR_5g039450 33.846 390 205 10 49 424 5 355 3.84e-54 184
MsG0680030726.01.T01 MTR_5g039470 36.310 336 191 8 66 387 1 327 7.48e-54 182
MsG0680030726.01.T01 MTR_7g098510 35.309 405 236 11 34 427 2 391 5.55e-51 177
MsG0680030726.01.T01 MTR_2g007450 33.729 421 218 11 49 425 15 418 1.08e-49 174
MsG0680030726.01.T01 MTR_7g056433 35.264 397 219 14 50 427 12 389 1.15e-49 173
MsG0680030726.01.T01 MTR_3g107100 34.568 405 230 12 50 430 11 404 6.18e-47 166
MsG0680030726.01.T01 MTR_1g041245 34.663 401 216 17 49 427 10 386 9.82e-47 166
MsG0680030726.01.T01 MTR_5g031970 32.558 387 216 9 42 424 8 353 1.27e-46 164
MsG0680030726.01.T01 MTR_3g023630 34.565 379 222 12 49 416 7 370 1.85e-46 164
MsG0680030726.01.T01 MTR_5g033200 54.971 171 66 4 251 418 11 173 7.88e-46 157
MsG0680030726.01.T01 MTR_7g098570 35.128 390 229 11 49 428 19 394 7.89e-46 165
MsG0680030726.01.T01 MTR_7g056287 34.961 389 223 12 50 427 3 372 2.59e-45 161
MsG0680030726.01.T01 MTR_0492s0020 35.475 358 195 10 50 394 86 420 4.31e-45 162
MsG0680030726.01.T01 MTR_0543s0010 35.014 357 198 9 50 394 86 420 7.46e-45 162
MsG0680030726.01.T01 MTR_7g075820 32.266 406 226 15 50 425 6 392 4.94e-44 158
MsG0680030726.01.T01 MTR_3g087260 32.680 459 213 17 50 426 12 456 1.18e-43 159
MsG0680030726.01.T01 MTR_7g056277 35.128 390 221 13 50 427 259 628 1.34e-43 162
MsG0680030726.01.T01 MTR_2g007400 32.048 415 228 16 45 425 7 401 1.59e-43 157
MsG0680030726.01.T01 MTR_3g095630 48.663 187 88 4 241 426 6 185 1.82e-43 151
MsG0680030726.01.T01 MTR_5g073340 35.385 325 166 9 49 360 7 300 2.00e-43 154
MsG0680030726.01.T01 MTR_3g108560 33.838 396 216 15 50 426 20 388 4.74e-43 155
MsG0680030726.01.T01 MTR_3g107160 31.281 406 231 11 41 424 1 380 4.79e-43 155
MsG0680030726.01.T01 MTR_7g115270 33.252 412 214 16 50 424 12 399 3.61e-42 154
MsG0680030726.01.T01 MTR_7g098480 35.556 405 231 15 34 426 2 388 7.93e-42 154
MsG0680030726.01.T01 MTR_5g065100 33.938 386 191 13 55 426 13 348 3.24e-41 152
MsG0680030726.01.T01 MTR_5g063950 32.891 377 216 9 55 424 13 359 8.90e-41 149
MsG0680030726.01.T01 MTR_7g114710 31.750 400 205 15 49 427 12 364 6.51e-40 147
MsG0680030726.01.T01 MTR_3g036250 31.888 392 219 13 49 424 4 363 7.28e-40 146
MsG0680030726.01.T01 MTR_7g088260 30.283 459 265 15 2 427 26 462 1.22e-39 148
MsG0680030726.01.T01 MTR_3g095640 49.390 164 76 4 44 200 12 175 1.33e-39 140
MsG0680030726.01.T01 MTR_3g108150 32.990 388 235 11 50 426 13 386 2.59e-39 145
MsG0680030726.01.T01 MTR_5g058350 50.000 188 67 2 48 235 6 166 3.64e-39 139
MsG0680030726.01.T01 MTR_3g105060 32.170 401 210 12 49 427 13 373 4.78e-39 144
MsG0680030726.01.T01 MTR_7g007080 30.424 401 227 13 50 425 4 377 3.69e-38 142
MsG0680030726.01.T01 MTR_3g107120 32.250 400 226 12 50 424 9 388 3.89e-38 142
MsG0680030726.01.T01 MTR_5g008920 32.143 392 236 14 49 429 11 383 3.98e-38 142
MsG0680030726.01.T01 MTR_6g022390 55.639 133 49 3 48 172 3 133 4.60e-38 135
MsG0680030726.01.T01 MTR_3g040700 32.286 350 197 11 49 383 42 366 4.75e-38 143
MsG0680030726.01.T01 MTR_1377s0010 53.521 142 62 2 261 402 1 138 1.29e-37 134
MsG0680030726.01.T01 MTR_5g083890 32.250 400 218 13 50 413 6 388 1.96e-37 143
MsG0680030726.01.T01 MTR_3g099830 31.343 402 211 13 49 425 11 372 3.06e-36 137
MsG0680030726.01.T01 MTR_7g032380 31.990 397 202 16 49 427 10 356 4.53e-36 136
MsG0680030726.01.T01 MTR_7g033915 31.552 393 216 13 49 426 10 364 5.93e-36 136
MsG0680030726.01.T01 MTR_3g467400 31.358 405 215 12 48 427 1 367 1.67e-35 135
MsG0680030726.01.T01 MTR_7g033990 32.361 377 219 12 49 406 10 369 1.78e-35 136
MsG0680030726.01.T01 MTR_7g032370 32.632 380 205 15 66 427 6 352 2.03e-35 134
MsG0680030726.01.T01 MTR_3g082890 31.863 408 228 15 50 427 97 484 3.44e-35 136
MsG0680030726.01.T01 MTR_7g034115 32.055 365 211 14 48 394 9 354 4.98e-35 134
MsG0680030726.01.T01 MTR_2g008310 30.075 399 237 11 49 426 1 378 5.33e-35 134
MsG0680030726.01.T01 MTR_7g083740 29.668 391 222 10 49 426 16 366 8.50e-35 133
MsG0680030726.01.T01 MTR_4g098590 31.680 363 216 10 52 391 1 354 1.96e-34 132
MsG0680030726.01.T01 MTR_5g054920 41.667 180 92 5 222 394 7 180 2.02e-34 127
MsG0680030726.01.T01 MTR_2g005990 30.807 409 231 12 49 425 5 393 4.00e-34 132
MsG0680030726.01.T01 MTR_1g053025 30.769 403 235 15 49 424 1 386 1.84e-33 130
MsG0680030726.01.T01 MTR_2g007360 29.064 406 215 14 49 425 11 372 3.04e-33 129
MsG0680030726.01.T01 MTR_1g107385 31.002 429 238 17 36 425 12 421 5.72e-33 129
MsG0680030726.01.T01 MTR_2g008320 31.608 367 209 12 49 391 51 399 9.74e-33 129
MsG0680030726.01.T01 MTR_1g059860 32.353 306 164 10 118 383 8 310 1.39e-32 126
MsG0680030726.01.T01 MTR_5g008950 28.571 392 241 12 52 429 1 367 1.86e-32 127
MsG0680030726.01.T01 MTR_3g082890 29.333 450 221 15 50 427 17 441 1.23e-31 125
MsG0680030726.01.T01 MTR_3g108560 34.448 299 161 12 50 334 20 297 1.37e-31 123
MsG0680030726.01.T01 MTR_7g056430 30.874 366 193 13 50 394 9 335 1.22e-30 125
MsG0680030726.01.T01 MTR_7g056420 30.874 366 193 13 50 394 9 335 1.25e-30 125
MsG0680030726.01.T01 MTR_7g060470 31.358 405 220 13 50 415 3 388 4.03e-30 120
MsG0680030726.01.T01 MTR_2g007500 31.988 347 188 11 49 371 13 335 9.80e-30 118
MsG0680030726.01.T01 MTR_3g026920 29.847 392 200 13 48 391 17 381 1.67e-29 119
MsG0680030726.01.T01 MTR_7g007340 32.320 362 182 13 49 391 12 329 1.03e-28 116
MsG0680030726.01.T01 MTR_7g056020 29.888 358 209 9 50 394 16 344 3.02e-28 117
MsG0680030726.01.T01 MTR_7g034120 32.515 326 185 14 120 429 4 310 5.22e-28 113
MsG0680030726.01.T01 MTR_6g033095 38.739 222 77 5 182 403 32 194 3.12e-27 108
MsG0680030726.01.T01 MTR_7g021950 28.010 407 259 11 45 434 43 432 4.98e-27 113
MsG0680030726.01.T01 MTR_6g022410 58.511 94 36 1 334 427 17 107 1.01e-26 103
MsG0680030726.01.T01 MTR_7g021990 27.833 406 259 11 45 433 43 431 2.62e-26 110
MsG0680030726.01.T01 MTR_3g109982 32.824 262 158 8 166 415 215 470 8.41e-25 107
MsG0680030726.01.T01 MTR_3g109982 40.107 187 101 4 50 233 13 191 9.48e-24 104
MsG0680030726.01.T01 MTR_5g061410 29.655 290 162 7 55 334 10 267 9.88e-25 103
MsG0680030726.01.T01 MTR_7g022105 29.333 375 240 10 45 405 44 407 1.43e-24 105
MsG0680030726.01.T01 MTR_4g080610 28.753 393 212 13 52 426 14 356 1.47e-24 104
MsG0680030726.01.T01 MTR_5g012840 26.902 368 193 12 74 427 13 318 2.75e-24 102
MsG0680030726.01.T01 MTR_3g071790 33.514 185 113 3 210 385 19 202 3.52e-24 99.8
MsG0680030726.01.T01 MTR_7g056447 39.683 189 103 6 45 229 4 185 4.38e-24 102
MsG0680030726.01.T01 MTR_8g085430 35.354 198 116 5 46 234 7 201 8.54e-24 101
MsG0680030726.01.T01 MTR_3g110010 40.541 185 99 4 50 231 13 189 1.18e-23 104
MsG0680030726.01.T01 MTR_3g110010 34.946 186 109 6 166 345 215 394 1.89e-15 79.3
MsG0680030726.01.T01 MTR_0571s0010 59.756 82 32 1 50 131 32 112 1.73e-23 95.1
MsG0680030726.01.T01 MTR_7g007370 30.026 383 189 14 49 415 16 335 9.41e-23 99.0
MsG0680030726.01.T01 MTR_7g034110 28.402 338 192 11 49 382 10 301 1.57e-22 98.6
MsG0680030726.01.T01 MTR_8g467800 25.885 452 261 16 43 429 13 455 1.01e-21 97.4
MsG0680030726.01.T01 MTR_5g092960 26.931 479 243 21 34 427 6 462 3.12e-20 93.2
MsG0680030726.01.T01 MTR_8g062270 26.940 464 235 20 44 426 13 453 4.17e-20 92.8
MsG0680030726.01.T01 MTR_5g013500 29.268 369 196 16 88 427 33 365 5.11e-20 91.3
MsG0680030726.01.T01 MTR_5g024060 43.411 129 64 3 293 419 79 200 6.42e-20 89.4
MsG0680030726.01.T01 MTR_7g075800 27.543 403 213 18 50 390 9 394 1.03e-19 92.4
MsG0680030726.01.T01 MTR_8g077460 26.683 401 236 14 50 427 10 375 1.33e-19 90.5
MsG0680030726.01.T01 MTR_4g134150 34.574 188 108 6 50 234 14 189 7.63e-19 85.5
MsG0680030726.01.T01 MTR_3g114200 39.860 143 76 4 50 188 19 155 1.34e-18 82.8
MsG0680030726.01.T01 MTR_8g469020 27.015 459 240 18 50 427 7 451 4.43e-18 86.7
MsG0680030726.01.T01 MTR_7g034090 32.258 248 112 8 50 245 4 247 5.44e-18 85.9
MsG0680030726.01.T01 MTR_8g468840 26.492 419 223 15 48 391 12 420 6.16e-18 85.9
MsG0680030726.01.T01 MTR_4g032730 25.316 474 254 18 42 427 6 467 5.88e-17 83.2
MsG0680030726.01.T01 MTR_8g468810 26.022 465 267 16 32 427 7 463 6.22e-17 83.2
MsG0680030726.01.T01 MTR_2g007550 26.703 367 179 10 49 392 13 312 1.44e-16 80.9
MsG0680030726.01.T01 MTR_8g445780 25.858 379 208 12 50 368 13 378 1.84e-16 81.3
MsG0680030726.01.T01 MTR_8g467790 34.762 210 107 11 49 238 147 346 1.93e-16 81.6
MsG0680030726.01.T01 MTR_8g062310 26.573 429 249 19 45 427 20 428 1.12e-15 79.0
MsG0680030726.01.T01 MTR_4g130200 24.198 405 238 12 43 414 13 381 2.39e-15 77.8
MsG0680030726.01.T01 MTR_8g467800 29.717 212 138 5 43 245 13 222 2.57e-15 77.4
MsG0680030726.01.T01 MTR_8g070950 32.995 197 111 8 50 235 15 201 4.04e-15 77.4
MsG0680030726.01.T01 MTR_7g033945 34.118 170 95 6 49 208 10 172 4.74e-15 73.6
MsG0680030726.01.T01 MTR_4g056030 24.672 458 242 17 50 418 9 452 6.41e-15 77.0
MsG0680030726.01.T01 MTR_3g107140 33.684 190 107 5 67 242 9 193 7.15e-15 73.6
MsG0680030726.01.T01 MTR_8g014260 23.769 467 236 16 50 427 16 451 1.44e-14 75.9
MsG0680030726.01.T01 MTR_5g040850 24.368 435 248 16 50 427 7 417 2.22e-14 75.1
MsG0680030726.01.T01 MTR_7g098590 48.810 84 39 2 49 132 17 96 2.36e-14 70.1
MsG0680030726.01.T01 MTR_5g084070 27.805 410 218 19 49 400 12 401 7.03e-14 73.6
MsG0680030726.01.T01 MTR_1g090883 31.222 221 127 7 50 254 19 230 7.47e-14 73.2
MsG0680030726.01.T01 MTR_5g073400 38.938 113 63 3 122 232 3 111 7.77e-14 68.9
MsG0680030726.01.T01 MTR_8g468760 26.744 430 250 21 46 426 5 418 7.96e-14 73.2
MsG0680030726.01.T01 MTR_8g468810 31.481 216 133 7 32 235 7 219 1.44e-13 71.6
MsG0680030726.01.T01 MTR_8g468810 31.481 216 133 7 32 235 7 219 1.56e-13 71.6
MsG0680030726.01.T01 MTR_5g092960 30.769 273 147 13 34 278 6 264 1.58e-13 72.4
MsG0680030726.01.T01 MTR_8g468810 31.481 216 133 7 32 235 7 219 1.64e-13 72.0
MsG0680030726.01.T01 MTR_7g023310 28.251 223 146 6 39 256 15 228 2.35e-13 72.0
MsG0680030726.01.T01 MTR_2g047872 23.026 456 265 18 32 427 7 436 2.95e-13 71.6
MsG0680030726.01.T01 MTR_8g468810 31.481 216 133 7 32 235 7 219 3.15e-13 71.2
MsG0680030726.01.T01 MTR_2g083840 31.980 197 118 7 50 233 21 214 4.39e-13 71.2
MsG0680030726.01.T01 MTR_5g021550 35.714 140 76 5 50 180 19 153 5.93e-13 67.0
MsG0680030726.01.T01 MTR_7g056280 29.834 181 115 6 52 225 8 183 8.65e-13 70.5
MsG0680030726.01.T01 MTR_7g056280 28.125 224 133 8 222 431 368 577 4.11e-11 65.5
MsG0680030726.01.T01 MTR_1g038710 26.812 414 226 17 50 391 19 427 1.10e-12 70.1
MsG0680030726.01.T01 MTR_2g020180 29.185 233 117 9 219 427 7 215 1.54e-12 67.0
MsG0680030726.01.T01 MTR_8g058965 30.045 223 132 9 44 244 7 227 1.66e-12 69.3
MsG0680030726.01.T01 MTR_1g090900 32.768 177 99 7 50 217 11 176 1.71e-12 66.6
MsG0680030726.01.T01 MTR_2g007090 30.142 282 150 10 161 426 43 293 2.10e-12 67.8
MsG0680030726.01.T01 MTR_5g039950 22.759 435 260 13 43 431 16 420 2.95e-12 68.6
MsG0680030726.01.T01 MTR_1g016340 28.972 214 134 7 50 249 15 224 3.62e-12 68.2
MsG0680030726.01.T01 MTR_1g016340 28.972 214 134 7 50 249 20 229 3.67e-12 68.2
MsG0680030726.01.T01 MTR_4g050250 30.802 237 135 10 34 244 6 239 4.09e-12 68.2
MsG0680030726.01.T01 MTR_8g014290 32.877 146 78 4 50 180 10 150 4.74e-12 64.3
MsG0680030726.01.T01 MTR_7g033940 41.379 87 47 1 47 133 91 173 1.53e-11 64.3
MsG0680030726.01.T01 MTR_2g020170 35.246 122 73 4 50 170 22 138 1.56e-11 62.4
MsG0680030726.01.T01 MTR_7g021930 33.333 186 111 5 50 233 10 184 2.05e-11 65.5
MsG0680030726.01.T01 MTR_7g021970 33.333 186 111 5 50 233 10 184 2.05e-11 65.5
MsG0680030726.01.T01 MTR_4g056020 26.634 413 222 17 50 391 9 411 2.17e-11 65.9
MsG0680030726.01.T01 MTR_7g022060 33.333 186 111 5 50 233 10 184 2.19e-11 65.1
MsG0680030726.01.T01 MTR_1g095750 42.857 84 46 1 49 132 45 126 2.75e-11 61.6
MsG0680030726.01.T01 MTR_1g021825 22.738 409 256 14 50 409 17 414 3.23e-11 65.5
MsG0680030726.01.T01 MTR_4g093690 28.934 197 110 8 50 230 18 200 4.19e-11 63.9
MsG0680030726.01.T01 MTR_1g021825 22.738 409 256 14 50 409 88 485 5.00e-11 65.1
MsG0680030726.01.T01 MTR_8g062010 31.937 191 111 7 50 229 9 191 5.14e-11 64.7
MsG0680030726.01.T01 MTR_2g047858 28.571 203 127 8 50 241 115 310 5.54e-11 64.7
MsG0680030726.01.T01 MTR_5g080710 26.906 446 256 15 31 419 14 446 8.66e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030726.01.T01 AT4G00160 29.638 442 242 15 50 432 16 447 3.26e-28 116
MsG0680030726.01.T01 AT5G56420 29.099 433 236 17 50 427 6 422 1.03e-22 100
MsG0680030726.01.T01 AT5G56420 29.099 433 236 17 50 427 6 422 1.03e-22 100
MsG0680030726.01.T01 AT5G56420 29.099 433 236 17 50 427 6 422 1.03e-22 100
MsG0680030726.01.T01 AT4G26340 26.744 430 222 16 49 408 1 407 7.67e-22 97.4
MsG0680030726.01.T01 AT5G56440 25.885 452 238 18 49 426 1 429 1.05e-21 97.1
MsG0680030726.01.T01 AT1G55030 27.189 434 241 16 31 409 4 417 3.13e-21 95.9
MsG0680030726.01.T01 AT5G41840 34.615 234 118 9 50 258 14 237 5.37e-21 95.9
MsG0680030726.01.T01 AT5G56820 26.712 438 265 13 41 432 6 433 5.61e-21 95.1
MsG0680030726.01.T01 AT1G55030 27.358 424 236 15 41 409 1 407 1.41e-20 94.0
MsG0680030726.01.T01 AT3G59200 25.895 475 232 17 50 424 7 461 2.13e-20 94.0
MsG0680030726.01.T01 AT4G27050 26.566 463 240 19 50 426 4 452 2.47e-20 93.2
MsG0680030726.01.T01 AT4G27050 26.566 463 240 19 50 426 4 452 2.47e-20 93.2
MsG0680030726.01.T01 AT4G27050 26.566 463 240 19 50 426 4 452 2.47e-20 93.2
MsG0680030726.01.T01 AT4G27050 26.566 463 240 19 50 426 4 452 2.47e-20 93.2
MsG0680030726.01.T01 AT4G27050 26.566 463 240 19 50 426 4 452 2.47e-20 93.2
MsG0680030726.01.T01 AT5G44940 27.157 394 244 17 50 424 5 374 4.14e-20 92.0
MsG0680030726.01.T01 AT1G06630 26.866 402 214 16 50 387 21 406 7.77e-20 91.7
MsG0680030726.01.T01 AT1G06630 26.866 402 214 16 50 387 12 397 8.41e-20 91.3
MsG0680030726.01.T01 AT1G06630 26.866 402 214 16 50 387 12 397 8.41e-20 91.3
MsG0680030726.01.T01 AT1G06630 26.866 402 214 16 50 387 12 397 8.41e-20 91.3
MsG0680030726.01.T01 AT1G06630 26.866 402 214 16 50 387 12 397 8.41e-20 91.3
MsG0680030726.01.T01 AT3G60040 25.111 450 250 15 50 427 13 447 9.63e-20 92.4
MsG0680030726.01.T01 AT4G10400 27.465 426 243 13 49 426 1 408 1.04e-19 91.3
MsG0680030726.01.T01 AT4G10400 27.465 426 243 13 49 426 1 408 1.04e-19 91.3
MsG0680030726.01.T01 AT4G10400 27.465 426 243 13 49 426 1 408 1.04e-19 91.3
MsG0680030726.01.T01 AT1G06630 28.448 348 178 14 50 333 12 352 1.10e-19 90.5
MsG0680030726.01.T01 AT1G06630 28.448 348 178 14 50 333 12 352 1.10e-19 90.5
MsG0680030726.01.T01 AT1G66290 27.935 247 155 6 33 267 12 247 1.18e-19 91.3
MsG0680030726.01.T01 AT5G38590 29.073 399 211 15 49 391 1 383 1.20e-19 90.9
MsG0680030726.01.T01 AT3G52680 27.416 445 248 17 50 433 21 451 1.42e-19 91.3
MsG0680030726.01.T01 AT3G60040 25.111 450 250 15 50 427 232 666 1.56e-19 92.0
MsG0680030726.01.T01 AT3G60040 25.111 450 250 15 50 427 233 667 1.58e-19 92.0
MsG0680030726.01.T01 AT5G53640 30.583 206 128 6 33 233 3 198 1.65e-19 87.4
MsG0680030726.01.T01 AT3G60040 25.111 450 250 15 50 427 230 664 1.66e-19 91.7
MsG0680030726.01.T01 AT3G60040 25.111 450 250 15 50 427 232 666 1.67e-19 91.7
MsG0680030726.01.T01 AT3G59200 35.468 203 114 7 50 242 7 202 1.81e-19 89.7
MsG0680030726.01.T01 AT5G22700 31.718 227 139 6 43 263 36 252 2.68e-19 90.1
MsG0680030726.01.T01 AT5G22700 31.718 227 139 6 43 263 36 252 2.90e-19 90.1
MsG0680030726.01.T01 AT1G06630 28.448 348 178 14 50 333 12 352 3.60e-19 90.1
MsG0680030726.01.T01 AT5G22670 34.043 188 111 6 50 233 11 189 4.51e-19 89.4
MsG0680030726.01.T01 AT3G50710 26.292 445 238 14 49 424 1 424 7.41e-19 88.6
MsG0680030726.01.T01 AT5G22700 31.696 224 137 6 46 263 2 215 9.20e-19 88.6
MsG0680030726.01.T01 AT5G22700 31.696 224 137 6 46 263 2 215 9.20e-19 88.6
MsG0680030726.01.T01 AT5G22700 31.696 224 137 6 46 263 2 215 9.20e-19 88.6
MsG0680030726.01.T01 AT5G22700 31.696 224 137 6 46 263 2 215 9.20e-19 88.6
MsG0680030726.01.T01 AT5G62970 26.039 457 250 18 49 426 1 448 1.13e-18 88.2
MsG0680030726.01.T01 AT4G14103 33.636 220 126 8 50 260 8 216 1.40e-18 87.4
MsG0680030726.01.T01 AT4G14103 33.636 220 126 8 50 260 8 216 1.40e-18 87.4
MsG0680030726.01.T01 AT5G25850 33.854 192 110 5 48 234 18 197 1.43e-18 88.2
MsG0680030726.01.T01 AT4G14103 33.636 220 126 8 50 260 8 216 1.68e-18 87.8
MsG0680030726.01.T01 AT5G53840 23.733 434 258 16 50 424 18 437 1.72e-18 87.8
MsG0680030726.01.T01 AT4G00320 32.218 239 122 9 44 256 9 233 1.76e-18 88.2
MsG0680030726.01.T01 AT1G06630 32.889 225 129 8 50 262 12 226 2.34e-18 85.9
MsG0680030726.01.T01 AT3G58860 25.546 458 242 20 49 426 6 444 2.35e-18 87.4
MsG0680030726.01.T01 AT5G53635 34.409 186 112 4 52 233 2 181 3.07e-18 87.0
MsG0680030726.01.T01 AT2G42720 31.765 255 155 10 49 292 1 247 6.64e-18 85.9
MsG0680030726.01.T01 AT3G42770 36.126 191 107 6 55 233 4 191 8.88e-18 85.9
MsG0680030726.01.T01 AT5G41830 31.739 230 125 8 50 256 13 233 1.84e-17 85.1
MsG0680030726.01.T01 AT5G22610 26.250 400 229 13 50 394 18 406 1.86e-17 84.7
MsG0680030726.01.T01 AT5G56400 27.314 443 239 17 49 427 32 455 2.43e-17 84.3
MsG0680030726.01.T01 AT4G22280 26.536 407 210 15 49 391 1 382 2.61e-17 84.0
MsG0680030726.01.T01 AT5G56380 25.110 454 248 18 49 426 1 438 2.84e-17 84.0
MsG0680030726.01.T01 AT5G56380 25.110 454 248 18 49 426 1 438 2.84e-17 84.0
MsG0680030726.01.T01 AT2G04230 26.096 456 260 19 38 427 2 446 2.99e-17 84.0
MsG0680030726.01.T01 AT5G56690 32.143 196 111 5 52 234 4 190 4.46e-17 83.2
MsG0680030726.01.T01 AT1G48400 33.503 197 109 8 50 233 10 197 5.76e-17 83.2
MsG0680030726.01.T01 AT5G38590 34.021 194 107 6 49 233 1 182 6.10e-17 81.3
MsG0680030726.01.T01 AT5G38570 27.273 407 243 14 49 430 1 379 6.13e-17 82.4
MsG0680030726.01.T01 AT1G48400 33.503 197 109 8 50 233 10 197 6.38e-17 83.2
MsG0680030726.01.T01 AT4G15060 32.124 193 119 4 49 234 25 212 1.16e-16 82.0
MsG0680030726.01.T01 AT5G56560 25.290 431 250 16 51 427 6 418 1.32e-16 82.0
MsG0680030726.01.T01 AT1G32375 24.312 436 259 11 49 427 1 422 1.50e-16 81.6
MsG0680030726.01.T01 AT1G32375 24.312 436 259 11 49 427 1 422 1.50e-16 81.6
MsG0680030726.01.T01 AT4G15060 32.124 193 119 4 49 234 171 358 1.54e-16 82.0
MsG0680030726.01.T01 AT1G78750 22.863 468 268 13 35 424 3 455 1.90e-16 81.6
MsG0680030726.01.T01 AT1G78750 22.863 468 268 13 35 424 3 455 1.90e-16 81.6
MsG0680030726.01.T01 AT3G58920 23.444 482 254 13 49 428 1 469 1.93e-16 81.6
MsG0680030726.01.T01 AT4G22280 28.324 346 172 13 49 333 1 331 2.60e-16 80.1
MsG0680030726.01.T01 AT5G22660 31.651 218 125 8 50 257 13 216 2.78e-16 79.7
MsG0680030726.01.T01 AT2G29930 33.163 196 110 6 50 237 12 194 3.25e-16 80.9
MsG0680030726.01.T01 AT2G29930 33.163 196 110 6 50 237 12 194 3.25e-16 80.9
MsG0680030726.01.T01 AT5G56370 25.231 432 257 12 49 426 1 420 3.65e-16 80.5
MsG0680030726.01.T01 AT5G56370 25.231 432 257 12 49 426 1 420 3.65e-16 80.5
MsG0680030726.01.T01 AT3G49150 32.579 221 123 10 50 256 16 224 5.59e-16 80.1
MsG0680030726.01.T01 AT5G22610 25.058 431 225 16 50 394 18 436 6.33e-16 80.1
MsG0680030726.01.T01 AT5G22720 32.979 188 113 5 50 231 23 203 6.91e-16 80.1
MsG0680030726.01.T01 AT5G41630 32.906 234 115 11 50 256 12 230 1.17e-15 79.3
MsG0680030726.01.T01 AT5G22660 32.110 218 124 8 50 257 13 216 1.21e-15 79.0
MsG0680030726.01.T01 AT1G58310 30.928 291 153 12 50 306 8 284 1.33e-15 79.3
MsG0680030726.01.T01 AT4G13965 26.777 422 240 17 49 414 9 417 1.59e-15 78.6
MsG0680030726.01.T01 AT3G49030 25.764 458 252 17 38 426 2 440 1.81e-15 78.6
MsG0680030726.01.T01 AT3G59230 25.466 483 230 24 50 424 12 472 3.15e-15 78.2
MsG0680030726.01.T01 AT5G60610 31.980 197 106 5 49 234 1 180 3.16e-15 77.4
MsG0680030726.01.T01 AT5G60610 31.980 197 106 5 49 234 1 180 3.16e-15 77.4
MsG0680030726.01.T01 AT4G09920 34.211 190 114 4 49 233 1 184 3.27e-15 76.3
MsG0680030726.01.T01 AT4G09920 34.211 190 114 4 49 233 1 184 3.27e-15 76.3
MsG0680030726.01.T01 AT4G09920 34.211 190 114 4 49 233 1 184 3.27e-15 76.3
MsG0680030726.01.T01 AT5G56370 26.769 325 183 9 49 330 1 313 3.28e-15 76.6
MsG0680030726.01.T01 AT1G69630 32.308 195 121 4 45 234 13 201 3.88e-15 77.4
MsG0680030726.01.T01 AT4G09920 34.211 190 114 4 49 233 1 184 3.90e-15 76.3
MsG0680030726.01.T01 AT4G09920 34.211 190 114 4 49 233 1 184 3.90e-15 76.3
MsG0680030726.01.T01 AT3G58880 33.333 204 114 8 48 237 1 196 5.78e-15 77.0
MsG0680030726.01.T01 AT4G14096 32.727 220 122 9 50 258 8 212 6.38e-15 77.0
MsG0680030726.01.T01 AT4G14096 32.727 220 122 9 50 258 8 212 6.38e-15 77.0
MsG0680030726.01.T01 AT3G26922 35.122 205 115 8 42 239 7 200 8.20e-15 75.5
MsG0680030726.01.T01 AT3G26922 35.122 205 115 8 42 239 7 200 8.20e-15 75.5
MsG0680030726.01.T01 AT4G13960 31.579 209 118 9 49 243 1 198 1.01e-14 76.3
MsG0680030726.01.T01 AT4G13960 31.579 209 118 9 49 243 1 198 1.01e-14 76.3
MsG0680030726.01.T01 AT1G66320 26.961 204 145 2 29 232 9 208 1.11e-14 76.3
MsG0680030726.01.T01 AT2G26030 31.443 194 105 6 50 230 4 182 1.55e-14 75.9
MsG0680030726.01.T01 AT2G26030 31.443 194 105 6 50 230 4 182 1.60e-14 75.5
MsG0680030726.01.T01 AT2G26030 31.443 194 105 6 50 230 4 182 1.60e-14 75.5
MsG0680030726.01.T01 AT3G03040 24.658 438 219 14 49 391 1 422 1.67e-14 75.9
MsG0680030726.01.T01 AT1G64540 32.292 192 98 7 52 233 7 176 1.83e-14 75.5
MsG0680030726.01.T01 AT1G64540 32.292 192 98 7 52 233 7 176 1.83e-14 75.5
MsG0680030726.01.T01 AT3G59190 32.663 199 108 8 50 231 12 201 2.05e-14 75.1
MsG0680030726.01.T01 AT5G35995 25.745 470 236 22 50 426 5 454 2.23e-14 75.1
MsG0680030726.01.T01 AT5G35995 25.745 470 236 22 50 426 5 454 2.23e-14 75.1
MsG0680030726.01.T01 AT5G44490 30.151 199 110 6 50 233 17 201 2.37e-14 75.1
MsG0680030726.01.T01 AT5G44490 30.151 199 110 6 50 233 17 201 3.16e-14 74.7
MsG0680030726.01.T01 AT3G59190 32.663 199 108 8 50 231 12 201 3.32e-14 75.1
MsG0680030726.01.T01 AT3G49030 26.067 445 241 17 38 426 2 414 3.54e-14 74.3
MsG0680030726.01.T01 AT5G38392 32.195 205 106 8 49 231 1 194 3.72e-14 72.0
MsG0680030726.01.T01 AT5G38390 29.310 232 137 7 49 268 1 217 4.43e-14 74.3
MsG0680030726.01.T01 AT1G16930 23.799 458 240 18 50 424 15 446 5.83e-14 73.9
MsG0680030726.01.T01 AT1G16930 23.799 458 240 18 50 424 15 446 5.83e-14 73.9
MsG0680030726.01.T01 AT1G16930 23.799 458 240 18 50 424 15 446 5.83e-14 73.9
MsG0680030726.01.T01 AT3G59000 32.778 180 99 6 49 212 1 174 9.29e-14 73.6
MsG0680030726.01.T01 AT1G55660 31.818 198 120 5 46 234 49 240 9.38e-14 72.8
MsG0680030726.01.T01 AT5G38386 24.051 395 218 15 49 392 1 364 9.49e-14 73.2
MsG0680030726.01.T01 AT5G38386 24.051 395 218 15 49 392 1 364 9.49e-14 73.2
MsG0680030726.01.T01 AT1G78760 23.146 445 252 16 50 424 16 440 1.09e-13 73.2
MsG0680030726.01.T01 AT1G66310 23.585 424 245 16 36 393 5 415 1.35e-13 72.8
MsG0680030726.01.T01 AT1G55660 31.980 197 119 5 47 234 50 240 1.40e-13 72.8
MsG0680030726.01.T01 AT3G52680 33.161 193 110 5 50 233 21 203 1.58e-13 72.0
MsG0680030726.01.T01 AT1G52650 23.555 467 253 19 49 426 1 452 1.70e-13 72.4
MsG0680030726.01.T01 AT3G49020 26.281 449 267 14 36 429 8 447 1.73e-13 72.4
MsG0680030726.01.T01 AT4G13985 28.788 198 132 4 49 238 18 214 1.88e-13 72.4
MsG0680030726.01.T01 AT3G58900 26.077 441 210 19 49 391 1 423 2.01e-13 72.4
MsG0680030726.01.T01 AT5G27750 33.333 195 111 7 50 231 5 193 2.15e-13 71.6
MsG0680030726.01.T01 AT5G27750 33.846 195 110 8 50 231 5 193 2.20e-13 72.0
MsG0680030726.01.T01 AT2G42730 23.144 458 267 15 47 427 2 451 2.50e-13 72.0
MsG0680030726.01.T01 AT3G62440 24.947 473 238 19 49 424 1 453 3.02e-13 71.6
MsG0680030726.01.T01 AT5G22730 28.814 236 129 7 37 256 18 230 3.18e-13 71.6
MsG0680030726.01.T01 AT5G22730 28.814 236 129 7 37 256 18 230 3.18e-13 71.6
MsG0680030726.01.T01 AT3G59150 33.990 203 111 9 50 237 13 207 3.59e-13 71.6
MsG0680030726.01.T01 AT5G22730 28.814 236 129 7 37 256 18 230 3.74e-13 71.2
MsG0680030726.01.T01 AT3G44060 33.333 192 109 6 55 235 4 187 5.33e-13 70.9
MsG0680030726.01.T01 AT3G59240 24.594 431 220 19 50 389 8 424 6.55e-13 70.9
MsG0680030726.01.T01 AT1G21990 30.000 220 136 8 50 262 9 217 6.78e-13 70.9
MsG0680030726.01.T01 AT1G51370 29.508 183 118 5 50 231 19 191 6.91e-13 70.1
MsG0680030726.01.T01 AT3G58940 23.041 434 211 17 49 391 1 402 8.65e-13 70.9
MsG0680030726.01.T01 AT3G58940 23.041 434 211 17 49 391 1 402 8.65e-13 70.9
MsG0680030726.01.T01 AT1G51370 29.508 183 118 5 50 231 19 191 9.37e-13 70.1
MsG0680030726.01.T01 AT4G00315 31.282 195 119 5 49 234 1 189 9.64e-13 70.1
MsG0680030726.01.T01 AT1G51370 29.508 183 118 5 50 231 19 191 1.08e-12 69.7
MsG0680030726.01.T01 AT3G58900 32.512 203 106 9 49 233 1 190 1.13e-12 69.3
MsG0680030726.01.T01 AT3G58900 32.512 203 106 9 49 233 1 190 1.13e-12 69.3
MsG0680030726.01.T01 AT3G58900 32.512 203 106 9 49 233 1 190 1.31e-12 68.9
MsG0680030726.01.T01 AT3G51530 26.742 445 242 20 50 429 30 455 1.35e-12 69.7
MsG0680030726.01.T01 AT2G26860 27.361 413 215 16 49 392 1 397 1.66e-12 69.3
MsG0680030726.01.T01 AT2G26860 27.361 413 215 16 49 392 1 397 1.66e-12 69.3
MsG0680030726.01.T01 AT5G50270 28.186 408 214 17 49 391 1 394 2.01e-12 68.9
MsG0680030726.01.T01 AT5G44950 32.512 203 114 8 50 239 4 196 2.29e-12 68.9
MsG0680030726.01.T01 AT5G38396 29.630 243 138 9 49 267 1 234 3.66e-12 68.6
MsG0680030726.01.T01 AT3G58930 22.876 459 212 18 49 391 1 433 7.81e-12 67.4
MsG0680030726.01.T01 AT3G58930 22.876 459 212 18 49 391 1 433 7.81e-12 67.4
MsG0680030726.01.T01 AT3G58930 22.876 459 212 18 49 391 1 433 7.81e-12 67.4
MsG0680030726.01.T01 AT1G66300 27.568 185 126 4 49 231 28 206 3.68e-11 65.1
MsG0680030726.01.T01 AT3G58980 23.820 466 238 20 49 424 1 439 3.76e-11 65.5
MsG0680030726.01.T01 AT2G29910 31.720 186 114 6 50 231 5 181 6.26e-11 63.9
MsG0680030726.01.T01 AT2G29910 31.720 186 114 6 50 231 5 181 6.26e-11 63.9
MsG0680030726.01.T01 AT2G29910 31.720 186 114 6 50 231 5 181 6.26e-11 63.9
MsG0680030726.01.T01 AT2G29910 31.720 186 114 6 50 231 5 181 6.26e-11 63.9
MsG0680030726.01.T01 AT2G29910 31.183 186 113 6 50 230 5 180 6.29e-11 63.9
MsG0680030726.01.T01 AT2G29910 31.183 186 113 6 50 230 5 180 6.29e-11 63.9
MsG0680030726.01.T01 AT2G29910 31.720 186 114 6 50 231 29 205 6.65e-11 64.3
MsG0680030726.01.T01 AT3G58960 23.374 492 241 19 49 428 1 468 9.90e-11 63.9

Find 74 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAACATATTCCAAAATT+AGG 0.090079 6:+8091088 None:intergenic
ATCACTCAAAACCCTAATTT+TGG 0.114686 6:-8091100 MsG0680030726.01.T01:CDS
GTTATTTCACGTTTCATAAT+TGG 0.133255 6:-8090780 MsG0680030726.01.T01:CDS
ACACATTCAAGAACTGAAAT+TGG 0.183240 6:+8090574 None:intergenic
ATCCGTGACCTTGCCTAAAT+TGG 0.187710 6:-8090953 MsG0680030726.01.T01:CDS
CTCCTCAGATGAAATGCTTT+TGG 0.197969 6:-8090425 MsG0680030726.01.T01:CDS
GACATTATCAATACCATTAA+AGG 0.213277 6:+8090900 None:intergenic
TCAAATTCTTTATATTAAAA+AGG 0.218680 6:-8090719 MsG0680030726.01.T01:intron
GCATTGGATGCACCCTTTAA+TGG 0.239204 6:-8090913 MsG0680030726.01.T01:CDS
ACTTTGTGTCAAAGGTCTTC+TGG 0.254825 6:-8091615 MsG0680030726.01.T01:CDS
ATGAACATATTCCAAAATTA+GGG 0.275780 6:+8091089 None:intergenic
TAATAATGATGGAAACAATT+TGG 0.314231 6:-8091577 MsG0680030726.01.T01:CDS
ACACGGGCTCTAACCAATTT+AGG 0.333810 6:+8090940 None:intergenic
TGTACCATTCTAAACTTTGA+TGG 0.335877 6:-8090532 MsG0680030726.01.T01:CDS
TTATTTCACGTTTCATAATT+GGG 0.342081 6:-8090779 MsG0680030726.01.T01:CDS
TTTGAAGACCACAAGCAAAA+TGG 0.344869 6:-8091297 MsG0680030726.01.T01:CDS
TTTGAGAACAACAAGGGTTT+GGG 0.353635 6:+8091170 None:intergenic
GTTTGAGAACAACAAGGGTT+TGG 0.355587 6:+8091169 None:intergenic
GTAAATTTAATGTGACAAAA+TGG 0.358180 6:-8091275 MsG0680030726.01.T01:CDS
CGATAGAATCAGTGATTTAC+CGG 0.385308 6:-8091553 MsG0680030726.01.T01:CDS
AATTGGGCATTTGCATTCCT+TGG 0.385518 6:+8090591 None:intergenic
GGTTTGGGAGATGAAAATAT+TGG 0.386161 6:+8091185 None:intergenic
ATATAAAGAATTTGAAGCTT+GGG 0.389867 6:+8090727 None:intergenic
GAATTTGAAGCTTGGGAGAA+TGG 0.398601 6:+8090734 None:intergenic
AAGGAAGGTGTCATAATCTT+TGG 0.399507 6:+8091404 None:intergenic
GTTTGGGAGATGAAAATATT+GGG 0.399523 6:+8091186 None:intergenic
ACGGATTTAAACCCTTCTTT+TGG 0.402393 6:+8090970 None:intergenic
GATGAAAATATTGGGCTTCA+AGG 0.416367 6:+8091194 None:intergenic
AATATAAAGAATTTGAAGCT+TGG 0.418908 6:+8090726 None:intergenic
ATGAGAATCGGCGTTGCTAT+TGG 0.427539 6:-8090448 MsG0680030726.01.T01:CDS
TCATCTTCAAAGCGAAGAAC+GGG 0.441214 6:+8091432 None:intergenic
TTTGCATTCCTTGGACGAGC+TGG 0.450005 6:+8090600 None:intergenic
CACATTCAAGAACTGAAATT+GGG 0.454482 6:+8090575 None:intergenic
ACATTATCAATACCATTAAA+GGG 0.459550 6:+8090901 None:intergenic
ACATGTAAATCTTCTAGAAT+AGG 0.466239 6:+8091024 None:intergenic
CAGCAGACACTTAATAATGA+TGG 0.474266 6:-8091588 MsG0680030726.01.T01:CDS
CCTTGCCGATGAAGAAAAGA+AGG 0.478835 6:-8091979 None:intergenic
TCTTTCAACTTCTTCAGTTG+AGG 0.479664 6:-8091927 MsG0680030726.01.T01:intron
AAGAAGGGAGCGAGCATCGA+TGG 0.483499 6:-8091963 MsG0680030726.01.T01:CDS
ATTTGATGCAATAACTCATC+CGG 0.496363 6:+8091534 None:intergenic
AGTGAGAATGTACCAAAAGA+AGG 0.503064 6:-8090982 MsG0680030726.01.T01:CDS
CTCTTACAAGACATGAGAAT+CGG 0.506747 6:-8090460 MsG0680030726.01.T01:CDS
CACAAAACAACGTAGTATAG+AGG 0.507958 6:-8091244 MsG0680030726.01.T01:CDS
TGAGCCATCAAAGTTTAGAA+TGG 0.518337 6:+8090528 None:intergenic
GAAGGTGTCATAATCTTTGG+TGG 0.519556 6:+8091407 None:intergenic
TTCCAAAAGCATTTCATCTG+AGG 0.524039 6:+8090423 None:intergenic
TGGAGATATCCTTCGATAGG+AGG 0.527918 6:+8090375 None:intergenic
TTGTTGTTCTCAAACTTGAA+AGG 0.531061 6:-8091161 MsG0680030726.01.T01:CDS
CATCGGAATGACATTAAAAG+AGG 0.533547 6:+8090837 None:intergenic
TTCATCTTCAAAGCGAAGAA+CGG 0.534271 6:+8091431 None:intergenic
TGAATTAAGTTTGAAAACAT+CGG 0.545983 6:+8090820 None:intergenic
CCTTCGCTTCTGTCGCATTG+TGG 0.551655 6:-8091385 MsG0680030726.01.T01:CDS
GACGAAGACCAGCTCGTCCA+AGG 0.553186 6:-8090608 MsG0680030726.01.T01:CDS
ATGATCTGACTTTGTGTCAA+AGG 0.555486 6:-8091623 MsG0680030726.01.T01:CDS
GTGAGAATGTACCAAAAGAA+GGG 0.561958 6:-8090981 MsG0680030726.01.T01:CDS
GCTCCAGCGTTTCGAAAGAA+CGG 0.577166 6:+8091473 None:intergenic
CAACCGTTCTTTCGAAACGC+TGG 0.580821 6:-8091476 MsG0680030726.01.T01:CDS
AGGGGTTGGTTGGTTGCACG+AGG 0.585329 6:+8091345 None:intergenic
AACCAATTTAGGCAAGGTCA+CGG 0.589515 6:+8090951 None:intergenic
AAATATTGGGCTTCAAGGTG+TGG 0.591032 6:+8091199 None:intergenic
TGGTTGCACGAGGAGAGAGC+AGG 0.591994 6:+8091355 None:intergenic
TAGAGCCCGTGTCAATGCAT+TGG 0.597399 6:-8090929 MsG0680030726.01.T01:CDS
CCACAATGCGACAGAAGCGA+AGG 0.602167 6:+8091385 None:intergenic
AAGAATTGTCCTCCTATCGA+AGG 0.605102 6:-8090384 MsG0680030726.01.T01:CDS
GGCTCTAACCAATTTAGGCA+AGG 0.610279 6:+8090945 None:intergenic
TTCAAGTTTGAGAACAACAA+GGG 0.614248 6:+8091164 None:intergenic
GTGCATCCAATGCATTGACA+CGG 0.626402 6:+8090923 None:intergenic
TGCATCCAATGCATTGACAC+GGG 0.631056 6:+8090924 None:intergenic
AATGCGACAGAAGCGAAGGA+AGG 0.647866 6:+8091389 None:intergenic
TTTGAAGCTTGGGAGAATGG+CGG 0.651840 6:+8090737 None:intergenic
CTTGCCGATGAAGAAAAGAA+GGG 0.652979 6:-8091978 None:intergenic
TTAGAATGGTACATGATCTG+AGG 0.654878 6:+8090542 None:intergenic
TTTCAAGTTTGAGAACAACA+AGG 0.661143 6:+8091163 None:intergenic
GGTCTTCAAAAGGACACTTG+AGG 0.677565 6:+8091310 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAATTCTTTATATTAAAA+AGG - Chr6:8091582-8091601 MsG0680030726.01.T01:CDS 10.0%
!!! ATCAAAAATATTTTATCTTG+TGG - Chr6:8090639-8090658 MsG0680030726.01.T01:intron 15.0%
!!! TCAAATGAAATTTTACATTT+TGG + Chr6:8091949-8091968 None:intergenic 15.0%
!!! TGATCATAGATTTTATTTAT+AGG - Chr6:8090610-8090629 MsG0680030726.01.T01:CDS 15.0%
!!! TTTTAAGTAAATTATAGTAG+CGG - Chr6:8090580-8090599 MsG0680030726.01.T01:CDS 15.0%
!! AATGAACATATTCCAAAATT+AGG + Chr6:8091216-8091235 None:intergenic 20.0%
!! ACATTATCAATACCATTAAA+GGG + Chr6:8091403-8091422 None:intergenic 20.0%
!! ATGAACATATTCCAAAATTA+GGG + Chr6:8091215-8091234 None:intergenic 20.0%
!! GTAAATTTAATGTGACAAAA+TGG - Chr6:8091026-8091045 MsG0680030726.01.T01:CDS 20.0%
!! TGAATTAAGTTTGAAAACAT+CGG + Chr6:8091484-8091503 None:intergenic 20.0%
!! TTATTTCACGTTTCATAATT+GGG - Chr6:8091522-8091541 MsG0680030726.01.T01:CDS 20.0%
!!! AAACCAATATGTTTGATAAT+TGG - Chr6:8090501-8090520 MsG0680030726.01.T01:CDS 20.0%
!!! AATATAAAGAATTTGAAGCT+TGG + Chr6:8091578-8091597 None:intergenic 20.0%
!!! ATATAAAGAATTTGAAGCTT+GGG + Chr6:8091577-8091596 None:intergenic 20.0%
!!! ATATTTTATCTTGTGGTTTT+AGG - Chr6:8090646-8090665 MsG0680030726.01.T01:intron 20.0%
!!! ATTTTTTATCCTTTTGATAG+TGG - Chr6:8091671-8091690 MsG0680030726.01.T01:intron 20.0%
!!! TAATAATGATGGAAACAATT+TGG - Chr6:8090724-8090743 MsG0680030726.01.T01:CDS 20.0%
! CATCCAATTATCAAACATAT+TGG + Chr6:8090507-8090526 None:intergenic 25.0%
! GACATTATCAATACCATTAA+AGG + Chr6:8091404-8091423 None:intergenic 25.0%
!! CAATATGTTTGATAATTGGA+TGG - Chr6:8090505-8090524 MsG0680030726.01.T01:CDS 25.0%
!! GTTATTTCACGTTTCATAAT+TGG - Chr6:8091521-8091540 MsG0680030726.01.T01:CDS 25.0%
!! TAAATTTACCATTTTGCTTG+TGG + Chr6:8091015-8091034 None:intergenic 25.0%
!!! ACATGTAAATCTTCTAGAAT+AGG + Chr6:8091280-8091299 None:intergenic 25.0%
ACACATTCAAGAACTGAAAT+TGG + Chr6:8091730-8091749 None:intergenic 30.0%
ATTTGATGCAATAACTCATC+CGG + Chr6:8090770-8090789 None:intergenic 30.0%
CACATTCAAGAACTGAAATT+GGG + Chr6:8091729-8091748 None:intergenic 30.0%
CATGTATTACACTCTTTGTT+AGG - Chr6:8090407-8090426 MsG0680030726.01.T01:CDS 30.0%
CTACAGAAATCACAAATATC+TGG + Chr6:8090545-8090564 None:intergenic 30.0%
GTTTGGGAGATGAAAATATT+GGG + Chr6:8091118-8091137 None:intergenic 30.0%
TGTACCATTCTAAACTTTGA+TGG - Chr6:8091769-8091788 MsG0680030726.01.T01:intron 30.0%
! ATCACTCAAAACCCTAATTT+TGG - Chr6:8091201-8091220 MsG0680030726.01.T01:CDS 30.0%
! TAGCGTGAGTTAATGTTTTT+AGG - Chr6:8090458-8090477 MsG0680030726.01.T01:CDS 30.0%
! TTCAAGTTTGAGAACAACAA+GGG + Chr6:8091140-8091159 None:intergenic 30.0%
! TTGTTGTTCTCAAACTTGAA+AGG - Chr6:8091140-8091159 MsG0680030726.01.T01:CDS 30.0%
!! AGCGTGAGTTAATGTTTTTA+GGG - Chr6:8090459-8090478 MsG0680030726.01.T01:CDS 30.0%
!! TTTCAAGTTTGAGAACAACA+AGG + Chr6:8091141-8091160 None:intergenic 30.0%
!!! AAAATTAGGGTTTTGAGTGA+TGG + Chr6:8091202-8091221 None:intergenic 30.0%
!!! CACAAGATTTTGTTTTGAAG+AGG - Chr6:8091441-8091460 MsG0680030726.01.T01:CDS 30.0%
!!! TAGTGAAAGAGAGTTTTGTT+GGG + Chr6:8090805-8090824 None:intergenic 30.0%
AGTGAGAATGTACCAAAAGA+AGG - Chr6:8091319-8091338 MsG0680030726.01.T01:CDS 35.0%
ATGATCTGACTTTGTGTCAA+AGG - Chr6:8090678-8090697 MsG0680030726.01.T01:intron 35.0%
CACAAAACAACGTAGTATAG+AGG - Chr6:8091057-8091076 MsG0680030726.01.T01:CDS 35.0%
CAGCAGACACTTAATAATGA+TGG - Chr6:8090713-8090732 MsG0680030726.01.T01:intron 35.0%
CATCGGAATGACATTAAAAG+AGG + Chr6:8091467-8091486 None:intergenic 35.0%
CGATAGAATCAGTGATTTAC+CGG - Chr6:8090748-8090767 MsG0680030726.01.T01:CDS 35.0%
CTCTTACAAGACATGAGAAT+CGG - Chr6:8091841-8091860 MsG0680030726.01.T01:intron 35.0%
GATGAAAATATTGGGCTTCA+AGG + Chr6:8091110-8091129 None:intergenic 35.0%
GGTTTGGGAGATGAAAATAT+TGG + Chr6:8091119-8091138 None:intergenic 35.0%
GTGAGAATGTACCAAAAGAA+GGG - Chr6:8091320-8091339 MsG0680030726.01.T01:CDS 35.0%
TCTTTCAACTTCTTCAGTTG+AGG - Chr6:8090374-8090393 MsG0680030726.01.T01:CDS 35.0%
TGAGCCATCAAAGTTTAGAA+TGG + Chr6:8091776-8091795 None:intergenic 35.0%
TTAGAATGGTACATGATCTG+AGG + Chr6:8091762-8091781 None:intergenic 35.0%
TTCATCTTCAAAGCGAAGAA+CGG + Chr6:8090873-8090892 None:intergenic 35.0%
TTTGAAGACCACAAGCAAAA+TGG - Chr6:8091004-8091023 MsG0680030726.01.T01:CDS 35.0%
TTTGAGAACAACAAGGGTTT+GGG + Chr6:8091134-8091153 None:intergenic 35.0%
! ACGGATTTAAACCCTTCTTT+TGG + Chr6:8091334-8091353 None:intergenic 35.0%
! TTTTGCTTGTGGTCTTCAAA+AGG + Chr6:8091004-8091023 None:intergenic 35.0%
!! AAGGAAGGTGTCATAATCTT+TGG + Chr6:8090900-8090919 None:intergenic 35.0%
!! CTCTATACTACGTTGTTTTG+TGG + Chr6:8091059-8091078 None:intergenic 35.0%
!! GTAGTGAAAGAGAGTTTTGT+TGG + Chr6:8090806-8090825 None:intergenic 35.0%
!! TTCCAAAAGCATTTCATCTG+AGG + Chr6:8091881-8091900 None:intergenic 35.0%
!! TTTTGGAGATATCCTTCGAT+AGG + Chr6:8091932-8091951 None:intergenic 35.0%
AAATATTGGGCTTCAAGGTG+TGG + Chr6:8091105-8091124 None:intergenic 40.0%
AACCAATTTAGGCAAGGTCA+CGG + Chr6:8091353-8091372 None:intergenic 40.0%
AAGAATTGTCCTCCTATCGA+AGG - Chr6:8091917-8091936 MsG0680030726.01.T01:intron 40.0%
AATTGGGCATTTGCATTCCT+TGG + Chr6:8091713-8091732 None:intergenic 40.0%
ACTTTGTGTCAAAGGTCTTC+TGG - Chr6:8090686-8090705 MsG0680030726.01.T01:intron 40.0%
GTTTGAGAACAACAAGGGTT+TGG + Chr6:8091135-8091154 None:intergenic 40.0%
TCATCTTCAAAGCGAAGAAC+GGG + Chr6:8090872-8090891 None:intergenic 40.0%
! ACTTGAGGCGAAACATTTTG+AGG + Chr6:8090979-8090998 None:intergenic 40.0%
! CTCCTCAGATGAAATGCTTT+TGG - Chr6:8091876-8091895 MsG0680030726.01.T01:intron 40.0%
! CTTGAGGCGAAACATTTTGA+GGG + Chr6:8090978-8090997 None:intergenic 40.0%
! GAATTTGAAGCTTGGGAGAA+TGG + Chr6:8091570-8091589 None:intergenic 40.0%
! TTGAGGCGAAACATTTTGAG+GGG + Chr6:8090977-8090996 None:intergenic 40.0%
!! AAACATTTTGAGGGGTTGGT+TGG + Chr6:8090969-8090988 None:intergenic 40.0%
!! GAAGGTGTCATAATCTTTGG+TGG + Chr6:8090897-8090916 None:intergenic 40.0%
ATCCGTGACCTTGCCTAAAT+TGG - Chr6:8091348-8091367 MsG0680030726.01.T01:CDS 45.0%
ATGAGAATCGGCGTTGCTAT+TGG - Chr6:8091853-8091872 MsG0680030726.01.T01:intron 45.0%
GCATTGGATGCACCCTTTAA+TGG - Chr6:8091388-8091407 MsG0680030726.01.T01:CDS 45.0%
GGTCTTCAAAAGGACACTTG+AGG + Chr6:8090994-8091013 None:intergenic 45.0%
GGTCTTCGTCCACTATCAAA+AGG + Chr6:8091683-8091702 None:intergenic 45.0%
TGGAGATATCCTTCGATAGG+AGG + Chr6:8091929-8091948 None:intergenic 45.0%
! ACACGGGCTCTAACCAATTT+AGG + Chr6:8091364-8091383 None:intergenic 45.0%
! GGCTCTAACCAATTTAGGCA+AGG + Chr6:8091359-8091378 None:intergenic 45.0%
! GTGCATCCAATGCATTGACA+CGG + Chr6:8091381-8091400 None:intergenic 45.0%
! TGCATCCAATGCATTGACAC+GGG + Chr6:8091380-8091399 None:intergenic 45.0%
! TTTGAAGCTTGGGAGAATGG+CGG + Chr6:8091567-8091586 None:intergenic 45.0%
!! GAGCATCGATGGAGAAAAAG+AGG - Chr6:8090349-8090368 MsG0680030726.01.T01:CDS 45.0%
AATGCGACAGAAGCGAAGGA+AGG + Chr6:8090915-8090934 None:intergenic 50.0%
CAACCGTTCTTTCGAAACGC+TGG - Chr6:8090825-8090844 MsG0680030726.01.T01:CDS 50.0%
GCTCCAGCGTTTCGAAAGAA+CGG + Chr6:8090831-8090850 None:intergenic 50.0%
TAGAGCCCGTGTCAATGCAT+TGG - Chr6:8091372-8091391 MsG0680030726.01.T01:CDS 50.0%
TTTGCATTCCTTGGACGAGC+TGG + Chr6:8091704-8091723 None:intergenic 50.0%
!! GGCGAAACATTTTGAGGGGT+TGG + Chr6:8090973-8090992 None:intergenic 50.0%
CCACAATGCGACAGAAGCGA+AGG + Chr6:8090919-8090938 None:intergenic 55.0%
CCTTCGCTTCTGTCGCATTG+TGG - Chr6:8090916-8090935 MsG0680030726.01.T01:CDS 55.0%
!! AAGAAGGGAGCGAGCATCGA+TGG - Chr6:8090338-8090357 MsG0680030726.01.T01:CDS 55.0%
GACGAAGACCAGCTCGTCCA+AGG - Chr6:8091693-8091712 MsG0680030726.01.T01:intron 60.0%
TGGTTGCACGAGGAGAGAGC+AGG + Chr6:8090949-8090968 None:intergenic 60.0%
!! AGGGGTTGGTTGGTTGCACG+AGG + Chr6:8090959-8090978 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 8090330 8091993 8090330 ID=MsG0680030726.01;Name=MsG0680030726.01
Chr6 mRNA 8090330 8091993 8090330 ID=MsG0680030726.01.T01;Parent=MsG0680030726.01;Name=MsG0680030726.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|0.5|0.66|3|0|434
Chr6 exon 8091928 8091993 8091928 ID=MsG0680030726.01.T01:exon:7024;Parent=MsG0680030726.01.T01
Chr6 exon 8090720 8091655 8090720 ID=MsG0680030726.01.T01:exon:7023;Parent=MsG0680030726.01.T01
Chr6 exon 8090330 8090632 8090330 ID=MsG0680030726.01.T01:exon:7022;Parent=MsG0680030726.01.T01
Chr6 CDS 8091928 8091993 8091928 ID=MsG0680030726.01.T01:cds;Parent=MsG0680030726.01.T01
Chr6 CDS 8090720 8091655 8090720 ID=MsG0680030726.01.T01:cds;Parent=MsG0680030726.01.T01
Chr6 CDS 8090330 8090632 8090330 ID=MsG0680030726.01.T01:cds;Parent=MsG0680030726.01.T01
Gene Sequence

>MsG0680030726.01.T01

ATGAAGAAAAGAAGGGAGCGAGCATCGATGGAGAAAAAGAGGCTTCTTTCAACTTCTTCAGTTGAGGTATGCTATGATGATCTGACTTTGTGTCAAAGGTCTTCTGGTTCACAGCAGACACTTAATAATGATGGAAACAATTTGGTCGATAGAATCAGTGATTTACCGGATGAGTTATTGCATCAAATTCTCTGTTTTCTCCCAACAAAACTCTCTTTCACTACAACCGTTCTTTCGAAACGCTGGAGCAAGCTATGTTGTTCACTACCCGTTCTTCGCTTTGAAGATGAAACCACCAAAGATTATGACACCTTCCTTCGCTTCTGTCGCATTGTGGATACTATCCTGCTCTCTCCTCGTGCAACCAACCAACCCCTCAAAATGTTTCGCCTCAAGTGTCCTTTTGAAGACCACAAGCAAAATGGTAAATTTAATGTGACAAAATGGCTAGAAGCCACAAAACAACGTAGTATAGAGGAAATTCATCTCACTCTATATTACCACACCTTGAAGCCCAATATTTTCATCTCCCAAACCCTTGTTGTTCTCAAACTTGAAAGGTTAACTGTTGAAAAAGATACTTCATGTGTTGATCTTCCATCACTCAAAACCCTAATTTTGGAATATGTTCATTTTGAAAATTTGAATGATTATATAAATTTTCTCAATGCTTGTCCTATTCTAGAAGATTTACATGTTGAGTATATCAATATACTTAGTGAGAATGTACCAAAAGAAGGGTTTAAATCCGTGACCTTGCCTAAATTGGTTAGAGCCCGTGTCAATGCATTGGATGCACCCTTTAATGGTATTGATAATGTCGTGTTTCTACGCATTATCACAAGATTTTGTTTTGAAGAGGCCTCTTTTAATGTCATTCCGATGTTTTCAAACTTAATTCATATTGAACTAGAGTTTTGTTATTTCACGTTTCATAATTGGGATTGTGTAGTAGAACTTCTCCGCCATTCTCCCAAGCTTCAAATTCTTTATATTAAAAAGTGGACGAAGACCAGCTCGTCCAAGGAATGCAAATGCCCAATTTCAGTTCTTGAATGTGTTTTGTCACACCTCAGATCATGTACCATTCTAAACTTTGATGGCTCAGTAAATGATCTTCGATTTGCAAAATATATTTTGCAGAATGCGAGTCTCTTACAAGACATGAGAATCGGCGTTGCTATTGGCTCCTCAGATGAAATGCTTTTGGAAATAAATCAAATTAGAGAAGAATTGTCCTCCTATCGAAGGATATCTCCAAAATGTAAAATTTCATTTGAATTTGAATTTAAGTATGTTTACTAG
Protein sequence

>MsG0680030726.01.T01

MKKRRERASMEKKRLLSTSSVEVCYDDLTLCQRSSGSQQTLNNDGNNLVDRISDLPDELLHQILCFLPTKLSFTTTVLSKRWSKLCCSLPVLRFEDETTKDYDTFLRFCRIVDTILLSPRATNQPLKMFRLKCPFEDHKQNGKFNVTKWLEATKQRSIEEIHLTLYYHTLKPNIFISQTLVVLKLERLTVEKDTSCVDLPSLKTLILEYVHFENLNDYINFLNACPILEDLHVEYINILSENVPKEGFKSVTLPKLVRARVNALDAPFNGIDNVVFLRIITRFCFEEASFNVIPMFSNLIHIELEFCYFTFHNWDCVVELLRHSPKLQILYIKKWTKTSSSKECKCPISVLECVLSHLRSCTILNFDGSVNDLRFAKYILQNASLLQDMRIGVAIGSSDEMLLEINQIREELSSYRRISPKCKISFEFEFKYVY*