Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006686.01.T01 | KEH25410.1 | 82.192 | 219 | 39 | 0 | 1 | 219 | 221 | 439 | 1.42E-121 | 365 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006686.01.T01 | A0A072UI00 | 82.192 | 219 | 39 | 0 | 1 | 219 | 221 | 439 | 6.77e-122 | 365 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006686.01.T01 | MTR_6g022500 | 82.192 | 219 | 39 | 0 | 1 | 219 | 221 | 439 | 1.72e-125 | 365 |
MsG0280006686.01.T01 | MTR_1g085120 | 59.070 | 215 | 84 | 1 | 1 | 211 | 212 | 426 | 9.56e-80 | 248 |
MsG0280006686.01.T01 | MTR_1g085120 | 59.070 | 215 | 84 | 1 | 1 | 211 | 287 | 501 | 4.91e-79 | 248 |
MsG0280006686.01.T01 | MTR_4g039440 | 56.422 | 218 | 90 | 1 | 1 | 213 | 149 | 366 | 1.08e-73 | 231 |
MsG0280006686.01.T01 | MTR_6g022520 | 59.174 | 218 | 84 | 1 | 1 | 213 | 53 | 270 | 7.11e-73 | 225 |
MsG0280006686.01.T01 | MTR_6g011460 | 55.760 | 217 | 93 | 2 | 1 | 217 | 166 | 379 | 2.49e-69 | 219 |
MsG0280006686.01.T01 | MTR_7g055943 | 51.982 | 227 | 103 | 4 | 1 | 224 | 160 | 383 | 2.93e-60 | 196 |
MsG0280006686.01.T01 | MTR_6g022360 | 51.584 | 221 | 102 | 3 | 1 | 217 | 150 | 369 | 4.04e-59 | 192 |
MsG0280006686.01.T01 | MTR_1g085120 | 58.235 | 170 | 67 | 1 | 1 | 166 | 299 | 468 | 6.13e-54 | 181 |
MsG0280006686.01.T01 | MTR_5g073420 | 46.544 | 217 | 104 | 6 | 1 | 217 | 134 | 338 | 2.23e-52 | 174 |
MsG0280006686.01.T01 | MTR_1089s0010 | 47.887 | 213 | 103 | 5 | 2 | 213 | 128 | 333 | 7.70e-50 | 168 |
MsG0280006686.01.T01 | MTR_1g066830 | 47.945 | 219 | 106 | 4 | 1 | 213 | 127 | 343 | 3.44e-49 | 166 |
MsG0280006686.01.T01 | MTR_6g044572 | 46.296 | 216 | 87 | 4 | 1 | 211 | 149 | 340 | 9.25e-46 | 157 |
MsG0280006686.01.T01 | MTR_5g058100 | 45.327 | 214 | 113 | 4 | 2 | 213 | 129 | 340 | 3.91e-45 | 155 |
MsG0280006686.01.T01 | MTR_5g058000 | 48.357 | 213 | 99 | 5 | 1 | 211 | 126 | 329 | 2.63e-44 | 153 |
MsG0280006686.01.T01 | MTR_6g044560 | 46.296 | 216 | 87 | 4 | 1 | 211 | 325 | 516 | 3.51e-44 | 157 |
MsG0280006686.01.T01 | MTR_6g040270 | 43.458 | 214 | 115 | 4 | 1 | 213 | 127 | 335 | 2.69e-42 | 148 |
MsG0280006686.01.T01 | MTR_5g076150 | 44.286 | 210 | 91 | 6 | 1 | 188 | 22 | 227 | 2.90e-38 | 134 |
MsG0280006686.01.T01 | MTR_6g045333 | 36.652 | 221 | 128 | 5 | 1 | 211 | 183 | 401 | 3.04e-31 | 120 |
MsG0280006686.01.T01 | MTR_0009s0080 | 36.530 | 219 | 130 | 5 | 1 | 211 | 138 | 355 | 2.71e-30 | 117 |
MsG0280006686.01.T01 | MTR_1g108820 | 35.586 | 222 | 128 | 6 | 1 | 211 | 123 | 340 | 6.35e-30 | 115 |
MsG0280006686.01.T01 | MTR_7g026500 | 36.199 | 221 | 125 | 6 | 1 | 213 | 142 | 354 | 5.74e-28 | 110 |
MsG0280006686.01.T01 | MTR_5g007410 | 32.420 | 219 | 140 | 5 | 1 | 211 | 145 | 363 | 4.93e-27 | 108 |
MsG0280006686.01.T01 | MTR_3g095630 | 43.478 | 138 | 73 | 2 | 76 | 213 | 9 | 141 | 5.20e-27 | 103 |
MsG0280006686.01.T01 | MTR_5g033200 | 46.212 | 132 | 66 | 4 | 82 | 213 | 10 | 136 | 1.91e-26 | 102 |
MsG0280006686.01.T01 | MTR_3g071850 | 33.484 | 221 | 135 | 5 | 1 | 211 | 146 | 364 | 9.32e-26 | 106 |
MsG0280006686.01.T01 | MTR_1377s0010 | 47.826 | 115 | 56 | 2 | 99 | 213 | 7 | 117 | 1.27e-25 | 98.6 |
MsG0280006686.01.T01 | MTR_5g073370 | 36.150 | 213 | 121 | 7 | 5 | 211 | 132 | 335 | 2.08e-25 | 103 |
MsG0280006686.01.T01 | MTR_5g061680 | 38.462 | 195 | 86 | 6 | 1 | 192 | 132 | 295 | 1.01e-24 | 100 |
MsG0280006686.01.T01 | MTR_5g045170 | 33.636 | 220 | 135 | 7 | 1 | 213 | 133 | 348 | 6.84e-24 | 99.4 |
MsG0280006686.01.T01 | MTR_5g054920 | 35.176 | 199 | 101 | 7 | 58 | 245 | 12 | 193 | 1.65e-23 | 94.4 |
MsG0280006686.01.T01 | MTR_6g033095 | 35.323 | 201 | 72 | 3 | 13 | 213 | 32 | 174 | 2.74e-22 | 91.3 |
MsG0280006686.01.T01 | MTR_7g034120 | 34.466 | 206 | 121 | 6 | 13 | 213 | 74 | 270 | 1.51e-21 | 91.7 |
MsG0280006686.01.T01 | MTR_1g108800 | 37.220 | 223 | 117 | 7 | 1 | 213 | 90 | 299 | 5.14e-21 | 90.9 |
MsG0280006686.01.T01 | MTR_3g095600 | 33.491 | 212 | 81 | 5 | 1 | 211 | 104 | 256 | 3.35e-20 | 87.8 |
MsG0280006686.01.T01 | MTR_3g071790 | 31.098 | 164 | 104 | 4 | 58 | 213 | 36 | 198 | 9.54e-20 | 84.7 |
MsG0280006686.01.T01 | MTR_5g039450 | 33.333 | 195 | 116 | 5 | 28 | 211 | 132 | 323 | 1.97e-19 | 86.7 |
MsG0280006686.01.T01 | MTR_5g039470 | 32.301 | 226 | 135 | 6 | 1 | 213 | 101 | 321 | 2.69e-19 | 85.9 |
MsG0280006686.01.T01 | MTR_7g056287 | 35.233 | 193 | 100 | 7 | 28 | 211 | 151 | 327 | 1.12e-18 | 84.7 |
MsG0280006686.01.T01 | MTR_7g098570 | 33.790 | 219 | 134 | 7 | 1 | 213 | 137 | 350 | 4.39e-18 | 83.6 |
MsG0280006686.01.T01 | MTR_7g056277 | 35.233 | 193 | 100 | 7 | 28 | 211 | 407 | 583 | 8.35e-18 | 82.8 |
MsG0280006686.01.T01 | MTR_1g059860 | 28.685 | 251 | 137 | 6 | 1 | 213 | 62 | 308 | 1.20e-17 | 81.3 |
MsG0280006686.01.T01 | MTR_7g115270 | 30.493 | 223 | 138 | 7 | 5 | 213 | 140 | 359 | 1.32e-17 | 81.6 |
MsG0280006686.01.T01 | MTR_1g108820 | 33.898 | 177 | 105 | 4 | 1 | 166 | 123 | 298 | 1.33e-17 | 81.3 |
MsG0280006686.01.T01 | MTR_4g098590 | 34.197 | 193 | 111 | 6 | 28 | 211 | 157 | 342 | 2.62e-17 | 80.9 |
MsG0280006686.01.T01 | MTR_3g087260 | 29.778 | 225 | 147 | 3 | 1 | 219 | 201 | 420 | 3.37e-17 | 80.9 |
MsG0280006686.01.T01 | MTR_5g073340 | 32.828 | 198 | 118 | 7 | 5 | 191 | 106 | 299 | 3.52e-17 | 79.7 |
MsG0280006686.01.T01 | MTR_7g088260 | 30.493 | 223 | 135 | 7 | 1 | 213 | 208 | 420 | 3.98e-17 | 80.5 |
MsG0280006686.01.T01 | MTR_2g007450 | 30.901 | 233 | 127 | 10 | 5 | 211 | 156 | 380 | 6.11e-17 | 80.1 |
MsG0280006686.01.T01 | MTR_7g098510 | 32.877 | 219 | 136 | 7 | 1 | 213 | 135 | 348 | 9.15e-17 | 79.3 |
MsG0280006686.01.T01 | MTR_5g031970 | 28.000 | 225 | 129 | 5 | 1 | 219 | 122 | 319 | 9.23e-17 | 79.0 |
MsG0280006686.01.T01 | MTR_3g109982 | 33.023 | 215 | 128 | 8 | 5 | 211 | 224 | 430 | 9.28e-17 | 79.7 |
MsG0280006686.01.T01 | MTR_7g033990 | 29.500 | 200 | 127 | 6 | 24 | 219 | 158 | 347 | 2.46e-16 | 78.2 |
MsG0280006686.01.T01 | MTR_3g023630 | 31.651 | 218 | 134 | 7 | 1 | 213 | 128 | 335 | 2.81e-16 | 77.8 |
MsG0280006686.01.T01 | MTR_7g022105 | 29.464 | 224 | 146 | 6 | 5 | 219 | 169 | 389 | 2.93e-15 | 75.1 |
MsG0280006686.01.T01 | MTR_5g045510 | 30.045 | 223 | 124 | 8 | 1 | 213 | 129 | 329 | 3.96e-15 | 74.3 |
MsG0280006686.01.T01 | MTR_3g105060 | 29.353 | 201 | 118 | 5 | 28 | 224 | 159 | 339 | 5.99e-15 | 73.9 |
MsG0280006686.01.T01 | MTR_7g021990 | 28.821 | 229 | 141 | 7 | 5 | 219 | 168 | 388 | 6.26e-15 | 73.9 |
MsG0280006686.01.T01 | MTR_3g040700 | 29.493 | 217 | 127 | 8 | 5 | 213 | 166 | 364 | 7.41e-15 | 73.9 |
MsG0280006686.01.T01 | MTR_0543s0010 | 32.143 | 224 | 130 | 9 | 5 | 219 | 203 | 413 | 8.10e-15 | 73.9 |
MsG0280006686.01.T01 | MTR_0492s0020 | 32.883 | 222 | 131 | 9 | 5 | 219 | 203 | 413 | 8.75e-15 | 73.6 |
MsG0280006686.01.T01 | MTR_7g021950 | 28.761 | 226 | 147 | 7 | 5 | 220 | 168 | 389 | 9.51e-15 | 73.6 |
MsG0280006686.01.T01 | MTR_2g036470 | 30.222 | 225 | 136 | 9 | 2 | 211 | 133 | 351 | 1.03e-14 | 73.2 |
MsG0280006686.01.T01 | MTR_7g098480 | 30.841 | 214 | 137 | 6 | 5 | 213 | 139 | 346 | 1.30e-14 | 73.2 |
MsG0280006686.01.T01 | MTR_5g013500 | 30.097 | 206 | 117 | 6 | 28 | 213 | 124 | 322 | 1.38e-14 | 72.8 |
MsG0280006686.01.T01 | MTR_7g056433 | 30.667 | 225 | 130 | 9 | 3 | 213 | 134 | 346 | 1.39e-14 | 72.8 |
MsG0280006686.01.T01 | MTR_5g008950 | 28.365 | 208 | 136 | 5 | 12 | 213 | 124 | 324 | 1.43e-14 | 72.8 |
MsG0280006686.01.T01 | MTR_3g107120 | 32.653 | 196 | 117 | 7 | 24 | 211 | 164 | 352 | 1.50e-14 | 72.8 |
MsG0280006686.01.T01 | MTR_5g024060 | 42.045 | 88 | 50 | 1 | 125 | 211 | 79 | 166 | 2.01e-14 | 71.2 |
MsG0280006686.01.T01 | MTR_7g007080 | 30.332 | 211 | 128 | 6 | 1 | 201 | 129 | 330 | 3.06e-14 | 72.0 |
MsG0280006686.01.T01 | MTR_2g007500 | 30.570 | 193 | 109 | 6 | 28 | 203 | 151 | 335 | 1.20e-13 | 70.1 |
MsG0280006686.01.T01 | MTR_3g107160 | 27.835 | 194 | 129 | 3 | 24 | 211 | 156 | 344 | 1.79e-13 | 69.7 |
MsG0280006686.01.T01 | MTR_2g007400 | 29.557 | 203 | 120 | 7 | 10 | 198 | 154 | 347 | 1.80e-13 | 69.7 |
MsG0280006686.01.T01 | MTR_5g008920 | 32.821 | 195 | 119 | 7 | 25 | 213 | 152 | 340 | 2.03e-13 | 69.7 |
MsG0280006686.01.T01 | MTR_5g063950 | 29.224 | 219 | 140 | 7 | 2 | 211 | 105 | 317 | 2.06e-13 | 69.3 |
MsG0280006686.01.T01 | MTR_5g012840 | 29.302 | 215 | 106 | 6 | 1 | 211 | 103 | 275 | 2.96e-13 | 68.6 |
MsG0280006686.01.T01 | MTR_3g108150 | 30.275 | 218 | 138 | 7 | 5 | 213 | 132 | 344 | 3.98e-13 | 68.6 |
MsG0280006686.01.T01 | MTR_3g107100 | 32.579 | 221 | 128 | 8 | 3 | 211 | 133 | 344 | 4.21e-13 | 68.6 |
MsG0280006686.01.T01 | MTR_2g008320 | 28.395 | 243 | 153 | 9 | 5 | 234 | 177 | 411 | 1.49e-12 | 67.0 |
MsG0280006686.01.T01 | MTR_1g107385 | 32.864 | 213 | 116 | 10 | 5 | 201 | 170 | 371 | 3.29e-12 | 66.2 |
MsG0280006686.01.T01 | MTR_7g056020 | 30.045 | 223 | 135 | 6 | 5 | 217 | 124 | 335 | 4.95e-12 | 65.9 |
MsG0280006686.01.T01 | MTR_7g033915 | 32.374 | 139 | 85 | 4 | 85 | 219 | 196 | 329 | 9.51e-12 | 64.7 |
MsG0280006686.01.T01 | MTR_2g008310 | 27.801 | 241 | 155 | 9 | 5 | 234 | 123 | 355 | 1.96e-11 | 63.5 |
MsG0280006686.01.T01 | MTR_7g060470 | 27.935 | 247 | 143 | 10 | 1 | 219 | 116 | 355 | 2.98e-11 | 63.2 |
MsG0280006686.01.T01 | MTR_1g041245 | 31.193 | 218 | 131 | 11 | 5 | 211 | 133 | 342 | 3.95e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 43 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCCGATTTGGAAAATAAA+TGG | 0.182901 | 2:+4944147 | None:intergenic |
AAAATCTGCTTTGCTACTTA+TGG | 0.183611 | 2:-4943523 | MsG0280006686.01.T01:CDS |
ACGCATCCAGGAACCGAAAT+TGG | 0.193987 | 2:+4943650 | None:intergenic |
GTTTGAGAACAGCAGGAGTT+TGG | 0.287433 | 2:+4944242 | None:intergenic |
AAGCTTCAAATTCTCTCTAT+TGG | 0.313410 | 2:-4943794 | MsG0280006686.01.T01:CDS |
TCGTCACTCACTTCATTGTT+GGG | 0.322689 | 2:-4943849 | MsG0280006686.01.T01:CDS |
AAATGCCCAATTTCGGTTCC+TGG | 0.326154 | 2:-4943656 | MsG0280006686.01.T01:CDS |
ATCCTTGACATTGCCCAGTT+TGG | 0.332035 | 2:-4944023 | MsG0280006686.01.T01:CDS |
GTCGTCACTCACTTCATTGT+TGG | 0.333214 | 2:-4943850 | MsG0280006686.01.T01:CDS |
TTGATGTAATCATTCCGATT+TGG | 0.335900 | 2:+4944136 | None:intergenic |
TTTGAGAACAGCAGGAGTTT+GGG | 0.337049 | 2:+4944243 | None:intergenic |
GATATTCGCTCTAACCAAAC+TGG | 0.365768 | 2:+4944009 | None:intergenic |
AATTGGGCATTTCCATTCCT+TGG | 0.388158 | 2:+4943667 | None:intergenic |
GGAATGGAAATGCCCAATTT+CGG | 0.395851 | 2:-4943663 | MsG0280006686.01.T01:CDS |
TTTCCATTCCTTGGTTGAGC+TGG | 0.397748 | 2:+4943676 | None:intergenic |
TCAATTGAAACTTTGCAACT+TGG | 0.417294 | 2:+4943442 | None:intergenic |
CGCATCCAGGAACCGAAATT+GGG | 0.425515 | 2:+4943651 | None:intergenic |
GTTTGGGAGATGAAAATAAT+GGG | 0.428323 | 2:+4944259 | None:intergenic |
AGTTTGGGAGATGAAAATAA+TGG | 0.434465 | 2:+4944258 | None:intergenic |
AGTTCTATATGAACTAAGAT+TGG | 0.439286 | 2:+4943881 | None:intergenic |
CAATGTTCGCATTATTTATG+TGG | 0.444214 | 2:+4944065 | None:intergenic |
ATAGAGAGAATTTGAAGCTT+GGG | 0.445729 | 2:+4943797 | None:intergenic |
AACTCAAGTTTGAGAACAGC+AGG | 0.451826 | 2:+4944235 | None:intergenic |
AGAGCGAATATCAATTCAAC+AGG | 0.468291 | 2:-4943998 | MsG0280006686.01.T01:CDS |
AAACTTGAGTTCTTACAACT+TGG | 0.475761 | 2:-4944223 | MsG0280006686.01.T01:CDS |
TTGCAACTTGGAGATATGCT+TGG | 0.488214 | 2:+4943454 | None:intergenic |
GCGAACATTGCACAAGAAGA+AGG | 0.490282 | 2:-4944052 | MsG0280006686.01.T01:CDS |
ATAAATGGATTTCAAATGCA+AGG | 0.508417 | 2:+4944162 | None:intergenic |
AATAGAGAGAATTTGAAGCT+TGG | 0.512060 | 2:+4943796 | None:intergenic |
CGTCACTCACTTCATTGTTG+GGG | 0.519203 | 2:-4943848 | MsG0280006686.01.T01:CDS |
ACATTATCAATACCATAAAA+CGG | 0.532777 | 2:+4943971 | None:intergenic |
AGGTGAGATGAAACGCATCC+AGG | 0.533300 | 2:+4943638 | None:intergenic |
CGAACATTGCACAAGAAGAA+GGG | 0.535809 | 2:-4944051 | MsG0280006686.01.T01:CDS |
CACTCACTTCATTGTTGGGG+TGG | 0.541314 | 2:-4943845 | MsG0280006686.01.T01:CDS |
TCAAATTCTCTCTATTGGCA+AGG | 0.557428 | 2:-4943789 | MsG0280006686.01.T01:intron |
GAGTTACTATTTACAATCAC+AGG | 0.559752 | 2:-4943947 | MsG0280006686.01.T01:CDS |
AACCAAACTGGGCAATGTCA+AGG | 0.572835 | 2:+4944021 | None:intergenic |
TTTGAAGCTTGGGACAGTGA+CGG | 0.595685 | 2:+4943807 | None:intergenic |
ATACCAGCTCAACCAAGGAA+TGG | 0.606316 | 2:-4943679 | MsG0280006686.01.T01:CDS |
ATATTCGCTCTAACCAAACT+GGG | 0.623085 | 2:+4944010 | None:intergenic |
TTAAAACAGTACATAATCTG+AGG | 0.632792 | 2:+4943618 | None:intergenic |
GATGAATACCAGCTCAACCA+AGG | 0.661340 | 2:-4943684 | MsG0280006686.01.T01:CDS |
GAAGCTTGGGACAGTGACGG+AGG | 0.673240 | 2:+4943810 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAGTATTAATCAAAATATA+CGG | + | Chr2:4943985-4944004 | None:intergenic | 10.0% |
!! | ACATTATCAATACCATAAAA+CGG | + | Chr2:4943739-4943758 | None:intergenic | 20.0% |
!!! | AATCCATTTATTTTCCAAAT+CGG | - | Chr2:4943557-4943576 | MsG0280006686.01.T01:CDS | 20.0% |
!!! | ATTAATACTTTTTTCTCTCT+TGG | - | Chr2:4943994-4944013 | MsG0280006686.01.T01:CDS | 20.0% |
! | AGTTCTATATGAACTAAGAT+TGG | + | Chr2:4943829-4943848 | None:intergenic | 25.0% |
! | TTAAAACAGTACATAATCTG+AGG | + | Chr2:4944092-4944111 | None:intergenic | 25.0% |
!! | ATAAATGGATTTCAAATGCA+AGG | + | Chr2:4943548-4943567 | None:intergenic | 25.0% |
!!! | ATTCCGATTTGGAAAATAAA+TGG | + | Chr2:4943563-4943582 | None:intergenic | 25.0% |
!!! | TGTACTGTTTTAAACTTTCA+AGG | - | Chr2:4944099-4944118 | MsG0280006686.01.T01:CDS | 25.0% |
AAACTTGAGTTCTTACAACT+TGG | - | Chr2:4943484-4943503 | MsG0280006686.01.T01:CDS | 30.0% | |
AAGCTTCAAATTCTCTCTAT+TGG | - | Chr2:4943913-4943932 | MsG0280006686.01.T01:CDS | 30.0% | |
AGTTTGGGAGATGAAAATAA+TGG | + | Chr2:4943452-4943471 | None:intergenic | 30.0% | |
CAATGTTCGCATTATTTATG+TGG | + | Chr2:4943645-4943664 | None:intergenic | 30.0% | |
GAGTTACTATTTACAATCAC+AGG | - | Chr2:4943760-4943779 | MsG0280006686.01.T01:intron | 30.0% | |
GTTTGGGAGATGAAAATAAT+GGG | + | Chr2:4943451-4943470 | None:intergenic | 30.0% | |
TAGTAGTTCGTTTGTTTACT+TGG | - | Chr2:4943947-4943966 | MsG0280006686.01.T01:CDS | 30.0% | |
TCAATTGAAACTTTGCAACT+TGG | + | Chr2:4944268-4944287 | None:intergenic | 30.0% | |
TTGATGTAATCATTCCGATT+TGG | + | Chr2:4943574-4943593 | None:intergenic | 30.0% | |
! | AAAATCTGCTTTGCTACTTA+TGG | - | Chr2:4944184-4944203 | MsG0280006686.01.T01:CDS | 30.0% |
! | AATAGAGAGAATTTGAAGCT+TGG | + | Chr2:4943914-4943933 | None:intergenic | 30.0% |
! | ATAGAGAGAATTTGAAGCTT+GGG | + | Chr2:4943913-4943932 | None:intergenic | 30.0% |
! | ATTTCAAATGCAAGGTTTTG+AGG | + | Chr2:4943540-4943559 | None:intergenic | 30.0% |
!! | TTTCAAATGCAAGGTTTTGA+GGG | + | Chr2:4943539-4943558 | None:intergenic | 30.0% |
AGAGCGAATATCAATTCAAC+AGG | - | Chr2:4943709-4943728 | MsG0280006686.01.T01:intron | 35.0% | |
ATATTCGCTCTAACCAAACT+GGG | + | Chr2:4943700-4943719 | None:intergenic | 35.0% | |
TCAAATTCTCTCTATTGGCA+AGG | - | Chr2:4943918-4943937 | MsG0280006686.01.T01:CDS | 35.0% | |
AACTCAAGTTTGAGAACAGC+AGG | + | Chr2:4943475-4943494 | None:intergenic | 40.0% | |
AATTGGGCATTTCCATTCCT+TGG | + | Chr2:4944043-4944062 | None:intergenic | 40.0% | |
CGAACATTGCACAAGAAGAA+GGG | - | Chr2:4943656-4943675 | MsG0280006686.01.T01:CDS | 40.0% | |
GATATTCGCTCTAACCAAAC+TGG | + | Chr2:4943701-4943720 | None:intergenic | 40.0% | |
GGAATGGAAATGCCCAATTT+CGG | - | Chr2:4944044-4944063 | MsG0280006686.01.T01:CDS | 40.0% | |
TCGTCACTCACTTCATTGTT+GGG | - | Chr2:4943858-4943877 | MsG0280006686.01.T01:CDS | 40.0% | |
TTGCAACTTGGAGATATGCT+TGG | + | Chr2:4944256-4944275 | None:intergenic | 40.0% | |
TTTGAGAACAGCAGGAGTTT+GGG | + | Chr2:4943467-4943486 | None:intergenic | 40.0% | |
! | TCAACAGGTGATCCGTTTTA+TGG | - | Chr2:4943724-4943743 | MsG0280006686.01.T01:intron | 40.0% |
!!! | AAATGCAAGGTTTTGAGGGA+TGG | + | Chr2:4943535-4943554 | None:intergenic | 40.0% |
!!! | CTTTTTTCTCTCTTGGACAG+TGG | - | Chr2:4944001-4944020 | MsG0280006686.01.T01:CDS | 40.0% |
AAATGCCCAATTTCGGTTCC+TGG | - | Chr2:4944051-4944070 | MsG0280006686.01.T01:CDS | 45.0% | |
AACCAAACTGGGCAATGTCA+AGG | + | Chr2:4943689-4943708 | None:intergenic | 45.0% | |
ATACCAGCTCAACCAAGGAA+TGG | - | Chr2:4944028-4944047 | MsG0280006686.01.T01:CDS | 45.0% | |
ATCCTTGACATTGCCCAGTT+TGG | - | Chr2:4943684-4943703 | MsG0280006686.01.T01:CDS | 45.0% | |
CGTCACTCACTTCATTGTTG+GGG | - | Chr2:4943859-4943878 | MsG0280006686.01.T01:CDS | 45.0% | |
GATGAATACCAGCTCAACCA+AGG | - | Chr2:4944023-4944042 | MsG0280006686.01.T01:CDS | 45.0% | |
GCGAACATTGCACAAGAAGA+AGG | - | Chr2:4943655-4943674 | MsG0280006686.01.T01:CDS | 45.0% | |
GTCGTCACTCACTTCATTGT+TGG | - | Chr2:4943857-4943876 | MsG0280006686.01.T01:CDS | 45.0% | |
GTTTGAGAACAGCAGGAGTT+TGG | + | Chr2:4943468-4943487 | None:intergenic | 45.0% | |
TTTCCATTCCTTGGTTGAGC+TGG | + | Chr2:4944034-4944053 | None:intergenic | 45.0% | |
! | TTTGAAGCTTGGGACAGTGA+CGG | + | Chr2:4943903-4943922 | None:intergenic | 45.0% |
ACGCATCCAGGAACCGAAAT+TGG | + | Chr2:4944060-4944079 | None:intergenic | 50.0% | |
AGGTGAGATGAAACGCATCC+AGG | + | Chr2:4944072-4944091 | None:intergenic | 50.0% | |
CACTCACTTCATTGTTGGGG+TGG | - | Chr2:4943862-4943881 | MsG0280006686.01.T01:CDS | 50.0% | |
CGCATCCAGGAACCGAAATT+GGG | + | Chr2:4944059-4944078 | None:intergenic | 50.0% | |
GAAGCTTGGGACAGTGACGG+AGG | + | Chr2:4943900-4943919 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 4943442 | 4944287 | 4943442 | ID=MsG0280006686.01;Name=MsG0280006686.01 |
Chr2 | mRNA | 4943442 | 4944287 | 4943442 | ID=MsG0280006686.01.T01;Parent=MsG0280006686.01;Name=MsG0280006686.01.T01;_AED=0.25;_eAED=0.27;_QI=0|0|0|1|1|1|2|0|254 |
Chr2 | exon | 4943790 | 4944287 | 4943790 | ID=MsG0280006686.01.T01:exon:1869;Parent=MsG0280006686.01.T01 |
Chr2 | exon | 4943442 | 4943708 | 4943442 | ID=MsG0280006686.01.T01:exon:1868;Parent=MsG0280006686.01.T01 |
Chr2 | CDS | 4943790 | 4944287 | 4943790 | ID=MsG0280006686.01.T01:cds;Parent=MsG0280006686.01.T01 |
Chr2 | CDS | 4943442 | 4943708 | 4943442 | ID=MsG0280006686.01.T01:cds;Parent=MsG0280006686.01.T01 |
Gene Sequence |
Protein sequence |