AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032880.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032880.01.T01 MTR_4g039440 55.769 312 123 4 7 314 91 391 9.75e-106 320
MsG0680032880.01.T01 MTR_1g085120 55.769 312 121 6 6 314 153 450 4.36e-105 321
MsG0680032880.01.T01 MTR_1g085120 55.769 312 121 6 6 314 228 525 1.91e-104 322
MsG0680032880.01.T01 MTR_7g055943 53.000 300 123 5 6 299 101 388 2.44e-95 294
MsG0680032880.01.T01 MTR_6g011460 56.055 289 118 3 24 312 119 398 1.10e-94 292
MsG0680032880.01.T01 MTR_6g022500 53.025 281 126 2 21 301 171 445 6.69e-92 287
MsG0680032880.01.T01 MTR_6g022360 50.338 296 134 5 6 299 91 375 2.03e-85 268
MsG0680032880.01.T01 MTR_6g022520 54.480 279 118 3 24 299 8 280 9.27e-85 263
MsG0680032880.01.T01 MTR_1g066830 50.690 290 128 7 25 308 82 362 1.37e-77 247
MsG0680032880.01.T01 MTR_1089s0010 51.370 292 129 7 23 314 80 358 2.05e-77 246
MsG0680032880.01.T01 MTR_6g044572 47.335 319 120 5 19 313 72 366 3.87e-75 241
MsG0680032880.01.T01 MTR_5g058100 50.350 286 131 6 24 307 82 358 1.54e-73 236
MsG0680032880.01.T01 MTR_6g044560 47.335 319 120 5 19 313 248 542 1.20e-72 239
MsG0680032880.01.T01 MTR_5g073420 46.780 295 135 8 22 313 83 358 1.62e-72 234
MsG0680032880.01.T01 MTR_1g085120 54.167 240 96 5 6 242 240 468 7.01e-71 232
MsG0680032880.01.T01 MTR_6g040270 48.110 291 140 6 24 314 81 360 5.99e-70 227
MsG0680032880.01.T01 MTR_5g058000 48.592 284 131 5 25 308 82 350 5.83e-69 224
MsG0680032880.01.T01 MTR_5g076150 50.673 223 82 7 64 264 11 227 1.19e-54 182
MsG0680032880.01.T01 MTR_7g026500 37.377 305 153 8 25 309 88 374 3.59e-42 154
MsG0680032880.01.T01 MTR_0009s0080 38.062 289 156 7 25 301 92 369 4.44e-42 154
MsG0680032880.01.T01 MTR_5g007410 40.000 260 140 7 51 299 121 375 1.83e-41 153
MsG0680032880.01.T01 MTR_5g033200 53.548 155 67 3 159 313 11 160 3.34e-41 145
MsG0680032880.01.T01 MTR_6g033095 40.845 213 66 2 87 299 32 184 1.93e-39 141
MsG0680032880.01.T01 MTR_5g061680 39.676 247 113 7 22 267 83 294 6.26e-39 144
MsG0680032880.01.T01 MTR_1g108820 38.462 273 139 9 54 308 100 361 9.09e-39 145
MsG0680032880.01.T01 MTR_6g045333 37.895 285 159 6 27 301 139 415 1.27e-38 145
MsG0680032880.01.T01 MTR_5g045170 38.996 259 142 7 51 299 106 358 3.36e-38 143
MsG0680032880.01.T01 MTR_3g095630 51.333 150 68 2 150 299 7 151 3.99e-38 137
MsG0680032880.01.T01 MTR_5g073370 41.778 225 118 7 79 299 132 347 1.42e-36 139
MsG0680032880.01.T01 MTR_1377s0010 52.899 138 61 2 169 306 1 134 2.88e-36 130
MsG0680032880.01.T01 MTR_1g108800 41.473 258 128 7 51 299 66 309 3.36e-36 137
MsG0680032880.01.T01 MTR_3g071850 35.294 289 169 7 27 305 102 382 3.57e-36 142
MsG0680032880.01.T01 MTR_5g039470 34.783 276 164 6 27 295 61 327 1.01e-33 129
MsG0680032880.01.T01 MTR_5g054920 43.333 180 86 5 127 299 7 177 2.21e-33 125
MsG0680032880.01.T01 MTR_2g036470 37.367 281 159 9 28 299 91 363 3.05e-32 127
MsG0680032880.01.T01 MTR_5g039490 33.214 280 148 6 27 299 96 343 1.53e-28 116
MsG0680032880.01.T01 MTR_5g045510 35.000 280 147 7 27 299 88 339 1.66e-28 116
MsG0680032880.01.T01 MTR_5g031970 32.450 302 165 9 6 303 61 327 1.28e-27 113
MsG0680032880.01.T01 MTR_5g063950 31.615 291 180 10 26 310 61 338 1.94e-26 110
MsG0680032880.01.T01 MTR_7g088260 31.095 283 178 7 24 300 160 431 1.97e-26 111
MsG0680032880.01.T01 MTR_7g056287 38.496 226 121 7 78 299 128 339 8.65e-26 108
MsG0680032880.01.T01 MTR_7g056277 35.088 285 160 10 21 299 330 595 2.61e-25 109
MsG0680032880.01.T01 MTR_8g070590 83.929 56 9 0 407 462 59 114 3.62e-25 100
MsG0680032880.01.T01 MTR_7g056433 29.236 301 184 9 48 336 102 385 7.16e-25 106
MsG0680032880.01.T01 MTR_1g059860 29.932 294 161 8 51 306 38 324 1.32e-24 104
MsG0680032880.01.T01 MTR_5g008950 31.416 226 142 4 84 304 122 339 1.52e-24 105
MsG0680032880.01.T01 MTR_3g023630 30.114 352 194 11 9 334 42 367 2.37e-24 104
MsG0680032880.01.T01 MTR_5g073340 36.364 242 126 11 43 268 71 300 2.86e-24 103
MsG0680032880.01.T01 MTR_1g108820 36.715 207 105 7 54 242 100 298 6.24e-24 102
MsG0680032880.01.T01 MTR_7g034120 32.095 296 163 11 22 299 5 280 6.44e-24 102
MsG0680032880.01.T01 MTR_5g039450 32.673 303 161 13 6 299 67 335 1.77e-23 101
MsG0680032880.01.T01 MTR_2g007450 31.959 291 155 9 35 299 119 392 3.08e-23 102
MsG0680032880.01.T01 MTR_3g045410 83.929 56 9 0 407 462 96 151 5.08e-23 95.5
MsG0680032880.01.T01 MTR_5g065100 33.110 299 142 13 21 310 76 325 5.59e-23 101
MsG0680032880.01.T01 MTR_3g107160 31.679 262 160 8 50 300 104 357 1.18e-22 99.8
MsG0680032880.01.T01 MTR_1g053025 31.227 269 162 7 48 299 99 361 1.96e-22 99.0
MsG0680032880.01.T01 MTR_7g098510 33.621 232 131 7 79 299 139 358 2.12e-22 99.0
MsG0680032880.01.T01 MTR_3g107100 36.036 222 130 5 84 299 141 356 3.50e-22 98.6
MsG0680032880.01.T01 MTR_2g008310 34.914 232 119 10 84 299 128 343 3.68e-22 98.6
MsG0680032880.01.T01 MTR_0492s0020 29.787 282 171 8 26 300 157 418 3.73e-22 99.0
MsG0680032880.01.T01 MTR_0543s0010 29.787 282 171 8 26 300 157 418 4.82e-22 98.6
MsG0680032880.01.T01 MTR_7g083740 32.524 206 120 4 104 300 143 338 1.48e-21 96.3
MsG0680032880.01.T01 MTR_7g098570 33.182 220 138 5 84 299 146 360 1.95e-21 97.1
MsG0680032880.01.T01 MTR_3g108560 29.110 292 169 10 24 300 89 357 2.36e-21 95.9
MsG0680032880.01.T01 MTR_2g007400 31.164 292 154 13 48 305 108 386 3.41e-21 95.9
MsG0680032880.01.T01 MTR_7g007080 30.739 257 159 8 53 299 106 353 4.19e-21 95.1
MsG0680032880.01.T01 MTR_3g036250 32.683 205 113 5 102 300 153 338 4.99e-21 94.7
MsG0680032880.01.T01 MTR_7g056020 31.600 250 146 8 72 308 115 352 5.12e-21 96.7
MsG0680032880.01.T01 MTR_3g095600 48.696 115 53 3 74 186 103 213 5.60e-21 93.2
MsG0680032880.01.T01 MTR_3g108150 29.969 327 193 14 1 313 66 370 5.98e-21 94.7
MsG0680032880.01.T01 MTR_3g071790 32.620 187 115 3 115 293 19 202 1.60e-20 89.7
MsG0680032880.01.T01 MTR_3g087260 32.143 252 149 8 61 300 184 425 2.47e-20 93.6
MsG0680032880.01.T01 MTR_2g008320 32.143 280 146 13 48 299 136 399 3.67e-20 93.2
MsG0680032880.01.T01 MTR_7g098480 33.182 220 136 6 84 299 144 356 7.16e-20 92.4
MsG0680032880.01.T01 MTR_3g107120 33.333 222 134 7 84 299 151 364 9.44e-20 91.3
MsG0680032880.01.T01 MTR_5g083890 34.156 243 130 9 79 302 146 377 1.93e-19 91.3
MsG0680032880.01.T01 MTR_7g033990 30.151 199 129 4 102 299 162 351 4.54e-19 89.4
MsG0680032880.01.T01 MTR_1g041245 30.351 313 180 15 2 299 65 354 9.36e-19 88.2
MsG0680032880.01.T01 MTR_3g040700 29.153 295 173 11 24 308 112 380 1.93e-18 87.8
MsG0680032880.01.T01 MTR_7g115270 26.774 310 194 9 14 300 71 370 2.32e-18 87.0
MsG0680032880.01.T01 MTR_5g012840 28.198 344 164 12 12 332 26 309 3.46e-18 85.5
MsG0680032880.01.T01 MTR_5g024060 46.465 99 52 1 202 299 80 178 3.76e-18 84.3
MsG0680032880.01.T01 MTR_5g008920 28.897 263 173 7 44 300 97 351 4.63e-18 86.3
MsG0680032880.01.T01 MTR_3g109982 31.276 243 152 7 65 300 209 443 7.14e-18 87.0
MsG0680032880.01.T01 MTR_7g022105 33.333 231 140 6 85 306 175 400 1.54e-17 85.1
MsG0680032880.01.T01 MTR_5g058350 48.936 94 45 1 53 146 79 169 1.54e-17 80.9
MsG0680032880.01.T01 MTR_7g021950 32.510 243 138 8 85 312 174 405 1.77e-17 85.1
MsG0680032880.01.T01 MTR_7g021990 33.061 245 136 9 84 312 173 405 1.97e-17 84.7
MsG0680032880.01.T01 MTR_1g107385 33.333 252 121 12 79 304 170 400 1.97e-17 84.7
MsG0680032880.01.T01 MTR_3g099830 31.381 239 122 9 84 299 127 346 8.96e-17 82.0
MsG0680032880.01.T01 MTR_3g082890 29.508 305 173 12 24 299 163 454 2.79e-16 81.3
MsG0680032880.01.T01 MTR_7g007340 31.746 252 126 11 73 299 99 329 3.64e-16 80.1
MsG0680032880.01.T01 MTR_7g075820 32.857 210 114 8 104 302 176 369 3.97e-16 80.5
MsG0680032880.01.T01 MTR_7g033915 31.868 182 110 6 122 299 162 333 6.77e-16 79.3
MsG0680032880.01.T01 MTR_7g034115 28.435 313 176 14 9 299 65 351 6.83e-16 79.7
MsG0680032880.01.T01 MTR_7g032380 30.736 231 112 9 79 300 134 325 7.22e-16 79.3
MsG0680032880.01.T01 MTR_2g005990 30.292 274 151 9 53 299 107 367 8.91e-16 79.3
MsG0680032880.01.T01 MTR_3g467400 29.389 262 145 10 77 327 136 368 1.05e-15 79.0
MsG0680032880.01.T01 MTR_5g021030 63.265 49 18 0 407 455 60 108 1.32e-15 73.2
MsG0680032880.01.T01 MTR_6g022410 50.000 72 33 1 242 313 17 85 2.50e-15 72.4
MsG0680032880.01.T01 MTR_4g080610 30.769 208 128 5 104 301 126 327 3.29e-15 77.4
MsG0680032880.01.T01 MTR_1g070405 60.784 51 20 0 407 457 61 111 6.90e-15 71.2
MsG0680032880.01.T01 MTR_2g007360 30.126 239 135 9 84 299 115 344 1.04e-14 75.9
MsG0680032880.01.T01 MTR_4g098590 29.851 268 160 8 52 300 97 355 1.89e-14 75.1
MsG0680032880.01.T01 MTR_7g056280 31.383 188 105 7 127 299 368 546 3.80e-14 75.1
MsG0680032880.01.T01 MTR_2g008290 61.224 49 19 0 407 455 60 108 4.33e-14 68.9
MsG0680032880.01.T01 MTR_3g105060 28.125 224 148 5 77 300 135 345 6.84e-14 73.6
MsG0680032880.01.T01 MTR_7g075800 31.734 271 137 11 102 338 175 431 1.66e-13 73.2
MsG0680032880.01.T01 MTR_5g061410 27.434 226 144 5 25 242 54 267 5.54e-13 69.3
MsG0680032880.01.T01 MTR_2g007090 33.010 206 110 6 100 299 83 266 5.83e-13 69.7
MsG0680032880.01.T01 MTR_7g032370 30.172 232 128 10 79 299 112 320 1.64e-12 68.9
MsG0680032880.01.T01 MTR_3g026920 28.099 242 143 8 107 329 179 408 1.81e-12 69.3
MsG0680032880.01.T01 MTR_5g073400 40.179 112 59 4 53 160 26 133 2.11e-12 64.7
MsG0680032880.01.T01 MTR_3g108560 28.017 232 131 9 24 242 89 297 3.95e-12 67.4
MsG0680032880.01.T01 MTR_7g007370 33.654 208 102 10 71 258 83 274 4.78e-12 67.4
MsG0680032880.01.T01 MTR_7g060470 28.000 275 156 9 51 299 101 359 3.70e-11 65.1
MsG0680032880.01.T01 MTR_6g029350 32.275 189 91 9 127 299 3 170 4.92e-11 63.2
MsG0680032880.01.T01 MTR_2g007500 27.083 240 146 7 54 271 95 327 6.74e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032880.01.T01 AT5G56420 24.595 309 177 9 54 313 99 400 1.03e-11 67.0
MsG0680032880.01.T01 AT5G56420 24.595 309 177 9 54 313 99 400 1.03e-11 67.0
MsG0680032880.01.T01 AT5G56420 24.595 309 177 9 54 313 99 400 1.03e-11 67.0
MsG0680032880.01.T01 AT5G56810 27.068 266 145 7 81 299 139 402 1.21e-11 67.0
MsG0680032880.01.T01 AT5G38590 30.333 300 160 9 49 302 90 386 5.25e-11 64.7

Find 75 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATGCATCTTGTTGATA+TGG 0.247654 6:-51857396 None:intergenic
TTCAGTTGATCTTCAGCTTT+TGG 0.256472 6:-51857641 None:intergenic
GTCTTGGCTCATTTCATTGT+TGG 0.295982 6:+51855363 MsG0680032880.01.T01:CDS
TTTCATTTCCAACATGTAAA+TGG 0.301176 6:-51854992 None:intergenic
AAAACGACAGAACCGATAAA+AGG 0.330341 6:-51854732 None:intergenic
ATTGATCTATTGTTTGGTCT+TGG 0.330875 6:+51855347 MsG0680032880.01.T01:CDS
ATTCATATTGATCTATTGTT+TGG 0.338203 6:+51855341 MsG0680032880.01.T01:CDS
TTCTGTCTCTCAGGCACCTC+AGG 0.343211 6:-51861121 None:intergenic
CATAATTCCCAATACAACTA+TGG 0.356776 6:-51861212 None:intergenic
CTAGGGTTAGCTATGAAATA+AGG 0.365609 6:+51861259 MsG0680032880.01.T01:CDS
ACACATTCAAGAACCGAAAT+CGG 0.374698 6:-51855629 None:intergenic
GTGATTGCCATAGTTGTATT+GGG 0.379687 6:+51861205 MsG0680032880.01.T01:CDS
GGAATGGAAGTGCCCGATTT+CGG 0.390590 6:+51855616 MsG0680032880.01.T01:CDS
TCTTGGCTCATTTCATTGTT+GGG 0.396346 6:+51855364 MsG0680032880.01.T01:CDS
TCATGTTTCTCATAATAGAT+AGG 0.400171 6:-51855137 None:intergenic
CCAAATTCTTTATATTGAAA+AGG 0.403466 6:+51855424 MsG0680032880.01.T01:CDS
TGTGATTGCCATAGTTGTAT+TGG 0.405551 6:+51861204 MsG0680032880.01.T01:CDS
AAATAATTCGAGCATTGTTA+AGG 0.410370 6:+51861146 MsG0680032880.01.T01:CDS
AATCGGGCACTTCCATTCCT+TGG 0.412409 6:-51855612 None:intergenic
ATGCTTACCGGGAAACTTCC+CGG 0.415902 6:-51857495 None:intergenic
TGACCTACCGGGAAGTTTCC+CGG 0.433832 6:+51857488 MsG0680032880.01.T01:CDS
GAATTTGGAGCCTGGGAGAA+TGG 0.434880 6:-51855409 None:intergenic
GGGCACTTCCATTCCTTGGA+TGG 0.439519 6:-51855608 None:intergenic
AACTGAATTTGAGAAATTCA+AGG 0.440191 6:+51857657 MsG0680032880.01.T01:CDS
GGCTCATTTCATTGTTGGGA+TGG 0.440446 6:+51855368 MsG0680032880.01.T01:CDS
GTAAAATAGTACATGATTTG+AGG 0.440754 6:-51855661 None:intergenic
AAGGATTTAAACCTTTCTTC+TGG 0.441200 6:-51855173 None:intergenic
GGCACTTCCATTCCTTGGAT+GGG 0.451290 6:-51855607 None:intergenic
AATATAAAGAATTTGGAGCC+TGG 0.454294 6:-51855417 None:intergenic
ACAGTTAAGCGTGCTTGGCT+TGG 0.454601 6:+51857448 MsG0680032880.01.T01:CDS
AAAGGACATCAAAAGATTAG+TGG 0.460334 6:+51857713 MsG0680032880.01.T01:CDS
AACTGCTCTGCCATTCTCCC+AGG 0.460367 6:+51855399 MsG0680032880.01.T01:CDS
CTTCCATTCCTTGGATGGGC+CGG 0.462311 6:-51855603 None:intergenic
TACTAGGATGGGTGACCTAC+CGG 0.465420 6:+51857476 MsG0680032880.01.T01:CDS
ACTCCACAGTTAAGCGTGCT+TGG 0.472033 6:+51857443 MsG0680032880.01.T01:CDS
ATCCTTGACCCTGTCTAAGT+TGG 0.479676 6:+51855190 MsG0680032880.01.T01:CDS
GGCTTGGAGTAGTACTAGGA+TGG 0.480687 6:+51857464 MsG0680032880.01.T01:CDS
TCGCTCTAACCAACTTAGAC+AGG 0.482079 6:-51855199 None:intergenic
ATATAAAGAATTTGGAGCCT+GGG 0.488579 6:-51855416 None:intergenic
AAACTTGACCATTTACATGT+TGG 0.488863 6:+51854984 MsG0680032880.01.T01:CDS
CACATTCAAGAACCGAAATC+GGG 0.490928 6:-51855628 None:intergenic
ACATGCAAATCCTCTAGGTT+GGG 0.492583 6:-51855110 None:intergenic
GAATGATGAATTGATGAAGA+AGG 0.495741 6:+51861171 MsG0680032880.01.T01:CDS
CTTTGACAGTGGAGGAAGAC+CGG 0.504077 6:+51855584 MsG0680032880.01.T01:intron
GGTCAAGTTTGAGAATAACT+AGG 0.506189 6:-51854971 None:intergenic
AACATGCAAATCCTCTAGGT+TGG 0.511601 6:-51855111 None:intergenic
AAAACAATGCACCAGAAGAA+AGG 0.520644 6:+51855162 MsG0680032880.01.T01:CDS
AAGATGCATCTTGTTGATAT+GGG 0.522210 6:-51857395 None:intergenic
GCTTGGCTTGGAGTAGTACT+AGG 0.522233 6:+51857460 MsG0680032880.01.T01:CDS
AGTTTGAGAATAACTAGGGT+TGG 0.528200 6:-51854966 None:intergenic
GTCAAGTTTGAGAATAACTA+GGG 0.530461 6:-51854970 None:intergenic
TTTGAAAGAATCCTCTTGCT+CGG 0.539331 6:-51855294 None:intergenic
TGGTGAGATGGCTTCTGATG+AGG 0.544239 6:-51857621 None:intergenic
TCTCTCTGTATTGCCACACT+TGG 0.556913 6:+51854922 MsG0680032880.01.T01:CDS
AGACCGGCCCATCCAAGGAA+TGG 0.560176 6:+51855600 MsG0680032880.01.T01:CDS
GAGGAAGACCGGCCCATCCA+AGG 0.562886 6:+51855595 MsG0680032880.01.T01:CDS
TTCTGCTTGTCCCAACCTAG+AGG 0.568992 6:+51855100 MsG0680032880.01.T01:CDS
GCGAGTATCAATTCGATGGA+TGG 0.572126 6:+51855218 MsG0680032880.01.T01:CDS
AAATAATAGGCTTCCAAGTG+TGG 0.574375 6:-51854935 None:intergenic
GATCAACATGCAAATCCTCT+AGG 0.584309 6:-51855115 None:intergenic
CCTCATGGATTGAAGCCGCA+AGG 0.586326 6:+51854874 MsG0680032880.01.T01:CDS
ACTAGGATGGGTGACCTACC+GGG 0.587138 6:+51857477 MsG0680032880.01.T01:CDS
ATAAACTGATGTCAAATGCA+AGG 0.588689 6:-51855045 None:intergenic
CATGATTCGAAATTCATCAA+AGG 0.592792 6:+51857695 MsG0680032880.01.T01:CDS
CGCTCTAACCAACTTAGACA+GGG 0.603472 6:-51855198 None:intergenic
TAGAGCGAGTATCAATTCGA+TGG 0.610531 6:+51855214 MsG0680032880.01.T01:CDS
AGAACCGATAAAAGGTGTCA+TGG 0.616011 6:-51854724 None:intergenic
GAAAGAATCCTCTTGCTCGG+TGG 0.640277 6:-51855291 None:intergenic
GCTTGGAGTAGTACTAGGAT+GGG 0.643125 6:+51857465 MsG0680032880.01.T01:CDS
AAGCCAAGCACGCTTAACTG+TGG 0.652551 6:-51857446 None:intergenic
TTACCGGGAAACTTCCCGGT+AGG 0.653286 6:-51857491 None:intergenic
AACCAACTTAGACAGGGTCA+AGG 0.664031 6:-51855192 None:intergenic
GATGAAATTCTTCAACACGA+CGG 0.701187 6:-51854899 None:intergenic
TTCAACACGACGGAGCCTTG+CGG 0.712316 6:-51854889 None:intergenic
CCTTGCGGCTTCAATCCATG+AGG 0.751010 6:-51854874 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAAAAAATCC+AGG - Chr6:51860541-51860560 None:intergenic 10.0%
!! AACAAAAAATAAAAGAAAAA+AGG + Chr6:51860591-51860610 MsG0680032880.01.T01:intron 10.0%
!!! TTTATGATTTAACTTTATAA+TGG + Chr6:51855493-51855512 MsG0680032880.01.T01:intron 10.0%
!! AATAAAAGAAAAAAGGAAAA+TGG + Chr6:51860598-51860617 MsG0680032880.01.T01:intron 15.0%
!! ACTTGTATAATATGTAAATT+AGG + Chr6:51859065-51859084 MsG0680032880.01.T01:intron 15.0%
!! CATATCTTAGAATTTATTAA+TGG - Chr6:51858988-51859007 None:intergenic 15.0%
!! GATTATAATGAAAAATTTCT+TGG - Chr6:51858816-51858835 None:intergenic 15.0%
!! TATCAAGTTAAAATTAGAAT+TGG - Chr6:51855920-51855939 None:intergenic 15.0%
!! TGAAAATGTAGAAAATAATT+TGG - Chr6:51859638-51859657 None:intergenic 15.0%
!! TTAAAAAGTTACATATTAAG+TGG + Chr6:51856998-51857017 MsG0680032880.01.T01:intron 15.0%
!!! AAAAGAGTTATTTTTTTTAG+GGG - Chr6:51860437-51860456 None:intergenic 15.0%
!!! AATAAAACAGTTTTAGAAAA+AGG + Chr6:51855785-51855804 MsG0680032880.01.T01:CDS 15.0%
!!! AATATGTAACTTTTTAACTA+TGG - Chr6:51856995-51857014 None:intergenic 15.0%
!!! GAAAAGAGTTATTTTTTTTA+GGG - Chr6:51860438-51860457 None:intergenic 15.0%
!!! TAAAAAAAATAACTCTTTTC+AGG + Chr6:51860438-51860457 MsG0680032880.01.T01:intron 15.0%
!!! TGAAAAGAGTTATTTTTTTT+AGG - Chr6:51860439-51860458 None:intergenic 15.0%
!!! TTCTAAAAATTGTGTTTTTA+GGG - Chr6:51856810-51856829 None:intergenic 15.0%
!!! TTTCTAAAAATTGTGTTTTT+AGG - Chr6:51856811-51856830 None:intergenic 15.0%
!! AAAATAAAAAAAAATCCAGG+TGG - Chr6:51860538-51860557 None:intergenic 20.0%
!! AAATGTAGAAAATAATTTGG+TGG - Chr6:51859635-51859654 None:intergenic 20.0%
!! AATATATGAGCATAATATCA+AGG + Chr6:51860186-51860205 MsG0680032880.01.T01:intron 20.0%
!! ACAAAACTATGGTTAATATA+TGG - Chr6:51860164-51860183 None:intergenic 20.0%
!! AGGTGTTAAAAATTGTAAAT+TGG + Chr6:51856939-51856958 MsG0680032880.01.T01:intron 20.0%
!! ATATATGAGCATAATATCAA+GGG + Chr6:51860187-51860206 MsG0680032880.01.T01:intron 20.0%
!! ATATTATTGTAAAGAACCTT+AGG + Chr6:51858687-51858706 MsG0680032880.01.T01:intron 20.0%
!! ATTACACAGAAAATTGTTTA+AGG - Chr6:51858263-51858282 None:intergenic 20.0%
!! ATTCATATTGATCTATTGTT+TGG + Chr6:51855341-51855360 MsG0680032880.01.T01:CDS 20.0%
!! CATTGAATAATTAATGTATC+TGG - Chr6:51859944-51859963 None:intergenic 20.0%
!! CCAAATTCTTTATATTGAAA+AGG + Chr6:51855424-51855443 MsG0680032880.01.T01:CDS 20.0%
!! GAAACAAAGAAAAACTTAAA+TGG - Chr6:51859264-51859283 None:intergenic 20.0%
!! GAATCATATCAATCTTTATT+TGG - Chr6:51856621-51856640 None:intergenic 20.0%
!! GTTGGAAAAAGAAAAATAAT+AGG - Chr6:51854951-51854970 None:intergenic 20.0%
!! TATTACATACTCCTTAAAAA+TGG - Chr6:51856077-51856096 None:intergenic 20.0%
!! TCAATTCAAAAAGTCAAAAT+AGG + Chr6:51856726-51856745 MsG0680032880.01.T01:intron 20.0%
!! TCATATATTTGACAAAACTA+TGG - Chr6:51860175-51860194 None:intergenic 20.0%
!! TCTTTACAATAATATCTTGA+AGG - Chr6:51858682-51858701 None:intergenic 20.0%
!! TTACATCTTGAAGATATTAT+TGG - Chr6:51855839-51855858 None:intergenic 20.0%
!! TTATCATACTCTCATATAAA+AGG - Chr6:51859092-51859111 None:intergenic 20.0%
!! TTTAGAAAAAGGTAAGATTA+TGG + Chr6:51855796-51855815 MsG0680032880.01.T01:intron 20.0%
!!! AAAAGGGTATAATATATGTA+AGG + Chr6:51856383-51856402 MsG0680032880.01.T01:intron 20.0%
!!! AAAGAGTTATTTTTTTTAGG+GGG - Chr6:51860436-51860455 None:intergenic 20.0%
!!! AATCGATTCAATTTTCATAT+AGG - Chr6:51856559-51856578 None:intergenic 20.0%
!!! ATCAATACCTTATTTTCTTT+AGG + Chr6:51856191-51856210 MsG0680032880.01.T01:intron 20.0%
!!! CCTTTTCAATATAAAGAATT+TGG - Chr6:51855427-51855446 None:intergenic 20.0%
!!! TAAGCAAAAAACACATTTTT+AGG + Chr6:51859881-51859900 MsG0680032880.01.T01:intron 20.0%
!!! TCTAAAAATTGTGTTTTTAG+GGG - Chr6:51856809-51856828 None:intergenic 20.0%
!!! TTATTTTCTACATTTTCATC+TGG + Chr6:51859640-51859659 MsG0680032880.01.T01:intron 20.0%
!!! TTCTAAAACTGTTTTATTTG+AGG - Chr6:51855783-51855802 None:intergenic 20.0%
! AAAAAAAAGGATGAAGTGAA+TGG - Chr6:51860773-51860792 None:intergenic 25.0%
! AAATTTATCAAAGCTTCACA+AGG - Chr6:51859152-51859171 None:intergenic 25.0%
! AACTATGGTTAATATATGGA+AGG - Chr6:51860160-51860179 None:intergenic 25.0%
! AACTGAATTTGAGAAATTCA+AGG + Chr6:51857657-51857676 MsG0680032880.01.T01:CDS 25.0%
! AGAAAAAAGGAAAATGGAAA+AGG + Chr6:51860604-51860623 MsG0680032880.01.T01:intron 25.0%
! AGAAAACGATTCCAAAAAAA+AGG - Chr6:51860786-51860805 None:intergenic 25.0%
! ATAAATCACGAACAAAGAAA+AGG - Chr6:51860898-51860917 None:intergenic 25.0%
! ATTAAGCCTTAACATTAAGT+CGG - Chr6:51860371-51860390 None:intergenic 25.0%
! CACTAAAAGAAAGAATTGTT+TGG + Chr6:51856025-51856044 MsG0680032880.01.T01:intron 25.0%
! CATAACTTTGACAATATTAG+AGG + Chr6:51859672-51859691 MsG0680032880.01.T01:intron 25.0%
! CTTAAAGATGATTTGAAGAA+AGG - Chr6:51859496-51859515 None:intergenic 25.0%
! GAGTAACAAAGATGAAAAAA+AGG - Chr6:51859845-51859864 None:intergenic 25.0%
! GATTCATACTAAGTATGAAT+TGG + Chr6:51856452-51856471 MsG0680032880.01.T01:intron 25.0%
! GTAAAATAGTACATGATTTG+AGG - Chr6:51855664-51855683 None:intergenic 25.0%
! GTTATCATCAAAACTCTTTA+AGG - Chr6:51856918-51856937 None:intergenic 25.0%
! TAAAGGACCTAAAGAAAATA+AGG - Chr6:51856201-51856220 None:intergenic 25.0%
! TAAATCACGAACAAAGAAAA+GGG - Chr6:51860897-51860916 None:intergenic 25.0%
! TAACAAAGATGAAAAAAAGG+TGG - Chr6:51859842-51859861 None:intergenic 25.0%
! TAATATTTGTTCAAGTGTAC+AGG + Chr6:51856968-51856987 MsG0680032880.01.T01:intron 25.0%
! TATATGAGCATAATATCAAG+GGG + Chr6:51860188-51860207 MsG0680032880.01.T01:intron 25.0%
! TCAAGATGTAAACTTTCATT+CGG + Chr6:51855848-51855867 MsG0680032880.01.T01:intron 25.0%
! TCATGTTTCTCATAATAGAT+AGG - Chr6:51855140-51855159 None:intergenic 25.0%
! TTTAAAAACCTTGCCTATAA+TGG + Chr6:51859170-51859189 MsG0680032880.01.T01:intron 25.0%
! TTTCATTTCCAACATGTAAA+TGG - Chr6:51854995-51855014 None:intergenic 25.0%
!! AAATAATTCGAGCATTGTTA+AGG + Chr6:51861146-51861165 MsG0680032880.01.T01:CDS 25.0%
!! ATTTCAAATTGGTTCTTCAT+AGG + Chr6:51857933-51857952 MsG0680032880.01.T01:intron 25.0%
!! ATTTTCATCTTCATCTTCAT+CGG + Chr6:51860938-51860957 MsG0680032880.01.T01:intron 25.0%
!! TATTTTACACTTAGATGGAT+CGG + Chr6:51855676-51855695 MsG0680032880.01.T01:CDS 25.0%
!! TGTACTATTTTACACTTAGA+TGG + Chr6:51855671-51855690 MsG0680032880.01.T01:CDS 25.0%
!! TTAAGGCTTAATTACACTTT+TGG + Chr6:51860379-51860398 MsG0680032880.01.T01:intron 25.0%
!!! AAAGAGTTTTGATGATAACA+AGG + Chr6:51856919-51856938 MsG0680032880.01.T01:intron 25.0%
!!! AGAAAATGCAATTTTTTAGC+TGG + Chr6:51861092-51861111 MsG0680032880.01.T01:intron 25.0%
!!! AGAATATGTTGCCATTTTTA+AGG + Chr6:51856063-51856082 MsG0680032880.01.T01:intron 25.0%
!!! ATTCACTTCATCCTTTTTTT+TGG + Chr6:51860772-51860791 MsG0680032880.01.T01:intron 25.0%
!!! GATTAAACACTTTTTCTAAG+AGG - Chr6:51856287-51856306 None:intergenic 25.0%
!!! TTGAACTATCTTTTTTGTCT+TGG + Chr6:51859761-51859780 MsG0680032880.01.T01:intron 25.0%
!!! TTTTTAAAAAAATGCCAAGC+TGG + Chr6:51860559-51860578 MsG0680032880.01.T01:intron 25.0%
AAAAGGAAAATGGAAAAGGA+AGG + Chr6:51860608-51860627 MsG0680032880.01.T01:intron 30.0%
AAACTTGACCATTTACATGT+TGG + Chr6:51854984-51855003 MsG0680032880.01.T01:CDS 30.0%
AAAGATAGTTCAACACGAAT+TGG - Chr6:51859754-51859773 None:intergenic 30.0%
AAAGGACATCAAAAGATTAG+TGG + Chr6:51857713-51857732 MsG0680032880.01.T01:CDS 30.0%
AACACTTGATATACAATCAG+AGG - Chr6:51858237-51858256 None:intergenic 30.0%
AAGATGCATCTTGTTGATAT+GGG - Chr6:51857398-51857417 None:intergenic 30.0%
AAGGATTTAAACCTTTCTTC+TGG - Chr6:51855176-51855195 None:intergenic 30.0%
AATGAACAGTGTGTGAAAAA+GGG + Chr6:51856367-51856386 MsG0680032880.01.T01:intron 30.0%
AATGTATCTGGTCACATTTA+AGG - Chr6:51859932-51859951 None:intergenic 30.0%
ACACCCTTATAAAGAAAGTA+AGG - Chr6:51860041-51860060 None:intergenic 30.0%
ACATAGCAAAGACGAATTAT+TGG - Chr6:51856106-51856125 None:intergenic 30.0%
ACATGTTTGGATATCTTTGA+TGG - Chr6:51860276-51860295 None:intergenic 30.0%
ATAAACTGATGTCAAATGCA+AGG - Chr6:51855048-51855067 None:intergenic 30.0%
ATCTGAAGATGTAAAGAGAA+AGG + Chr6:51856304-51856323 MsG0680032880.01.T01:intron 30.0%
ATGAGCAAATAAAGAGCAAA+AGG + Chr6:51857027-51857046 MsG0680032880.01.T01:intron 30.0%
ATGGAAATTGAACAAAGAAG+AGG - Chr6:51860754-51860773 None:intergenic 30.0%
ATGTTGAAGTAGTTTATGAG+TGG - Chr6:51860126-51860145 None:intergenic 30.0%
ATTGATCTATTGTTTGGTCT+TGG + Chr6:51855347-51855366 MsG0680032880.01.T01:CDS 30.0%
ATTGTATCATTCTTTGTCTC+TGG - Chr6:51856760-51856779 None:intergenic 30.0%
CAACATATCTCATGTTATCA+AGG - Chr6:51856871-51856890 None:intergenic 30.0%
CAAGGATTAAAATTGTGTCT+AGG - Chr6:51856853-51856872 None:intergenic 30.0%
CACCCTTATAAAGAAAGTAA+GGG - Chr6:51860040-51860059 None:intergenic 30.0%
CATAATTCCCAATACAACTA+TGG - Chr6:51861215-51861234 None:intergenic 30.0%
CATGATTCGAAATTCATCAA+AGG + Chr6:51857695-51857714 MsG0680032880.01.T01:CDS 30.0%
GAAGGCTTATAAGAATTGTT+AGG + Chr6:51857367-51857386 MsG0680032880.01.T01:intron 30.0%
GAATGATGAATTGATGAAGA+AGG + Chr6:51861171-51861190 MsG0680032880.01.T01:CDS 30.0%
GATTTATCCAGAAACGAAAA+TGG + Chr6:51860911-51860930 MsG0680032880.01.T01:intron 30.0%
GTACTTAATGAGAAAAGACT+TGG + Chr6:51855518-51855537 MsG0680032880.01.T01:intron 30.0%
GTCAAGTTTGAGAATAACTA+GGG - Chr6:51854973-51854992 None:intergenic 30.0%
GTGACTTCTCTAATATGATT+GGG + Chr6:51860244-51860263 MsG0680032880.01.T01:intron 30.0%
GTGGTTGAATAGTACTATAT+GGG + Chr6:51859198-51859217 MsG0680032880.01.T01:intron 30.0%
TAAAGATGTTCCTTCACAAT+GGG + Chr6:51857905-51857924 MsG0680032880.01.T01:intron 30.0%
TAATCAGAATCTAAATGCAG+CGG - Chr6:51858551-51858570 None:intergenic 30.0%
TATCATTCCGAAAGAAGAAA+AGG - Chr6:51859225-51859244 None:intergenic 30.0%
TCAACCACATTATCCATTAT+AGG - Chr6:51859186-51859205 None:intergenic 30.0%
TCATCAAAACCTAAATGAAG+AGG + Chr6:51858763-51858782 MsG0680032880.01.T01:intron 30.0%
TCTGAAGATGTAAAGAGAAA+GGG + Chr6:51856305-51856324 MsG0680032880.01.T01:intron 30.0%
TGAAGATATTATTGGACAAG+AGG - Chr6:51855831-51855850 None:intergenic 30.0%
TGGAAATTGAACAAAGAAGA+GGG - Chr6:51860753-51860772 None:intergenic 30.0%
TGTGACTTCTCTAATATGAT+TGG + Chr6:51860243-51860262 MsG0680032880.01.T01:intron 30.0%
TGTGGTTGAATAGTACTATA+TGG + Chr6:51859197-51859216 MsG0680032880.01.T01:intron 30.0%
TTAAGCCTTAACATTAAGTC+GGG - Chr6:51860370-51860389 None:intergenic 30.0%
TTGATACTTTGAACAGCATA+GGG + Chr6:51855934-51855953 MsG0680032880.01.T01:intron 30.0%
! AAAAATTTCTTGGAAGTGCA+AGG - Chr6:51858806-51858825 None:intergenic 30.0%
! AAAATTTCTTGGAAGTGCAA+GGG - Chr6:51858805-51858824 None:intergenic 30.0%
! AACAAGATGCATCTTCTTTT+CGG + Chr6:51857403-51857422 MsG0680032880.01.T01:CDS 30.0%
! AATATAAAGAATTTGGAGCC+TGG - Chr6:51855420-51855439 None:intergenic 30.0%
! AATGGGAATGGATTTCAAAT+TGG + Chr6:51857922-51857941 MsG0680032880.01.T01:intron 30.0%
! AATTCAACCATTTTCGTTTC+TGG - Chr6:51860921-51860940 None:intergenic 30.0%
! AGATTAGTGGAATTTTGCAA+CGG + Chr6:51857726-51857745 MsG0680032880.01.T01:CDS 30.0%
! ATATAAAGAATTTGGAGCCT+GGG - Chr6:51855419-51855438 None:intergenic 30.0%
! ATTATTTTCTTCTGTCTCTC+AGG - Chr6:51861133-51861152 None:intergenic 30.0%
! ATTTGGTGATTTGGGAATTT+GGG - Chr6:51860689-51860708 None:intergenic 30.0%
! CTAAGAGGACTAGATTTTTA+GGG - Chr6:51856272-51856291 None:intergenic 30.0%
! CTTGATAACATGAGATATGT+TGG + Chr6:51856869-51856888 MsG0680032880.01.T01:intron 30.0%
! GAATCGATTCAAATATGCAT+AGG + Chr6:51856570-51856589 MsG0680032880.01.T01:intron 30.0%
! GTGTTTACATTTTGTACTCA+TGG + Chr6:51858932-51858951 MsG0680032880.01.T01:intron 30.0%
! TCTAAGAGGACTAGATTTTT+AGG - Chr6:51856273-51856292 None:intergenic 30.0%
! TGAGAGTATGATAAAATCGT+TGG + Chr6:51859098-51859117 MsG0680032880.01.T01:intron 30.0%
!! CTACATTTTCATCTGGTTTA+AGG + Chr6:51859647-51859666 MsG0680032880.01.T01:intron 30.0%
!! TCATTTTTGTCTTCTTCTGA+AGG - Chr6:51859340-51859359 None:intergenic 30.0%
!! TTCACTTTTGGTTGCAATTT+TGG + Chr6:51860470-51860489 MsG0680032880.01.T01:intron 30.0%
!!! AACTATCTTTTTTGTCTTGG+TGG + Chr6:51859764-51859783 MsG0680032880.01.T01:intron 30.0%
!!! TACAGTTTTGTTTCTCTCAA+GGG - Chr6:51856237-51856256 None:intergenic 30.0%
!!! TTACAGTTTTGTTTCTCTCA+AGG - Chr6:51856238-51856257 None:intergenic 30.0%
!!! TTTTTCTTTGTTTCTGCATG+TGG + Chr6:51859270-51859289 MsG0680032880.01.T01:intron 30.0%
AAAACAATGCACCAGAAGAA+AGG + Chr6:51855162-51855181 MsG0680032880.01.T01:CDS 35.0%
AAAACGACAGAACCGATAAA+AGG - Chr6:51854735-51854754 None:intergenic 35.0%
AAAGGTTTCTTCGCTTGTAT+TGG + Chr6:51859802-51859821 MsG0680032880.01.T01:intron 35.0%
AAATAATAGGCTTCCAAGTG+TGG - Chr6:51854938-51854957 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG - Chr6:51858663-51858682 None:intergenic 35.0%
AATTGTGTCTAGGAGTTTCT+TGG - Chr6:51856843-51856862 None:intergenic 35.0%
ACACATTCAAGAACCGAAAT+CGG - Chr6:51855632-51855651 None:intergenic 35.0%
ACCAACTACAAGTAGAAACA+TGG + Chr6:51860062-51860081 MsG0680032880.01.T01:intron 35.0%
ACGACACAAAGCAATTATAC+TGG - Chr6:51858495-51858514 None:intergenic 35.0%
AGATGTAAAGAGAAAGGGTT+TGG + Chr6:51856310-51856329 MsG0680032880.01.T01:intron 35.0%
AGCAAAGACGAATTATTGGT+CGG - Chr6:51856102-51856121 None:intergenic 35.0%
AGGTGAGAAAAACACAAGAA+GGG - Chr6:51858662-51858681 None:intergenic 35.0%
AGTGTAGTGAGTAGAACTAT+AGG + Chr6:51855876-51855895 MsG0680032880.01.T01:intron 35.0%
AGTTTGAGAATAACTAGGGT+TGG - Chr6:51854969-51854988 None:intergenic 35.0%
ATGACTTCAAAGTCATGCTT+TGG - Chr6:51859593-51859612 None:intergenic 35.0%
ATTGTGTCTAGGAGTTTCTT+GGG - Chr6:51856842-51856861 None:intergenic 35.0%
CAAATCAGGCAAAAGATCAT+TGG + Chr6:51857964-51857983 MsG0680032880.01.T01:intron 35.0%
CAACCAAAAGTGAACTTAAG+GGG - Chr6:51860464-51860483 None:intergenic 35.0%
CACATTATCCATTATAGGCA+AGG - Chr6:51859181-51859200 None:intergenic 35.0%
CGATTCAAATATGCATAGGT+AGG + Chr6:51856574-51856593 MsG0680032880.01.T01:intron 35.0%
CGCCCTTACTTTCTTTATAA+GGG + Chr6:51860035-51860054 MsG0680032880.01.T01:intron 35.0%
CTTGATACTTTGAACAGCAT+AGG + Chr6:51855933-51855952 MsG0680032880.01.T01:intron 35.0%
GAAGATGCATCTTGTTGATA+TGG - Chr6:51857399-51857418 None:intergenic 35.0%
GAATCATGCATCTTTCTCAA+TGG - Chr6:51860348-51860367 None:intergenic 35.0%
GAATGAACAGTGTGTGAAAA+AGG + Chr6:51856366-51856385 MsG0680032880.01.T01:intron 35.0%
GAGATTTAGTAGAGGAACAA+AGG - Chr6:51860722-51860741 None:intergenic 35.0%
GATGAAATTCTTCAACACGA+CGG - Chr6:51854902-51854921 None:intergenic 35.0%
GATGAATCAGAAAACGAAGA+AGG - Chr6:51860864-51860883 None:intergenic 35.0%
GCAACCAAAAGTGAACTTAA+GGG - Chr6:51860465-51860484 None:intergenic 35.0%
GGTCAAGTTTGAGAATAACT+AGG - Chr6:51854974-51854993 None:intergenic 35.0%
GTAAAGATGTTCCTTCACAA+TGG + Chr6:51857904-51857923 MsG0680032880.01.T01:intron 35.0%
GTAGACACAAAACATAGTAG+TGG - Chr6:51857842-51857861 None:intergenic 35.0%
GTGATTGCCATAGTTGTATT+GGG + Chr6:51861205-51861224 MsG0680032880.01.T01:CDS 35.0%
TACTCTTAGTGAAATCTCCT+TGG + Chr6:51858427-51858446 MsG0680032880.01.T01:intron 35.0%
TCATTATCATTGATCCCCAA+TGG - Chr6:51855967-51855986 None:intergenic 35.0%
TCGCCCTTACTTTCTTTATA+AGG + Chr6:51860034-51860053 MsG0680032880.01.T01:intron 35.0%
TCTTGGCTCATTTCATTGTT+GGG + Chr6:51855364-51855383 MsG0680032880.01.T01:CDS 35.0%
TCTTTCACACCTCTATACAA+AGG + Chr6:51858042-51858061 MsG0680032880.01.T01:intron 35.0%
TGAACAAGTCAAAATTGGCT+TGG - Chr6:51860500-51860519 None:intergenic 35.0%
TGAAGATGGAGATTTAGTAG+AGG - Chr6:51860730-51860749 None:intergenic 35.0%
TGATTCCCGACTTAATGTTA+AGG + Chr6:51860362-51860381 MsG0680032880.01.T01:intron 35.0%
TGCAACCAAAAGTGAACTTA+AGG - Chr6:51860466-51860485 None:intergenic 35.0%
TGCTTATAAATGTGACCAGA+GGG + Chr6:51859983-51860002 MsG0680032880.01.T01:intron 35.0%
TGGTGAACAAAAAAGGGTAA+AGG + Chr6:51859784-51859803 MsG0680032880.01.T01:intron 35.0%
TGTGATTGCCATAGTTGTAT+TGG + Chr6:51861204-51861223 MsG0680032880.01.T01:CDS 35.0%
TTAGTAGAGGAACAAAGGAT+TGG - Chr6:51860717-51860736 None:intergenic 35.0%
TTGATTGTGTTCTTGAGCAA+AGG + Chr6:51858332-51858351 MsG0680032880.01.T01:intron 35.0%
TTGCTTATAAATGTGACCAG+AGG + Chr6:51859982-51860001 MsG0680032880.01.T01:intron 35.0%
TTGTGAAGGAACATCTTTAC+AGG - Chr6:51857904-51857923 None:intergenic 35.0%
TTGTTTCATAAAAGCCAGCT+TGG - Chr6:51860576-51860595 None:intergenic 35.0%
TTTCATCTTTGTTACTCCCT+CGG + Chr6:51859848-51859867 MsG0680032880.01.T01:intron 35.0%
TTTGAAAGAATCCTCTTGCT+CGG - Chr6:51855297-51855316 None:intergenic 35.0%
! AAACTTTTCGTCTCATCTGT+TGG + Chr6:51854802-51854821 MsG0680032880.01.T01:CDS 35.0%
! AAGACATGTGCTTGCAATTT+TGG + Chr6:51857767-51857786 MsG0680032880.01.T01:intron 35.0%
! ACAAAACATAGTAGTGGAGA+AGG - Chr6:51857836-51857855 None:intergenic 35.0%
! ACAAAGGATTGGAATGGATT+TGG - Chr6:51860706-51860725 None:intergenic 35.0%
! ACAAGATGCATCTTCTTTTC+GGG + Chr6:51857404-51857423 MsG0680032880.01.T01:CDS 35.0%
! ACCATGTTTCTACTTGTAGT+TGG - Chr6:51860066-51860085 None:intergenic 35.0%
! AGATGAGACGAAAAGTTTTG+AGG - Chr6:51854800-51854819 None:intergenic 35.0%
! AGCGTTGAACAAGTCAAAAT+TGG - Chr6:51860505-51860524 None:intergenic 35.0%
! ATCGCAACTTTTGGATACTT+AGG - Chr6:51860408-51860427 None:intergenic 35.0%
! ATGACCATGACACCTTTTAT+CGG + Chr6:51854720-51854739 MsG0680032880.01.T01:CDS 35.0%
! ATGTCAAATGCAAGGTTTTG+AGG - Chr6:51855040-51855059 None:intergenic 35.0%
! CAATGATCTTTTGCCTGATT+TGG - Chr6:51857966-51857985 None:intergenic 35.0%
! GAACAAGTCAAAATTGGCTT+GGG - Chr6:51860499-51860518 None:intergenic 35.0%
! TATGGGTCCTTTTCTTCTTT+CGG + Chr6:51859215-51859234 MsG0680032880.01.T01:intron 35.0%
! TCGCAACTTTTGGATACTTA+GGG - Chr6:51860407-51860426 None:intergenic 35.0%
! TTCAGTTGATCTTCAGCTTT+TGG - Chr6:51857644-51857663 None:intergenic 35.0%
! TTTGGTGATTTGGGAATTTG+GGG - Chr6:51860688-51860707 None:intergenic 35.0%
! TTTTGCAACGGTCATTTCAA+AGG + Chr6:51857738-51857757 MsG0680032880.01.T01:intron 35.0%
!! AACAAGTCAAAATTGGCTTG+GGG - Chr6:51860498-51860517 None:intergenic 35.0%
!! CTTGCCTATAATGGATAATG+TGG + Chr6:51859179-51859198 MsG0680032880.01.T01:intron 35.0%
!! GATGAGACGAAAAGTTTTGA+GGG - Chr6:51854799-51854818 None:intergenic 35.0%
!! GATTTGGTGATTTGGGAATT+TGG - Chr6:51860690-51860709 None:intergenic 35.0%
!! TCTTGGTGGTGAACAAAAAA+GGG + Chr6:51859778-51859797 MsG0680032880.01.T01:intron 35.0%
!! TGGAATGGATTTGGTGATTT+GGG - Chr6:51860697-51860716 None:intergenic 35.0%
!! TGTCAAATGCAAGGTTTTGA+GGG - Chr6:51855039-51855058 None:intergenic 35.0%
!! TTGGAATGGATTTGGTGATT+TGG - Chr6:51860698-51860717 None:intergenic 35.0%
!!! ATGAGACGAAAAGTTTTGAG+GGG - Chr6:51854798-51854817 None:intergenic 35.0%
!!! CTAGATTTTTAGGGTGCTAT+AGG - Chr6:51856263-51856282 None:intergenic 35.0%
AAAATACCAACTACTCCCTC+TGG - Chr6:51860001-51860020 None:intergenic 40.0%
AAAGCTTCACAAGGACGTTT+CGG - Chr6:51859143-51859162 None:intergenic 40.0%
AACAAAGAAGAGGGTGAAGA+TGG - Chr6:51860744-51860763 None:intergenic 40.0%
AACATGCAAATCCTCTAGGT+TGG - Chr6:51855114-51855133 None:intergenic 40.0%
AACCTTCTTTCGATGCTTCA+AGG - Chr6:51860976-51860995 None:intergenic 40.0%
AAGAAGGTTGTTTGTCACTG+TGG + Chr6:51860987-51861006 MsG0680032880.01.T01:intron 40.0%
ACATCAAGCTATGAACGCAA+AGG - Chr6:51859563-51859582 None:intergenic 40.0%
ACATGCAAATCCTCTAGGTT+GGG - Chr6:51855113-51855132 None:intergenic 40.0%
AGAGGAACAAAGGATTGGAA+TGG - Chr6:51860712-51860731 None:intergenic 40.0%
ATGCAGAACAATTTCAGCAG+AGG - Chr6:51858132-51858151 None:intergenic 40.0%
ATGTTCCTTCACAATGGGAA+TGG + Chr6:51857910-51857929 MsG0680032880.01.T01:intron 40.0%
CACATTCAAGAACCGAAATC+GGG - Chr6:51855631-51855650 None:intergenic 40.0%
CATAGGACAACAACCAAATC+AGG + Chr6:51857950-51857969 MsG0680032880.01.T01:intron 40.0%
CTCCTAAAAACTGAACACAC+TGG - Chr6:51858606-51858625 None:intergenic 40.0%
GAAATCCATTCCCATTGTGA+AGG - Chr6:51857918-51857937 None:intergenic 40.0%
GAACAATTTCAGCAGAGGTT+TGG - Chr6:51858127-51858146 None:intergenic 40.0%
GATAGCGTGAACAGAAATCT+GGG + Chr6:51860098-51860117 MsG0680032880.01.T01:intron 40.0%
GATATCGAAAGCCATGATGT+GGG - Chr6:51857205-51857224 None:intergenic 40.0%
GATCAACATGCAAATCCTCT+AGG - Chr6:51855118-51855137 None:intergenic 40.0%
GGAGTGAAGACTTAGAGATT+TGG + Chr6:51858063-51858082 MsG0680032880.01.T01:intron 40.0%
GGTGAGAAAAACACAAGAAG+GGG - Chr6:51858661-51858680 None:intergenic 40.0%
GTATCCAAAAGTTGCGATTC+AGG + Chr6:51860410-51860429 MsG0680032880.01.T01:intron 40.0%
GTCTTCACTCCTTTGTATAG+AGG - Chr6:51858054-51858073 None:intergenic 40.0%
GTCTTGGCTCATTTCATTGT+TGG + Chr6:51855363-51855382 MsG0680032880.01.T01:CDS 40.0%
GTGAGAAAAACACAAGAAGG+GGG - Chr6:51858660-51858679 None:intergenic 40.0%
GTTAGACACACACACATGTT+TGG - Chr6:51860289-51860308 None:intergenic 40.0%
TACAGGCATAGCTGTTATTC+TGG - Chr6:51857887-51857906 None:intergenic 40.0%
TAGAGCGAGTATCAATTCGA+TGG + Chr6:51855214-51855233 MsG0680032880.01.T01:CDS 40.0%
TAGTAGGAACCGAAACACAT+CGG + Chr6:51857295-51857314 MsG0680032880.01.T01:intron 40.0%
TCAGAAAACGAAGAAGGAGA+TGG - Chr6:51860858-51860877 None:intergenic 40.0%
TCTCATCTTCACAAGGTTCA+GGG - Chr6:51856144-51856163 None:intergenic 40.0%
TGAAGGACACATTAGCATTC+TGG - Chr6:51859373-51859392 None:intergenic 40.0%
TGAGAAAAACACAAGAAGGG+GGG - Chr6:51858659-51858678 None:intergenic 40.0%
TGCTTATAAATGTGACCCGA+GGG - Chr6:51859867-51859886 None:intergenic 40.0%
TTCAAGATTGCTAGTGCGAT+TGG - Chr6:51860218-51860237 None:intergenic 40.0%
TTCATCTTTGTTACTCCCTC+GGG + Chr6:51859849-51859868 MsG0680032880.01.T01:intron 40.0%
TTCTCATCTTCACAAGGTTC+AGG - Chr6:51856145-51856164 None:intergenic 40.0%
TTGCTTATAAATGTGACCCG+AGG - Chr6:51859868-51859887 None:intergenic 40.0%
! AAACATAGTAGTGGAGAAGG+TGG - Chr6:51857833-51857852 None:intergenic 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG + Chr6:51858438-51858457 MsG0680032880.01.T01:intron 40.0%
! ATCTTCAGCTTTTGGTGAGA+TGG - Chr6:51857636-51857655 None:intergenic 40.0%
! ATGTTTTGTGTCTACGCTAC+TGG + Chr6:51857847-51857866 MsG0680032880.01.T01:intron 40.0%
! ATTTTTGACCCCTTTGACAG+TGG + Chr6:51855573-51855592 MsG0680032880.01.T01:intron 40.0%
! CGCAACTTTTGGATACTTAG+GGG - Chr6:51860406-51860425 None:intergenic 40.0%
! CTGAAGTAAGCAAGTTCTGA+AGG - Chr6:51859390-51859409 None:intergenic 40.0%
! GACCAGTGTGTTCAGTTTTT+AGG + Chr6:51858601-51858620 MsG0680032880.01.T01:intron 40.0%
! GCAACTTTTGGATACTTAGG+GGG - Chr6:51860405-51860424 None:intergenic 40.0%
! TGATAGCGTGAACAGAAATC+TGG + Chr6:51860097-51860116 MsG0680032880.01.T01:intron 40.0%
! TGTGGATTGCCTCTTCATTT+AGG - Chr6:51858775-51858794 None:intergenic 40.0%
! TTGGTGATTTGGGAATTTGG+GGG - Chr6:51860687-51860706 None:intergenic 40.0%
! TTTGTTTCTCTCAAGGGTCT+TGG - Chr6:51856231-51856250 None:intergenic 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG + Chr6:51857541-51857560 MsG0680032880.01.T01:intron 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG + Chr6:51857542-51857561 MsG0680032880.01.T01:intron 40.0%
!! ACAAGTCAAAATTGGCTTGG+GGG - Chr6:51860497-51860516 None:intergenic 40.0%
!! AGAACCGATAAAAGGTGTCA+TGG - Chr6:51854727-51854746 None:intergenic 40.0%
!! GGTTGTTTCTCATCTTCACA+AGG - Chr6:51856151-51856170 None:intergenic 40.0%
!! GTCTTGGTGGTGAACAAAAA+AGG + Chr6:51859777-51859796 MsG0680032880.01.T01:intron 40.0%
!! TTCCTTGAAGCATCGAAAGA+AGG + Chr6:51860971-51860990 MsG0680032880.01.T01:intron 40.0%
!! TTTTCGGGAGCTCAATTCAT+AGG + Chr6:51857419-51857438 MsG0680032880.01.T01:CDS 40.0%
!!! AAAGTTTTGAGGGGCTTTGT+TGG - Chr6:51854789-51854808 None:intergenic 40.0%
!!! AAATGCAAGGTTTTGAGGGA+TGG - Chr6:51855035-51855054 None:intergenic 40.0%
!!! ATGTGCATGCTTTTAGCTCT+AGG + Chr6:51861241-51861260 MsG0680032880.01.T01:CDS 40.0%
!!! GAACGCAAAGGAAAGCATTT+TGG - Chr6:51859551-51859570 None:intergenic 40.0%
!!! TGTGCATGCTTTTAGCTCTA+GGG + Chr6:51861242-51861261 MsG0680032880.01.T01:CDS 40.0%
!!! TTTTAGCTGGTTTGATCCTG+AGG + Chr6:51861105-51861124 MsG0680032880.01.T01:intron 40.0%
AAACAACCCCCACAACTCTA+TGG + Chr6:51856163-51856182 MsG0680032880.01.T01:intron 45.0%
AACCAACTTAGACAGGGTCA+AGG - Chr6:51855195-51855214 None:intergenic 45.0%
AACCTTTCGTATCCACCTAG+CGG - Chr6:51857228-51857247 None:intergenic 45.0%
ACAACGACTCTTTGATGTGC+TGG + Chr6:51858004-51858023 MsG0680032880.01.T01:intron 45.0%
ACTTCTTTGCGTCACACAAG+TGG + Chr6:51858871-51858890 MsG0680032880.01.T01:intron 45.0%
AGCATAGGGTGAACTACCAT+TGG + Chr6:51855948-51855967 MsG0680032880.01.T01:intron 45.0%
ATCACCTCCATAGAGTTGTG+GGG - Chr6:51856173-51856192 None:intergenic 45.0%
ATCCTTGACCCTGTCTAAGT+TGG + Chr6:51855190-51855209 MsG0680032880.01.T01:CDS 45.0%
CAAAAAATCCACCGAGCAAG+AGG + Chr6:51855283-51855302 MsG0680032880.01.T01:CDS 45.0%
CACTTTACTCTCTTCAGGAG+CGG - Chr6:51857128-51857147 None:intergenic 45.0%
CATAGGGTGAACTACCATTG+GGG + Chr6:51855950-51855969 MsG0680032880.01.T01:intron 45.0%
CATGCTGAAAAGACTCGTGT+TGG + Chr6:51857534-51857553 MsG0680032880.01.T01:intron 45.0%
CATGTAGTCCCATACCTACA+CGG - Chr6:51857340-51857359 None:intergenic 45.0%
CCTCTCATTCCGATGTGTTT+CGG - Chr6:51857307-51857326 None:intergenic 45.0%
CGAAACACATCGGAATGAGA+GGG + Chr6:51857305-51857324 MsG0680032880.01.T01:intron 45.0%
CGCTCTAACCAACTTAGACA+GGG - Chr6:51855201-51855220 None:intergenic 45.0%
CTCATCTTCACAAGGTTCAG+GGG - Chr6:51856143-51856162 None:intergenic 45.0%
CTTATGGACCTCTTGTCTTC+AGG - Chr6:51857153-51857172 None:intergenic 45.0%
CTTGGACTGACGAAAATCCA+GGG + Chr6:51861033-51861052 MsG0680032880.01.T01:intron 45.0%
GATCACCTCCATAGAGTTGT+GGG - Chr6:51856174-51856193 None:intergenic 45.0%
GCATAGGGTGAACTACCATT+GGG + Chr6:51855949-51855968 MsG0680032880.01.T01:intron 45.0%
GCGAGTATCAATTCGATGGA+TGG + Chr6:51855218-51855237 MsG0680032880.01.T01:CDS 45.0%
GCTTGGAGTAGTACTAGGAT+GGG + Chr6:51857465-51857484 MsG0680032880.01.T01:CDS 45.0%
GGATATCGAAAGCCATGATG+TGG - Chr6:51857206-51857225 None:intergenic 45.0%
GGCTCATTTCATTGTTGGGA+TGG + Chr6:51855368-51855387 MsG0680032880.01.T01:CDS 45.0%
GTATGGGACTACATGGTTGA+AGG + Chr6:51857345-51857364 MsG0680032880.01.T01:intron 45.0%
GTTCAGGGGGATGAAATCTT+CGG - Chr6:51856129-51856148 None:intergenic 45.0%
TAACATCCCAGACTGCTTAC+AGG - Chr6:51857581-51857600 None:intergenic 45.0%
TCATCTTCACAAGGTTCAGG+GGG - Chr6:51856142-51856161 None:intergenic 45.0%
TCGCTCTAACCAACTTAGAC+AGG - Chr6:51855202-51855221 None:intergenic 45.0%
TCGGTTCCTACTATTGTCGT+GGG - Chr6:51857288-51857307 None:intergenic 45.0%
TCTCTCTGTATTGCCACACT+TGG + Chr6:51854922-51854941 MsG0680032880.01.T01:CDS 45.0%
TCTTCATCTTCATCGGTCAG+CGG + Chr6:51860945-51860964 MsG0680032880.01.T01:intron 45.0%
TGATCACCTCCATAGAGTTG+TGG - Chr6:51856175-51856194 None:intergenic 45.0%
TGCAAAGTGTGCTTGAGCAA+AGG + Chr6:51858363-51858382 MsG0680032880.01.T01:intron 45.0%
TTAAACCGTTCCCCTTAGGT+CGG - Chr6:51857252-51857271 None:intergenic 45.0%
TTCGGTTCCTACTATTGTCG+TGG - Chr6:51857289-51857308 None:intergenic 45.0%
! AAAGTGCTCCTGAAGACAAG+AGG + Chr6:51857142-51857161 MsG0680032880.01.T01:intron 45.0%
! AAGTGAGACAGCTTCTGAAG+TGG - Chr6:51858574-51858593 None:intergenic 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG + Chr6:51858439-51858458 MsG0680032880.01.T01:intron 45.0%
! AGGCCCCTTAAGTTCACTTT+TGG + Chr6:51860458-51860477 MsG0680032880.01.T01:intron 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG + Chr6:51858437-51858456 MsG0680032880.01.T01:intron 45.0%
! TCATCGAACGTTTTGCCTCA+TGG + Chr6:51854859-51854878 MsG0680032880.01.T01:CDS 45.0%
! TTCTGATGATGTGGCGCTTA+TGG - Chr6:51857169-51857188 None:intergenic 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG + Chr6:51857543-51857562 MsG0680032880.01.T01:intron 45.0%
!! AGGAGCACTTTACTCTCTTC+AGG - Chr6:51857133-51857152 None:intergenic 45.0%
!! CAAGTCAAAATTGGCTTGGG+GGG - Chr6:51860496-51860515 None:intergenic 45.0%
!! TACTGGTTCCTTCCACAATC+CGG - Chr6:51858478-51858497 None:intergenic 45.0%
!! TGTTGGTTTGTGGGGTTAGT+CGG + Chr6:51857551-51857570 MsG0680032880.01.T01:intron 45.0%
AAACCCTAACTTCCGACCGT+TGG - Chr6:51860658-51860677 None:intergenic 50.0%
AACCCTAACTTCCGACCGTT+GGG - Chr6:51860657-51860676 None:intergenic 50.0%
AAGCCAAGCACGCTTAACTG+TGG - Chr6:51857449-51857468 None:intergenic 50.0%
AAGTGCAAGGGAGATGGTTG+TGG - Chr6:51858793-51858812 None:intergenic 50.0%
AATCCAGGGAGGAGGTTTCA+TGG + Chr6:51861047-51861066 MsG0680032880.01.T01:intron 50.0%
AATCGGGCACTTCCATTCCT+TGG - Chr6:51855615-51855634 None:intergenic 50.0%
ACAGTTAAGCGTGCTTGGCT+TGG + Chr6:51857448-51857467 MsG0680032880.01.T01:CDS 50.0%
ACATCGGAATGAGAGGGATC+CGG + Chr6:51857311-51857330 MsG0680032880.01.T01:intron 50.0%
ACCTTTCGTATCCACCTAGC+GGG - Chr6:51857227-51857246 None:intergenic 50.0%
ACGAAAGGTTCCCGACCTAA+GGG + Chr6:51857238-51857257 MsG0680032880.01.T01:intron 50.0%
ACTCCACAGTTAAGCGTGCT+TGG + Chr6:51857443-51857462 MsG0680032880.01.T01:CDS 50.0%
ACTGGACTACTTCCGGATTG+TGG + Chr6:51858463-51858482 MsG0680032880.01.T01:intron 50.0%
ATGCTTACCGGGAAACTTCC+CGG - Chr6:51857498-51857517 None:intergenic 50.0%
ATGGCTTTCGATATCCCGCT+AGG + Chr6:51857210-51857229 MsG0680032880.01.T01:intron 50.0%
ATGTGACCAGAGGGAGTAGT+TGG + Chr6:51859992-51860011 MsG0680032880.01.T01:intron 50.0%
CCGAAACACATCGGAATGAG+AGG + Chr6:51857304-51857323 MsG0680032880.01.T01:intron 50.0%
CGGTTCCTACTATTGTCGTG+GGG - Chr6:51857287-51857306 None:intergenic 50.0%
CGTGTAGGTATGGGACTACA+TGG + Chr6:51857338-51857357 MsG0680032880.01.T01:intron 50.0%
CTTCATCTTCATCGGTCAGC+GGG + Chr6:51860946-51860965 MsG0680032880.01.T01:intron 50.0%
CTTGCAGTTGTGCTTGAGCA+GGG + Chr6:51858302-51858321 MsG0680032880.01.T01:intron 50.0%
CTTTGACAGTGGAGGAAGAC+CGG + Chr6:51855584-51855603 MsG0680032880.01.T01:intron 50.0%
GAAAGAATCCTCTTGCTCGG+TGG - Chr6:51855294-51855313 None:intergenic 50.0%
GACTACTTCCGGATTGTGGA+AGG + Chr6:51858467-51858486 MsG0680032880.01.T01:intron 50.0%
GAGCAAAGGAAGTCTCTTGC+AGG + Chr6:51858377-51858396 MsG0680032880.01.T01:intron 50.0%
GCTTGGACTGACGAAAATCC+AGG + Chr6:51861032-51861051 MsG0680032880.01.T01:intron 50.0%
GGAGGAGGTTTCATGGTTGT+GGG + Chr6:51861054-51861073 MsG0680032880.01.T01:intron 50.0%
GGCAATCCTGTAAGCAGTCT+GGG + Chr6:51857572-51857591 MsG0680032880.01.T01:intron 50.0%
GGCACTTCCATTCCTTGGAT+GGG - Chr6:51855610-51855629 None:intergenic 50.0%
GGCTTGGAGTAGTACTAGGA+TGG + Chr6:51857464-51857483 MsG0680032880.01.T01:CDS 50.0%
GGGACTACATGGTTGAAGGA+AGG + Chr6:51857349-51857368 MsG0680032880.01.T01:intron 50.0%
GGTCTTCCTCCACTGTCAAA+GGG - Chr6:51855585-51855604 None:intergenic 50.0%
GGTTCCTACTATTGTCGTGG+GGG - Chr6:51857286-51857305 None:intergenic 50.0%
GTCCTCACTCACATGCTTAC+CGG - Chr6:51857510-51857529 None:intergenic 50.0%
GTCTTCCTCCACTGTCAAAG+GGG - Chr6:51855584-51855603 None:intergenic 50.0%
GTTTCTCTCAAGGGTCTTGG+TGG - Chr6:51856228-51856247 None:intergenic 50.0%
TAAACCGTTCCCCTTAGGTC+GGG - Chr6:51857251-51857270 None:intergenic 50.0%
TACGAAAGGTTCCCGACCTA+AGG + Chr6:51857237-51857256 MsG0680032880.01.T01:intron 50.0%
TACTAGGATGGGTGACCTAC+CGG + Chr6:51857476-51857495 MsG0680032880.01.T01:CDS 50.0%
TCACCTCCATAGAGTTGTGG+GGG - Chr6:51856172-51856191 None:intergenic 50.0%
TCAGTCCAAGCAGTGACCAA+CGG - Chr6:51861023-51861042 None:intergenic 50.0%
TCCTCACTCACATGCTTACC+GGG - Chr6:51857509-51857528 None:intergenic 50.0%
TCTTGCAGTTGTGCTTGAGC+AGG + Chr6:51858301-51858320 MsG0680032880.01.T01:intron 50.0%
TGAAGCTTAGACGCTCCTGA+AGG + Chr6:51857062-51857081 MsG0680032880.01.T01:intron 50.0%
TGCGTGTAACACCCACATCA+TGG + Chr6:51857191-51857210 MsG0680032880.01.T01:intron 50.0%
TGGTGAGATGGCTTCTGATG+AGG - Chr6:51857624-51857643 None:intergenic 50.0%
TTCAGGAGCAAGTTGCCTTC+AGG - Chr6:51857080-51857099 None:intergenic 50.0%
TTCAGGAGCGGCTTTACTTC+AGG - Chr6:51857116-51857135 None:intergenic 50.0%
TTCTGCTTGTCCCAACCTAG+AGG + Chr6:51855100-51855119 MsG0680032880.01.T01:CDS 50.0%
TTTGACCCCTTTGACAGTGG+AGG + Chr6:51855576-51855595 MsG0680032880.01.T01:intron 50.0%
! ACACGCAGCTTCTGATGATG+TGG - Chr6:51857178-51857197 None:intergenic 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG + Chr6:51858440-51858459 MsG0680032880.01.T01:intron 50.0%
! ATGGAAAAGGAAGGCACGTG+AGG + Chr6:51860617-51860636 MsG0680032880.01.T01:intron 50.0%
! GAATTTGGAGCCTGGGAGAA+TGG - Chr6:51855412-51855431 None:intergenic 50.0%
! GACTTGTTCAACGCTGACTG+AGG + Chr6:51860510-51860529 MsG0680032880.01.T01:intron 50.0%
! TCTTGGAAGTGCAAGGGAGA+TGG - Chr6:51858799-51858818 None:intergenic 50.0%
!! AGGGTCTTGGTGGTGGATAA+AGG - Chr6:51856218-51856237 None:intergenic 50.0%
!! GCTTGGCTTGGAGTAGTACT+AGG + Chr6:51857460-51857479 MsG0680032880.01.T01:CDS 50.0%
!! GGAATGGAAGTGCCCGATTT+CGG + Chr6:51855616-51855635 MsG0680032880.01.T01:CDS 50.0%
!!! CAGGAGCGCTTTTTCTCTTC+AGG - Chr6:51857097-51857116 None:intergenic 50.0%
AACTGCTCTGCCATTCTCCC+AGG + Chr6:51855399-51855418 MsG0680032880.01.T01:CDS 55.0%
AAGGGGGACTGGACTACTTC+CGG + Chr6:51858456-51858475 MsG0680032880.01.T01:intron 55.0%
AATCCCCGTTGGTCACTGCT+TGG + Chr6:51861015-51861034 MsG0680032880.01.T01:intron 55.0%
ACCCTAACTTCCGACCGTTG+GGG - Chr6:51860656-51860675 None:intergenic 55.0%
ACTAGGATGGGTGACCTACC+GGG + Chr6:51857477-51857496 MsG0680032880.01.T01:CDS 55.0%
AGTCCAAGCAGTGACCAACG+GGG - Chr6:51861021-51861040 None:intergenic 55.0%
CAACCATGAAACCTCCTCCC+TGG - Chr6:51861053-51861072 None:intergenic 55.0%
CAACCCCCACAACTCTATGG+AGG + Chr6:51856166-51856185 MsG0680032880.01.T01:intron 55.0%
CAGTCCAAGCAGTGACCAAC+GGG - Chr6:51861022-51861041 None:intergenic 55.0%
CCTTGCGGCTTCAATCCATG+AGG - Chr6:51854877-51854896 None:intergenic 55.0%
CGAAAGGTTCCCGACCTAAG+GGG + Chr6:51857239-51857258 MsG0680032880.01.T01:intron 55.0%
CGGCAATCCTGTAAGCAGTC+TGG + Chr6:51857571-51857590 MsG0680032880.01.T01:intron 55.0%
CGGCTTAAACCGTTCCCCTT+AGG - Chr6:51857256-51857275 None:intergenic 55.0%
CGGTCTTCCTCCACTGTCAA+AGG - Chr6:51855586-51855605 None:intergenic 55.0%
CTGACGAAAATCCAGGGAGG+AGG + Chr6:51861039-51861058 MsG0680032880.01.T01:intron 55.0%
CTTCCATTCCTTGGATGGGC+CGG - Chr6:51855606-51855625 None:intergenic 55.0%
GCTTTCGATATCCCGCTAGG+TGG + Chr6:51857213-51857232 MsG0680032880.01.T01:intron 55.0%
GGACTGACGAAAATCCAGGG+AGG + Chr6:51861036-51861055 MsG0680032880.01.T01:intron 55.0%
GGGAACGGTTTAAGCCGCAA+GGG + Chr6:51857259-51857278 MsG0680032880.01.T01:intron 55.0%
GGGAGGAGGTTTCATGGTTG+TGG + Chr6:51861053-51861072 MsG0680032880.01.T01:intron 55.0%
GGGCACTTCCATTCCTTGGA+TGG - Chr6:51855611-51855630 None:intergenic 55.0%
TCCCGCTAGGTGGATACGAA+AGG + Chr6:51857223-51857242 MsG0680032880.01.T01:intron 55.0%
TCCCGGTAAGCATGTGAGTG+AGG + Chr6:51857505-51857524 MsG0680032880.01.T01:intron 55.0%
TCTCTCAAGGGTCTTGGTGG+TGG - Chr6:51856225-51856244 None:intergenic 55.0%
TGACCTACCGGGAAGTTTCC+CGG + Chr6:51857488-51857507 MsG0680032880.01.T01:CDS 55.0%
TTACCGGGAAACTTCCCGGT+AGG - Chr6:51857494-51857513 None:intergenic 55.0%
TTCAACACGACGGAGCCTTG+CGG - Chr6:51854892-51854911 None:intergenic 55.0%
TTCTGTCTCTCAGGCACCTC+AGG - Chr6:51861124-51861143 None:intergenic 55.0%
! CCTCATGGATTGAAGCCGCA+AGG + Chr6:51854874-51854893 MsG0680032880.01.T01:CDS 55.0%
! CTGTGGTGTTGAATCCCCGT+TGG + Chr6:51861004-51861023 MsG0680032880.01.T01:intron 55.0%
! GGGGCCTGAATCGCAACTTT+TGG - Chr6:51860417-51860436 None:intergenic 55.0%
! TTTTTCCCTCCCCCAACGGT+CGG + Chr6:51860643-51860662 MsG0680032880.01.T01:intron 55.0%
!!! GTGCTTTTTCCCTCCCCCAA+CGG + Chr6:51860639-51860658 MsG0680032880.01.T01:intron 55.0%
AACTTCCGACCGTTGGGGGA+GGG - Chr6:51860651-51860670 None:intergenic 60.0%
AGACCGGCCCATCCAAGGAA+TGG + Chr6:51855600-51855619 MsG0680032880.01.T01:CDS 60.0%
ATCCGGAGGCCGTGTAGGTA+TGG + Chr6:51857328-51857347 MsG0680032880.01.T01:intron 60.0%
ATTGTCGTGGGGGTCCCTTG+CGG - Chr6:51857276-51857295 None:intergenic 60.0%
CAGTCCCCCTTGCACTTCCA+AGG - Chr6:51858447-51858466 None:intergenic 60.0%
CCCCCAACGGTCGGAAGTTA+GGG + Chr6:51860652-51860671 MsG0680032880.01.T01:intron 60.0%
CCCTAACTTCCGACCGTTGG+GGG - Chr6:51860655-51860674 None:intergenic 60.0%
GGGACCCCCACGACAATAGT+AGG + Chr6:51857279-51857298 MsG0680032880.01.T01:intron 60.0%
GGGGAACGGTTTAAGCCGCA+AGG + Chr6:51857258-51857277 MsG0680032880.01.T01:intron 60.0%
GGTTCCCGACCTAAGGGGAA+CGG + Chr6:51857244-51857263 MsG0680032880.01.T01:intron 60.0%
TAACTTCCGACCGTTGGGGG+AGG - Chr6:51860652-51860671 None:intergenic 60.0%
TCCCATACCTACACGGCCTC+CGG - Chr6:51857333-51857352 None:intergenic 60.0%
TCCCCCAACGGTCGGAAGTT+AGG + Chr6:51860651-51860670 MsG0680032880.01.T01:intron 60.0%
TCCGGAGGCCGTGTAGGTAT+GGG + Chr6:51857329-51857348 MsG0680032880.01.T01:intron 60.0%
TCGGAATGAGAGGGATCCGG+AGG + Chr6:51857314-51857333 MsG0680032880.01.T01:intron 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG + Chr6:51858445-51858464 MsG0680032880.01.T01:intron 60.0%
GAGGAAGACCGGCCCATCCA+AGG + Chr6:51855595-51855614 MsG0680032880.01.T01:CDS 65.0%
GAGGGATCCGGAGGCCGTGT+AGG + Chr6:51857323-51857342 MsG0680032880.01.T01:intron 70.0%
! ACGCTGACTGAGGCGCCACC+TGG + Chr6:51860520-51860539 MsG0680032880.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 51854720 51861279 51854720 ID=MsG0680032880.01;Name=MsG0680032880.01
Chr6 mRNA 51854720 51861279 51854720 ID=MsG0680032880.01.T01;Parent=MsG0680032880.01;Name=MsG0680032880.01.T01;_AED=0.41;_eAED=0.49;_QI=0|0|0|0.8|1|1|5|0|462
Chr6 exon 51854720 51855445 51854720 ID=MsG0680032880.01.T01:exon:13530;Parent=MsG0680032880.01.T01
Chr6 exon 51855593 51855806 51855593 ID=MsG0680032880.01.T01:exon:13529;Parent=MsG0680032880.01.T01
Chr6 exon 51857389 51857509 51857389 ID=MsG0680032880.01.T01:exon:13528;Parent=MsG0680032880.01.T01
Chr6 exon 51857589 51857747 51857589 ID=MsG0680032880.01.T01:exon:13527;Parent=MsG0680032880.01.T01
Chr6 exon 51861111 51861279 51861111 ID=MsG0680032880.01.T01:exon:13526;Parent=MsG0680032880.01.T01
Chr6 CDS 51854720 51855445 51854720 ID=MsG0680032880.01.T01:cds;Parent=MsG0680032880.01.T01
Chr6 CDS 51855593 51855806 51855593 ID=MsG0680032880.01.T01:cds;Parent=MsG0680032880.01.T01
Chr6 CDS 51857389 51857509 51857389 ID=MsG0680032880.01.T01:cds;Parent=MsG0680032880.01.T01
Chr6 CDS 51857589 51857747 51857589 ID=MsG0680032880.01.T01:cds;Parent=MsG0680032880.01.T01
Chr6 CDS 51861111 51861279 51861111 ID=MsG0680032880.01.T01:cds;Parent=MsG0680032880.01.T01
Gene Sequence

>MsG0680032880.01.T01

ATGACCATGACACCTTTTATCGGTTCTGTCGTTTTGTCGATAATCTCGTGCTCTCTCGATATTCAACCAACAAAGCCCCTCAAAACTTTTCGTCTCATCTGTTGGTTTGATGTAGTCGTCATGCGTGATCGTCAATTCTTCATCGAACGTTTTGCCTCATGGATTGAAGCCGCAAGGCTCCGTCGTGTTGAAGAATTTCATCTCTCTCTGTATTGCCACACTTGGAAGCCTATTATTTTTCTTTTTCCAACCCTAGTTATTCTCAAACTTGACCATTTACATGTTGGAAATGAAACTGCATGTCTTCATCTTCCATCCCTCAAAACCTTGCATTTGACATCAGTTTATTTTGAAAATCACAATGAATTCATAAATTTTCTTTCTGCTTGTCCCAACCTAGAGGATTTGCATGTTGATCCTATCTATTATGAGAAACATGATGAAAACAATGCACCAGAAGAAAGGTTTAAATCCTTGACCCTGTCTAAGTTGGTTAGAGCGAGTATCAATTCGATGGATGGTCTTTTTAATGTTGTTAAGAATGTCGAGTTTCTACGTGTAATCAAAAAATCCACCGAGCAAGAGGATTCTTTCAAAGTCACTGCAGTGTTTCAAAACTTAATTCATATTGATCTATTGTTTGGTCTTGGCTCATTTCATTGTTGGGATGGTGTTGTTGAACTGCTCTGCCATTCTCCCAGGCTCCAAATTCTTTATATTGAAAAGTGGAGGAAGACCGGCCCATCCAAGGAATGGAAGTGCCCGATTTCGGTTCTTGAATGTGTTTCTTCTCACCTCAAATCATGTACTATTTTACACTTAGATGGATCGGCAAGTGATCTTAAATTTGCAATTTATATTTTGCAAAATGCAAGACTTTTACAAGACATGACAATCAGATTTGATATTGACTCCTCAAATAAAACAGTTTTAGAAAAAGGTACTACCCATATCAACAAGATGCATCTTCTTTTCGGGAGCTCAATTCATAGGAACTCCACAGTTAAGCGTGCTTGGCTTGGAGTAGTACTAGGATGGGTGACCTACCGGGAAGTTTCCCGTCTGGGATGTTACACTGCGTTATCAGAAGCTGCCTCATCAGAAGCCATCTCACCAAAAGCTGAAGATCAACTGAATTTGAGAAATTCAAGGATTCAAGAGTTGTGTCATGATTCGAAATTCATCAAAGGACATCAAAAGATTAGTGGAATTTTGCAACGCTGGTTTGATCCTGAGGTGCCTGAGAGACAGAAGAAAATAATTCGAGCATTGTTAAGGAAGAATGATGAATTGATGAAGAAGGAAAGAAGTCTTGTGATTGCCATAGTTGTATTGGGAATTATGTTGTTCATGTGCATGCTTTTAGCTCTAGGGTTAGCTATGAAATAA
Protein sequence

>MsG0680032880.01.T01

MTMTPFIGSVVLSIISCSLDIQPTKPLKTFRLICWFDVVVMRDRQFFIERFASWIEAARLRRVEEFHLSLYCHTWKPIIFLFPTLVILKLDHLHVGNETACLHLPSLKTLHLTSVYFENHNEFINFLSACPNLEDLHVDPIYYEKHDENNAPEERFKSLTLSKLVRASINSMDGLFNVVKNVEFLRVIKKSTEQEDSFKVTAVFQNLIHIDLLFGLGSFHCWDGVVELLCHSPRLQILYIEKWRKTGPSKEWKCPISVLECVSSHLKSCTILHLDGSASDLKFAIYILQNARLLQDMTIRFDIDSSNKTVLEKGTTHINKMHLLFGSSIHRNSTVKRAWLGVVLGWVTYREVSRLGCYTALSEAASSEAISPKAEDQLNLRNSRIQELCHDSKFIKGHQKISGILQRWFDPEVPERQKKIIRALLRKNDELMKKERSLVIAIVVLGIMLFMCMLLALGLAMK*