Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032363.01.T01 | RHN51188.1 | 77.105 | 380 | 81 | 3 | 1 | 378 | 1 | 376 | 0 | 579 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032363.01.T01 | Q8H1R7 | 27.211 | 441 | 229 | 16 | 7 | 379 | 1 | 417 | 4.93E-25 | 108 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032363.01.T01 | A0A396HF04 | 77.105 | 380 | 81 | 3 | 1 | 378 | 1 | 376 | 0.0 | 579 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032363.01.T01 | MTR_1089s0010 | 76.579 | 380 | 83 | 3 | 1 | 378 | 1 | 376 | 0.0 | 574 |
MsG0680032363.01.T01 | MTR_6g040270 | 74.607 | 382 | 93 | 2 | 1 | 380 | 1 | 380 | 0.0 | 561 |
MsG0680032363.01.T01 | MTR_1g066830 | 55.670 | 388 | 158 | 4 | 1 | 378 | 1 | 384 | 3.97e-133 | 386 |
MsG0680032363.01.T01 | MTR_5g058100 | 53.368 | 386 | 167 | 7 | 1 | 378 | 1 | 381 | 3.96e-124 | 363 |
MsG0680032363.01.T01 | MTR_5g058000 | 53.158 | 380 | 168 | 5 | 1 | 378 | 1 | 372 | 2.56e-123 | 361 |
MsG0680032363.01.T01 | MTR_5g073420 | 50.781 | 384 | 175 | 5 | 1 | 379 | 4 | 378 | 1.91e-117 | 346 |
MsG0680032363.01.T01 | MTR_4g039440 | 50.513 | 390 | 172 | 9 | 2 | 378 | 28 | 409 | 1.20e-110 | 330 |
MsG0680032363.01.T01 | MTR_1g085120 | 51.832 | 382 | 168 | 8 | 8 | 378 | 92 | 468 | 6.71e-110 | 330 |
MsG0680032363.01.T01 | MTR_1g085120 | 51.832 | 382 | 168 | 8 | 8 | 378 | 167 | 543 | 4.31e-109 | 330 |
MsG0680032363.01.T01 | MTR_6g022500 | 48.187 | 386 | 174 | 9 | 7 | 378 | 100 | 473 | 2.43e-106 | 321 |
MsG0680032363.01.T01 | MTR_6g011460 | 48.825 | 383 | 176 | 8 | 7 | 378 | 45 | 418 | 1.34e-101 | 307 |
MsG0680032363.01.T01 | MTR_7g055943 | 48.062 | 387 | 179 | 9 | 7 | 378 | 39 | 418 | 7.55e-96 | 293 |
MsG0680032363.01.T01 | MTR_6g044572 | 44.226 | 407 | 170 | 11 | 7 | 378 | 1 | 385 | 4.45e-86 | 266 |
MsG0680032363.01.T01 | MTR_6g044560 | 43.932 | 412 | 174 | 11 | 2 | 378 | 172 | 561 | 4.78e-84 | 266 |
MsG0680032363.01.T01 | MTR_6g022360 | 42.967 | 391 | 183 | 9 | 7 | 381 | 42 | 408 | 6.29e-82 | 256 |
MsG0680032363.01.T01 | MTR_7g026500 | 39.109 | 404 | 206 | 10 | 1 | 380 | 7 | 394 | 7.63e-79 | 248 |
MsG0680032363.01.T01 | MTR_6g045333 | 40.967 | 393 | 208 | 10 | 4 | 378 | 57 | 443 | 9.53e-76 | 241 |
MsG0680032363.01.T01 | MTR_3g095600 | 41.962 | 367 | 135 | 10 | 7 | 372 | 3 | 292 | 9.53e-75 | 234 |
MsG0680032363.01.T01 | MTR_6g022520 | 49.371 | 318 | 138 | 10 | 76 | 378 | 1 | 310 | 1.13e-74 | 234 |
MsG0680032363.01.T01 | MTR_1g108820 | 41.562 | 397 | 199 | 14 | 1 | 378 | 1 | 383 | 3.06e-74 | 236 |
MsG0680032363.01.T01 | MTR_5g061680 | 44.127 | 315 | 148 | 4 | 2 | 313 | 5 | 294 | 6.09e-73 | 230 |
MsG0680032363.01.T01 | MTR_0009s0080 | 39.642 | 391 | 212 | 9 | 1 | 375 | 11 | 393 | 1.02e-69 | 225 |
MsG0680032363.01.T01 | MTR_5g007410 | 37.949 | 390 | 215 | 9 | 10 | 381 | 28 | 408 | 1.11e-69 | 226 |
MsG0680032363.01.T01 | MTR_1g085120 | 48.264 | 288 | 139 | 6 | 8 | 287 | 179 | 464 | 8.66e-69 | 224 |
MsG0680032363.01.T01 | MTR_3g071850 | 37.084 | 391 | 224 | 7 | 4 | 377 | 20 | 405 | 1.08e-67 | 229 |
MsG0680032363.01.T01 | MTR_5g045170 | 37.179 | 390 | 213 | 10 | 10 | 381 | 16 | 391 | 3.33e-63 | 207 |
MsG0680032363.01.T01 | MTR_2g036470 | 38.677 | 393 | 212 | 11 | 8 | 381 | 14 | 396 | 1.08e-62 | 206 |
MsG0680032363.01.T01 | MTR_5g033200 | 60.123 | 163 | 63 | 1 | 212 | 372 | 11 | 173 | 5.94e-62 | 197 |
MsG0680032363.01.T01 | MTR_1377s0010 | 71.014 | 138 | 37 | 1 | 222 | 356 | 1 | 138 | 2.42e-61 | 194 |
MsG0680032363.01.T01 | MTR_5g045510 | 39.221 | 385 | 199 | 12 | 7 | 380 | 11 | 371 | 5.13e-60 | 198 |
MsG0680032363.01.T01 | MTR_1g108800 | 39.848 | 394 | 166 | 12 | 1 | 378 | 1 | 339 | 1.67e-59 | 196 |
MsG0680032363.01.T01 | MTR_5g039450 | 36.061 | 391 | 199 | 11 | 4 | 379 | 2 | 356 | 8.50e-59 | 195 |
MsG0680032363.01.T01 | MTR_5g039490 | 36.951 | 387 | 203 | 12 | 4 | 378 | 16 | 373 | 1.46e-55 | 187 |
MsG0680032363.01.T01 | MTR_5g073370 | 35.659 | 387 | 219 | 12 | 8 | 378 | 5 | 377 | 1.55e-55 | 187 |
MsG0680032363.01.T01 | MTR_5g031970 | 34.430 | 395 | 194 | 10 | 3 | 381 | 11 | 356 | 9.06e-51 | 174 |
MsG0680032363.01.T01 | MTR_1g041245 | 34.615 | 390 | 221 | 15 | 7 | 378 | 10 | 383 | 1.73e-50 | 174 |
MsG0680032363.01.T01 | MTR_5g039470 | 36.336 | 333 | 191 | 8 | 24 | 341 | 1 | 327 | 1.85e-50 | 172 |
MsG0680032363.01.T01 | MTR_5g076150 | 45.622 | 217 | 94 | 4 | 118 | 310 | 11 | 227 | 4.50e-49 | 166 |
MsG0680032363.01.T01 | MTR_3g095640 | 54.217 | 166 | 68 | 4 | 1 | 159 | 11 | 175 | 7.05e-48 | 160 |
MsG0680032363.01.T01 | MTR_2g007450 | 32.783 | 424 | 214 | 14 | 6 | 378 | 14 | 417 | 1.20e-47 | 167 |
MsG0680032363.01.T01 | MTR_2g007400 | 32.512 | 406 | 224 | 12 | 7 | 378 | 11 | 400 | 2.01e-47 | 166 |
MsG0680032363.01.T01 | MTR_7g098510 | 34.091 | 396 | 227 | 13 | 1 | 379 | 11 | 389 | 1.83e-46 | 163 |
MsG0680032363.01.T01 | MTR_1g108820 | 38.585 | 311 | 162 | 11 | 1 | 293 | 1 | 300 | 9.46e-46 | 160 |
MsG0680032363.01.T01 | MTR_3g095630 | 49.143 | 175 | 81 | 4 | 202 | 372 | 6 | 176 | 3.55e-45 | 154 |
MsG0680032363.01.T01 | MTR_5g063950 | 33.505 | 388 | 199 | 12 | 13 | 380 | 13 | 361 | 1.06e-43 | 155 |
MsG0680032363.01.T01 | MTR_3g099830 | 33.750 | 400 | 204 | 13 | 4 | 378 | 8 | 371 | 1.48e-43 | 155 |
MsG0680032363.01.T01 | MTR_7g088260 | 31.795 | 390 | 230 | 15 | 8 | 380 | 91 | 461 | 4.60e-42 | 153 |
MsG0680032363.01.T01 | MTR_7g032380 | 30.491 | 387 | 211 | 14 | 7 | 378 | 10 | 353 | 2.28e-41 | 149 |
MsG0680032363.01.T01 | MTR_0543s0010 | 33.679 | 386 | 223 | 14 | 8 | 381 | 86 | 450 | 1.17e-40 | 149 |
MsG0680032363.01.T01 | MTR_1g107385 | 31.017 | 403 | 232 | 11 | 8 | 378 | 32 | 420 | 1.60e-40 | 148 |
MsG0680032363.01.T01 | MTR_5g083890 | 33.173 | 416 | 220 | 15 | 8 | 381 | 6 | 405 | 3.56e-40 | 149 |
MsG0680032363.01.T01 | MTR_1g053025 | 31.127 | 408 | 227 | 16 | 7 | 380 | 1 | 388 | 9.64e-40 | 145 |
MsG0680032363.01.T01 | MTR_5g065100 | 32.987 | 385 | 184 | 14 | 13 | 376 | 13 | 344 | 1.66e-39 | 146 |
MsG0680032363.01.T01 | MTR_7g115270 | 30.713 | 407 | 227 | 16 | 8 | 378 | 12 | 399 | 2.00e-39 | 145 |
MsG0680032363.01.T01 | MTR_3g105060 | 31.429 | 385 | 228 | 12 | 7 | 380 | 13 | 372 | 2.80e-39 | 144 |
MsG0680032363.01.T01 | MTR_3g107100 | 33.416 | 401 | 235 | 12 | 1 | 378 | 4 | 395 | 6.41e-39 | 144 |
MsG0680032363.01.T01 | MTR_7g075820 | 31.514 | 403 | 227 | 13 | 8 | 378 | 6 | 391 | 7.69e-39 | 143 |
MsG0680032363.01.T01 | MTR_3g036250 | 32.061 | 393 | 217 | 15 | 5 | 378 | 2 | 363 | 1.30e-38 | 142 |
MsG0680032363.01.T01 | MTR_5g008920 | 31.328 | 399 | 228 | 14 | 1 | 378 | 5 | 378 | 3.43e-38 | 141 |
MsG0680032363.01.T01 | MTR_2g008310 | 33.162 | 389 | 222 | 14 | 7 | 378 | 1 | 368 | 3.52e-38 | 141 |
MsG0680032363.01.T01 | MTR_7g056287 | 34.392 | 378 | 230 | 10 | 8 | 378 | 3 | 369 | 5.22e-38 | 140 |
MsG0680032363.01.T01 | MTR_7g098570 | 31.899 | 395 | 229 | 14 | 2 | 376 | 14 | 388 | 1.01e-37 | 142 |
MsG0680032363.01.T01 | MTR_7g033915 | 30.789 | 393 | 211 | 16 | 7 | 378 | 10 | 362 | 1.15e-37 | 139 |
MsG0680032363.01.T01 | MTR_7g056433 | 33.582 | 402 | 223 | 18 | 2 | 380 | 8 | 388 | 1.19e-37 | 140 |
MsG0680032363.01.T01 | MTR_7g033990 | 31.088 | 386 | 231 | 14 | 7 | 375 | 10 | 377 | 1.40e-37 | 140 |
MsG0680032363.01.T01 | MTR_5g073340 | 33.036 | 336 | 167 | 12 | 1 | 314 | 1 | 300 | 1.50e-37 | 137 |
MsG0680032363.01.T01 | MTR_3g107160 | 31.514 | 403 | 220 | 17 | 6 | 380 | 8 | 382 | 2.15e-37 | 139 |
MsG0680032363.01.T01 | MTR_7g034115 | 31.538 | 390 | 220 | 14 | 7 | 373 | 10 | 375 | 2.52e-37 | 139 |
MsG0680032363.01.T01 | MTR_2g005990 | 32.274 | 409 | 225 | 13 | 4 | 378 | 2 | 392 | 3.20e-37 | 139 |
MsG0680032363.01.T01 | MTR_3g023630 | 32.570 | 393 | 230 | 12 | 1 | 379 | 1 | 372 | 4.22e-37 | 138 |
MsG0680032363.01.T01 | MTR_0492s0020 | 33.524 | 349 | 204 | 12 | 8 | 345 | 86 | 417 | 5.62e-37 | 139 |
MsG0680032363.01.T01 | MTR_2g008320 | 30.905 | 398 | 235 | 14 | 4 | 380 | 48 | 426 | 1.06e-36 | 138 |
MsG0680032363.01.T01 | MTR_7g056277 | 34.109 | 387 | 227 | 13 | 4 | 378 | 255 | 625 | 2.84e-36 | 139 |
MsG0680032363.01.T01 | MTR_7g021990 | 30.952 | 378 | 237 | 10 | 8 | 371 | 48 | 415 | 1.67e-35 | 135 |
MsG0680032363.01.T01 | MTR_3g107120 | 31.785 | 409 | 224 | 16 | 4 | 380 | 5 | 390 | 1.74e-35 | 134 |
MsG0680032363.01.T01 | MTR_4g098590 | 31.267 | 371 | 203 | 14 | 10 | 345 | 1 | 354 | 2.25e-35 | 133 |
MsG0680032363.01.T01 | MTR_0571s0010 | 76.471 | 85 | 17 | 2 | 8 | 92 | 32 | 113 | 2.96e-35 | 125 |
MsG0680032363.01.T01 | MTR_5g058350 | 41.262 | 206 | 91 | 2 | 1 | 205 | 1 | 177 | 3.91e-35 | 127 |
MsG0680032363.01.T01 | MTR_7g098480 | 31.959 | 388 | 232 | 14 | 1 | 373 | 11 | 381 | 4.03e-35 | 134 |
MsG0680032363.01.T01 | MTR_7g021950 | 30.952 | 378 | 237 | 10 | 8 | 371 | 48 | 415 | 5.59e-35 | 135 |
MsG0680032363.01.T01 | MTR_5g054920 | 38.119 | 202 | 101 | 4 | 177 | 365 | 3 | 193 | 3.00e-34 | 125 |
MsG0680032363.01.T01 | MTR_7g007080 | 32.010 | 403 | 212 | 17 | 8 | 378 | 4 | 376 | 3.35e-34 | 130 |
MsG0680032363.01.T01 | MTR_3g108560 | 31.969 | 391 | 228 | 13 | 8 | 381 | 20 | 389 | 9.88e-34 | 129 |
MsG0680032363.01.T01 | MTR_5g008950 | 29.427 | 384 | 234 | 12 | 10 | 378 | 1 | 362 | 1.14e-33 | 129 |
MsG0680032363.01.T01 | MTR_7g022105 | 30.914 | 372 | 235 | 9 | 8 | 366 | 49 | 411 | 1.36e-33 | 129 |
MsG0680032363.01.T01 | MTR_3g108150 | 31.078 | 399 | 226 | 13 | 8 | 381 | 13 | 387 | 7.39e-32 | 124 |
MsG0680032363.01.T01 | MTR_3g082890 | 29.808 | 416 | 226 | 17 | 4 | 379 | 93 | 482 | 8.03e-32 | 125 |
MsG0680032363.01.T01 | MTR_2g007360 | 28.784 | 403 | 220 | 11 | 4 | 378 | 8 | 371 | 8.28e-32 | 124 |
MsG0680032363.01.T01 | MTR_7g034110 | 30.871 | 379 | 192 | 13 | 7 | 371 | 10 | 332 | 1.08e-30 | 120 |
MsG0680032363.01.T01 | MTR_3g040700 | 31.143 | 350 | 201 | 15 | 6 | 338 | 41 | 367 | 2.40e-30 | 121 |
MsG0680032363.01.T01 | MTR_7g007340 | 30.256 | 390 | 203 | 15 | 4 | 373 | 9 | 349 | 1.02e-29 | 118 |
MsG0680032363.01.T01 | MTR_7g032370 | 29.101 | 378 | 219 | 17 | 20 | 378 | 2 | 349 | 3.86e-29 | 116 |
MsG0680032363.01.T01 | MTR_1g059860 | 30.645 | 310 | 160 | 10 | 78 | 338 | 8 | 311 | 1.48e-28 | 114 |
MsG0680032363.01.T01 | MTR_6g022390 | 49.593 | 123 | 57 | 1 | 7 | 124 | 4 | 126 | 1.61e-28 | 109 |
MsG0680032363.01.T01 | MTR_7g083740 | 27.806 | 392 | 226 | 13 | 7 | 381 | 16 | 367 | 1.63e-28 | 114 |
MsG0680032363.01.T01 | MTR_7g034120 | 31.429 | 315 | 175 | 14 | 86 | 378 | 10 | 305 | 2.05e-28 | 113 |
MsG0680032363.01.T01 | MTR_7g114710 | 28.822 | 399 | 212 | 15 | 7 | 380 | 12 | 363 | 3.49e-28 | 114 |
MsG0680032363.01.T01 | MTR_7g056430 | 28.165 | 387 | 219 | 14 | 8 | 373 | 9 | 357 | 1.14e-27 | 115 |
MsG0680032363.01.T01 | MTR_7g056420 | 28.165 | 387 | 219 | 14 | 8 | 373 | 9 | 357 | 1.27e-27 | 115 |
MsG0680032363.01.T01 | MTR_3g082890 | 27.594 | 453 | 225 | 17 | 4 | 379 | 13 | 439 | 3.31e-27 | 112 |
MsG0680032363.01.T01 | MTR_7g056020 | 30.711 | 394 | 206 | 16 | 8 | 375 | 16 | 368 | 1.35e-26 | 112 |
MsG0680032363.01.T01 | MTR_3g467400 | 28.141 | 398 | 225 | 12 | 8 | 379 | 3 | 365 | 3.27e-26 | 108 |
MsG0680032363.01.T01 | MTR_7g034090 | 30.000 | 390 | 170 | 17 | 8 | 378 | 4 | 309 | 1.37e-25 | 107 |
MsG0680032363.01.T01 | MTR_5g012840 | 28.571 | 371 | 185 | 13 | 27 | 379 | 8 | 316 | 1.45e-25 | 105 |
MsG0680032363.01.T01 | MTR_7g060470 | 28.495 | 372 | 217 | 12 | 8 | 345 | 3 | 359 | 3.12e-25 | 105 |
MsG0680032363.01.T01 | MTR_6g022410 | 65.000 | 80 | 25 | 1 | 299 | 378 | 28 | 104 | 7.89e-25 | 98.2 |
MsG0680032363.01.T01 | MTR_3g071790 | 34.946 | 186 | 104 | 4 | 169 | 339 | 19 | 202 | 3.34e-24 | 99.4 |
MsG0680032363.01.T01 | MTR_5g024060 | 46.094 | 128 | 54 | 5 | 253 | 373 | 81 | 200 | 5.39e-24 | 100 |
MsG0680032363.01.T01 | MTR_2g007550 | 27.139 | 409 | 174 | 13 | 8 | 380 | 14 | 334 | 5.71e-24 | 101 |
MsG0680032363.01.T01 | MTR_7g056447 | 39.674 | 184 | 101 | 6 | 8 | 188 | 9 | 185 | 6.41e-24 | 100 |
MsG0680032363.01.T01 | MTR_3g087260 | 30.916 | 262 | 159 | 8 | 133 | 381 | 205 | 457 | 8.34e-24 | 102 |
MsG0680032363.01.T01 | MTR_3g087260 | 34.184 | 196 | 99 | 5 | 6 | 196 | 10 | 180 | 1.32e-12 | 69.3 |
MsG0680032363.01.T01 | MTR_6g033095 | 35.874 | 223 | 83 | 4 | 141 | 360 | 32 | 197 | 1.75e-23 | 97.1 |
MsG0680032363.01.T01 | MTR_2g007500 | 26.420 | 352 | 203 | 11 | 4 | 325 | 10 | 335 | 4.17e-23 | 99.4 |
MsG0680032363.01.T01 | MTR_2g007090 | 35.498 | 231 | 113 | 8 | 157 | 378 | 88 | 291 | 5.54e-23 | 98.2 |
MsG0680032363.01.T01 | MTR_7g075800 | 27.407 | 405 | 201 | 19 | 8 | 341 | 9 | 391 | 1.46e-22 | 100 |
MsG0680032363.01.T01 | MTR_7g007370 | 30.027 | 373 | 185 | 13 | 5 | 355 | 14 | 332 | 5.84e-22 | 95.9 |
MsG0680032363.01.T01 | MTR_4g032730 | 25.855 | 468 | 242 | 18 | 3 | 378 | 10 | 464 | 1.36e-20 | 93.6 |
MsG0680032363.01.T01 | MTR_4g080610 | 27.577 | 388 | 221 | 14 | 10 | 381 | 14 | 357 | 1.98e-20 | 92.0 |
MsG0680032363.01.T01 | MTR_3g108560 | 31.399 | 293 | 173 | 10 | 8 | 289 | 20 | 295 | 2.35e-20 | 90.9 |
MsG0680032363.01.T01 | MTR_3g026920 | 27.059 | 425 | 219 | 14 | 8 | 380 | 19 | 404 | 3.06e-20 | 92.0 |
MsG0680032363.01.T01 | MTR_5g061410 | 31.488 | 289 | 157 | 10 | 13 | 291 | 10 | 267 | 3.71e-20 | 89.7 |
MsG0680032363.01.T01 | MTR_8g077460 | 26.601 | 406 | 230 | 18 | 3 | 378 | 5 | 372 | 8.05e-20 | 90.5 |
MsG0680032363.01.T01 | MTR_5g013500 | 27.247 | 356 | 212 | 14 | 47 | 379 | 32 | 363 | 1.92e-19 | 89.0 |
MsG0680032363.01.T01 | MTR_8g467800 | 26.039 | 457 | 238 | 18 | 2 | 378 | 14 | 450 | 5.13e-19 | 88.6 |
MsG0680032363.01.T01 | MTR_3g109982 | 40.314 | 191 | 98 | 6 | 5 | 190 | 10 | 189 | 7.92e-19 | 89.0 |
MsG0680032363.01.T01 | MTR_3g109982 | 31.250 | 256 | 150 | 11 | 133 | 373 | 224 | 468 | 1.22e-17 | 85.1 |
MsG0680032363.01.T01 | MTR_6g029350 | 35.583 | 163 | 81 | 5 | 227 | 378 | 46 | 195 | 1.25e-18 | 84.7 |
MsG0680032363.01.T01 | MTR_3g110010 | 40.314 | 191 | 98 | 6 | 5 | 190 | 10 | 189 | 1.40e-18 | 88.2 |
MsG0680032363.01.T01 | MTR_8g468760 | 29.412 | 442 | 219 | 30 | 2 | 378 | 3 | 416 | 6.75e-18 | 85.1 |
MsG0680032363.01.T01 | MTR_8g070950 | 26.136 | 440 | 241 | 18 | 4 | 378 | 11 | 431 | 4.55e-17 | 82.8 |
MsG0680032363.01.T01 | MTR_8g085430 | 33.333 | 198 | 113 | 8 | 7 | 192 | 10 | 200 | 2.72e-16 | 79.3 |
MsG0680032363.01.T01 | MTR_8g085430 | 35.849 | 106 | 53 | 2 | 275 | 369 | 215 | 316 | 3.88e-11 | 63.9 |
MsG0680032363.01.T01 | MTR_5g044790 | 35.000 | 140 | 54 | 2 | 273 | 378 | 301 | 437 | 4.17e-16 | 79.7 |
MsG0680032363.01.T01 | MTR_5g073400 | 43.802 | 121 | 62 | 4 | 81 | 199 | 2 | 118 | 8.94e-16 | 73.9 |
MsG0680032363.01.T01 | MTR_3g114200 | 33.333 | 144 | 85 | 4 | 8 | 147 | 19 | 155 | 1.52e-15 | 73.9 |
MsG0680032363.01.T01 | MTR_7g056280 | 28.440 | 218 | 127 | 8 | 180 | 380 | 367 | 572 | 4.54e-15 | 77.0 |
MsG0680032363.01.T01 | MTR_8g062270 | 32.367 | 207 | 112 | 9 | 7 | 193 | 15 | 213 | 5.39e-15 | 76.6 |
MsG0680032363.01.T01 | MTR_7g033945 | 34.706 | 170 | 93 | 7 | 7 | 166 | 10 | 171 | 2.14e-14 | 71.2 |
MsG0680032363.01.T01 | MTR_8g467800 | 29.845 | 258 | 146 | 10 | 2 | 238 | 14 | 257 | 5.58e-14 | 72.8 |
MsG0680032363.01.T01 | MTR_4g093690 | 32.227 | 211 | 108 | 8 | 1 | 188 | 1 | 199 | 1.53e-13 | 70.9 |
MsG0680032363.01.T01 | MTR_4g056040 | 24.434 | 442 | 227 | 19 | 5 | 345 | 6 | 441 | 5.29e-13 | 70.5 |
MsG0680032363.01.T01 | MTR_8g467790 | 29.208 | 202 | 118 | 8 | 7 | 192 | 147 | 339 | 9.37e-13 | 69.7 |
MsG0680032363.01.T01 | MTR_5g045700 | 61.364 | 44 | 17 | 0 | 10 | 53 | 15 | 58 | 2.09e-12 | 62.0 |
MsG0680032363.01.T01 | MTR_3g106960 | 28.846 | 208 | 124 | 8 | 187 | 381 | 2 | 198 | 2.96e-12 | 66.2 |
MsG0680032363.01.T01 | MTR_8g058970 | 30.415 | 217 | 122 | 9 | 2 | 191 | 13 | 227 | 3.30e-12 | 68.2 |
MsG0680032363.01.T01 | MTR_3g107940 | 35.385 | 130 | 63 | 4 | 253 | 373 | 88 | 205 | 5.68e-12 | 66.6 |
MsG0680032363.01.T01 | MTR_3g115430 | 31.897 | 116 | 65 | 4 | 271 | 380 | 17 | 124 | 6.75e-12 | 62.8 |
MsG0680032363.01.T01 | MTR_2g020180 | 32.331 | 133 | 74 | 5 | 253 | 380 | 93 | 214 | 8.41e-12 | 64.7 |
MsG0680032363.01.T01 | MTR_8g058965 | 30.660 | 212 | 124 | 8 | 7 | 197 | 12 | 221 | 1.65e-11 | 65.9 |
MsG0680032363.01.T01 | MTR_6g061720 | 50.649 | 77 | 37 | 1 | 1 | 77 | 1 | 76 | 1.66e-11 | 60.1 |
MsG0680032363.01.T01 | MTR_8g014160 | 26.650 | 409 | 241 | 18 | 6 | 379 | 39 | 423 | 3.14e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032363.01.T01 | AT4G26340 | 27.211 | 441 | 229 | 16 | 7 | 379 | 1 | 417 | 5.03e-26 | 108 |
MsG0680032363.01.T01 | AT5G56420 | 27.083 | 432 | 238 | 14 | 8 | 379 | 6 | 420 | 1.79e-23 | 101 |
MsG0680032363.01.T01 | AT5G56420 | 27.083 | 432 | 238 | 14 | 8 | 379 | 6 | 420 | 1.79e-23 | 101 |
MsG0680032363.01.T01 | AT5G56420 | 27.083 | 432 | 238 | 14 | 8 | 379 | 6 | 420 | 1.79e-23 | 101 |
MsG0680032363.01.T01 | AT4G26350 | 26.174 | 447 | 237 | 15 | 7 | 380 | 1 | 427 | 2.48e-23 | 101 |
MsG0680032363.01.T01 | AT3G50710 | 26.651 | 439 | 244 | 13 | 7 | 380 | 1 | 426 | 1.57e-20 | 93.2 |
MsG0680032363.01.T01 | AT5G56690 | 34.848 | 198 | 112 | 6 | 7 | 194 | 1 | 191 | 1.66e-20 | 92.8 |
MsG0680032363.01.T01 | AT3G52680 | 27.540 | 443 | 230 | 19 | 8 | 379 | 21 | 443 | 2.21e-20 | 92.8 |
MsG0680032363.01.T01 | AT5G56440 | 25.223 | 448 | 238 | 19 | 7 | 378 | 1 | 427 | 8.64e-19 | 87.8 |
MsG0680032363.01.T01 | AT5G56560 | 26.328 | 433 | 243 | 14 | 5 | 379 | 2 | 416 | 1.58e-18 | 87.0 |
MsG0680032363.01.T01 | AT5G62970 | 26.464 | 461 | 233 | 18 | 7 | 377 | 1 | 445 | 3.01e-18 | 86.3 |
MsG0680032363.01.T01 | AT5G38590 | 29.975 | 397 | 206 | 14 | 7 | 345 | 1 | 383 | 3.09e-18 | 86.3 |
MsG0680032363.01.T01 | AT4G00320 | 25.956 | 366 | 181 | 12 | 8 | 289 | 13 | 372 | 3.30e-18 | 86.7 |
MsG0680032363.01.T01 | AT5G38570 | 25.935 | 401 | 244 | 14 | 7 | 380 | 1 | 375 | 1.42e-17 | 84.0 |
MsG0680032363.01.T01 | AT3G26922 | 34.375 | 192 | 112 | 5 | 8 | 194 | 14 | 196 | 4.73e-17 | 81.6 |
MsG0680032363.01.T01 | AT3G26922 | 34.375 | 192 | 112 | 5 | 8 | 194 | 14 | 196 | 4.73e-17 | 81.6 |
MsG0680032363.01.T01 | AT1G32375 | 23.434 | 431 | 259 | 13 | 7 | 378 | 1 | 419 | 2.88e-16 | 80.5 |
MsG0680032363.01.T01 | AT1G32375 | 23.434 | 431 | 259 | 13 | 7 | 378 | 1 | 419 | 2.88e-16 | 80.5 |
MsG0680032363.01.T01 | AT1G51370 | 23.725 | 451 | 241 | 19 | 4 | 381 | 15 | 435 | 2.89e-16 | 80.5 |
MsG0680032363.01.T01 | AT5G56370 | 25.513 | 439 | 241 | 16 | 7 | 379 | 1 | 419 | 3.18e-16 | 80.1 |
MsG0680032363.01.T01 | AT5G56370 | 25.513 | 439 | 241 | 16 | 7 | 379 | 1 | 419 | 3.18e-16 | 80.1 |
MsG0680032363.01.T01 | AT4G10400 | 35.079 | 191 | 108 | 6 | 7 | 190 | 1 | 182 | 5.94e-16 | 79.3 |
MsG0680032363.01.T01 | AT4G10400 | 35.079 | 191 | 108 | 6 | 7 | 190 | 1 | 182 | 5.94e-16 | 79.3 |
MsG0680032363.01.T01 | AT4G10400 | 35.079 | 191 | 108 | 6 | 7 | 190 | 1 | 182 | 5.94e-16 | 79.3 |
MsG0680032363.01.T01 | AT4G09920 | 34.392 | 189 | 108 | 6 | 7 | 188 | 1 | 180 | 8.41e-16 | 77.4 |
MsG0680032363.01.T01 | AT4G09920 | 34.392 | 189 | 108 | 6 | 7 | 188 | 1 | 180 | 8.41e-16 | 77.4 |
MsG0680032363.01.T01 | AT4G09920 | 34.392 | 189 | 108 | 6 | 7 | 188 | 1 | 180 | 8.41e-16 | 77.4 |
MsG0680032363.01.T01 | AT5G53840 | 23.476 | 443 | 248 | 16 | 8 | 380 | 18 | 439 | 8.42e-16 | 79.0 |
MsG0680032363.01.T01 | AT4G09920 | 34.392 | 189 | 108 | 6 | 7 | 188 | 1 | 180 | 9.74e-16 | 77.8 |
MsG0680032363.01.T01 | AT4G09920 | 34.392 | 189 | 108 | 6 | 7 | 188 | 1 | 180 | 9.74e-16 | 77.8 |
MsG0680032363.01.T01 | AT5G53635 | 34.359 | 195 | 103 | 9 | 10 | 193 | 2 | 182 | 2.97e-15 | 77.4 |
MsG0680032363.01.T01 | AT4G15060 | 33.493 | 209 | 118 | 9 | 1 | 198 | 19 | 217 | 3.31e-15 | 77.0 |
MsG0680032363.01.T01 | AT2G04230 | 27.152 | 453 | 238 | 17 | 3 | 379 | 8 | 444 | 5.55e-15 | 76.6 |
MsG0680032363.01.T01 | AT5G41840 | 29.224 | 219 | 127 | 7 | 8 | 205 | 14 | 225 | 6.89e-15 | 76.6 |
MsG0680032363.01.T01 | AT1G51370 | 29.954 | 217 | 132 | 7 | 4 | 217 | 15 | 214 | 8.96e-15 | 75.1 |
MsG0680032363.01.T01 | AT1G51370 | 29.954 | 217 | 132 | 7 | 4 | 217 | 15 | 214 | 1.10e-14 | 75.5 |
MsG0680032363.01.T01 | AT4G15060 | 33.659 | 205 | 115 | 9 | 5 | 198 | 169 | 363 | 1.12e-14 | 75.9 |
MsG0680032363.01.T01 | AT5G22670 | 23.163 | 449 | 251 | 12 | 8 | 380 | 11 | 441 | 1.46e-14 | 75.1 |
MsG0680032363.01.T01 | AT3G58980 | 24.837 | 459 | 238 | 19 | 7 | 378 | 1 | 439 | 2.85e-14 | 74.7 |
MsG0680032363.01.T01 | AT5G38386 | 25.831 | 391 | 226 | 14 | 7 | 353 | 1 | 371 | 3.69e-14 | 73.9 |
MsG0680032363.01.T01 | AT5G38386 | 25.831 | 391 | 226 | 14 | 7 | 353 | 1 | 371 | 3.69e-14 | 73.9 |
MsG0680032363.01.T01 | AT5G41830 | 26.431 | 367 | 178 | 15 | 8 | 289 | 13 | 372 | 3.90e-14 | 74.3 |
MsG0680032363.01.T01 | AT5G38590 | 29.483 | 329 | 177 | 14 | 7 | 325 | 1 | 284 | 4.78e-14 | 72.4 |
MsG0680032363.01.T01 | AT1G48400 | 35.323 | 201 | 111 | 10 | 1 | 190 | 3 | 195 | 4.81e-14 | 73.9 |
MsG0680032363.01.T01 | AT1G48400 | 35.294 | 204 | 111 | 11 | 1 | 191 | 3 | 198 | 5.16e-14 | 73.9 |
MsG0680032363.01.T01 | AT5G56380 | 33.981 | 206 | 112 | 7 | 7 | 198 | 1 | 196 | 5.43e-14 | 73.6 |
MsG0680032363.01.T01 | AT5G56380 | 33.981 | 206 | 112 | 7 | 7 | 198 | 1 | 196 | 5.43e-14 | 73.6 |
MsG0680032363.01.T01 | AT3G59240 | 24.318 | 440 | 234 | 17 | 1 | 350 | 1 | 431 | 7.82e-14 | 73.2 |
MsG0680032363.01.T01 | AT5G60610 | 31.606 | 193 | 107 | 6 | 7 | 190 | 1 | 177 | 8.75e-14 | 72.8 |
MsG0680032363.01.T01 | AT5G60610 | 31.606 | 193 | 107 | 6 | 7 | 190 | 1 | 177 | 8.75e-14 | 72.8 |
MsG0680032363.01.T01 | AT4G00315 | 32.995 | 197 | 116 | 6 | 7 | 194 | 1 | 190 | 2.81e-13 | 71.2 |
MsG0680032363.01.T01 | AT1G66290 | 23.725 | 451 | 245 | 14 | 6 | 381 | 27 | 453 | 4.06e-13 | 70.9 |
MsG0680032363.01.T01 | AT3G52680 | 33.990 | 203 | 100 | 9 | 8 | 194 | 21 | 205 | 4.10e-13 | 70.5 |
MsG0680032363.01.T01 | AT5G56410 | 34.562 | 217 | 105 | 8 | 7 | 196 | 1 | 207 | 5.41e-13 | 70.5 |
MsG0680032363.01.T01 | AT3G59190 | 28.472 | 288 | 169 | 11 | 3 | 274 | 7 | 273 | 5.43e-13 | 70.1 |
MsG0680032363.01.T01 | AT3G59190 | 28.826 | 281 | 163 | 11 | 3 | 267 | 7 | 266 | 8.11e-13 | 70.1 |
MsG0680032363.01.T01 | AT4G14103 | 31.658 | 199 | 120 | 8 | 1 | 190 | 1 | 192 | 1.08e-12 | 69.3 |
MsG0680032363.01.T01 | AT4G14103 | 31.658 | 199 | 120 | 8 | 1 | 190 | 1 | 192 | 1.08e-12 | 69.3 |
MsG0680032363.01.T01 | AT3G58860 | 24.609 | 447 | 249 | 18 | 3 | 369 | 2 | 440 | 1.20e-12 | 69.3 |
MsG0680032363.01.T01 | AT3G59000 | 31.944 | 216 | 110 | 8 | 7 | 190 | 1 | 211 | 1.22e-12 | 68.9 |
MsG0680032363.01.T01 | AT4G14103 | 31.658 | 199 | 120 | 8 | 1 | 190 | 1 | 192 | 1.63e-12 | 68.9 |
MsG0680032363.01.T01 | AT1G66310 | 23.438 | 448 | 257 | 16 | 2 | 381 | 13 | 442 | 1.83e-12 | 68.9 |
MsG0680032363.01.T01 | AT4G00160 | 32.474 | 194 | 116 | 5 | 8 | 194 | 16 | 201 | 2.48e-12 | 68.6 |
MsG0680032363.01.T01 | AT3G44080 | 24.548 | 387 | 255 | 13 | 13 | 378 | 12 | 382 | 3.45e-12 | 67.8 |
MsG0680032363.01.T01 | AT5G25850 | 31.250 | 192 | 110 | 6 | 7 | 191 | 19 | 195 | 4.29e-12 | 67.8 |
MsG0680032363.01.T01 | AT5G56400 | 25.994 | 327 | 198 | 13 | 7 | 316 | 32 | 331 | 5.41e-12 | 67.4 |
MsG0680032363.01.T01 | AT5G56370 | 26.786 | 336 | 180 | 13 | 7 | 293 | 1 | 319 | 6.37e-12 | 66.6 |
MsG0680032363.01.T01 | AT3G59160 | 30.213 | 235 | 115 | 9 | 1 | 195 | 1 | 226 | 7.76e-12 | 67.0 |
MsG0680032363.01.T01 | AT5G56810 | 30.583 | 206 | 119 | 5 | 1 | 195 | 8 | 200 | 1.02e-11 | 65.9 |
MsG0680032363.01.T01 | AT4G22280 | 33.505 | 194 | 105 | 8 | 7 | 190 | 1 | 180 | 1.04e-11 | 65.9 |
MsG0680032363.01.T01 | AT1G55660 | 30.256 | 195 | 124 | 4 | 7 | 194 | 52 | 241 | 1.11e-11 | 66.2 |
MsG0680032363.01.T01 | AT4G22280 | 33.505 | 194 | 105 | 8 | 7 | 190 | 1 | 180 | 1.16e-11 | 66.2 |
MsG0680032363.01.T01 | AT5G38390 | 34.000 | 200 | 109 | 8 | 7 | 199 | 1 | 184 | 1.19e-11 | 66.2 |
MsG0680032363.01.T01 | AT5G56810 | 30.583 | 206 | 119 | 5 | 1 | 195 | 8 | 200 | 1.50e-11 | 65.9 |
MsG0680032363.01.T01 | AT3G49150 | 29.434 | 265 | 154 | 11 | 1 | 245 | 9 | 260 | 1.72e-11 | 65.9 |
MsG0680032363.01.T01 | AT1G55660 | 30.256 | 195 | 124 | 4 | 7 | 194 | 52 | 241 | 1.94e-11 | 65.9 |
MsG0680032363.01.T01 | AT2G26030 | 28.417 | 278 | 171 | 13 | 8 | 270 | 4 | 268 | 2.13e-11 | 65.5 |
MsG0680032363.01.T01 | AT2G26030 | 28.417 | 278 | 171 | 13 | 8 | 270 | 4 | 268 | 2.13e-11 | 65.5 |
MsG0680032363.01.T01 | AT3G59210 | 27.100 | 369 | 176 | 16 | 1 | 288 | 1 | 357 | 2.16e-11 | 65.5 |
MsG0680032363.01.T01 | AT3G59210 | 27.100 | 369 | 176 | 16 | 1 | 288 | 1 | 357 | 2.16e-11 | 65.5 |
MsG0680032363.01.T01 | AT3G59210 | 27.100 | 369 | 176 | 16 | 1 | 288 | 1 | 357 | 2.16e-11 | 65.5 |
MsG0680032363.01.T01 | AT3G59210 | 27.100 | 369 | 176 | 16 | 1 | 288 | 1 | 357 | 2.16e-11 | 65.5 |
MsG0680032363.01.T01 | AT3G59210 | 27.100 | 369 | 176 | 16 | 1 | 288 | 1 | 357 | 2.16e-11 | 65.5 |
MsG0680032363.01.T01 | AT2G26030 | 28.417 | 278 | 171 | 13 | 8 | 270 | 4 | 268 | 2.47e-11 | 65.5 |
MsG0680032363.01.T01 | AT3G58880 | 33.846 | 195 | 112 | 6 | 7 | 190 | 2 | 190 | 2.50e-11 | 65.5 |
MsG0680032363.01.T01 | AT5G53640 | 27.273 | 187 | 124 | 4 | 6 | 190 | 20 | 196 | 2.97e-11 | 63.2 |
MsG0680032363.01.T01 | AT5G38392 | 32.673 | 202 | 110 | 7 | 7 | 190 | 1 | 194 | 3.49e-11 | 62.8 |
MsG0680032363.01.T01 | AT5G56560 | 32.461 | 191 | 114 | 6 | 5 | 190 | 2 | 182 | 4.04e-11 | 65.1 |
MsG0680032363.01.T01 | AT3G59170 | 30.769 | 221 | 115 | 9 | 3 | 190 | 2 | 217 | 4.11e-11 | 64.7 |
MsG0680032363.01.T01 | AT3G58960 | 31.088 | 193 | 117 | 6 | 7 | 191 | 1 | 185 | 4.13e-11 | 64.7 |
MsG0680032363.01.T01 | AT3G59000 | 35.000 | 180 | 96 | 6 | 7 | 171 | 1 | 174 | 4.94e-11 | 64.7 |
MsG0680032363.01.T01 | AT3G26922 | 31.250 | 176 | 107 | 5 | 24 | 194 | 1 | 167 | 8.38e-11 | 62.8 |
MsG0680032363.01.T01 | AT3G26922 | 31.250 | 176 | 107 | 5 | 24 | 194 | 1 | 167 | 8.38e-11 | 62.8 |
Find 71 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACACATTCAAGAACCGAATT+TGG | 0.221469 | 6:+39305414 | None:intergenic |
GTCCACAAATGAAATGCTTT+TGG | 0.226586 | 6:-39305265 | MsG0680032363.01.T01:CDS |
CAGTTTGATTGCTTATTTCC+TGG | 0.258978 | 6:-39305612 | MsG0680032363.01.T01:CDS |
GATAAGTCCTCAAATATTCT+AGG | 0.318963 | 6:+39305841 | None:intergenic |
TTCTCAATCTTAGATGGTTA+CGG | 0.346464 | 6:-39305977 | MsG0680032363.01.T01:CDS |
TCCCAAAAGCATTTCATTTG+TGG | 0.350473 | 6:+39305263 | None:intergenic |
TTGATTGCTTATTTCCTGGC+TGG | 0.357883 | 6:-39305608 | MsG0680032363.01.T01:CDS |
GAGAAGCATTAAGAAGTTGT+TGG | 0.359836 | 6:+39305868 | None:intergenic |
AGGTTAATGTGAATTAAGTT+TGG | 0.372111 | 6:+39305636 | None:intergenic |
TAGTTGTTCTCAATCTTAGA+TGG | 0.376236 | 6:-39305983 | MsG0680032363.01.T01:CDS |
ATTTGGCCATTTCCATTCCT+TGG | 0.379178 | 6:+39305431 | None:intergenic |
TCTCAATCTTAGATGGTTAC+GGG | 0.380856 | 6:-39305976 | MsG0680032363.01.T01:CDS |
CTCCTAACCTAGAATATTTG+AGG | 0.400865 | 6:-39305848 | MsG0680032363.01.T01:CDS |
AATAAAAGAATTTGAAGCTT+GGG | 0.404921 | 6:+39305555 | None:intergenic |
TGCTTATTTCCTGGCTGGGA+TGG | 0.421520 | 6:-39305603 | MsG0680032363.01.T01:CDS |
CTCAACACAACGTCGTTTAG+CGG | 0.423991 | 6:+39306067 | None:intergenic |
CAGCTCTAACGAACCTAGCC+AGG | 0.437639 | 6:+39305760 | None:intergenic |
GGAATGGAAATGGCCAAATT+CGG | 0.447115 | 6:-39305427 | MsG0680032363.01.T01:CDS |
GTCCTCAAATATTCTAGGTT+AGG | 0.460447 | 6:+39305846 | None:intergenic |
GCCATTCTTCGCTTCGACTT+CGG | 0.462745 | 6:-39306257 | MsG0680032363.01.T01:CDS |
GGGTCCACCGCTTCGAAAGA+AGG | 0.474674 | 6:+39306297 | None:intergenic |
AAAATCACAGAAACGATTGT+AGG | 0.478241 | 6:+39306208 | None:intergenic |
GCTCATCCAAGGAATGGAAA+TGG | 0.480354 | 6:-39305437 | MsG0680032363.01.T01:CDS |
AAGAATTATCTTCTTGTCCA+AGG | 0.481447 | 6:-39305224 | MsG0680032363.01.T01:CDS |
GCCGAAGTCGAAGCGAAGAA+TGG | 0.486108 | 6:+39306256 | None:intergenic |
TTATTCTGATTCCAACGACT+TGG | 0.491466 | 6:-39306105 | MsG0680032363.01.T01:CDS |
TGATTGCTTATTTCCTGGCT+GGG | 0.493009 | 6:-39305607 | MsG0680032363.01.T01:CDS |
TAAATATAGAACGACATTTG+AGG | 0.493653 | 6:+39306129 | None:intergenic |
AATTGTGTCATTCGAGATGC+GGG | 0.495546 | 6:+39306022 | None:intergenic |
TAATAAAAGAATTTGAAGCT+TGG | 0.497064 | 6:+39305554 | None:intergenic |
GACCCCACTTTGTCACTCAC+TGG | 0.500523 | 6:-39306279 | MsG0680032363.01.T01:CDS |
TTACATGCTGGAGAAATCCT+TGG | 0.502278 | 6:+39305207 | None:intergenic |
TTAATTCCATGTCCCTGGCT+AGG | 0.503532 | 6:-39305773 | MsG0680032363.01.T01:CDS |
TTTGAAGCTTGGGACAATGT+TGG | 0.510964 | 6:+39305565 | None:intergenic |
GGTAGTGAAAGCGATATTGA+TGG | 0.511964 | 6:+39306322 | None:intergenic |
AAAGTTTAATTCCATGTCCC+TGG | 0.512645 | 6:-39305778 | MsG0680032363.01.T01:CDS |
ATTCGAGATGCGGGCAACCA+TGG | 0.517211 | 6:+39306031 | None:intergenic |
GATGGAAGACTCAAAGAAGA+TGG | 0.518291 | 6:-39306399 | MsG0680032363.01.T01:CDS |
TGACAATCGACGTTACTACT+AGG | 0.523992 | 6:-39305287 | MsG0680032363.01.T01:CDS |
GAAATAAGCAATCAAACTGT+AGG | 0.525439 | 6:+39305616 | None:intergenic |
TGAGGAATTTCATCTCTCCA+TGG | 0.525818 | 6:-39306048 | MsG0680032363.01.T01:CDS |
CGCTAAACGACGTTGTGTTG+AGG | 0.526424 | 6:-39306066 | MsG0680032363.01.T01:CDS |
ATGAACAAATCTCAAGCGTA+GGG | 0.535093 | 6:+39305911 | None:intergenic |
AGGTTCGTTAGAGCTGAAAT+CGG | 0.535743 | 6:-39305753 | MsG0680032363.01.T01:CDS |
TACCCATGCATCCAAGTCGT+TGG | 0.537195 | 6:+39306094 | None:intergenic |
AATGAACAAATCTCAAGCGT+AGG | 0.539194 | 6:+39305910 | None:intergenic |
TCTAAGATTGAGAACAACTA+GGG | 0.542157 | 6:+39305986 | None:intergenic |
TTAAAATTGTACATGATCTG+AGG | 0.542287 | 6:+39305382 | None:intergenic |
TGTACTATGCCATCCCAGCC+AGG | 0.552303 | 6:+39305594 | None:intergenic |
CCACCCTTCTTTCGAAGCGG+TGG | 0.560343 | 6:-39306301 | MsG0680032363.01.T01:CDS |
AGGAGTAGAAGTTTACATGC+TGG | 0.563839 | 6:+39305195 | None:intergenic |
ATTCCAACGACTTGGATGCA+TGG | 0.569504 | 6:-39306097 | MsG0680032363.01.T01:CDS |
TTCCAACGACTTGGATGCAT+GGG | 0.569646 | 6:-39306096 | MsG0680032363.01.T01:CDS |
GGTCCACCGCTTCGAAAGAA+GGG | 0.578114 | 6:+39306298 | None:intergenic |
GGTACAGCTCATCCAAGGAA+TGG | 0.579362 | 6:-39305443 | MsG0680032363.01.T01:CDS |
CTACCACCCTTCTTTCGAAG+CGG | 0.585517 | 6:-39306304 | MsG0680032363.01.T01:CDS |
ATGGCCAGTGAGTGACAAAG+TGG | 0.596035 | 6:+39306275 | None:intergenic |
GTAGTGAAAGCGATATTGAT+GGG | 0.603931 | 6:+39306323 | None:intergenic |
ATCTAAGATTGAGAACAACT+AGG | 0.613518 | 6:+39305985 | None:intergenic |
AACGAACCTAGCCAGGGACA+TGG | 0.613760 | 6:+39305767 | None:intergenic |
GGGGAGGTACAGCTCATCCA+AGG | 0.614204 | 6:-39305448 | MsG0680032363.01.T01:CDS |
TGGCCAGTGAGTGACAAAGT+GGG | 0.622054 | 6:+39306276 | None:intergenic |
AAATTGTGTCATTCGAGATG+CGG | 0.625949 | 6:+39306021 | None:intergenic |
ATGAATTGGTTTGACAAACG+AGG | 0.626671 | 6:+39306164 | None:intergenic |
ACAGAAACGATTGTAGGCGG+CGG | 0.638842 | 6:+39306214 | None:intergenic |
GGCCAGTGAGTGACAAAGTG+GGG | 0.642972 | 6:+39306277 | None:intergenic |
AGCTCTAACGAACCTAGCCA+GGG | 0.643302 | 6:+39305761 | None:intergenic |
GTAGGCGGCGGAGTCATGCA+CGG | 0.651767 | 6:+39306226 | None:intergenic |
ATCACAGAAACGATTGTAGG+CGG | 0.674942 | 6:+39306211 | None:intergenic |
GTTGAAGCTGAAAATTTGTG+TGG | 0.697137 | 6:-39305954 | MsG0680032363.01.T01:CDS |
CCACCGCTTCGAAAGAAGGG+TGG | 0.697161 | 6:+39306301 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACATTTTTAACTACATTATA+AGG | + | Chr6:39305875-39305894 | None:intergenic | 15.0% |
!!! | TGTACAATTTTAAAATTTGA+AGG | - | Chr6:39306217-39306236 | MsG0680032363.01.T01:CDS | 15.0% |
!!! | TTCAAATTCTTTTATTAGTA+AGG | - | Chr6:39306041-39306060 | MsG0680032363.01.T01:CDS | 15.0% |
!!! | AATAAAAGAATTTGAAGCTT+GGG | + | Chr6:39306037-39306056 | None:intergenic | 20.0% |
!!! | TAATAAAAGAATTTGAAGCT+TGG | + | Chr6:39306038-39306057 | None:intergenic | 20.0% |
! | AGGTTAATGTGAATTAAGTT+TGG | + | Chr6:39305956-39305975 | None:intergenic | 25.0% |
! | TAAATATAGAACGACATTTG+AGG | + | Chr6:39305463-39305482 | None:intergenic | 25.0% |
! | TTAAAATTGTACATGATCTG+AGG | + | Chr6:39306210-39306229 | None:intergenic | 25.0% |
!!! | GGCTAAATATTTTGATGAAT+TGG | + | Chr6:39305442-39305461 | None:intergenic | 25.0% |
AAAATCACAGAAACGATTGT+AGG | + | Chr6:39305384-39305403 | None:intergenic | 30.0% | |
AAGAATTATCTTCTTGTCCA+AGG | - | Chr6:39306365-39306384 | MsG0680032363.01.T01:CDS | 30.0% | |
GAAATAAGCAATCAAACTGT+AGG | + | Chr6:39305976-39305995 | None:intergenic | 30.0% | |
GATAAGTCCTCAAATATTCT+AGG | + | Chr6:39305751-39305770 | None:intergenic | 30.0% | |
TAGTTGTTCTCAATCTTAGA+TGG | - | Chr6:39305606-39305625 | MsG0680032363.01.T01:CDS | 30.0% | |
TTCTCAATCTTAGATGGTTA+CGG | - | Chr6:39305612-39305631 | MsG0680032363.01.T01:CDS | 30.0% | |
! | ATCTAAGATTGAGAACAACT+AGG | + | Chr6:39305607-39305626 | None:intergenic | 30.0% |
! | TCCACAAATGAAATGCTTTT+GGG | - | Chr6:39306325-39306344 | MsG0680032363.01.T01:CDS | 30.0% |
! | TCTAAGATTGAGAACAACTA+GGG | + | Chr6:39305606-39305625 | None:intergenic | 30.0% |
AAAGTTTAATTCCATGTCCC+TGG | - | Chr6:39305811-39305830 | MsG0680032363.01.T01:CDS | 35.0% | |
AATGAACAAATCTCAAGCGT+AGG | + | Chr6:39305682-39305701 | None:intergenic | 35.0% | |
ACACATTCAAGAACCGAATT+TGG | + | Chr6:39306178-39306197 | None:intergenic | 35.0% | |
ATGAACAAATCTCAAGCGTA+GGG | + | Chr6:39305681-39305700 | None:intergenic | 35.0% | |
CAGTTTGATTGCTTATTTCC+TGG | - | Chr6:39305977-39305996 | MsG0680032363.01.T01:CDS | 35.0% | |
CTCCTAACCTAGAATATTTG+AGG | - | Chr6:39305741-39305760 | MsG0680032363.01.T01:CDS | 35.0% | |
GTAGTGAAAGCGATATTGAT+GGG | + | Chr6:39305269-39305288 | None:intergenic | 35.0% | |
GTCCTCAAATATTCTAGGTT+AGG | + | Chr6:39305746-39305765 | None:intergenic | 35.0% | |
GTTGAAGCTGAAAATTTGTG+TGG | - | Chr6:39305635-39305654 | MsG0680032363.01.T01:CDS | 35.0% | |
TCTCAATCTTAGATGGTTAC+GGG | - | Chr6:39305613-39305632 | MsG0680032363.01.T01:CDS | 35.0% | |
TTATTCTGATTCCAACGACT+TGG | - | Chr6:39305484-39305503 | MsG0680032363.01.T01:intron | 35.0% | |
! | AAATTGTGTCATTCGAGATG+CGG | + | Chr6:39305571-39305590 | None:intergenic | 35.0% |
! | AGTATATTTTGCAGAATGCG+AGG | - | Chr6:39306266-39306285 | MsG0680032363.01.T01:CDS | 35.0% |
! | GTCCACAAATGAAATGCTTT+TGG | - | Chr6:39306324-39306343 | MsG0680032363.01.T01:CDS | 35.0% |
!! | ATGAATTGGTTTGACAAACG+AGG | + | Chr6:39305428-39305447 | None:intergenic | 35.0% |
!! | CAAATGAAATGCTTTTGGGA+AGG | - | Chr6:39306329-39306348 | MsG0680032363.01.T01:CDS | 35.0% |
!! | GAGAAGCATTAAGAAGTTGT+TGG | + | Chr6:39305724-39305743 | None:intergenic | 35.0% |
!! | TCCCAAAAGCATTTCATTTG+TGG | + | Chr6:39306329-39306348 | None:intergenic | 35.0% |
AGGAGTAGAAGTTTACATGC+TGG | + | Chr6:39306397-39306416 | None:intergenic | 40.0% | |
AGGTTCGTTAGAGCTGAAAT+CGG | - | Chr6:39305836-39305855 | MsG0680032363.01.T01:CDS | 40.0% | |
ATCACAGAAACGATTGTAGG+CGG | + | Chr6:39305381-39305400 | None:intergenic | 40.0% | |
ATTTGGCCATTTCCATTCCT+TGG | + | Chr6:39306161-39306180 | None:intergenic | 40.0% | |
GGAATGGAAATGGCCAAATT+CGG | - | Chr6:39306162-39306181 | MsG0680032363.01.T01:CDS | 40.0% | |
GGTAGTGAAAGCGATATTGA+TGG | + | Chr6:39305270-39305289 | None:intergenic | 40.0% | |
TGACAATCGACGTTACTACT+AGG | - | Chr6:39306302-39306321 | MsG0680032363.01.T01:CDS | 40.0% | |
TGAGGAATTTCATCTCTCCA+TGG | - | Chr6:39305541-39305560 | MsG0680032363.01.T01:intron | 40.0% | |
TGATTGCTTATTTCCTGGCT+GGG | - | Chr6:39305982-39306001 | MsG0680032363.01.T01:CDS | 40.0% | |
TTACATGCTGGAGAAATCCT+TGG | + | Chr6:39306385-39306404 | None:intergenic | 40.0% | |
TTGATTGCTTATTTCCTGGC+TGG | - | Chr6:39305981-39306000 | MsG0680032363.01.T01:CDS | 40.0% | |
! | AATTGTGTCATTCGAGATGC+GGG | + | Chr6:39305570-39305589 | None:intergenic | 40.0% |
! | TGCTTTTCATCCCTTTGACA+GGG | - | Chr6:39306121-39306140 | MsG0680032363.01.T01:CDS | 40.0% |
! | TTTGAAGCTTGGGACAATGT+TGG | + | Chr6:39306027-39306046 | None:intergenic | 40.0% |
!! | TTGCTTTTCATCCCTTTGAC+AGG | - | Chr6:39306120-39306139 | MsG0680032363.01.T01:CDS | 40.0% |
CTCAACACAACGTCGTTTAG+CGG | + | Chr6:39305525-39305544 | None:intergenic | 45.0% | |
GCTCATCCAAGGAATGGAAA+TGG | - | Chr6:39306152-39306171 | MsG0680032363.01.T01:CDS | 45.0% | |
TTAATTCCATGTCCCTGGCT+AGG | - | Chr6:39305816-39305835 | MsG0680032363.01.T01:CDS | 45.0% | |
! | ATTCCAACGACTTGGATGCA+TGG | - | Chr6:39305492-39305511 | MsG0680032363.01.T01:intron | 45.0% |
! | GCTTTTCATCCCTTTGACAG+GGG | - | Chr6:39306122-39306141 | MsG0680032363.01.T01:CDS | 45.0% |
! | TTCCAACGACTTGGATGCAT+GGG | - | Chr6:39305493-39305512 | MsG0680032363.01.T01:intron | 45.0% |
ACAGAAACGATTGTAGGCGG+CGG | + | Chr6:39305378-39305397 | None:intergenic | 50.0% | |
ATGGCCAGTGAGTGACAAAG+TGG | + | Chr6:39305317-39305336 | None:intergenic | 50.0% | |
CGCTAAACGACGTTGTGTTG+AGG | - | Chr6:39305523-39305542 | MsG0680032363.01.T01:intron | 50.0% | |
CTACCACCCTTCTTTCGAAG+CGG | - | Chr6:39305285-39305304 | MsG0680032363.01.T01:CDS | 50.0% | |
GCCATTCTTCGCTTCGACTT+CGG | - | Chr6:39305332-39305351 | MsG0680032363.01.T01:CDS | 50.0% | |
GGTACAGCTCATCCAAGGAA+TGG | - | Chr6:39306146-39306165 | MsG0680032363.01.T01:CDS | 50.0% | |
TACCCATGCATCCAAGTCGT+TGG | + | Chr6:39305498-39305517 | None:intergenic | 50.0% | |
TGCTTATTTCCTGGCTGGGA+TGG | - | Chr6:39305986-39306005 | MsG0680032363.01.T01:CDS | 50.0% | |
TGGCCAGTGAGTGACAAAGT+GGG | + | Chr6:39305316-39305335 | None:intergenic | 50.0% | |
TTTCATCCCTTTGACAGGGG+AGG | - | Chr6:39306125-39306144 | MsG0680032363.01.T01:CDS | 50.0% | |
! | AGCTCTAACGAACCTAGCCA+GGG | + | Chr6:39305831-39305850 | None:intergenic | 50.0% |
!!! | AAGCGTAGGGTTTTGAGCGA+CGG | + | Chr6:39305668-39305687 | None:intergenic | 50.0% |
AACGAACCTAGCCAGGGACA+TGG | + | Chr6:39305825-39305844 | None:intergenic | 55.0% | |
AGCTGTACCTCCCCTGTCAA+AGG | + | Chr6:39306135-39306154 | None:intergenic | 55.0% | |
ATTCGAGATGCGGGCAACCA+TGG | + | Chr6:39305561-39305580 | None:intergenic | 55.0% | |
GACCCCACTTTGTCACTCAC+TGG | - | Chr6:39305310-39305329 | MsG0680032363.01.T01:CDS | 55.0% | |
GCCGAAGTCGAAGCGAAGAA+TGG | + | Chr6:39305336-39305355 | None:intergenic | 55.0% | |
GCTGTACCTCCCCTGTCAAA+GGG | + | Chr6:39306134-39306153 | None:intergenic | 55.0% | |
GGCCAGTGAGTGACAAAGTG+GGG | + | Chr6:39305315-39305334 | None:intergenic | 55.0% | |
GGTCCACCGCTTCGAAAGAA+GGG | + | Chr6:39305294-39305313 | None:intergenic | 55.0% | |
TGTACTATGCCATCCCAGCC+AGG | + | Chr6:39305998-39306017 | None:intergenic | 55.0% | |
! | CAGCTCTAACGAACCTAGCC+AGG | + | Chr6:39305832-39305851 | None:intergenic | 55.0% |
CCACCCTTCTTTCGAAGCGG+TGG | - | Chr6:39305288-39305307 | MsG0680032363.01.T01:CDS | 60.0% | |
CCACCGCTTCGAAAGAAGGG+TGG | + | Chr6:39305291-39305310 | None:intergenic | 60.0% | |
GGGTCCACCGCTTCGAAAGA+AGG | + | Chr6:39305295-39305314 | None:intergenic | 60.0% | |
! | GGGGAGGTACAGCTCATCCA+AGG | - | Chr6:39306141-39306160 | MsG0680032363.01.T01:CDS | 60.0% |
GTAGGCGGCGGAGTCATGCA+CGG | + | Chr6:39305366-39305385 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 39305191 | 39306420 | 39305191 | ID=MsG0680032363.01;Name=MsG0680032363.01 |
Chr6 | mRNA | 39305191 | 39306420 | 39305191 | ID=MsG0680032363.01.T01;Parent=MsG0680032363.01;Name=MsG0680032363.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|2|0|381 |
Chr6 | exon | 39305554 | 39306420 | 39305554 | ID=MsG0680032363.01.T01:exon:21391;Parent=MsG0680032363.01.T01 |
Chr6 | exon | 39305191 | 39305469 | 39305191 | ID=MsG0680032363.01.T01:exon:21390;Parent=MsG0680032363.01.T01 |
Chr6 | CDS | 39305554 | 39306420 | 39305554 | ID=MsG0680032363.01.T01:cds;Parent=MsG0680032363.01.T01 |
Chr6 | CDS | 39305191 | 39305469 | 39305191 | ID=MsG0680032363.01.T01:cds;Parent=MsG0680032363.01.T01 |
Gene Sequence |
Protein sequence |