AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027440.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027440.01.T01 MTR_5g058100 78.811 387 72 4 1 378 1 386 0.0 586
MsG0580027440.01.T01 MTR_5g058000 72.105 380 99 5 1 377 1 376 0.0 508
MsG0580027440.01.T01 MTR_1g066830 58.594 384 143 5 6 375 5 386 9.18e-139 400
MsG0580027440.01.T01 MTR_1089s0010 54.907 377 160 5 9 378 8 381 6.04e-124 362
MsG0580027440.01.T01 MTR_5g073420 52.987 385 162 9 1 375 4 379 1.32e-122 359
MsG0580027440.01.T01 MTR_6g040270 53.369 371 165 4 11 374 10 379 1.53e-118 349
MsG0580027440.01.T01 MTR_1g085120 51.671 389 164 9 8 378 91 473 2.61e-109 328
MsG0580027440.01.T01 MTR_1g085120 51.671 389 164 9 8 378 166 548 1.40e-108 329
MsG0580027440.01.T01 MTR_6g022500 50.000 382 167 10 9 374 101 474 9.44e-102 309
MsG0580027440.01.T01 MTR_7g055943 48.579 387 179 9 9 378 40 423 1.50e-101 307
MsG0580027440.01.T01 MTR_6g011460 50.785 382 172 9 9 378 46 423 2.49e-100 304
MsG0580027440.01.T01 MTR_5g061680 53.289 304 120 6 9 310 11 294 5.16e-97 292
MsG0580027440.01.T01 MTR_4g039440 48.346 393 168 14 9 378 34 414 2.16e-93 286
MsG0580027440.01.T01 MTR_6g044572 47.030 404 159 11 9 375 2 387 5.94e-92 281
MsG0580027440.01.T01 MTR_6g044560 46.715 411 164 11 2 375 171 563 1.92e-90 283
MsG0580027440.01.T01 MTR_6g022360 45.550 382 178 10 9 376 43 408 3.40e-87 270
MsG0580027440.01.T01 MTR_7g026500 41.176 391 198 9 9 376 14 395 9.96e-82 255
MsG0580027440.01.T01 MTR_5g045170 43.152 387 184 16 11 374 16 389 8.00e-76 240
MsG0580027440.01.T01 MTR_1g085120 50.340 294 132 6 8 288 178 470 6.00e-75 240
MsG0580027440.01.T01 MTR_1g108820 41.935 403 190 16 1 376 1 386 7.03e-72 229
MsG0580027440.01.T01 MTR_3g095600 44.231 364 123 13 9 367 4 292 9.25e-72 226
MsG0580027440.01.T01 MTR_6g022520 49.216 319 143 10 75 378 1 315 6.28e-69 219
MsG0580027440.01.T01 MTR_5g007410 38.360 378 208 8 11 368 28 400 1.86e-67 220
MsG0580027440.01.T01 MTR_6g045333 38.325 394 207 13 9 375 61 445 8.55e-66 216
MsG0580027440.01.T01 MTR_5g073370 38.579 394 202 14 9 378 5 382 1.31e-61 203
MsG0580027440.01.T01 MTR_1g108800 41.688 391 164 14 1 376 1 342 2.09e-61 201
MsG0580027440.01.T01 MTR_2g036470 38.281 384 218 9 9 375 14 395 6.56e-61 201
MsG0580027440.01.T01 MTR_3g071850 37.209 387 215 12 9 372 24 405 2.46e-59 206
MsG0580027440.01.T01 MTR_5g039490 39.221 385 195 13 6 376 17 376 4.23e-59 196
MsG0580027440.01.T01 MTR_0009s0080 37.802 373 205 11 11 362 20 386 1.88e-58 196
MsG0580027440.01.T01 MTR_5g039450 37.047 386 192 11 6 373 3 355 9.71e-57 189
MsG0580027440.01.T01 MTR_5g076150 50.000 218 81 6 117 307 11 227 7.74e-55 181
MsG0580027440.01.T01 MTR_5g073340 39.583 336 142 11 1 311 1 300 7.87e-55 183
MsG0580027440.01.T01 MTR_5g045510 35.990 389 200 11 9 376 12 372 1.62e-54 184
MsG0580027440.01.T01 MTR_5g031970 34.656 378 194 9 9 373 16 353 1.42e-52 178
MsG0580027440.01.T01 MTR_2g007450 33.971 418 209 12 9 374 16 418 1.29e-51 178
MsG0580027440.01.T01 MTR_5g063950 34.359 390 193 12 9 373 8 359 1.37e-50 173
MsG0580027440.01.T01 MTR_5g039470 38.209 335 180 10 25 339 1 328 2.72e-48 166
MsG0580027440.01.T01 MTR_1g041245 35.533 394 218 17 4 375 6 385 4.78e-48 167
MsG0580027440.01.T01 MTR_3g107100 33.671 395 226 12 8 374 10 396 2.14e-47 166
MsG0580027440.01.T01 MTR_7g056433 34.673 398 210 15 8 375 11 388 4.72e-47 165
MsG0580027440.01.T01 MTR_3g023630 34.211 380 227 9 5 373 4 371 5.17e-47 164
MsG0580027440.01.T01 MTR_3g095630 52.174 184 78 6 202 377 6 187 1.08e-46 158
MsG0580027440.01.T01 MTR_7g088260 35.459 392 219 15 3 375 85 461 2.41e-45 162
MsG0580027440.01.T01 MTR_7g098480 34.949 392 209 15 9 375 18 388 3.03e-45 162
MsG0580027440.01.T01 MTR_5g065100 36.800 375 185 15 14 375 13 348 3.91e-45 161
MsG0580027440.01.T01 MTR_7g032380 34.447 389 203 14 2 375 4 355 4.80e-45 159
MsG0580027440.01.T01 MTR_1g108820 38.462 312 152 12 1 286 1 298 7.40e-45 158
MsG0580027440.01.T01 MTR_3g036250 34.375 384 208 16 9 373 5 363 1.66e-44 157
MsG0580027440.01.T01 MTR_7g098510 34.351 393 212 14 9 375 18 390 1.69e-44 158
MsG0580027440.01.T01 MTR_3g099830 33.167 401 207 15 2 374 5 372 6.48e-44 156
MsG0580027440.01.T01 MTR_3g107160 32.308 390 220 14 9 373 10 380 4.78e-43 154
MsG0580027440.01.T01 MTR_1g053025 31.818 396 228 12 9 373 2 386 9.59e-43 153
MsG0580027440.01.T01 MTR_3g105060 33.071 381 229 12 4 375 9 372 2.97e-42 152
MsG0580027440.01.T01 MTR_5g058350 47.644 191 73 3 9 199 8 171 5.13e-42 145
MsG0580027440.01.T01 MTR_7g056287 34.286 385 221 12 8 375 2 371 1.48e-41 150
MsG0580027440.01.T01 MTR_7g033990 35.509 383 216 13 4 368 6 375 2.06e-41 150
MsG0580027440.01.T01 MTR_7g033915 34.293 382 222 15 2 375 4 364 2.23e-41 149
MsG0580027440.01.T01 MTR_2g007400 31.017 403 228 14 9 374 12 401 3.22e-41 150
MsG0580027440.01.T01 MTR_7g115270 31.463 410 228 13 2 373 5 399 6.30e-41 149
MsG0580027440.01.T01 MTR_3g108560 32.199 382 233 10 8 375 19 388 1.83e-40 147
MsG0580027440.01.T01 MTR_7g098570 32.225 391 231 11 1 371 12 388 3.41e-40 149
MsG0580027440.01.T01 MTR_1377s0010 57.778 135 53 2 222 352 3 137 5.45e-40 139
MsG0580027440.01.T01 MTR_3g040700 32.955 352 194 14 4 335 38 367 1.29e-39 146
MsG0580027440.01.T01 MTR_7g056277 34.301 379 229 12 8 375 258 627 1.66e-39 149
MsG0580027440.01.T01 MTR_7g114710 31.458 391 214 12 4 375 8 363 1.79e-39 144
MsG0580027440.01.T01 MTR_7g007080 33.248 391 221 14 8 374 3 377 2.86e-39 144
MsG0580027440.01.T01 MTR_5g008950 31.877 389 222 15 11 378 1 367 9.81e-39 142
MsG0580027440.01.T01 MTR_3g095640 50.602 166 74 4 1 159 11 175 1.24e-38 136
MsG0580027440.01.T01 MTR_5g083890 33.668 398 213 13 8 365 5 391 1.95e-38 144
MsG0580027440.01.T01 MTR_3g107120 31.172 401 219 13 9 373 9 388 4.00e-38 141
MsG0580027440.01.T01 MTR_5g033200 52.000 150 67 2 223 367 24 173 4.47e-38 135
MsG0580027440.01.T01 MTR_4g098590 33.516 364 200 10 11 342 1 354 1.16e-37 139
MsG0580027440.01.T01 MTR_3g108150 32.832 399 221 16 4 375 8 386 6.14e-37 138
MsG0580027440.01.T01 MTR_7g075820 32.360 411 218 18 5 374 1 392 3.78e-36 136
MsG0580027440.01.T01 MTR_2g008320 31.807 393 232 11 4 374 47 425 6.16e-36 136
MsG0580027440.01.T01 MTR_2g005990 32.598 408 213 15 9 374 6 393 6.17e-36 135
MsG0580027440.01.T01 MTR_2g008310 31.606 386 226 11 9 374 2 369 7.80e-36 135
MsG0580027440.01.T01 MTR_1g107385 30.562 409 234 13 3 374 26 421 8.83e-36 135
MsG0580027440.01.T01 MTR_0543s0010 32.821 390 223 15 4 375 81 449 1.22e-35 135
MsG0580027440.01.T01 MTR_3g467400 31.472 394 213 14 9 375 3 366 7.67e-35 132
MsG0580027440.01.T01 MTR_2g007360 30.488 410 206 16 2 374 5 372 2.71e-34 130
MsG0580027440.01.T01 MTR_7g034115 31.186 388 228 13 3 368 5 375 8.54e-34 129
MsG0580027440.01.T01 MTR_7g032370 32.267 375 209 14 21 375 2 351 2.11e-33 127
MsG0580027440.01.T01 MTR_7g056430 29.427 384 228 13 1 368 1 357 2.44e-33 132
MsG0580027440.01.T01 MTR_7g056420 29.427 384 228 13 1 368 1 357 2.69e-33 132
MsG0580027440.01.T01 MTR_8g085430 31.909 351 161 12 9 344 11 298 6.96e-33 125
MsG0580027440.01.T01 MTR_7g060470 29.487 390 230 12 8 363 2 380 1.32e-32 126
MsG0580027440.01.T01 MTR_5g008920 29.000 400 245 10 1 378 1 383 1.47e-32 126
MsG0580027440.01.T01 MTR_7g007340 31.593 383 207 14 2 368 6 349 9.52e-32 123
MsG0580027440.01.T01 MTR_7g083740 29.381 388 215 13 9 375 17 366 1.83e-31 122
MsG0580027440.01.T01 MTR_0492s0020 32.181 376 216 15 4 361 81 435 2.22e-31 124
MsG0580027440.01.T01 MTR_7g034090 31.266 387 175 15 8 378 3 314 3.45e-31 123
MsG0580027440.01.T01 MTR_2g007500 30.812 357 185 11 1 322 6 335 3.58e-31 121
MsG0580027440.01.T01 MTR_3g082890 32.506 403 220 17 9 375 97 483 1.98e-30 122
MsG0580027440.01.T01 MTR_1g059860 33.438 317 153 11 71 335 1 311 1.36e-28 114
MsG0580027440.01.T01 MTR_7g021990 30.203 394 235 14 9 377 48 426 1.57e-28 115
MsG0580027440.01.T01 MTR_7g021950 30.203 394 235 14 9 377 48 426 4.45e-28 115
MsG0580027440.01.T01 MTR_7g034110 30.526 380 198 13 2 366 4 332 5.42e-28 112
MsG0580027440.01.T01 MTR_5g054920 37.113 194 101 5 181 360 7 193 6.17e-28 108
MsG0580027440.01.T01 MTR_5g012840 31.250 352 167 15 30 362 10 305 1.74e-27 110
MsG0580027440.01.T01 MTR_6g022390 51.163 129 52 2 9 128 5 131 1.77e-27 106
MsG0580027440.01.T01 MTR_0571s0010 63.529 85 30 1 4 88 27 110 2.57e-27 104
MsG0580027440.01.T01 MTR_3g082890 30.909 440 215 19 9 375 17 440 3.98e-27 112
MsG0580027440.01.T01 MTR_6g033095 36.098 205 80 3 141 344 32 186 9.03e-27 105
MsG0580027440.01.T01 MTR_3g108560 31.142 289 179 7 8 286 19 297 1.12e-26 108
MsG0580027440.01.T01 MTR_7g034120 32.669 251 146 8 136 375 69 307 2.35e-25 104
MsG0580027440.01.T01 MTR_7g056020 31.234 381 213 13 8 368 15 366 2.70e-25 107
MsG0580027440.01.T01 MTR_4g032730 26.882 465 229 18 9 375 15 466 8.60e-25 105
MsG0580027440.01.T01 MTR_7g022105 29.067 375 232 13 9 361 49 411 4.02e-24 103
MsG0580027440.01.T01 MTR_7g056447 36.842 190 113 5 1 188 1 185 5.09e-24 100
MsG0580027440.01.T01 MTR_3g087260 31.679 262 150 7 133 375 205 456 5.09e-24 103
MsG0580027440.01.T01 MTR_3g087260 38.725 204 97 8 9 207 12 192 2.20e-20 92.8
MsG0580027440.01.T01 MTR_5g024060 39.080 174 88 5 198 368 42 200 1.80e-23 98.6
MsG0580027440.01.T01 MTR_2g007550 28.684 380 205 14 4 373 9 332 7.77e-23 98.6
MsG0580027440.01.T01 MTR_2g007090 35.398 226 121 9 156 375 87 293 8.16e-23 97.4
MsG0580027440.01.T01 MTR_5g061410 29.730 296 165 9 5 286 1 267 8.78e-23 97.1
MsG0580027440.01.T01 MTR_3g026920 28.673 422 216 13 4 373 14 402 2.35e-22 98.2
MsG0580027440.01.T01 MTR_7g007370 30.556 396 177 18 1 372 12 333 1.64e-21 94.7
MsG0580027440.01.T01 MTR_8g062010 26.484 438 250 15 1 375 1 429 4.61e-21 94.4
MsG0580027440.01.T01 MTR_8g062080 25.114 438 257 14 1 375 15 444 9.43e-21 93.6
MsG0580027440.01.T01 MTR_3g109982 32.042 284 167 11 9 282 13 280 3.96e-20 92.8
MsG0580027440.01.T01 MTR_3g109982 31.200 250 153 9 133 368 224 468 5.46e-18 86.3
MsG0580027440.01.T01 MTR_3g110010 32.042 284 167 11 9 282 13 280 5.71e-20 92.0
MsG0580027440.01.T01 MTR_8g062310 27.578 417 238 17 9 375 25 427 9.85e-20 90.5
MsG0580027440.01.T01 MTR_4g134150 32.308 195 119 5 5 197 10 193 1.13e-19 87.4
MsG0580027440.01.T01 MTR_5g044790 37.908 153 56 4 255 373 290 437 2.11e-19 89.7
MsG0580027440.01.T01 MTR_3g071790 32.828 198 94 7 164 336 19 202 4.71e-19 85.1
MsG0580027440.01.T01 MTR_8g070950 26.316 437 236 15 8 375 14 433 5.47e-19 88.6
MsG0580027440.01.T01 MTR_8g062270 25.111 450 242 17 9 375 16 453 7.97e-19 88.2
MsG0580027440.01.T01 MTR_6g022410 55.000 80 35 1 296 375 28 106 7.49e-18 79.0
MsG0580027440.01.T01 MTR_7g033945 34.066 182 105 6 2 174 4 179 6.40e-17 78.6
MsG0580027440.01.T01 MTR_8g468810 26.906 446 239 18 9 375 25 462 1.42e-16 81.3
MsG0580027440.01.T01 MTR_4g080610 26.700 397 222 15 1 375 7 356 1.91e-16 80.1
MsG0580027440.01.T01 MTR_7g075800 26.456 412 212 16 1 340 1 393 5.30e-16 80.1
MsG0580027440.01.T01 MTR_5g013500 26.816 358 207 13 47 375 33 364 3.37e-15 76.6
MsG0580027440.01.T01 MTR_6g029350 32.243 214 107 9 180 374 2 196 6.19e-15 73.9
MsG0580027440.01.T01 MTR_4g093690 31.527 203 97 7 9 189 18 200 9.49e-15 74.3
MsG0580027440.01.T01 MTR_7g022060 24.011 379 205 12 8 368 9 322 1.01e-14 74.7
MsG0580027440.01.T01 MTR_8g467800 32.990 194 112 6 8 191 19 204 1.99e-14 73.9
MsG0580027440.01.T01 MTR_7g033940 49.383 81 37 2 11 91 96 172 2.31e-14 72.0
MsG0580027440.01.T01 MTR_8g467800 32.990 194 112 6 8 191 19 204 3.04e-14 74.3
MsG0580027440.01.T01 MTR_3g114200 36.111 144 80 5 9 147 19 155 6.97e-14 69.3
MsG0580027440.01.T01 MTR_7g021930 24.011 379 205 12 8 368 9 322 9.38e-14 72.0
MsG0580027440.01.T01 MTR_7g021970 24.011 379 205 12 8 368 9 322 9.38e-14 72.0
MsG0580027440.01.T01 MTR_7g056280 29.767 215 119 9 180 373 367 570 1.08e-13 72.8
MsG0580027440.01.T01 MTR_8g468760 27.442 430 245 21 1 375 1 418 1.20e-13 72.4
MsG0580027440.01.T01 MTR_3g115430 34.821 112 67 3 266 375 17 124 1.97e-13 67.0
MsG0580027440.01.T01 MTR_2g083840 22.976 457 241 17 9 375 21 456 2.14e-13 71.6
MsG0580027440.01.T01 MTR_5g073400 35.659 129 78 4 81 208 3 127 2.84e-13 67.0
MsG0580027440.01.T01 MTR_3g106960 32.979 188 102 9 197 369 13 191 3.61e-13 68.9
MsG0580027440.01.T01 MTR_2g020180 34.815 135 72 5 246 375 91 214 5.94e-13 67.8
MsG0580027440.01.T01 MTR_6g083130 43.158 95 43 2 104 198 232 315 1.46e-12 68.2
MsG0580027440.01.T01 MTR_4g050250 28.767 219 126 8 3 194 15 230 2.30e-12 68.6
MsG0580027440.01.T01 MTR_1g095750 40.385 104 58 2 1 103 38 138 3.12e-12 64.3
MsG0580027440.01.T01 MTR_8g058965 27.854 219 132 7 2 197 6 221 3.84e-12 67.8
MsG0580027440.01.T01 MTR_8g468840 24.658 438 227 18 9 360 14 434 5.04e-12 67.4
MsG0580027440.01.T01 MTR_2g082800 34.127 126 76 3 2 125 20 140 5.28e-12 67.0
MsG0580027440.01.T01 MTR_8g467790 29.694 229 122 10 9 220 148 354 5.36e-12 67.4
MsG0580027440.01.T01 MTR_1g492880 44.186 86 46 2 8 93 5 88 1.59e-11 60.8
MsG0580027440.01.T01 MTR_8g469020 29.524 210 122 6 9 194 7 214 1.83e-11 65.9
MsG0580027440.01.T01 MTR_1g492880 44.186 86 46 2 8 93 5 88 2.52e-11 60.5
MsG0580027440.01.T01 MTR_8g468810 32.338 201 119 8 9 196 25 221 4.70e-11 63.9
MsG0580027440.01.T01 MTR_8g058970 31.163 215 116 10 9 194 19 230 4.75e-11 64.3
MsG0580027440.01.T01 MTR_6g061720 54.688 64 28 1 14 76 13 76 5.70e-11 58.5
MsG0580027440.01.T01 MTR_4g056020 31.795 195 110 6 9 190 9 193 6.28e-11 63.9
MsG0580027440.01.T01 MTR_8g468810 32.338 201 119 8 9 196 25 221 6.31e-11 63.5
MsG0580027440.01.T01 MTR_8g468810 32.338 201 119 8 9 196 25 221 7.44e-11 63.5
MsG0580027440.01.T01 MTR_8g468810 32.338 201 119 8 9 196 25 221 9.66e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027440.01.T01 AT4G10400 28.029 421 237 16 9 376 2 409 5.22e-26 108
MsG0580027440.01.T01 AT4G10400 28.029 421 237 16 9 376 2 409 5.22e-26 108
MsG0580027440.01.T01 AT4G10400 28.029 421 237 16 9 376 2 409 5.22e-26 108
MsG0580027440.01.T01 AT5G41840 36.275 204 101 7 9 190 14 210 2.03e-21 96.3
MsG0580027440.01.T01 AT4G00320 29.189 370 154 15 9 282 13 370 2.48e-21 95.9
MsG0580027440.01.T01 AT3G50710 25.116 430 250 11 9 373 2 424 3.89e-21 94.7
MsG0580027440.01.T01 AT5G41830 29.189 370 160 15 6 282 10 370 2.14e-20 93.2
MsG0580027440.01.T01 AT3G58940 27.002 437 214 19 9 359 2 419 8.25e-20 91.7
MsG0580027440.01.T01 AT3G58940 27.002 437 214 19 9 359 2 419 8.25e-20 91.7
MsG0580027440.01.T01 AT5G56420 25.057 435 247 16 5 375 2 421 1.60e-19 90.1
MsG0580027440.01.T01 AT5G56420 25.057 435 247 16 5 375 2 421 1.60e-19 90.1
MsG0580027440.01.T01 AT5G56420 25.057 435 247 16 5 375 2 421 1.60e-19 90.1
MsG0580027440.01.T01 AT4G00160 25.688 436 253 13 5 375 12 441 1.09e-18 87.8
MsG0580027440.01.T01 AT4G09920 33.000 200 118 6 9 202 2 191 2.46e-18 84.7
MsG0580027440.01.T01 AT4G09920 33.000 200 118 6 9 202 2 191 2.46e-18 84.7
MsG0580027440.01.T01 AT4G09920 33.000 200 118 6 9 202 2 191 2.46e-18 84.7
MsG0580027440.01.T01 AT5G56690 25.123 406 220 15 11 342 4 399 2.52e-18 86.3
MsG0580027440.01.T01 AT4G09920 33.000 200 118 6 9 202 2 191 2.68e-18 85.1
MsG0580027440.01.T01 AT4G09920 33.000 200 118 6 9 202 2 191 2.68e-18 85.1
MsG0580027440.01.T01 AT1G78750 24.215 446 249 14 9 373 18 455 4.90e-18 85.9
MsG0580027440.01.T01 AT1G78750 24.215 446 249 14 9 373 18 455 4.90e-18 85.9
MsG0580027440.01.T01 AT5G56370 26.852 432 240 15 9 376 2 421 1.12e-17 84.3
MsG0580027440.01.T01 AT5G56370 26.852 432 240 15 9 376 2 421 1.12e-17 84.3
MsG0580027440.01.T01 AT4G14096 34.737 190 109 7 9 190 8 190 1.48e-17 84.3
MsG0580027440.01.T01 AT4G14096 34.737 190 109 7 9 190 8 190 1.48e-17 84.3
MsG0580027440.01.T01 AT3G52680 26.742 445 235 18 5 375 17 444 6.31e-17 82.4
MsG0580027440.01.T01 AT4G14103 34.021 194 107 7 9 190 8 192 6.98e-17 81.6
MsG0580027440.01.T01 AT4G14103 34.021 194 107 7 9 190 8 192 6.98e-17 81.6
MsG0580027440.01.T01 AT3G42770 26.744 430 228 16 14 370 4 419 7.64e-17 82.4
MsG0580027440.01.T01 AT4G14103 34.021 194 107 7 9 190 8 192 8.60e-17 82.0
MsG0580027440.01.T01 AT5G53635 33.333 186 114 5 10 191 1 180 1.34e-16 81.3
MsG0580027440.01.T01 AT3G59170 33.023 215 107 7 9 190 7 217 2.54e-16 80.5
MsG0580027440.01.T01 AT3G59190 34.673 199 104 8 9 190 12 201 2.95e-16 80.1
MsG0580027440.01.T01 AT3G59200 34.896 192 110 7 9 190 7 193 2.97e-16 79.7
MsG0580027440.01.T01 AT3G59190 35.176 199 103 8 9 190 12 201 3.60e-16 80.5
MsG0580027440.01.T01 AT3G59200 34.896 192 110 7 9 190 7 193 5.29e-16 79.7
MsG0580027440.01.T01 AT3G58860 27.874 348 168 13 9 284 7 343 5.56e-16 79.7
MsG0580027440.01.T01 AT3G49150 34.184 196 105 8 9 190 16 201 1.28e-15 78.6
MsG0580027440.01.T01 AT5G53840 22.811 434 258 12 6 373 15 437 1.48e-15 78.2
MsG0580027440.01.T01 AT5G56400 25.740 439 237 18 9 375 33 454 1.50e-15 78.2
MsG0580027440.01.T01 AT1G48400 34.359 195 112 7 6 190 7 195 1.73e-15 78.2
MsG0580027440.01.T01 AT1G48400 34.359 195 112 7 6 190 7 195 1.86e-15 78.2
MsG0580027440.01.T01 AT5G22670 23.245 413 231 10 2 338 4 406 3.40e-15 77.0
MsG0580027440.01.T01 AT1G58310 31.944 216 113 8 9 197 8 216 3.52e-15 77.4
MsG0580027440.01.T01 AT3G58880 33.488 215 127 7 9 212 3 212 3.62e-15 77.0
MsG0580027440.01.T01 AT4G27050 23.210 461 248 16 9 375 4 452 3.77e-15 77.0
MsG0580027440.01.T01 AT4G27050 23.210 461 248 16 9 375 4 452 3.77e-15 77.0
MsG0580027440.01.T01 AT4G27050 23.210 461 248 16 9 375 4 452 3.77e-15 77.0
MsG0580027440.01.T01 AT4G27050 23.210 461 248 16 9 375 4 452 3.77e-15 77.0
MsG0580027440.01.T01 AT4G27050 23.210 461 248 16 9 375 4 452 3.77e-15 77.0
MsG0580027440.01.T01 AT5G44940 24.500 400 237 14 9 373 5 374 4.63e-15 76.3
MsG0580027440.01.T01 AT5G53640 27.317 205 132 5 3 198 16 212 1.52e-14 72.8
MsG0580027440.01.T01 AT3G59240 29.949 197 119 7 9 193 8 197 1.96e-14 75.1
MsG0580027440.01.T01 AT5G22700 35.263 190 102 8 9 190 43 219 2.33e-14 74.7
MsG0580027440.01.T01 AT5G22700 35.263 190 102 8 9 190 43 219 2.48e-14 74.7
MsG0580027440.01.T01 AT5G22700 35.263 190 102 8 9 190 6 182 2.81e-14 74.3
MsG0580027440.01.T01 AT5G22700 35.263 190 102 8 9 190 6 182 2.81e-14 74.3
MsG0580027440.01.T01 AT5G22700 35.263 190 102 8 9 190 6 182 2.81e-14 74.3
MsG0580027440.01.T01 AT5G22700 35.263 190 102 8 9 190 6 182 2.81e-14 74.3
MsG0580027440.01.T01 AT5G38570 26.829 410 223 14 9 376 2 376 2.96e-14 73.9
MsG0580027440.01.T01 AT1G69630 24.550 444 243 15 9 373 18 448 3.04e-14 74.3
MsG0580027440.01.T01 AT1G21990 32.973 185 117 4 9 190 9 189 3.19e-14 74.3
MsG0580027440.01.T01 AT1G16930 32.804 189 110 7 9 190 15 193 4.12e-14 73.9
MsG0580027440.01.T01 AT1G16930 32.804 189 110 7 9 190 15 193 4.12e-14 73.9
MsG0580027440.01.T01 AT1G16930 32.804 189 110 7 9 190 15 193 4.12e-14 73.9
MsG0580027440.01.T01 AT3G60040 26.216 370 178 14 1 285 222 581 7.25e-14 73.6
MsG0580027440.01.T01 AT3G60040 26.216 370 178 14 1 285 5 364 7.32e-14 73.6
MsG0580027440.01.T01 AT3G60040 26.216 370 178 14 1 285 224 583 7.74e-14 73.6
MsG0580027440.01.T01 AT3G60040 26.216 370 178 14 1 285 225 584 8.03e-14 73.6
MsG0580027440.01.T01 AT3G60040 26.216 370 178 14 1 285 224 583 8.10e-14 73.6
MsG0580027440.01.T01 AT3G58900 33.772 228 129 9 9 223 2 220 1.13e-13 71.6
MsG0580027440.01.T01 AT3G58900 33.772 228 129 9 9 223 2 220 1.13e-13 71.6
MsG0580027440.01.T01 AT5G56380 32.990 194 111 7 9 190 2 188 1.20e-13 72.4
MsG0580027440.01.T01 AT5G56380 32.990 194 111 7 9 190 2 188 1.20e-13 72.4
MsG0580027440.01.T01 AT5G22660 32.461 191 112 5 6 190 10 189 1.22e-13 71.6
MsG0580027440.01.T01 AT3G58900 33.772 228 129 9 9 223 2 220 1.38e-13 71.2
MsG0580027440.01.T01 AT4G15060 32.000 200 125 6 9 202 26 220 1.79e-13 71.6
MsG0580027440.01.T01 AT4G22280 33.155 187 112 5 9 190 2 180 2.49e-13 70.9
MsG0580027440.01.T01 AT3G58900 33.906 233 122 10 9 223 2 220 2.60e-13 71.6
MsG0580027440.01.T01 AT4G15060 32.000 200 125 6 9 202 172 366 3.47e-13 71.2
MsG0580027440.01.T01 AT5G41630 31.776 214 110 10 1 190 4 205 3.77e-13 70.9
MsG0580027440.01.T01 AT5G22660 32.461 191 112 5 6 190 10 189 4.63e-13 70.5
MsG0580027440.01.T01 AT4G22280 33.155 187 112 5 9 190 2 180 5.94e-13 70.1
MsG0580027440.01.T01 AT5G38392 32.836 201 108 8 9 190 2 194 6.30e-13 67.8
MsG0580027440.01.T01 AT1G64540 32.447 188 107 9 7 190 3 174 7.91e-13 70.1
MsG0580027440.01.T01 AT1G64540 32.447 188 107 9 7 190 3 174 7.91e-13 70.1
MsG0580027440.01.T01 AT3G59210 33.010 206 117 8 9 201 7 204 8.51e-13 70.1
MsG0580027440.01.T01 AT3G59210 33.010 206 117 8 9 201 7 204 8.51e-13 70.1
MsG0580027440.01.T01 AT3G59210 33.010 206 117 8 9 201 7 204 8.51e-13 70.1
MsG0580027440.01.T01 AT3G59210 33.010 206 117 8 9 201 7 204 8.51e-13 70.1
MsG0580027440.01.T01 AT3G59210 33.010 206 117 8 9 201 7 204 8.51e-13 70.1
MsG0580027440.01.T01 AT4G13960 33.493 209 114 9 9 203 2 199 9.76e-13 69.7
MsG0580027440.01.T01 AT4G13960 33.493 209 114 9 9 203 2 199 9.76e-13 69.7
MsG0580027440.01.T01 AT4G26350 26.733 303 187 9 9 293 2 287 1.01e-12 69.7
MsG0580027440.01.T01 AT5G56410 31.628 215 106 8 16 203 10 210 1.48e-12 69.3
MsG0580027440.01.T01 AT2G42720 35.751 193 109 8 9 190 2 190 2.27e-12 68.6
MsG0580027440.01.T01 AT5G56440 26.502 283 155 12 116 376 179 430 3.11e-12 68.2
MsG0580027440.01.T01 AT5G56440 31.553 206 123 7 9 209 2 194 1.13e-11 66.2
MsG0580027440.01.T01 AT5G22720 29.851 201 124 6 3 196 17 207 5.30e-12 67.4
MsG0580027440.01.T01 AT5G22730 29.358 218 140 6 5 218 24 231 5.52e-12 67.4
MsG0580027440.01.T01 AT5G22730 29.358 218 140 6 5 218 24 231 5.52e-12 67.4
MsG0580027440.01.T01 AT5G22730 29.358 218 140 6 5 218 24 231 6.36e-12 67.0
MsG0580027440.01.T01 AT5G38386 26.277 411 218 19 9 361 2 385 6.63e-12 67.0
MsG0580027440.01.T01 AT5G38386 26.277 411 218 19 9 361 2 385 6.63e-12 67.0
MsG0580027440.01.T01 AT3G58980 33.175 211 117 9 9 206 2 201 7.09e-12 67.4
MsG0580027440.01.T01 AT5G38390 30.964 197 120 6 9 201 2 186 9.77e-12 66.6
MsG0580027440.01.T01 AT5G56810 31.818 198 117 7 1 190 8 195 1.37e-11 65.5
MsG0580027440.01.T01 AT3G44810 34.518 197 97 7 14 190 12 196 1.46e-11 65.9
MsG0580027440.01.T01 AT3G58820 27.666 347 190 14 9 308 2 334 1.60e-11 65.9
MsG0580027440.01.T01 AT5G60610 29.108 213 112 9 9 207 2 189 1.80e-11 65.5
MsG0580027440.01.T01 AT5G60610 29.108 213 112 9 9 207 2 189 1.80e-11 65.5
MsG0580027440.01.T01 AT5G44490 26.190 210 138 5 4 206 12 211 1.84e-11 65.9
MsG0580027440.01.T01 AT5G56810 31.818 198 117 7 1 190 8 195 2.09e-11 65.5
MsG0580027440.01.T01 AT4G00315 33.161 193 110 9 9 190 2 186 2.16e-11 65.5
MsG0580027440.01.T01 AT5G44490 26.190 210 138 5 4 206 12 211 2.21e-11 65.5
MsG0580027440.01.T01 AT3G44080 25.000 400 231 15 14 373 12 382 2.28e-11 65.1
MsG0580027440.01.T01 AT5G56370 31.624 234 141 7 9 236 2 222 2.30e-11 64.7
MsG0580027440.01.T01 AT5G62970 29.524 210 116 6 9 190 2 207 2.36e-11 65.5
MsG0580027440.01.T01 AT1G52650 30.732 205 122 6 9 201 2 198 2.44e-11 65.5
MsG0580027440.01.T01 AT3G59150 31.771 192 122 5 9 192 13 203 3.06e-11 65.1
MsG0580027440.01.T01 AT5G35995 34.184 196 98 10 9 190 5 183 4.64e-11 64.3
MsG0580027440.01.T01 AT5G35995 34.184 196 98 10 9 190 5 183 4.64e-11 64.3
MsG0580027440.01.T01 AT4G26340 31.343 201 119 7 9 203 2 189 4.66e-11 64.3
MsG0580027440.01.T01 AT1G55030 24.155 414 225 14 1 345 1 394 5.53e-11 64.3
MsG0580027440.01.T01 AT3G03030 28.934 197 121 5 9 191 2 193 6.01e-11 63.5
MsG0580027440.01.T01 AT2G04230 24.775 444 248 12 8 375 12 445 6.38e-11 63.9
MsG0580027440.01.T01 AT1G55030 24.155 414 225 14 1 345 11 404 7.03e-11 63.9
MsG0580027440.01.T01 AT3G03030 28.934 197 121 5 9 191 2 193 7.54e-11 63.9
MsG0580027440.01.T01 AT5G38396 30.846 201 112 8 9 190 2 194 7.78e-11 63.9
MsG0580027440.01.T01 AT5G56820 26.754 228 118 5 5 221 11 200 9.10e-11 63.5

Find 59 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATGAATATTCCTTTAAA+AGG 0.215458 5:+60919888 MsG0580027440.01.T01:CDS
GCCTCAGATCATGTACTATT+TGG 0.217426 5:+60920181 MsG0580027440.01.T01:CDS
ATCCTTGTTCTTGTCCAAAT+TGG 0.227398 5:+60919590 MsG0580027440.01.T01:CDS
ACAGAGTGGGGCCCAACTTT+TGG 0.290459 5:-60919073 None:intergenic
AATACAGGCTCTAACCAATT+TGG 0.298776 5:-60919604 None:intergenic
GCAAATGAAAGTTTGCATTC+AGG 0.312426 5:-60920363 None:intergenic
TGGTGTATTGGCTTCTTTCA+AGG 0.328599 5:+60919948 MsG0580027440.01.T01:CDS
CATATTCAGCTATGGTGTAT+TGG 0.343808 5:+60919936 MsG0580027440.01.T01:CDS
ACACATTCAGGAACTGAAAT+CGG 0.349592 5:-60920150 None:intergenic
CTTGAGTGCTTAAAAGTTGA+AGG 0.361707 5:+60919390 MsG0580027440.01.T01:CDS
AATTAAATTAAACTGAATAT+CGG 0.368274 5:-60919844 None:intergenic
GGTTGTGGTGAAAGCAAGTT+TGG 0.374114 5:-60919043 None:intergenic
GTATTGGCTTCTTTCAAGGC+TGG 0.378785 5:+60919952 MsG0580027440.01.T01:CDS
CATAAAATCGAGAGAGTTTG+AGG 0.393226 5:-60919227 None:intergenic
AACAAATTTCTCTTAGATGT+AGG 0.398184 5:-60919449 None:intergenic
ATATAAAGAATTTGAAGCTT+GGG 0.405618 5:-60920005 None:intergenic
CAACCCTTCTCTCCAAAAGT+TGG 0.406488 5:+60919061 MsG0580027440.01.T01:CDS
GTACGCAAATCTTGCAGAAT+AGG 0.412608 5:-60919513 None:intergenic
ACAAATTTCTCTTAGATGTA+GGG 0.417789 5:-60919448 None:intergenic
TCAAATTCTTTATATTAGAA+AGG 0.423662 5:+60920013 MsG0580027440.01.T01:CDS
AGGCGAGACGAAACACATTC+AGG 0.432852 5:-60920162 None:intergenic
TATTGGCTTCTTTCAAGGCT+GGG 0.449138 5:+60919953 MsG0580027440.01.T01:CDS
TGCATTCAGGAGACATCCTT+GGG 0.450673 5:-60920350 None:intergenic
TTGCATTCAGGAGACATCCT+TGG 0.455481 5:-60920351 None:intergenic
AATATAAAGAATTTGAAGCT+TGG 0.455826 5:-60920006 None:intergenic
GATAACTCTTGTATAATTTG+AGG 0.456365 5:-60920321 None:intergenic
AACCCTTCTCTCCAAAAGTT+GGG 0.468928 5:+60919062 MsG0580027440.01.T01:CDS
GGCTTCTTTCAAGGCTGGGA+TGG 0.480979 5:+60919957 MsG0580027440.01.T01:CDS
TTACAGGTCATGGCAATCAA+TGG 0.484248 5:+60920267 MsG0580027440.01.T01:CDS
CTCACTCACAGCTCTTCGCT+TGG 0.490971 5:+60919098 MsG0580027440.01.T01:CDS
TCTTCGCTTGGACGATGAAA+CGG 0.496961 5:+60919110 MsG0580027440.01.T01:CDS
ATGTGACAAAGTAACTCATC+AGG 0.500368 5:-60919003 None:intergenic
TTTCCATTCAATCGATAAGC+AGG 0.502163 5:-60920124 None:intergenic
GCTCCTGCTTATCGATTGAA+TGG 0.502256 5:+60920121 MsG0580027440.01.T01:CDS
CACATTCAGGAACTGAAATC+GGG 0.511727 5:-60920149 None:intergenic
TTCAGGAGACATCCTTGGGC+AGG 0.519767 5:-60920346 None:intergenic
ACTTAATTCATATTCAGCTA+TGG 0.521913 5:+60919928 MsG0580027440.01.T01:CDS
ATCGAAGCTTCTTCTATGCA+TGG 0.531982 5:+60919259 MsG0580027440.01.T01:CDS
ATGGGCTGGTTGGTGGCATG+AGG 0.537935 5:-60919192 None:intergenic
ACTCAAGTTTGACAACAACT+AGG 0.540926 5:-60919374 None:intergenic
TAAGTTGCTGATCATATCAT+CGG 0.544198 5:-60918980 None:intergenic
CTCAAGTTTGACAACAACTA+GGG 0.562157 5:-60919373 None:intergenic
GTGGTGAAAGCAAGTTTGGT+TGG 0.567658 5:-60919039 None:intergenic
CGCAAAACAACGCCGCGTCG+AGG 0.576072 5:+60919290 MsG0580027440.01.T01:CDS
AGGAGACATCCTTGGGCAGG+AGG 0.582142 5:-60920343 None:intergenic
AAGTTGCTGATCATATCATC+GGG 0.583751 5:-60918979 None:intergenic
AACCAATTTGGACAAGAACA+AGG 0.589070 5:-60919592 None:intergenic
GACAACAACTAGGGTTCTAG+AGG 0.595118 5:-60919364 None:intergenic
TCTTCAATGTTACGTTATCG+AGG 0.598355 5:-60919326 None:intergenic
AACTGAATATCGGTTGAACA+AGG 0.600746 5:-60919834 None:intergenic
TCCAAATAGTACATGATCTG+AGG 0.605449 5:-60920182 None:intergenic
AAGAGTTATCCTCCTGCCCA+AGG 0.607933 5:+60920334 MsG0580027440.01.T01:CDS
TGTACTATTTGGAATTGTGA+TGG 0.608514 5:+60920192 MsG0580027440.01.T01:CDS
CTGTGAGTGAGTTACAGAGT+GGG 0.609159 5:-60919086 None:intergenic
TATGAGTAGAGAGTTAACAT+TGG 0.613866 5:-60919868 None:intergenic
TCAATGTTACGTTATCGAGG+AGG 0.646509 5:-60919323 None:intergenic
GCTGTGAGTGAGTTACAGAG+TGG 0.653952 5:-60919087 None:intergenic
TGTGAGTGAGTTACAGAGTG+GGG 0.670380 5:-60919085 None:intergenic
GGAGATGAAATTCCTCGACG+CGG 0.756739 5:-60919302 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATTAAACTGAATAT+CGG - Chr5:60919847-60919866 None:intergenic 10.0%
!! ATAATGAATATTCCTTTAAA+AGG + Chr5:60919888-60919907 MsG0580027440.01.T01:CDS 15.0%
!! TCAAATTCTTTATATTAGAA+AGG + Chr5:60920013-60920032 MsG0580027440.01.T01:CDS 15.0%
!!! AATATAAAGAATTTGAAGCT+TGG - Chr5:60920009-60920028 None:intergenic 20.0%
!!! ATATAAAGAATTTGAAGCTT+GGG - Chr5:60920008-60920027 None:intergenic 20.0%
! AACAAATTTCTCTTAGATGT+AGG - Chr5:60919452-60919471 None:intergenic 25.0%
! ACAAATTTCTCTTAGATGTA+GGG - Chr5:60919451-60919470 None:intergenic 25.0%
! ACTTAATTCATATTCAGCTA+TGG + Chr5:60919928-60919947 MsG0580027440.01.T01:CDS 25.0%
! GATAACTCTTGTATAATTTG+AGG - Chr5:60920324-60920343 None:intergenic 25.0%
!! AATTTTACTTCTGATCTCTT+TGG + Chr5:60920091-60920110 MsG0580027440.01.T01:intron 25.0%
!!! GGTATTTTTCAATCTTCAAA+TGG + Chr5:60920288-60920307 MsG0580027440.01.T01:CDS 25.0%
!!! TGAATTAAGTTTTGAAACAC+AGG - Chr5:60919918-60919937 None:intergenic 25.0%
TAAGTTGCTGATCATATCAT+CGG - Chr5:60918983-60919002 None:intergenic 30.0%
TATGAGTAGAGAGTTAACAT+TGG - Chr5:60919871-60919890 None:intergenic 30.0%
! CATATATTTTGCAGAATGCA+AGG + Chr5:60920241-60920260 MsG0580027440.01.T01:CDS 30.0%
! GTACTTCTTTTGTGACATAT+AGG + Chr5:60919532-60919551 MsG0580027440.01.T01:CDS 30.0%
! TGTACTATTTGGAATTGTGA+TGG + Chr5:60920192-60920211 MsG0580027440.01.T01:CDS 30.0%
!! CACAGTTGGCAAATTTTAAT+TGG - Chr5:60919769-60919788 None:intergenic 30.0%
!! TTGAGGTAAAACGTTTTGAT+GGG - Chr5:60919213-60919232 None:intergenic 30.0%
!! TTTGAGGTAAAACGTTTTGA+TGG - Chr5:60919214-60919233 None:intergenic 30.0%
!!! AGAATTTTTCAAGACACAGT+TGG - Chr5:60919783-60919802 None:intergenic 30.0%
AACCAATTTGGACAAGAACA+AGG - Chr5:60919595-60919614 None:intergenic 35.0%
AAGTTGCTGATCATATCATC+GGG - Chr5:60918982-60919001 None:intergenic 35.0%
ACACATTCAGGAACTGAAAT+CGG - Chr5:60920153-60920172 None:intergenic 35.0%
ACTCAAGTTTGACAACAACT+AGG - Chr5:60919377-60919396 None:intergenic 35.0%
ATCCTTGTTCTTGTCCAAAT+TGG + Chr5:60919590-60919609 MsG0580027440.01.T01:CDS 35.0%
ATGTGACAAAGTAACTCATC+AGG - Chr5:60919006-60919025 None:intergenic 35.0%
ATTGCTCGTTGAACAAATAC+AGG - Chr5:60919622-60919641 None:intergenic 35.0%
CATAAAATCGAGAGAGTTTG+AGG - Chr5:60919230-60919249 None:intergenic 35.0%
CATATTCAGCTATGGTGTAT+TGG + Chr5:60919936-60919955 MsG0580027440.01.T01:CDS 35.0%
CTCAAGTTTGACAACAACTA+GGG - Chr5:60919376-60919395 None:intergenic 35.0%
CTTGAGTGCTTAAAAGTTGA+AGG + Chr5:60919390-60919409 MsG0580027440.01.T01:CDS 35.0%
GCAAATGAAAGTTTGCATTC+AGG - Chr5:60920366-60920385 None:intergenic 35.0%
TCCAAATAGTACATGATCTG+AGG - Chr5:60920185-60920204 None:intergenic 35.0%
TCTTCAATGTTACGTTATCG+AGG - Chr5:60919329-60919348 None:intergenic 35.0%
TTTCCATTCAATCGATAAGC+AGG - Chr5:60920127-60920146 None:intergenic 35.0%
! AACACAGGAATGCCTTTTAA+AGG - Chr5:60919903-60919922 None:intergenic 35.0%
! AACTGAATATCGGTTGAACA+AGG - Chr5:60919837-60919856 None:intergenic 35.0%
! AATACAGGCTCTAACCAATT+TGG - Chr5:60919607-60919626 None:intergenic 35.0%
!!! AGATGTAGGGTTTTGAGATT+TGG - Chr5:60919438-60919457 None:intergenic 35.0%
AACCCTTCTCTCCAAAAGTT+GGG + Chr5:60919062-60919081 MsG0580027440.01.T01:CDS 40.0%
ATCGAAGCTTCTTCTATGCA+TGG + Chr5:60919259-60919278 MsG0580027440.01.T01:CDS 40.0%
CACATTCAGGAACTGAAATC+GGG - Chr5:60920152-60920171 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG + Chr5:60919707-60919726 MsG0580027440.01.T01:intron 40.0%
GCACTATTTGCCACAATTCA+AGG + Chr5:60919704-60919723 MsG0580027440.01.T01:intron 40.0%
GCCTCAGATCATGTACTATT+TGG + Chr5:60920181-60920200 MsG0580027440.01.T01:CDS 40.0%
GGCAAATAGTGCATTGTGAT+TGG - Chr5:60919696-60919715 None:intergenic 40.0%
GTACGCAAATCTTGCAGAAT+AGG - Chr5:60919516-60919535 None:intergenic 40.0%
TCAATGTTACGTTATCGAGG+AGG - Chr5:60919326-60919345 None:intergenic 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + Chr5:60919730-60919749 MsG0580027440.01.T01:intron 40.0%
TTACAGGTCATGGCAATCAA+TGG + Chr5:60920267-60920286 MsG0580027440.01.T01:CDS 40.0%
!! TATTGGCTTCTTTCAAGGCT+GGG + Chr5:60919953-60919972 MsG0580027440.01.T01:CDS 40.0%
!! TGGTGTATTGGCTTCTTTCA+AGG + Chr5:60919948-60919967 MsG0580027440.01.T01:CDS 40.0%
ACTTCTGATCTCTTTGGCAG+TGG + Chr5:60920097-60920116 MsG0580027440.01.T01:intron 45.0%
CAACCCTTCTCTCCAAAAGT+TGG + Chr5:60919061-60919080 MsG0580027440.01.T01:CDS 45.0%
CTGTGAGTGAGTTACAGAGT+GGG - Chr5:60919089-60919108 None:intergenic 45.0%
GGTTGTGGTGAAAGCAAGTT+TGG - Chr5:60919046-60919065 None:intergenic 45.0%
GTGGTGAAAGCAAGTTTGGT+TGG - Chr5:60919042-60919061 None:intergenic 45.0%
TCTTCGCTTGGACGATGAAA+CGG + Chr5:60919110-60919129 MsG0580027440.01.T01:CDS 45.0%
TGCATTCAGGAGACATCCTT+GGG - Chr5:60920353-60920372 None:intergenic 45.0%
TGTGAGTGAGTTACAGAGTG+GGG - Chr5:60919088-60919107 None:intergenic 45.0%
TTGCATTCAGGAGACATCCT+TGG - Chr5:60920354-60920373 None:intergenic 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + Chr5:60919724-60919743 MsG0580027440.01.T01:intron 45.0%
! GACAACAACTAGGGTTCTAG+AGG - Chr5:60919367-60919386 None:intergenic 45.0%
! GCAGAATGCAAGGCTTTTAC+AGG + Chr5:60920251-60920270 MsG0580027440.01.T01:CDS 45.0%
! GCTCCTGCTTATCGATTGAA+TGG + Chr5:60920121-60920140 MsG0580027440.01.T01:CDS 45.0%
! TGCAAGGCTTTTACAGGTCA+TGG + Chr5:60920257-60920276 MsG0580027440.01.T01:CDS 45.0%
!! ACTTTTGGAGAGAAGGGTTG+TGG - Chr5:60919061-60919080 None:intergenic 45.0%
!! GGTAAAACGTTTTGATGGGC+TGG - Chr5:60919209-60919228 None:intergenic 45.0%
!! GTATTGGCTTCTTTCAAGGC+TGG + Chr5:60919952-60919971 MsG0580027440.01.T01:CDS 45.0%
!!! AAACGTTTTGATGGGCTGGT+TGG - Chr5:60919205-60919224 None:intergenic 45.0%
AAGAGTTATCCTCCTGCCCA+AGG + Chr5:60920334-60920353 MsG0580027440.01.T01:CDS 50.0%
AGCCACACCTCCTTGAATTG+TGG - Chr5:60919717-60919736 None:intergenic 50.0%
AGGCGAGACGAAACACATTC+AGG - Chr5:60920165-60920184 None:intergenic 50.0%
GCTGTGAGTGAGTTACAGAG+TGG - Chr5:60919090-60919109 None:intergenic 50.0%
GGAGATGAAATTCCTCGACG+CGG - Chr5:60919305-60919324 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG + Chr5:60919712-60919731 MsG0580027440.01.T01:intron 50.0%
!! GGCCCAACTTTTGGAGAGAA+GGG - Chr5:60919067-60919086 None:intergenic 50.0%
CTCACTCACAGCTCTTCGCT+TGG + Chr5:60919098-60919117 MsG0580027440.01.T01:CDS 55.0%
GGCTTCTTTCAAGGCTGGGA+TGG + Chr5:60919957-60919976 MsG0580027440.01.T01:CDS 55.0%
TTCAGGAGACATCCTTGGGC+AGG - Chr5:60920349-60920368 None:intergenic 55.0%
! ACAGAGTGGGGCCCAACTTT+TGG - Chr5:60919076-60919095 None:intergenic 55.0%
!! GGGCCCAACTTTTGGAGAGA+AGG - Chr5:60919068-60919087 None:intergenic 55.0%
!!! CGTTTTGATGGGCTGGTTGG+TGG - Chr5:60919202-60919221 None:intergenic 55.0%
AGGAGACATCCTTGGGCAGG+AGG - Chr5:60920346-60920365 None:intergenic 60.0%
!! ATGGGCTGGTTGGTGGCATG+AGG - Chr5:60919195-60919214 None:intergenic 60.0%
!! CTCGACGCGGCGTTGTTTTG+CGG - Chr5:60919292-60919311 None:intergenic 60.0%
CGCAAAACAACGCCGCGTCG+AGG + Chr5:60919290-60919309 MsG0580027440.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 60918961 60920395 60918961 ID=MsG0580027440.01;Name=MsG0580027440.01
Chr5 mRNA 60918961 60920395 60918961 ID=MsG0580027440.01.T01;Parent=MsG0580027440.01;Name=MsG0580027440.01.T01;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0.5|0.66|3|0|378
Chr5 exon 60918961 60919611 60918961 ID=MsG0580027440.01.T01:exon:13460;Parent=MsG0580027440.01.T01
Chr5 exon 60919828 60920034 60919828 ID=MsG0580027440.01.T01:exon:13461;Parent=MsG0580027440.01.T01
Chr5 exon 60920117 60920395 60920117 ID=MsG0580027440.01.T01:exon:13462;Parent=MsG0580027440.01.T01
Chr5 CDS 60918961 60919611 60918961 ID=MsG0580027440.01.T01:cds;Parent=MsG0580027440.01.T01
Chr5 CDS 60919828 60920034 60919828 ID=MsG0580027440.01.T01:cds;Parent=MsG0580027440.01.T01
Chr5 CDS 60920117 60920395 60920117 ID=MsG0580027440.01.T01:cds;Parent=MsG0580027440.01.T01
Gene Sequence

>MsG0580027440.01.T01

ATGGAGAACTCAGTAGCACCCGATGATATGATCAGCAACTTACCTGATGAGTTACTTTGTCACATTCTCTCTTTTCTTCCAACCAAACTTGCTTTCACCACAACCCTTCTCTCCAAAAGTTGGGCCCCACTCTGTAACTCACTCACAGCTCTTCGCTTGGACGATGAAACGGTGAAAGACGCTGACAGCTTCAATCGCTTTCGTTGTTTTGTAGATAAACTTATGCTCACTCCTCATGCCACCAACCAGCCCATCAAAACGTTTTACCTCAAACTCTCTCGATTTTATGAAGTTGAACATCGAAGCTTCTTCTATGCATGGTTAGAAGCCGCAAAACAACGCCGCGTCGAGGAATTTCATCTCCTCCTCGATAACGTAACATTGAAGAATCTCACAATTTTCACCTCTAGAACCCTAGTTGTTGTCAAACTTGAGTGCTTAAAAGTTGAAGGTGAAAATTTGTGTGTTAATCTACCAAATCTCAAAACCCTACATCTAAGAGAAATTTGTTTTGAAACTCGAAATAATTTCATGAAACTTCTTAAAGCTTGTCCTATTCTGCAAGATTTGCGTACTTCTTTTGTGACATATAGGAGACATGATGAAAATAACAACGTAGAAGAGTTCAAATCCTTGTTCTTGTCCAAATTGCATTTTCCTTGTTCAACCGATATTCAGTTTAATTTAATTTCCAATGTTAACTCTCTACTCATAATGAATATTCCTTTAAAAGGCATTCCTGTGTTTCAAAACTTAATTCATATTCAGCTATGGTGTATTGGCTTCTTTCAAGGCTGGGATGGTGTAGTAGATTTTCTCAAGAATTGTCCCAAGCTTCAAATTCTTTATATTAGAAAGTGGTGCTCCTGCTTATCGATTGAATGGAAATGCCCGATTTCAGTTCCTGAATGTGTTTCGTCTCGCCTCAGATCATGTACTATTTGGAATTGTGATGGCTCAGCAAATGATCTTGCTTTCGCAACATATATTTTGCAGAATGCAAGGCTTTTACAGGTCATGGCAATCAATGGTATTTTTCAATCTTCAAATGGAATGCAAAAGCCTCAAATTATACAAGAGTTATCCTCCTGCCCAAGGATGTCTCCTGAATGCAAACTTTCATTTGCATTGAAGTAG
Protein sequence

>MsG0580027440.01.T01

MENSVAPDDMISNLPDELLCHILSFLPTKLAFTTTLLSKSWAPLCNSLTALRLDDETVKDADSFNRFRCFVDKLMLTPHATNQPIKTFYLKLSRFYEVEHRSFFYAWLEAAKQRRVEEFHLLLDNVTLKNLTIFTSRTLVVVKLECLKVEGENLCVNLPNLKTLHLREICFETRNNFMKLLKACPILQDLRTSFVTYRRHDENNNVEEFKSLFLSKLHFPCSTDIQFNLISNVNSLLIMNIPLKGIPVFQNLIHIQLWCIGFFQGWDGVVDFLKNCPKLQILYIRKWCSCLSIEWKCPISVPECVSSRLRSCTIWNCDGSANDLAFATYILQNARLLQVMAINGIFQSSNGMQKPQIIQELSSCPRMSPECKLSFALK*