AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033396.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033396.01.T01 MTR_6g045333 87.775 409 50 0 18 426 1 409 0.0 737
MsG0680033396.01.T01 MTR_3g071850 78.495 372 80 0 55 426 1 372 0.0 595
MsG0680033396.01.T01 MTR_5g007410 54.400 375 161 5 57 426 2 371 2.88e-127 375
MsG0680033396.01.T01 MTR_5g045510 53.760 359 140 5 68 426 3 335 3.28e-116 344
MsG0680033396.01.T01 MTR_0009s0080 53.221 357 160 6 72 426 12 363 6.31e-114 340
MsG0680033396.01.T01 MTR_2g036470 53.279 366 150 9 70 426 6 359 5.94e-113 337
MsG0680033396.01.T01 MTR_5g045170 50.140 357 160 7 75 426 11 354 5.80e-105 317
MsG0680033396.01.T01 MTR_3g071790 79.703 202 41 0 223 424 1 202 2.35e-103 305
MsG0680033396.01.T01 MTR_5g039490 49.304 359 139 8 75 426 17 339 1.14e-96 295
MsG0680033396.01.T01 MTR_5g039470 48.521 338 158 7 94 426 1 327 1.17e-92 283
MsG0680033396.01.T01 MTR_5g039450 46.089 358 158 8 75 426 3 331 8.64e-92 281
MsG0680033396.01.T01 MTR_5g031970 43.944 355 148 6 75 426 13 319 2.37e-83 259
MsG0680033396.01.T01 MTR_1g066830 40.395 354 200 6 75 426 5 349 3.84e-79 250
MsG0680033396.01.T01 MTR_5g063950 43.220 354 160 10 78 426 8 325 1.64e-73 234
MsG0680033396.01.T01 MTR_5g073420 38.068 352 195 7 77 426 10 340 5.31e-73 234
MsG0680033396.01.T01 MTR_5g058100 40.563 355 194 9 75 426 6 346 9.40e-73 233
MsG0680033396.01.T01 MTR_7g026500 40.111 359 193 11 78 426 14 360 5.73e-71 229
MsG0680033396.01.T01 MTR_1g059860 47.588 311 121 9 148 423 8 311 5.58e-70 224
MsG0680033396.01.T01 MTR_1089s0010 38.636 352 197 8 76 426 6 339 1.31e-66 217
MsG0680033396.01.T01 MTR_6g040270 37.604 359 201 9 72 426 2 341 1.26e-63 209
MsG0680033396.01.T01 MTR_1g108820 39.554 359 189 13 77 425 7 347 4.12e-63 208
MsG0680033396.01.T01 MTR_5g058000 38.352 352 194 8 77 426 7 337 5.02e-63 208
MsG0680033396.01.T01 MTR_1g085120 39.944 358 191 10 78 426 92 434 7.16e-63 210
MsG0680033396.01.T01 MTR_1g085120 39.944 358 191 10 78 426 167 509 1.96e-62 211
MsG0680033396.01.T01 MTR_6g022500 38.202 356 198 11 77 426 100 439 1.40e-61 207
MsG0680033396.01.T01 MTR_6g011460 38.843 363 197 7 70 426 38 381 2.53e-61 205
MsG0680033396.01.T01 MTR_4g039440 36.313 358 202 9 77 426 33 372 2.76e-56 191
MsG0680033396.01.T01 MTR_7g055943 36.314 369 207 11 70 426 32 384 4.46e-56 191
MsG0680033396.01.T01 MTR_1g108800 38.333 360 149 12 77 425 7 304 5.50e-52 178
MsG0680033396.01.T01 MTR_5g065100 38.068 352 166 11 79 426 9 312 3.19e-51 178
MsG0680033396.01.T01 MTR_5g061410 38.851 296 151 7 75 370 2 267 1.98e-50 172
MsG0680033396.01.T01 MTR_5g073370 34.078 358 208 9 78 426 5 343 3.48e-49 172
MsG0680033396.01.T01 MTR_5g061680 34.579 321 173 5 77 397 10 293 4.19e-49 170
MsG0680033396.01.T01 MTR_6g022360 33.889 360 198 10 77 426 42 371 1.64e-47 168
MsG0680033396.01.T01 MTR_1g108820 37.500 304 168 10 77 370 7 298 8.74e-46 162
MsG0680033396.01.T01 MTR_1g085120 38.411 302 165 9 78 370 179 468 2.27e-43 158
MsG0680033396.01.T01 MTR_3g107100 32.044 362 213 11 78 426 11 352 1.04e-42 155
MsG0680033396.01.T01 MTR_5g073340 35.045 331 170 12 77 399 7 300 3.75e-42 151
MsG0680033396.01.T01 MTR_5g054920 43.575 179 94 3 248 426 2 173 2.85e-41 145
MsG0680033396.01.T01 MTR_2g007450 30.905 398 231 10 63 426 1 388 8.99e-41 150
MsG0680033396.01.T01 MTR_3g107120 33.422 374 212 12 73 426 4 360 2.62e-40 148
MsG0680033396.01.T01 MTR_2g007400 31.937 382 211 13 75 426 9 371 8.80e-40 147
MsG0680033396.01.T01 MTR_5g024060 61.739 115 42 1 312 426 62 174 1.13e-39 143
MsG0680033396.01.T01 MTR_7g098510 32.800 375 214 10 67 426 3 354 3.23e-39 145
MsG0680033396.01.T01 MTR_7g056433 32.172 373 223 12 63 426 1 352 7.12e-39 144
MsG0680033396.01.T01 MTR_7g115270 32.345 371 210 13 78 425 12 364 9.94e-39 144
MsG0680033396.01.T01 MTR_4g098590 32.418 364 205 14 85 426 6 350 1.57e-38 143
MsG0680033396.01.T01 MTR_7g098570 33.069 378 210 12 67 426 4 356 4.29e-38 144
MsG0680033396.01.T01 MTR_3g107160 29.947 374 210 12 76 426 8 352 5.50e-38 142
MsG0680033396.01.T01 MTR_1g041245 33.333 366 203 15 77 426 10 350 6.06e-38 142
MsG0680033396.01.T01 MTR_5g083890 31.854 383 209 12 78 426 6 370 6.99e-38 144
MsG0680033396.01.T01 MTR_7g075820 31.383 376 212 12 78 426 6 362 8.38e-38 141
MsG0680033396.01.T01 MTR_3g040700 29.319 382 229 11 52 423 17 367 1.63e-37 142
MsG0680033396.01.T01 MTR_1g053025 32.075 371 217 15 77 426 1 357 1.82e-37 140
MsG0680033396.01.T01 MTR_7g033990 31.351 370 212 10 72 426 5 347 1.13e-36 139
MsG0680033396.01.T01 MTR_0492s0020 31.198 359 206 9 78 426 86 413 3.01e-36 138
MsG0680033396.01.T01 MTR_0543s0010 31.198 359 206 9 78 426 86 413 3.94e-36 138
MsG0680033396.01.T01 MTR_6g044560 32.581 399 197 14 64 426 162 524 5.73e-36 139
MsG0680033396.01.T01 MTR_6g022520 36.585 287 165 8 146 426 1 276 6.65e-36 134
MsG0680033396.01.T01 MTR_6g044572 32.552 384 189 13 77 426 1 348 7.55e-36 136
MsG0680033396.01.T01 MTR_3g108560 31.755 359 207 11 78 425 20 351 2.12e-35 135
MsG0680033396.01.T01 MTR_7g098480 32.249 369 222 11 67 426 3 352 2.92e-34 133
MsG0680033396.01.T01 MTR_3g023630 32.123 358 216 9 75 426 5 341 1.10e-33 130
MsG0680033396.01.T01 MTR_7g088260 31.111 360 211 12 78 425 91 425 2.23e-33 130
MsG0680033396.01.T01 MTR_5g008920 29.944 354 226 9 77 426 11 346 3.20e-33 129
MsG0680033396.01.T01 MTR_3g036250 29.363 361 215 10 76 426 3 333 5.03e-33 128
MsG0680033396.01.T01 MTR_7g033915 28.453 362 205 10 77 426 10 329 1.21e-32 127
MsG0680033396.01.T01 MTR_7g007080 31.335 367 213 12 78 426 4 349 1.33e-32 127
MsG0680033396.01.T01 MTR_7g034115 28.809 361 223 11 77 426 10 347 2.22e-32 126
MsG0680033396.01.T01 MTR_7g032370 31.429 350 186 15 93 426 5 316 5.68e-32 124
MsG0680033396.01.T01 MTR_7g056277 31.638 354 216 9 78 426 259 591 7.14e-32 128
MsG0680033396.01.T01 MTR_2g008310 30.000 370 208 11 77 426 1 339 8.15e-32 125
MsG0680033396.01.T01 MTR_7g032380 30.278 360 192 13 77 426 10 320 1.05e-31 124
MsG0680033396.01.T01 MTR_7g056287 31.073 354 218 9 78 426 3 335 4.27e-31 122
MsG0680033396.01.T01 MTR_5g008950 28.895 353 212 11 85 426 6 330 7.33e-31 122
MsG0680033396.01.T01 MTR_2g007500 29.944 354 199 14 71 405 7 330 1.08e-30 120
MsG0680033396.01.T01 MTR_3g108150 30.748 361 213 10 78 425 13 349 1.27e-30 122
MsG0680033396.01.T01 MTR_5g024050 66.292 89 29 1 223 310 1 89 1.72e-30 113
MsG0680033396.01.T01 MTR_3g105060 29.609 358 214 10 77 426 13 340 4.46e-30 120
MsG0680033396.01.T01 MTR_1377s0010 45.038 131 60 3 296 426 5 123 3.84e-29 111
MsG0680033396.01.T01 MTR_1g107385 29.280 403 238 12 53 426 7 391 9.50e-29 117
MsG0680033396.01.T01 MTR_2g005990 29.815 379 217 11 77 426 5 363 1.79e-28 115
MsG0680033396.01.T01 MTR_7g034120 31.786 280 161 9 156 422 10 272 9.80e-28 112
MsG0680033396.01.T01 MTR_2g008320 30.933 375 208 16 75 426 49 395 1.62e-27 114
MsG0680033396.01.T01 MTR_7g034110 30.347 346 170 9 77 412 10 294 2.57e-27 112
MsG0680033396.01.T01 MTR_3g467400 27.913 369 207 11 77 426 2 330 3.26e-27 112
MsG0680033396.01.T01 MTR_3g095600 33.047 233 132 3 77 308 3 212 1.02e-26 108
MsG0680033396.01.T01 MTR_7g083740 27.654 358 211 7 77 426 16 333 2.22e-26 109
MsG0680033396.01.T01 MTR_7g007340 30.933 375 198 15 63 426 1 325 3.53e-26 108
MsG0680033396.01.T01 MTR_7g056430 28.297 364 216 11 71 426 2 328 6.32e-26 111
MsG0680033396.01.T01 MTR_7g056420 28.297 364 216 11 71 426 2 328 9.05e-26 110
MsG0680033396.01.T01 MTR_3g099830 28.457 376 203 15 75 426 9 342 2.77e-25 106
MsG0680033396.01.T01 MTR_7g022105 28.351 388 236 11 57 426 26 389 3.30e-25 107
MsG0680033396.01.T01 MTR_7g056020 28.836 378 182 13 78 425 16 336 1.90e-24 106
MsG0680033396.01.T01 MTR_5g076150 35.849 212 114 7 200 395 22 227 8.12e-24 99.8
MsG0680033396.01.T01 MTR_5g084070 29.500 400 215 15 75 426 10 390 1.07e-23 102
MsG0680033396.01.T01 MTR_2g007360 29.101 378 196 15 75 426 9 340 2.02e-23 101
MsG0680033396.01.T01 MTR_7g021990 27.436 390 237 12 57 426 25 388 2.31e-23 102
MsG0680033396.01.T01 MTR_5g033200 41.259 143 71 5 284 426 13 142 4.05e-23 96.3
MsG0680033396.01.T01 MTR_7g021950 27.436 390 237 12 57 426 25 388 1.03e-22 100
MsG0680033396.01.T01 MTR_3g095640 37.500 160 94 3 77 231 17 175 1.13e-22 94.7
MsG0680033396.01.T01 MTR_3g082890 26.738 374 231 11 76 425 95 449 1.48e-22 100
MsG0680033396.01.T01 MTR_3g108560 30.592 304 174 10 78 370 20 297 1.81e-22 97.8
MsG0680033396.01.T01 MTR_3g087260 29.206 428 209 17 76 426 10 420 2.69e-22 99.0
MsG0680033396.01.T01 MTR_3g095630 39.041 146 70 4 284 426 18 147 3.81e-22 93.6
MsG0680033396.01.T01 MTR_5g012840 27.463 335 167 11 103 426 14 283 1.32e-21 95.1
MsG0680033396.01.T01 MTR_7g060470 29.058 382 209 14 78 426 3 355 1.39e-21 96.3
MsG0680033396.01.T01 MTR_5g080710 26.355 406 238 13 69 426 24 416 1.42e-21 97.1
MsG0680033396.01.T01 MTR_7g056447 36.364 187 107 4 78 261 9 186 2.85e-21 94.0
MsG0680033396.01.T01 MTR_8g058965 27.404 416 228 17 77 426 12 419 1.56e-20 94.0
MsG0680033396.01.T01 MTR_3g109982 38.660 194 105 6 74 264 9 191 4.62e-20 93.2
MsG0680033396.01.T01 MTR_3g109982 32.766 235 132 8 200 425 220 437 3.64e-18 87.4
MsG0680033396.01.T01 MTR_3g110010 38.660 194 105 6 74 264 9 191 9.65e-20 92.4
MsG0680033396.01.T01 MTR_3g082890 25.061 411 228 12 76 425 15 406 2.37e-19 90.1
MsG0680033396.01.T01 MTR_2g007550 27.901 362 194 11 71 426 7 307 1.11e-18 87.0
MsG0680033396.01.T01 MTR_5g013500 28.803 309 168 12 138 425 50 327 1.20e-18 87.4
MsG0680033396.01.T01 MTR_5g058350 33.668 199 102 5 72 270 2 170 2.78e-18 82.4
MsG0680033396.01.T01 MTR_7g075800 24.877 406 225 17 78 426 9 391 1.29e-17 85.5
MsG0680033396.01.T01 MTR_8g077460 25.967 362 223 11 78 426 10 339 2.00e-17 84.0
MsG0680033396.01.T01 MTR_8g085430 31.658 199 117 6 77 264 10 200 2.86e-17 82.8
MsG0680033396.01.T01 MTR_8g085430 34.615 104 61 2 328 426 191 292 2.23e-11 65.1
MsG0680033396.01.T01 MTR_4g080610 25.978 358 202 11 80 425 14 320 2.93e-17 83.2
MsG0680033396.01.T01 MTR_5g044790 43.966 116 31 4 341 426 292 403 3.98e-17 83.6
MsG0680033396.01.T01 MTR_5g073400 40.476 126 70 3 153 277 4 125 4.04e-17 78.2
MsG0680033396.01.T01 MTR_8g467800 26.329 414 226 15 78 426 20 419 1.10e-16 82.0
MsG0680033396.01.T01 MTR_7g114710 26.146 371 201 12 77 426 12 330 1.21e-16 81.3
MsG0680033396.01.T01 MTR_6g022390 36.585 123 73 1 77 194 4 126 1.25e-16 77.0
MsG0680033396.01.T01 MTR_4g032730 24.242 429 236 15 77 426 14 432 5.38e-16 80.1
MsG0680033396.01.T01 MTR_0571s0010 40.476 84 47 1 78 161 32 112 4.73e-15 71.6
MsG0680033396.01.T01 MTR_8g445780 23.000 400 235 13 72 415 7 389 1.37e-14 75.5
MsG0680033396.01.T01 MTR_5g092960 23.487 413 251 14 77 426 18 428 1.39e-14 75.9
MsG0680033396.01.T01 MTR_4g134150 32.105 190 112 5 76 264 15 188 2.05e-14 72.8
MsG0680033396.01.T01 MTR_8g468760 24.802 379 250 17 77 426 8 380 2.90e-14 74.7
MsG0680033396.01.T01 MTR_8g070950 25.791 411 227 17 72 426 9 397 3.83e-14 74.3
MsG0680033396.01.T01 MTR_8g014160 24.607 382 228 14 75 426 38 389 4.71e-14 73.9
MsG0680033396.01.T01 MTR_6g083130 44.565 92 39 1 176 267 233 312 6.40e-14 72.8
MsG0680033396.01.T01 MTR_7g033945 32.000 175 101 6 77 242 10 175 7.50e-14 70.1
MsG0680033396.01.T01 MTR_6g045307 34.302 172 93 6 175 327 750 920 1.09e-13 73.6
MsG0680033396.01.T01 MTR_3g106960 34.815 135 69 6 298 426 46 167 1.31e-13 70.5
MsG0680033396.01.T01 MTR_7g007370 33.051 236 129 9 202 426 96 313 1.66e-13 71.6
MsG0680033396.01.T01 MTR_3g114200 37.195 164 86 7 64 222 8 159 1.96e-13 68.2
MsG0680033396.01.T01 MTR_6g029350 30.851 188 94 7 252 426 2 166 3.88e-13 69.3
MsG0680033396.01.T01 MTR_7g056280 27.027 185 116 4 252 426 367 542 9.09e-13 70.5
MsG0680033396.01.T01 MTR_4g056030 30.964 197 118 6 78 265 9 196 1.30e-12 69.7
MsG0680033396.01.T01 MTR_8g468840 23.317 416 239 15 78 426 14 416 2.84e-12 68.6
MsG0680033396.01.T01 MTR_2g007090 28.019 207 115 7 226 426 84 262 3.51e-12 67.0
MsG0680033396.01.T01 MTR_2g082800 28.571 217 118 9 78 266 27 234 3.57e-12 68.2
MsG0680033396.01.T01 MTR_8g062270 23.095 420 239 18 77 426 15 420 3.72e-12 68.2
MsG0680033396.01.T01 MTR_4g056020 30.928 194 116 7 78 262 9 193 4.01e-12 68.2
MsG0680033396.01.T01 MTR_8g062080 30.653 199 120 9 78 266 23 213 4.77e-12 67.8
MsG0680033396.01.T01 MTR_8g467790 29.064 203 119 8 77 264 147 339 1.06e-11 67.0
MsG0680033396.01.T01 MTR_8g062310 25.063 395 228 16 75 426 22 391 1.17e-11 66.6
MsG0680033396.01.T01 MTR_6g033095 45.946 74 37 1 353 426 110 180 1.25e-11 63.9
MsG0680033396.01.T01 MTR_7g056417 52.941 68 32 0 197 264 4 71 1.34e-11 62.8
MsG0680033396.01.T01 MTR_8g468810 28.922 204 133 8 78 272 25 225 2.04e-11 65.1
MsG0680033396.01.T01 MTR_8g058970 28.251 223 133 10 69 266 10 230 2.09e-11 65.9
MsG0680033396.01.T01 MTR_8g467800 31.841 201 124 7 78 274 20 211 2.12e-11 65.5
MsG0680033396.01.T01 MTR_5g045700 47.059 68 26 1 57 124 2 59 2.47e-11 59.3
MsG0680033396.01.T01 MTR_8g468810 28.922 204 133 8 78 272 25 225 2.53e-11 65.1
MsG0680033396.01.T01 MTR_8g468810 28.922 204 133 8 78 272 25 225 2.70e-11 64.7
MsG0680033396.01.T01 MTR_8g468810 28.922 204 133 8 78 272 25 225 2.78e-11 65.1
MsG0680033396.01.T01 MTR_3g094980 37.805 82 48 2 348 426 32 113 2.89e-11 62.4
MsG0680033396.01.T01 MTR_1g038710 33.498 203 111 9 74 262 15 207 3.06e-11 65.5
MsG0680033396.01.T01 MTR_5g024040 50.000 58 27 1 61 116 3 60 3.50e-11 58.9
MsG0680033396.01.T01 MTR_8g062010 29.268 205 125 8 72 266 3 197 3.60e-11 65.1
MsG0680033396.01.T01 MTR_4g093690 27.801 241 143 10 78 306 18 239 3.78e-11 63.9
MsG0680033396.01.T01 MTR_5g092960 25.098 255 173 7 77 315 18 270 7.09e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033396.01.T01 AT4G26340 27.204 397 228 13 77 426 1 383 2.16e-20 93.2
MsG0680033396.01.T01 AT5G56370 26.221 389 235 11 77 426 1 376 2.04e-19 90.1
MsG0680033396.01.T01 AT5G56370 26.221 389 235 11 77 426 1 376 2.04e-19 90.1
MsG0680033396.01.T01 AT5G56560 25.441 397 227 12 80 426 7 384 1.21e-17 84.7
MsG0680033396.01.T01 AT3G51530 27.363 402 219 15 78 426 30 411 1.74e-17 84.7
MsG0680033396.01.T01 AT5G22670 33.161 193 111 5 78 265 11 190 3.04e-17 84.0
MsG0680033396.01.T01 AT4G00160 27.160 405 219 17 78 426 16 400 3.95e-17 83.6
MsG0680033396.01.T01 AT5G56690 24.750 400 240 12 80 426 4 395 2.62e-16 80.9
MsG0680033396.01.T01 AT5G60610 25.248 404 226 12 77 426 1 382 7.79e-16 79.3
MsG0680033396.01.T01 AT5G60610 25.248 404 226 12 77 426 1 382 7.79e-16 79.3
MsG0680033396.01.T01 AT5G56420 26.992 389 227 15 78 422 6 381 9.29e-16 79.3
MsG0680033396.01.T01 AT5G56420 26.992 389 227 15 78 422 6 381 9.29e-16 79.3
MsG0680033396.01.T01 AT5G56420 26.992 389 227 15 78 422 6 381 9.29e-16 79.3
MsG0680033396.01.T01 AT4G26350 25.490 408 230 12 77 426 1 392 1.05e-15 79.0
MsG0680033396.01.T01 AT4G14103 35.385 195 106 6 78 262 8 192 2.34e-15 77.8
MsG0680033396.01.T01 AT4G14103 35.385 195 106 6 78 262 8 192 2.34e-15 77.8
MsG0680033396.01.T01 AT4G14103 35.385 195 106 6 78 262 8 192 3.02e-15 77.8
MsG0680033396.01.T01 AT3G52680 27.833 406 213 19 78 426 21 403 6.50e-15 76.6
MsG0680033396.01.T01 AT5G56370 34.031 191 108 6 77 261 1 179 7.98e-15 75.5
MsG0680033396.01.T01 AT5G41830 29.851 201 120 5 78 262 13 208 4.16e-14 74.7
MsG0680033396.01.T01 AT3G44060 23.250 400 234 13 85 426 6 390 1.21e-13 72.8
MsG0680033396.01.T01 AT4G27050 28.713 202 123 5 78 262 4 201 1.36e-13 72.8
MsG0680033396.01.T01 AT4G27050 28.713 202 123 5 78 262 4 201 1.36e-13 72.8
MsG0680033396.01.T01 AT4G27050 28.713 202 123 5 78 262 4 201 1.36e-13 72.8
MsG0680033396.01.T01 AT4G27050 28.713 202 123 5 78 262 4 201 1.36e-13 72.8
MsG0680033396.01.T01 AT4G27050 28.713 202 123 5 78 262 4 201 1.36e-13 72.8
MsG0680033396.01.T01 AT3G58880 33.659 205 117 8 77 270 2 198 1.49e-13 72.8
MsG0680033396.01.T01 AT2G26860 26.866 402 224 15 77 422 1 388 2.31e-13 71.6
MsG0680033396.01.T01 AT2G26860 26.866 402 224 15 77 422 1 388 2.31e-13 71.6
MsG0680033396.01.T01 AT4G00315 32.292 192 118 6 77 262 1 186 2.32e-13 72.0
MsG0680033396.01.T01 AT5G56440 25.000 408 233 16 77 426 1 393 2.61e-13 71.6
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 4.31e-13 70.1
MsG0680033396.01.T01 AT4G10400 27.273 385 226 17 77 422 1 370 5.00e-13 70.9
MsG0680033396.01.T01 AT4G10400 27.273 385 226 17 77 422 1 370 5.00e-13 70.9
MsG0680033396.01.T01 AT4G10400 27.273 385 226 17 77 422 1 370 5.00e-13 70.9
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 7.30e-13 70.1
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 7.30e-13 70.1
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 7.37e-13 70.5
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 8.30e-13 70.1
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 8.30e-13 70.1
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 8.30e-13 70.1
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 12 202 8.30e-13 70.1
MsG0680033396.01.T01 AT1G06630 30.052 193 125 5 78 262 21 211 9.75e-13 70.1
MsG0680033396.01.T01 AT5G22610 24.812 399 233 15 78 426 18 399 1.23e-12 69.7
MsG0680033396.01.T01 AT3G59240 32.653 196 112 9 78 262 8 194 1.43e-12 69.7
MsG0680033396.01.T01 AT5G56380 33.333 198 110 7 77 262 1 188 1.64e-12 69.3
MsG0680033396.01.T01 AT5G56380 33.333 198 110 7 77 262 1 188 1.64e-12 69.3
MsG0680033396.01.T01 AT2G26030 31.217 189 113 7 78 260 4 181 1.88e-12 69.3
MsG0680033396.01.T01 AT2G26030 31.217 189 113 7 78 260 4 181 1.88e-12 69.3
MsG0680033396.01.T01 AT3G56780 30.220 182 109 6 80 256 9 177 1.92e-12 69.3
MsG0680033396.01.T01 AT2G26030 31.217 189 113 7 78 260 4 181 1.99e-12 68.9
MsG0680033396.01.T01 AT3G56780 30.220 182 109 6 80 256 9 177 2.01e-12 68.9
MsG0680033396.01.T01 AT2G29910 29.189 185 119 4 78 260 5 179 3.38e-12 67.8
MsG0680033396.01.T01 AT2G29910 29.189 185 119 4 78 260 5 179 3.38e-12 67.8
MsG0680033396.01.T01 AT2G29910 29.189 185 119 4 78 260 5 179 4.43e-12 67.4
MsG0680033396.01.T01 AT2G29910 29.189 185 119 4 78 260 5 179 4.43e-12 67.4
MsG0680033396.01.T01 AT2G29910 29.189 185 119 4 78 260 5 179 4.43e-12 67.4
MsG0680033396.01.T01 AT2G29910 29.189 185 119 4 78 260 5 179 4.43e-12 67.4
MsG0680033396.01.T01 AT3G56780 30.220 182 109 6 80 256 9 177 4.64e-12 67.8
MsG0680033396.01.T01 AT2G29910 29.189 185 119 4 78 260 29 203 8.11e-12 67.0
MsG0680033396.01.T01 AT4G22280 30.366 191 117 6 77 262 1 180 9.45e-12 67.0
MsG0680033396.01.T01 AT5G02930 30.457 197 116 7 77 269 27 206 9.68e-12 67.0
MsG0680033396.01.T01 AT3G26922 31.088 193 111 7 78 262 14 192 1.03e-11 65.9
MsG0680033396.01.T01 AT3G26922 31.088 193 111 7 78 262 14 192 1.03e-11 65.9
MsG0680033396.01.T01 AT4G22280 30.366 191 117 6 77 262 1 180 1.06e-11 66.2
MsG0680033396.01.T01 AT4G09920 30.319 188 119 5 77 260 1 180 1.24e-11 65.9
MsG0680033396.01.T01 AT4G09920 30.319 188 119 5 77 260 1 180 1.24e-11 65.9
MsG0680033396.01.T01 AT4G15060 29.231 195 125 4 74 262 22 209 1.83e-11 65.9
MsG0680033396.01.T01 AT1G48400 28.141 199 126 6 73 262 5 195 2.98e-11 65.5
MsG0680033396.01.T01 AT1G48400 28.141 199 126 6 73 262 5 195 3.52e-11 65.5
MsG0680033396.01.T01 AT4G09920 30.052 193 113 6 77 260 1 180 4.04e-11 63.9
MsG0680033396.01.T01 AT4G09920 30.052 193 113 6 77 260 1 180 4.04e-11 63.9
MsG0680033396.01.T01 AT4G09920 30.052 193 113 6 77 260 1 180 4.04e-11 63.9
MsG0680033396.01.T01 AT3G49150 32.653 196 119 8 74 262 12 201 4.45e-11 65.1
MsG0680033396.01.T01 AT3G52680 32.642 193 112 6 78 263 21 202 5.37e-11 64.3
MsG0680033396.01.T01 AT4G15060 28.718 195 126 4 74 262 168 355 8.81e-11 64.3
MsG0680033396.01.T01 AT5G53640 26.702 191 118 4 78 262 22 196 9.51e-11 62.0

Find 82 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGAGATATTGACACAATT+TGG 0.142065 6:-63893915 None:intergenic
GGCTTTAATCAACTTGTATA+AGG 0.185708 6:-63894753 None:intergenic
ACACATTCGGGAACTGTATA+TGG 0.193781 6:-63895529 None:intergenic
TAATTGAACTTCGACTATTT+TGG 0.213375 6:+63895277 MsG0680033396.01.T01:CDS
TCAAGTGTCGATACGATTTC+TGG 0.220107 6:+63894387 MsG0680033396.01.T01:CDS
TGAGCGGAACGTCGAATAAA+TGG 0.261330 6:-63894781 None:intergenic
GTGCAATTTCTAACTGTAAC+AGG 0.287183 6:+63894818 MsG0680033396.01.T01:CDS
GTTGGTTGGCGAAGAAGGTT+GGG 0.291673 6:-63894083 None:intergenic
AAATCTAAAATCTGCTTCTA+TGG 0.297622 6:-63895593 None:intergenic
AATATCTCTTATTGTGTGTT+GGG 0.302085 6:-63894106 None:intergenic
ATATGAATTGATTTCTTCAT+TGG 0.308982 6:-63895226 None:intergenic
TTCGACCCATTGATTGATAC+TGG 0.315949 6:-63894423 None:intergenic
ATTGAAAGACTTTGTAGTTT+GGG 0.316509 6:-63895354 None:intergenic
AATTGAAAGACTTTGTAGTT+TGG 0.357804 6:-63895355 None:intergenic
GCTTTAATCAACTTGTATAA+GGG 0.364318 6:-63894752 None:intergenic
TTGGGGTTGGTTGGCGAAGA+AGG 0.364375 6:-63894088 None:intergenic
GGTTGGTTGGCGAAGAAGGT+TGG 0.373396 6:-63894084 None:intergenic
GAATATCTCTTATTGTGTGT+TGG 0.377954 6:-63894107 None:intergenic
TCTTCCATTGGCGTCGAGTA+TGG 0.391437 6:-63894053 None:intergenic
TTTGTAGTTTGGGACAATAA+TGG 0.396867 6:-63895344 None:intergenic
CTCTTATTGTGTGTTGGGGT+TGG 0.397575 6:-63894101 None:intergenic
TATGAATTGATTTCTTCATT+GGG 0.408255 6:-63895225 None:intergenic
GTGAGATATTGACACAATTT+GGG 0.409670 6:-63893914 None:intergenic
TCAAATCAAGTGTCGGGGCT+GGG 0.418718 6:+63894705 MsG0680033396.01.T01:CDS
TAAATGTGATGAAACACATT+CGG 0.420317 6:-63895542 None:intergenic
ACTATTCCAGTATCAATCAA+TGG 0.421521 6:+63894417 MsG0680033396.01.T01:CDS
TTTCCAATCTTCAATGACTT+TGG 0.423956 6:-63895503 None:intergenic
TCATCTGAGTGATGTTTGTT+TGG 0.425779 6:+63894613 MsG0680033396.01.T01:CDS
TTGGTTGGCGAAGAAGGTTG+GGG 0.431904 6:-63894082 None:intergenic
GTCAAATCAAGTGTCGGGGC+TGG 0.439304 6:+63894704 MsG0680033396.01.T01:CDS
GTCGGGGCTGGGGTTACAGC+TGG 0.440241 6:+63894716 MsG0680033396.01.T01:CDS
GTCTCTGATTGACAGTGGAC+AGG 0.445659 6:+63895469 MsG0680033396.01.T01:intron
CATATGTCAAATCAAGTGTC+GGG 0.446451 6:+63894699 MsG0680033396.01.T01:CDS
ATCCGGGTGTCCCATGTTAG+AGG 0.451333 6:+63894664 MsG0680033396.01.T01:CDS
AAATGTGATGAAACACATTC+GGG 0.451697 6:-63895541 None:intergenic
GACCCACCTCTTTGAAAGAA+TGG 0.452124 6:-63894216 None:intergenic
CTACCAAAGTCATTGAAGAT+TGG 0.453055 6:+63895500 MsG0680033396.01.T01:CDS
TTGATGACTGCATTCATGAT+TGG 0.456959 6:+63895301 MsG0680033396.01.T01:CDS
GATTTAAAGAAACTTATATC+CGG 0.461392 6:+63894647 MsG0680033396.01.T01:CDS
GGATTTGAGTGTCTGGTGTT+GGG 0.469733 6:-63894357 None:intergenic
GATGAAAGGATTTGAGTGTC+TGG 0.475611 6:-63894364 None:intergenic
CGATTTCGTTCACGCCACTT+TGG 0.481173 6:-63894280 None:intergenic
ACAAAGTCTTTCAATTTCAA+AGG 0.484316 6:+63895362 MsG0680033396.01.T01:CDS
AACGTCGAATAAATGGATAT+TGG 0.485369 6:-63894774 None:intergenic
AGGATTTGAGTGTCTGGTGT+TGG 0.491067 6:-63894358 None:intergenic
CACATTCGGGAACTGTATAT+GGG 0.491537 6:-63895528 None:intergenic
CAAATCAAGTGTCGGGGCTG+GGG 0.497297 6:+63894706 MsG0680033396.01.T01:CDS
GTTCTGAAAGTGTCTCTGAT+TGG 0.503786 6:-63894191 None:intergenic
TATTGTGTGTTGGGGTTGGT+TGG 0.503908 6:-63894097 None:intergenic
AACCTCTAACATGGGACACC+CGG 0.506662 6:-63894666 None:intergenic
CTATTCCAGTATCAATCAAT+GGG 0.513388 6:+63894418 MsG0680033396.01.T01:CDS
GATGAACTTCTGTAAAATGT+TGG 0.527987 6:+63894310 MsG0680033396.01.T01:CDS
GGGGCTGGGGTTACAGCTGG+AGG 0.530791 6:+63894719 MsG0680033396.01.T01:CDS
GCTTCCATACTCGACGCCAA+TGG 0.532919 6:+63894049 MsG0680033396.01.T01:CDS
GAACTACCATTCTTTCAAAG+AGG 0.537018 6:+63894210 MsG0680033396.01.T01:CDS
CTACCATTCTTTCAAAGAGG+TGG 0.537737 6:+63894213 MsG0680033396.01.T01:CDS
TTTGACTTAGTATGTCGTCT+TGG 0.547400 6:-63894154 None:intergenic
ATTTAAAGAAACTTATATCC+GGG 0.547410 6:+63894648 MsG0680033396.01.T01:CDS
TACCATTCTTTCAAAGAGGT+GGG 0.550479 6:+63894214 MsG0680033396.01.T01:CDS
CACTTTGGATATCGTTGAAG+TGG 0.554427 6:-63894265 None:intergenic
ATATCTCTTATTGTGTGTTG+GGG 0.565444 6:-63894105 None:intergenic
GCATATGTCAAATCAAGTGT+CGG 0.565631 6:+63894698 MsG0680033396.01.T01:CDS
AGTATGGAAGCGATCTATTG+AGG 0.568176 6:-63894037 None:intergenic
ATGAATTGATTTCTTCATTG+GGG 0.572211 6:-63895224 None:intergenic
TGTTTGTTTGGTTGATATCG+AGG 0.573126 6:+63894625 MsG0680033396.01.T01:CDS
AGTGTCTGGTGTTGGGCGCG+TGG 0.575502 6:-63894350 None:intergenic
TGCAATTTCTAACTGTAACA+GGG 0.580241 6:+63894819 MsG0680033396.01.T01:CDS
AACAGCAATACGTCGACACG+TGG 0.584263 6:+63894445 MsG0680033396.01.T01:CDS
CTGCATTCATGATTGGTATG+AGG 0.589890 6:+63895308 MsG0680033396.01.T01:CDS
CGATGACTACAATGAAGAGT+GGG 0.596078 6:-63894002 None:intergenic
TCGATGACTACAATGAAGAG+TGG 0.597219 6:-63894003 None:intergenic
TTTCTGTTGTAAAACACTCG+TGG 0.610475 6:+63894517 MsG0680033396.01.T01:CDS
AGCAATACGTCGACACGTGG+AGG 0.613366 6:+63894448 MsG0680033396.01.T01:CDS
CACTTCAACGATATCCAAAG+TGG 0.613607 6:+63894266 MsG0680033396.01.T01:CDS
GAAATCAATTCATATTACAA+AGG 0.621488 6:+63895234 MsG0680033396.01.T01:CDS
GTATCGACACTTGAGATGAA+AGG 0.626954 6:-63894378 None:intergenic
GCAATTTCTAACTGTAACAG+GGG 0.628391 6:+63894820 MsG0680033396.01.T01:CDS
GCGTGAACGAAATCGAGGCA+TGG 0.635649 6:+63894288 MsG0680033396.01.T01:CDS
AAGTGGCGTGAACGAAATCG+AGG 0.671413 6:+63894283 MsG0680033396.01.T01:CDS
ACATTTGAAACTGCTCTGAG+CGG 0.681506 6:-63894797 None:intergenic
ATATGTCAAATCAAGTGTCG+GGG 0.682109 6:+63894700 MsG0680033396.01.T01:CDS
GAAGACGTCAAAGTCACGCG+TGG 0.701035 6:-63894491 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAAATGTTTATACATA+CGG - Chr6:63894935-63894954 None:intergenic 15.0%
!!! AATAATATTGATGATAAAAG+AGG - Chr6:63894879-63894898 None:intergenic 15.0%
!! ATTTAAAGAAACTTATATCC+GGG + Chr6:63894648-63894667 MsG0680033396.01.T01:CDS 20.0%
!! GAAATCAATTCATATTACAA+AGG + Chr6:63895234-63895253 MsG0680033396.01.T01:CDS 20.0%
!! GATTTAAAGAAACTTATATC+CGG + Chr6:63894647-63894666 MsG0680033396.01.T01:CDS 20.0%
!!! ATATGAATTGATTTCTTCAT+TGG - Chr6:63895229-63895248 None:intergenic 20.0%
!!! ATATTATTATGTGTCTGTTT+TGG + Chr6:63894891-63894910 MsG0680033396.01.T01:intron 20.0%
!!! CTGTTTTTAGTTTTATCAAT+GGG - Chr6:63893956-63893975 None:intergenic 20.0%
!!! TATGAATTGATTTCTTCATT+GGG - Chr6:63895228-63895247 None:intergenic 20.0%
!!! TCTGTTTTTAGTTTTATCAA+TGG - Chr6:63893957-63893976 None:intergenic 20.0%
! AATATCTCTTATTGTGTGTT+GGG - Chr6:63894109-63894128 None:intergenic 25.0%
! AATTGAAAGACTTTGTAGTT+TGG - Chr6:63895358-63895377 None:intergenic 25.0%
! ACAAAGTCTTTCAATTTCAA+AGG + Chr6:63895362-63895381 MsG0680033396.01.T01:CDS 25.0%
! ATAGGATTCGTAAAAATACA+AGG - Chr6:63895446-63895465 None:intergenic 25.0%
! ATTGAAAGACTTTGTAGTTT+GGG - Chr6:63895357-63895376 None:intergenic 25.0%
! GAATAATTAGTGGTTTATGT+TGG + Chr6:63895403-63895422 MsG0680033396.01.T01:intron 25.0%
! GCTTTAATCAACTTGTATAA+GGG - Chr6:63894755-63894774 None:intergenic 25.0%
! TAAATGTGATGAAACACATT+CGG - Chr6:63895545-63895564 None:intergenic 25.0%
! TTTCAATTTCAAAGGTTTGT+TGG + Chr6:63895370-63895389 MsG0680033396.01.T01:intron 25.0%
!! AAATCTAAAATCTGCTTCTA+TGG - Chr6:63895596-63895615 None:intergenic 25.0%
!! ATGAATTGATTTCTTCATTG+GGG - Chr6:63895227-63895246 None:intergenic 25.0%
!! CAATTAAGTTTTCAAACACA+GGG - Chr6:63895263-63895282 None:intergenic 25.0%
!! TAATTGAACTTCGACTATTT+TGG + Chr6:63895277-63895296 MsG0680033396.01.T01:CDS 25.0%
!! TCAATTAAGTTTTCAAACAC+AGG - Chr6:63895264-63895283 None:intergenic 25.0%
!!! AAACTATTTTAGAGAGTTGA+GGG + Chr6:63894953-63894972 MsG0680033396.01.T01:intron 25.0%
!!! TTTAGTTTTATCAATGGGAA+TGG - Chr6:63893951-63893970 None:intergenic 25.0%
AAATGTGATGAAACACATTC+GGG - Chr6:63895544-63895563 None:intergenic 30.0%
AACGTCGAATAAATGGATAT+TGG - Chr6:63894777-63894796 None:intergenic 30.0%
AAGATAACTCAGTGAACATA+TGG - Chr6:63895021-63895040 None:intergenic 30.0%
ACAAAGTCATAGATCATGTA+TGG - Chr6:63895157-63895176 None:intergenic 30.0%
ACATGATCTATGACTTTGTT+TGG + Chr6:63895158-63895177 MsG0680033396.01.T01:intron 30.0%
ACTATTCCAGTATCAATCAA+TGG + Chr6:63894417-63894436 MsG0680033396.01.T01:CDS 30.0%
ATATCTCTTATTGTGTGTTG+GGG - Chr6:63894108-63894127 None:intergenic 30.0%
CTATTCCAGTATCAATCAAT+GGG + Chr6:63894418-63894437 MsG0680033396.01.T01:CDS 30.0%
GAATATCTCTTATTGTGTGT+TGG - Chr6:63894110-63894129 None:intergenic 30.0%
GATGAACTTCTGTAAAATGT+TGG + Chr6:63894310-63894329 MsG0680033396.01.T01:CDS 30.0%
GTGAGATATTGACACAATTT+GGG - Chr6:63893917-63893936 None:intergenic 30.0%
TGCAATTTCTAACTGTAACA+GGG + Chr6:63894819-63894838 MsG0680033396.01.T01:CDS 30.0%
TGTGAGATATTGACACAATT+TGG - Chr6:63893918-63893937 None:intergenic 30.0%
TTTCCAATCTTCAATGACTT+TGG - Chr6:63895506-63895525 None:intergenic 30.0%
! AGTTTTCAAAACCTCTAACA+TGG - Chr6:63894678-63894697 None:intergenic 30.0%
! GGCTTTAATCAACTTGTATA+AGG - Chr6:63894756-63894775 None:intergenic 30.0%
! GTTTTCAAAACCTCTAACAT+GGG - Chr6:63894677-63894696 None:intergenic 30.0%
! TTTGTAGTTTGGGACAATAA+TGG - Chr6:63895347-63895366 None:intergenic 30.0%
!! AGATGAAGCGTTTTAAGTAA+AGG - Chr6:63894599-63894618 None:intergenic 30.0%
!! GAAACTATTTTAGAGAGTTG+AGG + Chr6:63894952-63894971 MsG0680033396.01.T01:intron 30.0%
!!! GTTTTGTTTTGTTTGCAGAT+GGG + Chr6:63895192-63895211 MsG0680033396.01.T01:intron 30.0%
!!! TGTTTTGTTTTGTTTGCAGA+TGG + Chr6:63895191-63895210 MsG0680033396.01.T01:intron 30.0%
!!! TTTTGTTTTGTTTGCAGATG+GGG + Chr6:63895193-63895212 MsG0680033396.01.T01:intron 30.0%
CATATGTCAAATCAAGTGTC+GGG + Chr6:63894699-63894718 MsG0680033396.01.T01:CDS 35.0%
CTACCAAAGTCATTGAAGAT+TGG + Chr6:63895500-63895519 MsG0680033396.01.T01:CDS 35.0%
CTGTCAATCAGAGACAAAAT+AGG - Chr6:63895464-63895483 None:intergenic 35.0%
GAACTACCATTCTTTCAAAG+AGG + Chr6:63894210-63894229 MsG0680033396.01.T01:CDS 35.0%
GCAATTTCTAACTGTAACAG+GGG + Chr6:63894820-63894839 MsG0680033396.01.T01:CDS 35.0%
GCATATGTCAAATCAAGTGT+CGG + Chr6:63894698-63894717 MsG0680033396.01.T01:CDS 35.0%
GTGCAATTTCTAACTGTAAC+AGG + Chr6:63894818-63894837 MsG0680033396.01.T01:CDS 35.0%
TACCATTCTTTCAAAGAGGT+GGG + Chr6:63894214-63894233 MsG0680033396.01.T01:CDS 35.0%
TCACGTCGATGAATAATTAG+TGG + Chr6:63895393-63895412 MsG0680033396.01.T01:intron 35.0%
TCATCTGAGTGATGTTTGTT+TGG + Chr6:63894613-63894632 MsG0680033396.01.T01:CDS 35.0%
TTTCTGTTGTAAAACACTCG+TGG + Chr6:63894517-63894536 MsG0680033396.01.T01:CDS 35.0%
! ATATGTCAAATCAAGTGTCG+GGG + Chr6:63894700-63894719 MsG0680033396.01.T01:CDS 35.0%
! ATTTTGTCTCTGATTGACAG+TGG + Chr6:63895464-63895483 MsG0680033396.01.T01:intron 35.0%
! TGTTTGTTTGGTTGATATCG+AGG + Chr6:63894625-63894644 MsG0680033396.01.T01:CDS 35.0%
! TTGATGACTGCATTCATGAT+TGG + Chr6:63895301-63895320 MsG0680033396.01.T01:CDS 35.0%
! TTTGACTTAGTATGTCGTCT+TGG - Chr6:63894157-63894176 None:intergenic 35.0%
!! GGAGTAGAATTTTGAGGAAT+TGG - Chr6:63893984-63894003 None:intergenic 35.0%
ACACATTCGGGAACTGTATA+TGG - Chr6:63895532-63895551 None:intergenic 40.0%
AGTATGGAAGCGATCTATTG+AGG - Chr6:63894040-63894059 None:intergenic 40.0%
CACATTCGGGAACTGTATAT+GGG - Chr6:63895531-63895550 None:intergenic 40.0%
CACTTCAACGATATCCAAAG+TGG + Chr6:63894266-63894285 MsG0680033396.01.T01:CDS 40.0%
CACTTTGGATATCGTTGAAG+TGG - Chr6:63894268-63894287 None:intergenic 40.0%
CGATGACTACAATGAAGAGT+GGG - Chr6:63894005-63894024 None:intergenic 40.0%
CTACCATTCTTTCAAAGAGG+TGG + Chr6:63894213-63894232 MsG0680033396.01.T01:CDS 40.0%
CTGCATTCATGATTGGTATG+AGG + Chr6:63895308-63895327 MsG0680033396.01.T01:CDS 40.0%
GATGAAAGGATTTGAGTGTC+TGG - Chr6:63894367-63894386 None:intergenic 40.0%
TCGATGACTACAATGAAGAG+TGG - Chr6:63894006-63894025 None:intergenic 40.0%
! ACATTTGAAACTGCTCTGAG+CGG - Chr6:63894800-63894819 None:intergenic 40.0%
! AGAGTGGGAGTAGAATTTTG+AGG - Chr6:63893990-63894009 None:intergenic 40.0%
! GTATCGACACTTGAGATGAA+AGG - Chr6:63894381-63894400 None:intergenic 40.0%
! TTCGACCCATTGATTGATAC+TGG - Chr6:63894426-63894445 None:intergenic 40.0%
! TTGGGGATGTTTTCTTCCAT+TGG - Chr6:63894068-63894087 None:intergenic 40.0%
!! GTTCTGAAAGTGTCTCTGAT+TGG - Chr6:63894194-63894213 None:intergenic 40.0%
!! TCAAGTGTCGATACGATTTC+TGG + Chr6:63894387-63894406 MsG0680033396.01.T01:CDS 40.0%
AGGATTTGAGTGTCTGGTGT+TGG - Chr6:63894361-63894380 None:intergenic 45.0%
CTCTTATTGTGTGTTGGGGT+TGG - Chr6:63894104-63894123 None:intergenic 45.0%
GGATTTGAGTGTCTGGTGTT+GGG - Chr6:63894360-63894379 None:intergenic 45.0%
TGAGCGGAACGTCGAATAAA+TGG - Chr6:63894784-63894803 None:intergenic 45.0%
! GACCCACCTCTTTGAAAGAA+TGG - Chr6:63894219-63894238 None:intergenic 45.0%
! TATTGTGTGTTGGGGTTGGT+TGG - Chr6:63894100-63894119 None:intergenic 45.0%
AACAGCAATACGTCGACACG+TGG + Chr6:63894445-63894464 MsG0680033396.01.T01:CDS 50.0%
AACCTCTAACATGGGACACC+CGG - Chr6:63894669-63894688 None:intergenic 50.0%
AAGTGGCGTGAACGAAATCG+AGG + Chr6:63894283-63894302 MsG0680033396.01.T01:CDS 50.0%
CGATTTCGTTCACGCCACTT+TGG - Chr6:63894283-63894302 None:intergenic 50.0%
GTCTCTGATTGACAGTGGAC+AGG + Chr6:63895469-63895488 MsG0680033396.01.T01:intron 50.0%
GTTGGTTGGCGAAGAAGGTT+GGG - Chr6:63894086-63894105 None:intergenic 50.0%
TTGGTTGGCGAAGAAGGTTG+GGG - Chr6:63894085-63894104 None:intergenic 50.0%
! TCTTCCATTGGCGTCGAGTA+TGG - Chr6:63894056-63894075 None:intergenic 50.0%
!! TCAAATCAAGTGTCGGGGCT+GGG + Chr6:63894705-63894724 MsG0680033396.01.T01:CDS 50.0%
AGCAATACGTCGACACGTGG+AGG + Chr6:63894448-63894467 MsG0680033396.01.T01:CDS 55.0%
ATCCGGGTGTCCCATGTTAG+AGG + Chr6:63894664-63894683 MsG0680033396.01.T01:CDS 55.0%
GAAGACGTCAAAGTCACGCG+TGG - Chr6:63894494-63894513 None:intergenic 55.0%
GCGTGAACGAAATCGAGGCA+TGG + Chr6:63894288-63894307 MsG0680033396.01.T01:CDS 55.0%
GCTTCCATACTCGACGCCAA+TGG + Chr6:63894049-63894068 MsG0680033396.01.T01:CDS 55.0%
! GGTTGGTTGGCGAAGAAGGT+TGG - Chr6:63894087-63894106 None:intergenic 55.0%
!! CAAATCAAGTGTCGGGGCTG+GGG + Chr6:63894706-63894725 MsG0680033396.01.T01:CDS 55.0%
!! GTCAAATCAAGTGTCGGGGC+TGG + Chr6:63894704-63894723 MsG0680033396.01.T01:CDS 55.0%
!! TTGGGGTTGGTTGGCGAAGA+AGG - Chr6:63894091-63894110 None:intergenic 55.0%
! AGTGTCTGGTGTTGGGCGCG+TGG - Chr6:63894353-63894372 None:intergenic 65.0%
GGGGCTGGGGTTACAGCTGG+AGG + Chr6:63894719-63894738 MsG0680033396.01.T01:CDS 70.0%
GTCGGGGCTGGGGTTACAGC+TGG + Chr6:63894716-63894735 MsG0680033396.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 63893906 63895651 63893906 ID=MsG0680033396.01;Name=MsG0680033396.01
Chr6 mRNA 63893906 63895651 63893906 ID=MsG0680033396.01.T01;Parent=MsG0680033396.01;Name=MsG0680033396.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|0.66|3|0|426
Chr6 exon 63893906 63894841 63893906 ID=MsG0680033396.01.T01:exon:5215;Parent=MsG0680033396.01.T01
Chr6 exon 63895210 63895383 63895210 ID=MsG0680033396.01.T01:exon:5214;Parent=MsG0680033396.01.T01
Chr6 exon 63895484 63895651 63895484 ID=MsG0680033396.01.T01:exon:5213;Parent=MsG0680033396.01.T01
Chr6 CDS 63893906 63894841 63893906 ID=MsG0680033396.01.T01:cds;Parent=MsG0680033396.01.T01
Chr6 CDS 63895210 63895383 63895210 ID=MsG0680033396.01.T01:cds;Parent=MsG0680033396.01.T01
Chr6 CDS 63895484 63895651 63895484 ID=MsG0680033396.01.T01:cds;Parent=MsG0680033396.01.T01
Gene Sequence

>MsG0680033396.01.T01

TTGGACAACCCAAATTGTGTCAATATCTCACAATTTGAAACTCCATTCCCATTGATAAAACTAAAAACAGATAATCCAATTCCTCAAAATTCTACTCCCACTCTTCATTGTAGTCATCGATTCAGATCTGACCTCAATAGATCGCTTCCATACTCGACGCCAATGGAAGAAAACATCCCCAACCTTCTTCGCCAACCAACCCCAACACACAATAAGAGATATTCAAGAGTAGATTCTCTCAACGACTTCCAAGACGACATACTAAGTCAAATTCTCTCATTTCTTCCAATCAGAGACACTTTCAGAACTACCATTCTTTCAAAGAGGTGGGTCTCATTATGTCACTCACGTGCTGTTCACCACTTCAACGATATCCAAAGTGGCGTGAACGAAATCGAGGCATGGATGAACTTCTGTAAAATGTTGGATGCAATCTTACTCTCACCACGCGCCCAACACCAGACACTCAAATCCTTTCATCTCAAGTGTCGATACGATTTCTGGCAGTTTGACTATTCCAGTATCAATCAATGGGTCGAAACAGCAATACGTCGACACGTGGAGGATCTCTCTCTATTCTTGTTACCACGCGTGACTTTGACGTCTTCTATTTTCTGTTGTAAAACACTCGTGGTGTTGAATTTAACAAACTTACTTGTCGCAACTATGTCTGATTGTTCTGTTCATCTTCCTTTACTTAAAACGCTTCATCTGAGTGATGTTTGTTTGGTTGATATCGAGGATTTAAAGAAACTTATATCCGGGTGTCCCATGTTAGAGGTTTTGAAAACTGCATATGTCAAATCAAGTGTCGGGGCTGGGGTTACAGCTGGAGGCTACTCTAAACCCTTATACAAGTTGATTAAAGCCAATATCCATTTATTCGACGTTCCGCTCAGAGCAGTTTCAAATGTGCAATTTCTAACTGTAACAGGGATGGGGCAAAGTCTCCCCAATGAAGAAATCAATTCATATTACAAAGGCTGCCCTGTGTTTGAAAACTTAATTGAACTTCGACTATTTTGGTTTGATGACTGCATTCATGATTGGTATGAGGTAGTGCAAATGCTCCATTATTGTCCCAAACTACAAAGTCTTTCAATTTCAAAGTGGACAGGTTTATCAACTACCAAAGTCATTGAAGATTGGAAATACCCATATACAGTTCCCGAATGTGTTTCATCACATTTAACAACATGCAAAATTTTAGACTATCATGCCATAGAAGCAGATTTTAGATTTGTAACATATATTTTGCAAAATGCAAGACTTTTACAG
Protein sequence

>MsG0680033396.01.T01

LDNPNCVNISQFETPFPLIKLKTDNPIPQNSTPTLHCSHRFRSDLNRSLPYSTPMEENIPNLLRQPTPTHNKRYSRVDSLNDFQDDILSQILSFLPIRDTFRTTILSKRWVSLCHSRAVHHFNDIQSGVNEIEAWMNFCKMLDAILLSPRAQHQTLKSFHLKCRYDFWQFDYSSINQWVETAIRRHVEDLSLFLLPRVTLTSSIFCCKTLVVLNLTNLLVATMSDCSVHLPLLKTLHLSDVCLVDIEDLKKLISGCPMLEVLKTAYVKSSVGAGVTAGGYSKPLYKLIKANIHLFDVPLRAVSNVQFLTVTGMGQSLPNEEINSYYKGCPVFENLIELRLFWFDDCIHDWYEVVQMLHYCPKLQSLSISKWTGLSTTKVIEDWKYPYTVPECVSSHLTTCKILDYHAIEADFRFVTYILQNARLLQ