AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031450.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031450.01.T01 MTR_1g085120 58.974 390 145 5 3 385 92 473 4.87e-145 421
MsG0680031450.01.T01 MTR_1g085120 58.974 390 145 5 3 385 167 548 3.18e-144 421
MsG0680031450.01.T01 MTR_4g039440 57.431 397 143 9 1 385 32 414 4.64e-136 395
MsG0680031450.01.T01 MTR_6g011460 55.641 390 160 4 1 386 44 424 5.32e-132 385
MsG0680031450.01.T01 MTR_7g055943 53.418 395 167 6 2 387 39 425 8.79e-129 377
MsG0680031450.01.T01 MTR_6g022500 53.435 393 160 8 1 384 99 477 1.97e-126 373
MsG0680031450.01.T01 MTR_6g044572 49.057 424 150 10 2 389 1 394 4.15e-111 331
MsG0680031450.01.T01 MTR_6g022360 50.761 394 155 8 1 382 41 407 1.36e-110 330
MsG0680031450.01.T01 MTR_1g066830 49.614 389 179 6 2 382 7 386 2.17e-109 327
MsG0680031450.01.T01 MTR_6g044560 49.057 424 150 10 2 389 177 570 1.71e-108 330
MsG0680031450.01.T01 MTR_5g058100 49.614 389 181 8 2 385 8 386 1.71e-105 317
MsG0680031450.01.T01 MTR_1089s0010 48.969 388 181 8 2 385 7 381 7.77e-105 315
MsG0680031450.01.T01 MTR_5g073420 47.680 388 180 9 2 383 10 380 7.18e-102 307
MsG0680031450.01.T01 MTR_5g058000 49.482 386 172 10 2 382 7 374 9.07e-102 306
MsG0680031450.01.T01 MTR_6g040270 47.258 383 187 7 5 383 10 381 2.01e-100 303
MsG0680031450.01.T01 MTR_1g085120 56.902 297 114 4 3 292 179 468 3.76e-99 303
MsG0680031450.01.T01 MTR_6g022520 55.172 319 132 6 76 386 1 316 1.66e-93 283
MsG0680031450.01.T01 MTR_1g108820 41.709 398 194 11 2 381 7 384 6.47e-72 230
MsG0680031450.01.T01 MTR_7g026500 39.552 402 200 10 3 382 14 394 2.84e-71 229
MsG0680031450.01.T01 MTR_5g045170 39.098 399 206 12 1 382 12 390 3.24e-67 218
MsG0680031450.01.T01 MTR_5g007410 39.323 384 209 9 5 375 28 400 1.44e-66 218
MsG0680031450.01.T01 MTR_6g045333 37.975 395 222 10 2 382 60 445 1.38e-64 213
MsG0680031450.01.T01 MTR_5g045510 37.436 390 206 10 2 382 11 371 5.88e-64 209
MsG0680031450.01.T01 MTR_3g095600 39.628 376 142 10 2 376 3 294 2.71e-63 205
MsG0680031450.01.T01 MTR_0009s0080 37.666 377 213 8 5 369 20 386 1.55e-62 207
MsG0680031450.01.T01 MTR_5g061680 42.453 318 148 9 2 317 10 294 1.92e-62 204
MsG0680031450.01.T01 MTR_6g022390 75.000 132 32 1 1 131 3 134 1.98e-62 198
MsG0680031450.01.T01 MTR_3g071850 37.113 388 221 10 2 375 23 401 4.93e-60 209
MsG0680031450.01.T01 MTR_5g073370 35.859 396 223 10 3 385 5 382 2.65e-58 195
MsG0680031450.01.T01 MTR_2g036470 36.224 392 224 11 5 382 16 395 1.09e-54 186
MsG0680031450.01.T01 MTR_5g039490 34.673 398 202 13 2 382 19 375 4.06e-54 184
MsG0680031450.01.T01 MTR_1g108800 37.789 389 178 10 2 381 7 340 6.25e-54 182
MsG0680031450.01.T01 MTR_5g039450 32.225 391 213 10 2 380 5 355 6.10e-51 175
MsG0680031450.01.T01 MTR_3g099830 33.827 405 200 14 2 381 11 372 4.20e-50 173
MsG0680031450.01.T01 MTR_2g007400 31.235 413 231 12 1 381 10 401 4.48e-48 169
MsG0680031450.01.T01 MTR_3g107160 32.266 406 230 10 3 389 10 389 5.35e-48 168
MsG0680031450.01.T01 MTR_5g031970 33.333 387 202 11 2 380 15 353 9.53e-48 166
MsG0680031450.01.T01 MTR_5g076150 46.396 222 90 7 117 314 11 227 1.60e-46 159
MsG0680031450.01.T01 MTR_1g041245 33.990 406 215 18 2 383 10 386 4.83e-46 162
MsG0680031450.01.T01 MTR_7g056287 34.171 398 221 14 1 383 1 372 5.30e-46 162
MsG0680031450.01.T01 MTR_5g063950 31.152 382 219 8 8 380 13 359 1.48e-45 160
MsG0680031450.01.T01 MTR_1g108820 39.677 310 152 9 2 293 7 299 6.96e-45 159
MsG0680031450.01.T01 MTR_0543s0010 34.961 389 219 13 3 382 86 449 2.27e-44 160
MsG0680031450.01.T01 MTR_5g039470 33.923 339 200 9 19 345 1 327 3.48e-44 156
MsG0680031450.01.T01 MTR_7g056433 33.671 395 231 11 3 383 12 389 7.18e-44 157
MsG0680031450.01.T01 MTR_7g056277 34.336 399 219 15 1 383 257 628 1.14e-43 161
MsG0680031450.01.T01 MTR_3g107100 33.580 405 228 12 3 383 11 398 1.92e-43 156
MsG0680031450.01.T01 MTR_7g075820 34.063 411 215 17 3 381 6 392 7.82e-43 154
MsG0680031450.01.T01 MTR_2g005990 33.820 411 219 13 2 381 5 393 9.42e-43 154
MsG0680031450.01.T01 MTR_2g007450 31.765 425 224 15 2 381 15 418 1.13e-42 154
MsG0680031450.01.T01 MTR_3g108560 34.684 395 217 14 3 382 20 388 1.93e-42 153
MsG0680031450.01.T01 MTR_7g098510 34.606 393 228 13 2 383 17 391 3.51e-42 152
MsG0680031450.01.T01 MTR_5g065100 33.508 382 201 12 8 382 13 348 9.88e-42 152
MsG0680031450.01.T01 MTR_3g107120 34.772 394 227 14 3 380 9 388 3.76e-41 150
MsG0680031450.01.T01 MTR_0492s0020 35.376 359 199 12 3 352 86 420 6.51e-41 150
MsG0680031450.01.T01 MTR_7g115270 32.426 404 231 13 3 380 12 399 9.25e-41 149
MsG0680031450.01.T01 MTR_7g007080 31.566 396 232 10 3 381 4 377 1.92e-40 148
MsG0680031450.01.T01 MTR_3g036250 32.487 394 217 14 2 380 4 363 3.40e-40 146
MsG0680031450.01.T01 MTR_7g033990 29.684 411 249 13 2 397 10 395 5.81e-40 147
MsG0680031450.01.T01 MTR_2g008310 31.738 397 230 13 2 383 1 371 3.67e-39 144
MsG0680031450.01.T01 MTR_5g058350 43.781 201 74 3 2 200 7 170 4.53e-39 138
MsG0680031450.01.T01 MTR_5g073340 34.036 332 166 11 2 318 7 300 5.14e-39 142
MsG0680031450.01.T01 MTR_3g095630 45.455 187 98 3 198 384 3 185 9.59e-39 138
MsG0680031450.01.T01 MTR_3g095640 51.190 168 62 6 2 158 17 175 1.32e-38 137
MsG0680031450.01.T01 MTR_2g008320 31.500 400 233 12 2 383 51 427 1.56e-38 144
MsG0680031450.01.T01 MTR_7g088260 33.005 406 213 17 3 383 91 462 1.72e-38 144
MsG0680031450.01.T01 MTR_1g053025 31.281 406 232 14 2 380 1 386 1.95e-38 142
MsG0680031450.01.T01 MTR_3g108150 32.323 396 230 14 3 382 13 386 1.98e-38 142
MsG0680031450.01.T01 MTR_7g032380 31.726 394 210 15 2 383 10 356 4.32e-38 140
MsG0680031450.01.T01 MTR_7g033915 30.052 386 234 12 2 382 10 364 5.20e-38 140
MsG0680031450.01.T01 MTR_7g098570 32.663 398 239 13 2 388 19 398 6.49e-38 143
MsG0680031450.01.T01 MTR_3g023630 33.058 363 204 12 2 349 7 345 9.10e-38 140
MsG0680031450.01.T01 MTR_5g033200 50.000 170 78 5 211 377 11 176 4.04e-37 133
MsG0680031450.01.T01 MTR_5g008920 31.043 393 242 12 2 385 11 383 4.71e-37 139
MsG0680031450.01.T01 MTR_5g054920 43.169 183 85 5 180 352 7 180 1.35e-36 132
MsG0680031450.01.T01 MTR_3g040700 32.203 354 197 11 2 341 42 366 2.09e-36 138
MsG0680031450.01.T01 MTR_5g008950 28.426 394 246 10 5 387 1 369 1.15e-35 135
MsG0680031450.01.T01 MTR_2g007360 31.051 409 206 16 2 381 11 372 1.17e-35 135
MsG0680031450.01.T01 MTR_1377s0010 52.632 133 61 2 221 353 1 131 7.34e-35 125
MsG0680031450.01.T01 MTR_7g098480 33.171 410 242 16 2 399 17 406 5.82e-34 132
MsG0680031450.01.T01 MTR_3g105060 30.946 391 231 13 2 383 13 373 7.41e-34 130
MsG0680031450.01.T01 MTR_5g083890 32.212 416 221 18 3 378 6 400 7.57e-34 132
MsG0680031450.01.T01 MTR_7g034120 37.165 261 133 11 135 384 69 309 9.85e-34 128
MsG0680031450.01.T01 MTR_7g083740 28.499 393 227 10 2 382 16 366 8.60e-33 127
MsG0680031450.01.T01 MTR_1g107385 30.488 410 234 14 3 381 32 421 1.17e-32 127
MsG0680031450.01.T01 MTR_7g056420 30.534 393 209 13 3 375 9 357 3.15e-32 129
MsG0680031450.01.T01 MTR_7g056430 30.534 393 209 13 3 375 9 357 3.52e-32 129
MsG0680031450.01.T01 MTR_7g056020 33.247 388 207 13 3 375 16 366 1.91e-31 126
MsG0680031450.01.T01 MTR_1g059860 30.605 281 150 6 104 344 38 313 1.98e-31 122
MsG0680031450.01.T01 MTR_7g032370 30.809 383 219 15 15 383 2 352 2.60e-31 122
MsG0680031450.01.T01 MTR_7g060470 30.123 405 234 17 1 375 1 386 1.12e-30 121
MsG0680031450.01.T01 MTR_7g034115 30.518 367 219 12 1 352 9 354 3.53e-30 120
MsG0680031450.01.T01 MTR_7g007340 30.769 390 202 14 2 375 12 349 4.58e-30 119
MsG0680031450.01.T01 MTR_3g082890 30.508 413 230 15 3 383 97 484 8.66e-30 120
MsG0680031450.01.T01 MTR_7g114710 29.426 401 216 14 2 383 12 364 1.49e-29 117
MsG0680031450.01.T01 MTR_4g098590 30.458 371 215 13 5 349 1 354 5.39e-29 116
MsG0680031450.01.T01 MTR_3g108560 34.967 306 161 12 3 295 20 300 9.00e-29 114
MsG0680031450.01.T01 MTR_2g007500 30.471 361 180 12 2 329 13 335 9.87e-29 115
MsG0680031450.01.T01 MTR_3g467400 29.756 410 218 12 1 383 1 367 1.09e-28 115
MsG0680031450.01.T01 MTR_7g022105 29.825 399 242 13 2 384 48 424 5.41e-26 108
MsG0680031450.01.T01 MTR_3g082890 28.508 449 229 15 3 383 17 441 7.56e-26 108
MsG0680031450.01.T01 MTR_3g026920 27.543 403 252 9 1 380 17 402 2.59e-25 107
MsG0680031450.01.T01 MTR_8g070950 28.082 438 240 18 3 383 15 434 2.86e-25 107
MsG0680031450.01.T01 MTR_3g087260 32.824 262 163 6 128 382 201 456 3.42e-25 107
MsG0680031450.01.T01 MTR_3g087260 34.211 228 109 6 3 220 12 208 1.67e-18 87.4
MsG0680031450.01.T01 MTR_6g033095 35.616 219 84 3 140 358 32 193 4.17e-25 101
MsG0680031450.01.T01 MTR_6g022410 60.494 81 31 1 303 383 28 107 5.00e-25 99.0
MsG0680031450.01.T01 MTR_4g080610 27.525 396 216 11 5 382 14 356 5.06e-25 105
MsG0680031450.01.T01 MTR_5g012840 30.523 344 159 15 27 354 13 292 6.79e-25 104
MsG0680031450.01.T01 MTR_7g021990 30.208 384 228 14 2 366 47 409 1.03e-24 105
MsG0680031450.01.T01 MTR_3g109982 33.445 299 184 8 86 375 176 468 1.06e-24 107
MsG0680031450.01.T01 MTR_3g109982 39.698 199 90 7 3 191 13 191 2.30e-19 90.9
MsG0680031450.01.T01 MTR_7g021950 30.208 384 228 14 2 366 47 409 2.98e-24 104
MsG0680031450.01.T01 MTR_7g034110 29.532 342 180 11 2 333 10 300 3.98e-24 102
MsG0680031450.01.T01 MTR_5g061410 30.952 294 160 8 8 293 10 268 4.39e-24 100
MsG0680031450.01.T01 MTR_7g075800 28.643 398 214 16 3 345 9 391 5.35e-24 104
MsG0680031450.01.T01 MTR_8g062310 27.378 431 246 18 2 387 24 432 9.69e-24 102
MsG0680031450.01.T01 MTR_7g007370 30.749 387 182 14 2 375 16 329 1.94e-23 100
MsG0680031450.01.T01 MTR_3g071790 33.696 184 110 4 168 341 19 200 3.17e-23 96.7
MsG0680031450.01.T01 MTR_8g467800 27.373 453 246 18 3 387 20 457 5.10e-23 100
MsG0680031450.01.T01 MTR_8g077460 27.228 404 233 14 3 383 10 375 1.36e-22 98.6
MsG0680031450.01.T01 MTR_5g024060 44.355 124 64 2 253 375 81 200 1.61e-22 96.3
MsG0680031450.01.T01 MTR_5g013500 26.316 342 211 12 64 383 43 365 1.03e-21 95.9
MsG0680031450.01.T01 MTR_7g056447 38.624 189 100 6 3 187 9 185 2.32e-21 93.6
MsG0680031450.01.T01 MTR_4g032730 26.767 467 242 20 2 382 14 466 4.48e-21 95.1
MsG0680031450.01.T01 MTR_8g014160 29.167 408 239 15 3 383 41 425 1.25e-20 93.6
MsG0680031450.01.T01 MTR_8g058970 26.809 470 246 20 2 383 18 477 6.54e-20 91.7
MsG0680031450.01.T01 MTR_8g085430 29.121 364 165 14 2 349 10 296 8.93e-20 89.7
MsG0680031450.01.T01 MTR_8g062010 26.351 444 242 18 3 383 9 430 1.35e-19 90.5
MsG0680031450.01.T01 MTR_3g110010 39.901 203 84 8 3 191 13 191 4.21e-19 90.1
MsG0680031450.01.T01 MTR_0571s0010 50.575 87 35 2 3 89 32 110 1.39e-18 81.3
MsG0680031450.01.T01 MTR_5g080710 27.880 434 234 14 2 375 32 446 1.56e-18 87.4
MsG0680031450.01.T01 MTR_8g469020 26.374 455 251 22 3 383 7 451 2.92e-18 86.7
MsG0680031450.01.T01 MTR_8g062080 25.055 451 250 17 3 388 23 450 3.74e-18 86.3
MsG0680031450.01.T01 MTR_8g467800 29.667 300 183 10 3 290 20 303 1.03e-17 84.0
MsG0680031450.01.T01 MTR_4g056040 30.928 291 158 14 3 260 9 289 1.50e-17 84.7
MsG0680031450.01.T01 MTR_4g055990 25.926 459 237 19 3 360 9 465 2.39e-17 84.0
MsG0680031450.01.T01 MTR_4g055990 26.362 459 235 20 3 360 9 465 2.65e-17 84.0
MsG0680031450.01.T01 MTR_2g007550 26.562 384 213 12 2 380 13 332 3.03e-17 82.8
MsG0680031450.01.T01 MTR_2g007090 30.992 242 118 9 155 382 87 293 3.05e-17 82.0
MsG0680031450.01.T01 MTR_2g083840 24.838 463 240 18 3 383 21 457 6.28e-17 82.8
MsG0680031450.01.T01 MTR_6g029350 30.317 221 112 9 180 383 3 198 7.69e-16 77.0
MsG0680031450.01.T01 MTR_8g468760 27.083 432 243 23 2 382 8 418 1.88e-15 77.8
MsG0680031450.01.T01 MTR_4g056030 34.171 199 107 9 3 190 9 194 4.30e-15 77.0
MsG0680031450.01.T01 MTR_8g467790 30.043 233 131 8 2 223 147 358 1.42e-14 75.5
MsG0680031450.01.T01 MTR_4g134150 31.081 222 128 10 3 218 14 216 2.30e-14 72.4
MsG0680031450.01.T01 MTR_4g093690 32.000 200 105 8 3 188 18 200 2.52e-14 73.2
MsG0680031450.01.T01 MTR_2g020180 35.556 135 71 5 253 383 93 215 4.74e-14 71.2
MsG0680031450.01.T01 MTR_3g114200 37.008 127 69 3 3 129 19 134 6.46e-14 69.3
MsG0680031450.01.T01 MTR_4g050250 31.739 230 132 10 3 209 21 248 1.01e-13 72.8
MsG0680031450.01.T01 MTR_4g056020 34.343 198 106 7 3 189 9 193 1.19e-13 72.8
MsG0680031450.01.T01 MTR_8g468840 24.494 445 251 18 3 376 14 444 2.53e-13 71.6
MsG0680031450.01.T01 MTR_7g056280 31.222 221 126 8 180 385 368 577 2.66e-13 72.0
MsG0680031450.01.T01 MTR_7g056280 33.871 186 97 8 5 178 8 179 3.18e-12 68.6
MsG0680031450.01.T01 MTR_7g034090 40.000 120 61 4 272 388 206 317 4.00e-13 70.9
MsG0680031450.01.T01 MTR_1g038710 32.683 205 110 7 3 192 19 210 4.00e-13 70.9
MsG0680031450.01.T01 MTR_7g098590 52.632 76 26 2 2 77 17 82 8.52e-13 65.5
MsG0680031450.01.T01 MTR_8g468810 24.889 450 258 17 3 383 25 463 1.32e-12 69.3
MsG0680031450.01.T01 MTR_8g014290 34.586 133 70 4 3 124 10 136 1.91e-12 65.5
MsG0680031450.01.T01 MTR_7g033470 54.688 64 29 0 2 65 13 76 2.45e-12 64.7
MsG0680031450.01.T01 MTR_7g033945 32.184 174 96 6 2 165 10 171 2.84e-12 65.5
MsG0680031450.01.T01 MTR_8g062270 33.168 202 115 7 2 189 15 210 3.05e-12 68.2
MsG0680031450.01.T01 MTR_6g061720 51.429 70 28 2 8 77 13 76 4.70e-12 61.6
MsG0680031450.01.T01 MTR_3g048290 31.556 225 138 7 1 217 21 237 4.73e-12 67.8
MsG0680031450.01.T01 MTR_3g115430 29.412 119 78 3 260 373 1 118 4.86e-12 63.2
MsG0680031450.01.T01 MTR_5g073400 38.095 105 62 2 105 207 25 128 1.06e-11 62.8
MsG0680031450.01.T01 MTR_2g100590 29.442 197 125 6 2 189 41 232 2.66e-11 65.5
MsG0680031450.01.T01 MTR_2g100590 29.293 198 126 6 2 190 41 233 3.89e-11 64.7
MsG0680031450.01.T01 MTR_2g100590 29.293 198 126 6 2 190 41 233 4.60e-11 64.7
MsG0680031450.01.T01 MTR_3g107940 32.632 190 102 9 194 377 38 207 5.09e-11 63.9
MsG0680031450.01.T01 MTR_7g033940 36.800 125 66 4 1 125 92 203 6.49e-11 62.4
MsG0680031450.01.T01 MTR_3g106960 30.151 199 120 8 186 375 2 190 6.59e-11 62.4
MsG0680031450.01.T01 MTR_5g045700 59.091 44 18 0 5 48 15 58 7.49e-11 57.8
MsG0680031450.01.T01 MTR_7g081290 33.813 139 77 7 253 383 125 256 8.03e-11 62.4
MsG0680031450.01.T01 MTR_2g020170 33.594 128 74 4 3 129 22 139 8.38e-11 60.1
MsG0680031450.01.T01 MTR_1g090900 28.571 182 105 5 3 175 11 176 9.91e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031450.01.T01 AT5G56420 28.018 439 236 15 3 383 6 422 3.64e-26 109
MsG0680031450.01.T01 AT5G56420 28.018 439 236 15 3 383 6 422 3.64e-26 109
MsG0680031450.01.T01 AT5G56420 28.018 439 236 15 3 383 6 422 3.64e-26 109
MsG0680031450.01.T01 AT4G00160 28.475 446 243 17 3 387 16 446 4.49e-25 106
MsG0680031450.01.T01 AT4G26340 28.507 442 233 19 2 383 1 419 7.43e-25 105
MsG0680031450.01.T01 AT5G38590 28.741 421 235 10 2 372 1 406 4.05e-24 103
MsG0680031450.01.T01 AT4G26350 24.779 452 246 15 2 383 1 428 1.01e-23 102
MsG0680031450.01.T01 AT4G10400 28.671 429 237 16 2 382 1 408 4.81e-21 94.7
MsG0680031450.01.T01 AT4G10400 28.671 429 237 16 2 382 1 408 4.81e-21 94.7
MsG0680031450.01.T01 AT4G10400 28.671 429 237 16 2 382 1 408 4.81e-21 94.7
MsG0680031450.01.T01 AT3G58880 36.652 221 125 7 1 213 1 214 5.07e-21 95.1
MsG0680031450.01.T01 AT5G56440 26.535 456 233 18 2 382 1 429 2.45e-20 92.8
MsG0680031450.01.T01 AT5G38565 27.551 392 219 13 2 381 1 339 2.93e-20 91.7
MsG0680031450.01.T01 AT3G50710 25.909 440 249 12 2 380 1 424 7.97e-20 91.3
MsG0680031450.01.T01 AT5G41840 34.783 207 105 9 3 189 14 210 1.38e-19 91.3
MsG0680031450.01.T01 AT3G59190 35.610 205 99 9 3 189 12 201 1.63e-19 89.7
MsG0680031450.01.T01 AT3G52680 26.452 465 243 18 3 397 21 456 2.04e-19 90.1
MsG0680031450.01.T01 AT3G59190 35.610 205 99 9 3 189 12 201 2.45e-19 90.1
MsG0680031450.01.T01 AT4G13965 25.641 429 241 14 2 371 9 418 1.63e-18 87.4
MsG0680031450.01.T01 AT5G56380 26.009 446 257 17 2 382 1 438 2.43e-18 87.0
MsG0680031450.01.T01 AT5G56380 26.009 446 257 17 2 382 1 438 2.43e-18 87.0
MsG0680031450.01.T01 AT3G49030 26.471 442 241 17 3 382 21 440 7.04e-18 85.5
MsG0680031450.01.T01 AT3G59200 35.233 193 113 7 3 189 7 193 8.68e-18 84.7
MsG0680031450.01.T01 AT1G55030 26.434 401 217 14 1 345 17 395 1.02e-17 85.1
MsG0680031450.01.T01 AT1G55030 26.434 401 217 14 1 345 7 385 1.08e-17 84.7
MsG0680031450.01.T01 AT5G56370 26.818 440 243 15 2 382 1 420 2.11e-17 84.0
MsG0680031450.01.T01 AT5G56370 26.818 440 243 15 2 382 1 420 2.11e-17 84.0
MsG0680031450.01.T01 AT3G59200 35.233 193 113 7 3 189 7 193 3.13e-17 84.0
MsG0680031450.01.T01 AT3G59000 36.111 180 98 6 2 170 1 174 4.18e-17 83.6
MsG0680031450.01.T01 AT3G51530 25.435 460 232 18 3 385 30 455 5.69e-17 82.8
MsG0680031450.01.T01 AT4G14103 34.518 197 107 7 3 189 8 192 1.29e-16 81.6
MsG0680031450.01.T01 AT5G38590 28.739 341 173 14 2 329 1 284 1.30e-16 80.1
MsG0680031450.01.T01 AT4G14103 34.518 197 107 7 3 189 8 192 1.34e-16 81.3
MsG0680031450.01.T01 AT4G14103 34.518 197 107 7 3 189 8 192 1.34e-16 81.3
MsG0680031450.01.T01 AT5G56400 28.182 440 242 20 2 383 32 455 1.45e-16 81.6
MsG0680031450.01.T01 AT3G58860 25.721 451 238 18 2 371 6 440 3.10e-16 80.5
MsG0680031450.01.T01 AT3G44080 26.632 383 236 15 8 368 12 371 3.15e-16 80.1
MsG0680031450.01.T01 AT2G42720 25.806 465 241 19 2 384 1 443 4.65e-16 80.1
MsG0680031450.01.T01 AT5G41830 34.483 203 110 8 3 189 13 208 6.27e-16 79.7
MsG0680031450.01.T01 AT4G00320 34.000 200 115 6 3 189 13 208 6.57e-16 79.7
MsG0680031450.01.T01 AT2G04230 25.173 433 225 17 3 362 13 419 7.34e-16 79.3
MsG0680031450.01.T01 AT5G25860 25.587 426 221 18 3 351 12 418 9.38e-16 79.0
MsG0680031450.01.T01 AT1G58310 33.333 249 138 10 3 229 8 250 1.44e-15 79.0
MsG0680031450.01.T01 AT5G60610 27.778 324 180 11 2 309 1 286 2.29e-15 77.4
MsG0680031450.01.T01 AT5G60610 27.778 324 180 11 2 309 1 286 2.29e-15 77.4
MsG0680031450.01.T01 AT4G15060 33.333 198 115 5 2 192 25 212 2.39e-15 77.8
MsG0680031450.01.T01 AT5G38386 25.231 432 210 15 2 369 1 383 2.40e-15 77.8
MsG0680031450.01.T01 AT5G38386 25.231 432 210 15 2 369 1 383 2.40e-15 77.8
MsG0680031450.01.T01 AT5G53840 23.690 439 255 13 3 380 18 437 3.89e-15 77.0
MsG0680031450.01.T01 AT4G15060 35.354 198 111 6 2 192 171 358 4.22e-15 77.4
MsG0680031450.01.T01 AT2G42730 23.077 455 268 15 3 383 5 451 5.28e-15 77.0
MsG0680031450.01.T01 AT5G22670 32.474 194 111 6 3 191 11 189 6.33e-15 76.6
MsG0680031450.01.T01 AT5G62970 25.416 421 242 10 2 352 1 419 7.27e-15 76.3
MsG0680031450.01.T01 AT3G44060 25.397 441 231 18 8 375 4 419 8.51e-15 76.3
MsG0680031450.01.T01 AT3G26922 34.314 204 108 8 3 199 14 198 8.68e-15 75.1
MsG0680031450.01.T01 AT3G26922 34.314 204 108 8 3 199 14 198 8.68e-15 75.1
MsG0680031450.01.T01 AT4G13960 31.760 233 139 9 2 225 1 222 1.08e-14 75.9
MsG0680031450.01.T01 AT4G13960 31.760 233 139 9 2 225 1 222 1.08e-14 75.9
MsG0680031450.01.T01 AT3G59150 31.481 216 139 7 3 212 13 225 1.34e-14 75.9
MsG0680031450.01.T01 AT3G58940 25.059 427 226 17 2 354 1 407 1.36e-14 75.9
MsG0680031450.01.T01 AT3G58940 25.059 427 226 17 2 354 1 407 1.36e-14 75.9
MsG0680031450.01.T01 AT3G42770 25.576 434 237 20 8 375 4 417 1.70e-14 75.5
MsG0680031450.01.T01 AT2G26860 26.988 415 217 16 2 349 1 396 2.42e-14 74.7
MsG0680031450.01.T01 AT2G26860 26.988 415 217 16 2 349 1 396 2.42e-14 74.7
MsG0680031450.01.T01 AT4G14096 34.197 193 111 8 3 189 8 190 2.49e-14 74.7
MsG0680031450.01.T01 AT4G14096 34.197 193 111 8 3 189 8 190 2.49e-14 74.7
MsG0680031450.01.T01 AT3G58930 29.661 236 126 10 2 213 1 220 2.90e-14 74.7
MsG0680031450.01.T01 AT3G58930 29.661 236 126 10 2 213 1 220 2.90e-14 74.7
MsG0680031450.01.T01 AT3G58930 29.661 236 126 10 2 213 1 220 2.90e-14 74.7
MsG0680031450.01.T01 AT1G52650 32.000 225 126 6 2 213 1 211 3.01e-14 74.7
MsG0680031450.01.T01 AT5G38392 32.227 211 115 9 2 195 1 200 3.18e-14 72.0
MsG0680031450.01.T01 AT3G59240 31.674 221 132 9 3 213 8 219 3.55e-14 74.3
MsG0680031450.01.T01 AT4G00315 31.980 197 120 4 2 192 1 189 4.45e-14 73.9
MsG0680031450.01.T01 AT5G22610 25.814 430 253 18 3 380 18 433 4.56e-14 73.9
MsG0680031450.01.T01 AT5G56690 31.250 208 119 6 5 203 4 196 4.81e-14 73.6
MsG0680031450.01.T01 AT3G58900 32.877 219 133 7 2 213 1 212 5.58e-14 72.8
MsG0680031450.01.T01 AT3G58900 32.877 219 133 7 2 213 1 212 6.24e-14 72.8
MsG0680031450.01.T01 AT3G58900 32.877 219 133 7 2 213 1 212 6.24e-14 72.8
MsG0680031450.01.T01 AT5G53635 30.942 223 130 8 5 221 2 206 6.70e-14 73.2
MsG0680031450.01.T01 AT5G44940 25.750 400 245 16 3 380 5 374 6.89e-14 73.2
MsG0680031450.01.T01 AT3G49150 30.909 220 132 9 3 212 16 225 7.46e-14 73.6
MsG0680031450.01.T01 AT3G49030 24.700 417 254 11 3 382 21 414 9.83e-14 72.8
MsG0680031450.01.T01 AT5G41630 33.981 206 105 8 3 189 12 205 1.05e-13 72.8
MsG0680031450.01.T01 AT4G27050 33.495 206 110 8 3 189 4 201 1.14e-13 72.8
MsG0680031450.01.T01 AT4G27050 33.495 206 110 8 3 189 4 201 1.14e-13 72.8
MsG0680031450.01.T01 AT4G27050 33.495 206 110 8 3 189 4 201 1.14e-13 72.8
MsG0680031450.01.T01 AT4G27050 33.495 206 110 8 3 189 4 201 1.14e-13 72.8
MsG0680031450.01.T01 AT4G27050 33.495 206 110 8 3 189 4 201 1.14e-13 72.8
MsG0680031450.01.T01 AT5G22700 34.375 192 106 6 3 189 6 182 1.38e-13 72.4
MsG0680031450.01.T01 AT5G22700 34.375 192 106 6 3 189 6 182 1.38e-13 72.4
MsG0680031450.01.T01 AT5G22700 34.375 192 106 6 3 189 6 182 1.38e-13 72.4
MsG0680031450.01.T01 AT5G22700 34.375 192 106 6 3 189 6 182 1.38e-13 72.4
MsG0680031450.01.T01 AT4G09920 32.323 198 108 5 2 189 1 182 1.51e-13 71.2
MsG0680031450.01.T01 AT4G09920 32.323 198 108 5 2 189 1 182 1.51e-13 71.2
MsG0680031450.01.T01 AT4G09920 32.323 198 108 5 2 189 1 182 1.51e-13 71.2
MsG0680031450.01.T01 AT5G22700 34.375 192 106 6 3 189 43 219 1.59e-13 72.4
MsG0680031450.01.T01 AT5G22700 34.375 192 106 6 3 189 43 219 1.74e-13 72.4
MsG0680031450.01.T01 AT5G56410 33.641 217 121 7 2 202 1 210 1.78e-13 72.4
MsG0680031450.01.T01 AT3G58900 32.727 220 134 7 2 214 1 213 1.89e-13 72.0
MsG0680031450.01.T01 AT3G60040 25.000 448 256 14 3 383 230 664 2.06e-13 72.4
MsG0680031450.01.T01 AT3G60040 25.000 448 256 14 3 383 232 666 2.27e-13 72.4
MsG0680031450.01.T01 AT3G59160 33.803 213 111 8 3 189 13 221 2.30e-13 72.0
MsG0680031450.01.T01 AT4G09920 32.323 198 108 5 2 189 1 182 2.39e-13 70.9
MsG0680031450.01.T01 AT4G09920 32.323 198 108 5 2 189 1 182 2.39e-13 70.9
MsG0680031450.01.T01 AT3G60040 25.000 448 256 14 3 383 13 447 2.48e-13 72.0
MsG0680031450.01.T01 AT3G03040 28.017 232 152 7 2 224 1 226 2.71e-13 71.6
MsG0680031450.01.T01 AT1G16930 25.541 462 236 21 3 383 15 449 2.82e-13 71.6
MsG0680031450.01.T01 AT1G16930 25.541 462 236 21 3 383 15 449 2.82e-13 71.6
MsG0680031450.01.T01 AT1G16930 25.541 462 236 21 3 383 15 449 2.82e-13 71.6
MsG0680031450.01.T01 AT3G60040 25.000 448 256 14 3 383 232 666 3.41e-13 72.0
MsG0680031450.01.T01 AT3G60040 25.000 448 256 14 3 383 233 667 3.48e-13 72.0
MsG0680031450.01.T01 AT3G52680 30.242 248 139 9 3 238 21 246 4.96e-13 70.5
MsG0680031450.01.T01 AT5G22660 33.333 192 108 8 3 189 13 189 8.19e-13 69.3
MsG0680031450.01.T01 AT5G38396 30.342 234 129 7 2 214 1 221 8.73e-13 70.1
MsG0680031450.01.T01 AT1G55660 33.166 199 117 5 1 192 51 240 1.31e-12 68.9
MsG0680031450.01.T01 AT4G13985 30.882 204 111 7 2 189 18 207 1.68e-12 69.3
MsG0680031450.01.T01 AT3G59000 36.800 125 70 4 2 123 1 119 2.09e-12 68.2
MsG0680031450.01.T01 AT1G06630 25.937 347 191 14 3 290 12 351 2.15e-12 68.2
MsG0680031450.01.T01 AT1G06630 25.937 347 191 14 3 290 12 351 2.15e-12 68.2
MsG0680031450.01.T01 AT1G55660 33.166 199 117 5 1 192 51 240 2.28e-12 68.9
MsG0680031450.01.T01 AT5G25850 28.500 200 121 5 1 195 18 200 2.55e-12 68.6
MsG0680031450.01.T01 AT5G22660 33.333 192 108 8 3 189 13 189 2.67e-12 68.6
MsG0680031450.01.T01 AT3G58820 27.013 385 227 17 2 354 1 363 3.43e-12 68.2
MsG0680031450.01.T01 AT1G06630 25.937 347 191 14 3 290 12 351 4.79e-12 67.4
MsG0680031450.01.T01 AT1G06630 25.937 347 191 14 3 290 12 351 4.79e-12 67.4
MsG0680031450.01.T01 AT1G06630 25.937 347 191 14 3 290 12 351 4.79e-12 67.4
MsG0680031450.01.T01 AT1G06630 25.937 347 191 14 3 290 12 351 4.79e-12 67.4
MsG0680031450.01.T01 AT1G06630 25.937 347 191 14 3 290 21 360 4.95e-12 67.4
MsG0680031450.01.T01 AT3G03030 33.333 153 80 6 2 143 1 142 7.35e-12 66.6
MsG0680031450.01.T01 AT1G06630 28.700 223 139 7 3 216 12 223 7.93e-12 66.2
MsG0680031450.01.T01 AT1G48400 31.278 227 127 11 3 213 10 223 9.27e-12 67.0
MsG0680031450.01.T01 AT3G03030 24.405 336 191 10 2 290 1 320 9.53e-12 67.0
MsG0680031450.01.T01 AT5G22610 29.082 196 119 5 3 189 18 202 1.06e-11 66.6
MsG0680031450.01.T01 AT1G48400 31.278 227 127 11 3 213 10 223 1.25e-11 66.6
MsG0680031450.01.T01 AT5G38390 30.342 234 133 8 2 225 1 214 1.36e-11 66.2
MsG0680031450.01.T01 AT1G06630 26.225 347 190 14 3 290 12 351 1.38e-11 66.2
MsG0680031450.01.T01 AT1G66290 31.053 190 113 5 2 188 28 202 1.40e-11 66.2
MsG0680031450.01.T01 AT1G78750 30.457 197 122 6 2 190 17 206 1.49e-11 66.2
MsG0680031450.01.T01 AT1G78750 30.457 197 122 6 2 190 17 206 1.49e-11 66.2
MsG0680031450.01.T01 AT5G53640 29.016 193 113 6 3 189 22 196 1.75e-11 63.9
MsG0680031450.01.T01 AT3G10750 24.925 333 188 11 30 346 2 288 1.86e-11 65.1
MsG0680031450.01.T01 AT3G59170 33.032 221 104 12 3 189 7 217 1.87e-11 65.9
MsG0680031450.01.T01 AT5G56370 27.164 335 178 13 2 290 1 315 3.13e-11 64.7
MsG0680031450.01.T01 AT3G56780 32.738 168 89 6 5 165 9 159 5.97e-11 64.3
MsG0680031450.01.T01 AT3G56780 32.738 168 89 6 5 165 9 159 6.86e-11 63.9
MsG0680031450.01.T01 AT1G64540 30.973 226 109 10 5 214 7 201 9.09e-11 63.9
MsG0680031450.01.T01 AT1G64540 30.973 226 109 10 5 214 7 201 9.09e-11 63.9
MsG0680031450.01.T01 AT3G56780 32.738 168 89 6 5 165 9 159 9.72e-11 63.5

Find 72 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTGACCTTATCGAAAT+TGG 0.182829 6:-20639639 MsG0680031450.01.T01:CDS
CTTAAATTCTAGTAACTAAA+TGG 0.219627 6:+20638991 None:intergenic
GCTTGTTGTTCTCAAACTTA+TGG 0.230540 6:-20639855 MsG0680031450.01.T01:CDS
CCTGTTCTCAACTTTGAATT+TGG 0.251555 6:-20640139 MsG0680031450.01.T01:CDS
TCGAACTCTTTCTATTATAA+AGG 0.277342 6:-20639411 MsG0680031450.01.T01:intron
ATGCTGAACCTGTCTATTAT+AGG 0.283111 6:-20639697 MsG0680031450.01.T01:CDS
CTAATCACTCTATTCAAGAT+TGG 0.341194 6:-20639472 MsG0680031450.01.T01:CDS
CGCGAAACAACGCCGCGTTC+AGG 0.356729 6:-20639936 MsG0680031450.01.T01:CDS
TTAAAATAGTACATGATTTG+AGG 0.381175 6:+20639235 None:intergenic
GGTTGTAGTGAAAGCGAGTT+TGG 0.384286 6:+20640201 None:intergenic
TAATCACTCTATTCAAGATT+GGG 0.385918 6:-20639471 MsG0680031450.01.T01:CDS
AGTTGGGCATTTCCATTCCT+TGG 0.391468 6:+20639284 None:intergenic
TCGTTGTTGCTACTAATAGA+AGG 0.393818 6:-20639134 MsG0680031450.01.T01:CDS
GGATAGAATCAGCGATTTAC+CGG 0.395525 6:-20640260 MsG0680031450.01.T01:CDS
GCTATTAGAAAAGTAAATAA+TGG 0.404240 6:+20639017 None:intergenic
TCATGTCCAAGGATATCTTT+AGG 0.404917 6:-20639072 MsG0680031450.01.T01:CDS
CCAAATTCAAAGTTGAGAAC+AGG 0.406621 6:+20640139 None:intergenic
GAGTTCGAAGCTTGGGAGAA+TGG 0.409366 6:+20639426 None:intergenic
CAAACCATGCATTGAAGATT+CGG 0.410161 6:+20639963 None:intergenic
AAGCGATCACAGGTCGAGAT+TGG 0.415980 6:-20639538 MsG0680031450.01.T01:CDS
CTATGCTTGCAAATTCTGAT+AGG 0.431090 6:+20639986 None:intergenic
CGCTGCAACCAATTTCGATA+AGG 0.437324 6:+20639631 None:intergenic
CGTATGAGAGATGAAAGTTA+TGG 0.443112 6:+20639877 None:intergenic
TAGTGAAAGCGAGTTTGGTT+GGG 0.443318 6:+20640206 None:intergenic
ACACATTCAATAACCGAAGT+TGG 0.458137 6:+20639267 None:intergenic
TAGAGTGATTAGAAAACAAC+AGG 0.460181 6:+20639483 None:intergenic
GCATTTCCATTCCTTGGATG+AGG 0.461780 6:+20639290 None:intergenic
CTGAACGCGGCGTTGTTTCG+CGG 0.467461 6:+20639937 None:intergenic
ATAGAAAGAGTTCGAAGCTT+GGG 0.467754 6:+20639419 None:intergenic
ATCTATAGAAGGTGTCTTTG+CGG 0.468533 6:+20640086 None:intergenic
AAAACGGCTGAATCTATAGA+AGG 0.483027 6:+20640075 None:intergenic
GTATGAGAGATGAAAGTTAT+GGG 0.484304 6:+20639878 None:intergenic
ATAAACTATGCTTAAACGTA+GGG 0.488983 6:+20639781 None:intergenic
CACATTCAATAACCGAAGTT+GGG 0.492610 6:+20639268 None:intergenic
GCAGAGTGGGGTCCACCGCT+TGG 0.493486 6:+20640171 None:intergenic
AGCGATCACAGGTCGAGATT+GGG 0.495267 6:-20639537 MsG0680031450.01.T01:CDS
TCACATCCTAAAGATATCCT+TGG 0.500361 6:+20639066 None:intergenic
ATGTGAGACAATAAATCATC+CGG 0.501407 6:+20640241 None:intergenic
CAGGGAGTGAATAGCAGAGT+GGG 0.504008 6:+20640158 None:intergenic
TTCTCAACTTTGAATTTGGT+CGG 0.504474 6:-20640135 MsG0680031450.01.T01:CDS
GGTCCACCGCTTGGAAAGAA+TGG 0.506779 6:+20640180 None:intergenic
AATAAACTATGCTTAAACGT+AGG 0.507133 6:+20639780 None:intergenic
GAAAATCAGAATGATTACAT+AGG 0.515045 6:-20639755 MsG0680031450.01.T01:CDS
CCATGTTTCCTATAATAGAC+AGG 0.524495 6:+20639689 None:intergenic
AAACTTATGGAGTTAGACAT+TGG 0.524631 6:-20639842 MsG0680031450.01.T01:CDS
ACATGAGAGTGTTCACAAAA+CGG 0.528889 6:+20640059 None:intergenic
AATTCTAGTAACTAAATGGT+TGG 0.530685 6:+20638995 None:intergenic
AATAGAAAGAGTTCGAAGCT+TGG 0.535172 6:+20639418 None:intergenic
TGCTACTAATAGAAGGCTTG+TGG 0.535524 6:-20639127 MsG0680031450.01.T01:CDS
GTAGTGAAAGCGAGTTTGGT+TGG 0.540242 6:+20640205 None:intergenic
CCTGTCTATTATAGGAAACA+TGG 0.552395 6:-20639689 MsG0680031450.01.T01:CDS
AACCAATTTCGATAAGGTCA+AGG 0.552818 6:+20639637 None:intergenic
ATACAACCTCATCCAAGGAA+TGG 0.558212 6:-20639296 MsG0680031450.01.T01:CDS
ATCACAGGTCAAGCGATCAC+AGG 0.562499 6:-20639548 MsG0680031450.01.T01:CDS
CAACCATTCTTTCCAAGCGG+TGG 0.562603 6:-20640183 MsG0680031450.01.T01:CDS
AAGAATTGTCCTCATGTCCA+AGG 0.577289 6:-20639083 MsG0680031450.01.T01:CDS
TAAAGATATCCTTGGACATG+AGG 0.580880 6:+20639074 None:intergenic
AAGTTATGGGATTCAAGATG+TGG 0.600150 6:+20639891 None:intergenic
GAAGAATACAACCTCATCCA+AGG 0.602996 6:-20639301 MsG0680031450.01.T01:CDS
GGAATGGAAATGCCCAACTT+CGG 0.604361 6:-20639280 MsG0680031450.01.T01:CDS
AAATTCTGATAGGACAGTTG+AGG 0.606793 6:+20639996 None:intergenic
AAGTTTCTACGTATAATCAC+AGG 0.611293 6:-20639563 MsG0680031450.01.T01:CDS
CAAATTCAAAGTTGAGAACA+GGG 0.618840 6:+20640140 None:intergenic
ATAGCCGAATCTTCAATGCA+TGG 0.621223 6:-20639967 MsG0680031450.01.T01:CDS
CTACAACCATTCTTTCCAAG+CGG 0.622319 6:-20640186 MsG0680031450.01.T01:CDS
GAGCGAGGGAAGATCAACAC+AGG 0.653875 6:+20639808 None:intergenic
AAATTCTATGAAACTAAGCA+AGG 0.655176 6:-20640109 MsG0680031450.01.T01:CDS
GTCTATTATAGGAAACATGG+TGG 0.660427 6:-20639686 MsG0680031450.01.T01:CDS
ACAGGGAGTGAATAGCAGAG+TGG 0.663155 6:+20640157 None:intergenic
TTCGAAGCTTGGGAGAATGG+CGG 0.683289 6:+20639429 None:intergenic
AGGGAGTGAATAGCAGAGTG+GGG 0.713278 6:+20640159 None:intergenic
TTAGATTAAACTCCTGAACG+CGG 0.727094 6:+20639924 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GCTATTAGAAAAGTAAATAA+TGG + Chr6:20640250-20640269 None:intergenic 20.0%
!! TTAAAATAGTACATGATTTG+AGG + Chr6:20640032-20640051 None:intergenic 20.0%
!!! TGTACTATTTTAAACTTTCA+AGG - Chr6:20640039-20640058 MsG0680031450.01.T01:CDS 20.0%
! AAATTCTATGAAACTAAGCA+AGG - Chr6:20639155-20639174 MsG0680031450.01.T01:CDS 25.0%
! AATAAACTATGCTTAAACGT+AGG + Chr6:20639487-20639506 None:intergenic 25.0%
! ATAAACTATGCTTAAACGTA+GGG + Chr6:20639486-20639505 None:intergenic 25.0%
! GAAAATCAGAATGATTACAT+AGG - Chr6:20639509-20639528 MsG0680031450.01.T01:CDS 25.0%
! TAATCACTCTATTCAAGATT+GGG - Chr6:20639793-20639812 MsG0680031450.01.T01:CDS 25.0%
! TCGAACTCTTTCTATTATAA+AGG - Chr6:20639853-20639872 MsG0680031450.01.T01:CDS 25.0%
AAACTTATGGAGTTAGACAT+TGG - Chr6:20639422-20639441 MsG0680031450.01.T01:CDS 30.0%
AAGTTTCTACGTATAATCAC+AGG - Chr6:20639701-20639720 MsG0680031450.01.T01:CDS 30.0%
ATGTGAGACAATAAATCATC+CGG + Chr6:20639026-20639045 None:intergenic 30.0%
CAAATTCAAAGTTGAGAACA+GGG + Chr6:20639127-20639146 None:intergenic 30.0%
CTAATCACTCTATTCAAGAT+TGG - Chr6:20639792-20639811 MsG0680031450.01.T01:CDS 30.0%
GTATGAGAGATGAAAGTTAT+GGG + Chr6:20639389-20639408 None:intergenic 30.0%
TAGAGTGATTAGAAAACAAC+AGG + Chr6:20639784-20639803 None:intergenic 30.0%
TTCTCAACTTTGAATTTGGT+CGG - Chr6:20639129-20639148 MsG0680031450.01.T01:CDS 30.0%
AAAACGGCTGAATCTATAGA+AGG + Chr6:20639192-20639211 None:intergenic 35.0%
AAATTCTGATAGGACAGTTG+AGG + Chr6:20639271-20639290 None:intergenic 35.0%
AACCAATTTCGATAAGGTCA+AGG + Chr6:20639630-20639649 None:intergenic 35.0%
AACCTTGACCTTATCGAAAT+TGG - Chr6:20639625-20639644 MsG0680031450.01.T01:CDS 35.0%
AAGTTATGGGATTCAAGATG+TGG + Chr6:20639376-20639395 None:intergenic 35.0%
AATAGAAAGAGTTCGAAGCT+TGG + Chr6:20639849-20639868 None:intergenic 35.0%
ACACATTCAATAACCGAAGT+TGG + Chr6:20640000-20640019 None:intergenic 35.0%
ATAGAAAGAGTTCGAAGCTT+GGG + Chr6:20639848-20639867 None:intergenic 35.0%
ATGCTGAACCTGTCTATTAT+AGG - Chr6:20639567-20639586 MsG0680031450.01.T01:CDS 35.0%
CAAACCATGCATTGAAGATT+CGG + Chr6:20639304-20639323 None:intergenic 35.0%
CACATTCAATAACCGAAGTT+GGG + Chr6:20639999-20640018 None:intergenic 35.0%
CCAAATTCAAAGTTGAGAAC+AGG + Chr6:20639128-20639147 None:intergenic 35.0%
CCATGTTTCCTATAATAGAC+AGG + Chr6:20639578-20639597 None:intergenic 35.0%
CCTGTCTATTATAGGAAACA+TGG - Chr6:20639575-20639594 MsG0680031450.01.T01:CDS 35.0%
CCTGTTCTCAACTTTGAATT+TGG - Chr6:20639125-20639144 MsG0680031450.01.T01:CDS 35.0%
CGTATGAGAGATGAAAGTTA+TGG + Chr6:20639390-20639409 None:intergenic 35.0%
CTATGCTTGCAAATTCTGAT+AGG + Chr6:20639281-20639300 None:intergenic 35.0%
GTCTATTATAGGAAACATGG+TGG - Chr6:20639578-20639597 MsG0680031450.01.T01:CDS 35.0%
TAAAGATATCCTTGGACATG+AGG + Chr6:20640193-20640212 None:intergenic 35.0%
TCACATCCTAAAGATATCCT+TGG + Chr6:20640201-20640220 None:intergenic 35.0%
TCATGTCCAAGGATATCTTT+AGG - Chr6:20640192-20640211 MsG0680031450.01.T01:CDS 35.0%
TCGTTGTTGCTACTAATAGA+AGG - Chr6:20640130-20640149 MsG0680031450.01.T01:CDS 35.0%
TTAGATTAAACTCCTGAACG+CGG + Chr6:20639343-20639362 None:intergenic 35.0%
! AGCATGCAAATTTTCTAGGT+TGG + Chr6:20639552-20639571 None:intergenic 35.0%
! AGTTGAGGAGAAAAGTTTTG+AGG + Chr6:20639256-20639275 None:intergenic 35.0%
! GCATGCAAATTTTCTAGGTT+GGG + Chr6:20639551-20639570 None:intergenic 35.0%
! GTTCAGCATGCAAATTTTCT+AGG + Chr6:20639556-20639575 None:intergenic 35.0%
!! ACATGAGAGTGTTCACAAAA+CGG + Chr6:20639208-20639227 None:intergenic 35.0%
!! ATCTATAGAAGGTGTCTTTG+CGG + Chr6:20639181-20639200 None:intergenic 35.0%
!! GCTTGTTGTTCTCAAACTTA+TGG - Chr6:20639409-20639428 MsG0680031450.01.T01:intron 35.0%
!! GTTGAGGAGAAAAGTTTTGA+GGG + Chr6:20639255-20639274 None:intergenic 35.0%
!!! AAAAGTTTTGAGGGGTTTGT+TGG + Chr6:20639246-20639265 None:intergenic 35.0%
!!! TTGAGGAGAAAAGTTTTGAG+GGG + Chr6:20639254-20639273 None:intergenic 35.0%
AAGAATTGTCCTCATGTCCA+AGG - Chr6:20640181-20640200 MsG0680031450.01.T01:CDS 40.0%
ATACAACCTCATCCAAGGAA+TGG - Chr6:20639968-20639987 MsG0680031450.01.T01:CDS 40.0%
ATAGCCGAATCTTCAATGCA+TGG - Chr6:20639297-20639316 MsG0680031450.01.T01:CDS 40.0%
CTACAACCATTCTTTCCAAG+CGG - Chr6:20639078-20639097 MsG0680031450.01.T01:CDS 40.0%
GAAGAATACAACCTCATCCA+AGG - Chr6:20639963-20639982 MsG0680031450.01.T01:CDS 40.0%
GGATAGAATCAGCGATTTAC+CGG - Chr6:20639004-20639023 MsG0680031450.01.T01:CDS 40.0%
GTTGTATTCTTCGTCTGTCA+AGG + Chr6:20639955-20639974 None:intergenic 40.0%
TAGTGAAAGCGAGTTTGGTT+GGG + Chr6:20639061-20639080 None:intergenic 40.0%
TGCTACTAATAGAAGGCTTG+TGG - Chr6:20640137-20640156 MsG0680031450.01.T01:CDS 40.0%
! GGTCAAGGTTTTCAACTCTT+TGG + Chr6:20639615-20639634 None:intergenic 40.0%
AGTTGGGCATTTCCATTCCT+TGG + Chr6:20639983-20640002 None:intergenic 45.0%
CGCTGCAACCAATTTCGATA+AGG + Chr6:20639636-20639655 None:intergenic 45.0%
GCATTTCCATTCCTTGGATG+AGG + Chr6:20639977-20639996 None:intergenic 45.0%
GGAATGGAAATGCCCAACTT+CGG - Chr6:20639984-20640003 MsG0680031450.01.T01:CDS 45.0%
GGTTGTAGTGAAAGCGAGTT+TGG + Chr6:20639066-20639085 None:intergenic 45.0%
GTAGTGAAAGCGAGTTTGGT+TGG + Chr6:20639062-20639081 None:intergenic 45.0%
!!! AAACGTAGGGTTTTGAGCGA+GGG + Chr6:20639473-20639492 None:intergenic 45.0%
!!! TAAACGTAGGGTTTTGAGCG+AGG + Chr6:20639474-20639493 None:intergenic 45.0%
AAGCGATCACAGGTCGAGAT+TGG - Chr6:20639726-20639745 MsG0680031450.01.T01:CDS 50.0%
ACAGGGAGTGAATAGCAGAG+TGG + Chr6:20639110-20639129 None:intergenic 50.0%
AGCGATCACAGGTCGAGATT+GGG - Chr6:20639727-20639746 MsG0680031450.01.T01:CDS 50.0%
AGGGAGTGAATAGCAGAGTG+GGG + Chr6:20639108-20639127 None:intergenic 50.0%
ATCACAGGTCAAGCGATCAC+AGG - Chr6:20639716-20639735 MsG0680031450.01.T01:CDS 50.0%
CAACCATTCTTTCCAAGCGG+TGG - Chr6:20639081-20639100 MsG0680031450.01.T01:CDS 50.0%
CAGGGAGTGAATAGCAGAGT+GGG + Chr6:20639109-20639128 None:intergenic 50.0%
GAGTTCGAAGCTTGGGAGAA+TGG + Chr6:20639841-20639860 None:intergenic 50.0%
TTCGAAGCTTGGGAGAATGG+CGG + Chr6:20639838-20639857 None:intergenic 50.0%
GAGCGAGGGAAGATCAACAC+AGG + Chr6:20639459-20639478 None:intergenic 55.0%
GGTCCACCGCTTGGAAAGAA+TGG + Chr6:20639087-20639106 None:intergenic 55.0%
! CTGAACGCGGCGTTGTTTCG+CGG + Chr6:20639330-20639349 None:intergenic 60.0%
CGCGAAACAACGCCGCGTTC+AGG - Chr6:20639328-20639347 MsG0680031450.01.T01:intron 65.0%
GCAGAGTGGGGTCCACCGCT+TGG + Chr6:20639096-20639115 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 20638999 20640287 20638999 ID=MsG0680031450.01;Name=MsG0680031450.01
Chr6 mRNA 20638999 20640287 20638999 ID=MsG0680031450.01.T01;Parent=MsG0680031450.01;Name=MsG0680031450.01.T01;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|400
Chr6 exon 20639412 20640287 20639412 ID=MsG0680031450.01.T01:exon:13077;Parent=MsG0680031450.01.T01
Chr6 exon 20638999 20639325 20638999 ID=MsG0680031450.01.T01:exon:13076;Parent=MsG0680031450.01.T01
Chr6 CDS 20639412 20640287 20639412 ID=MsG0680031450.01.T01:cds;Parent=MsG0680031450.01.T01
Chr6 CDS 20638999 20639325 20638999 ID=MsG0680031450.01.T01:cds;Parent=MsG0680031450.01.T01
Gene Sequence

>MsG0680031450.01.T01

ATGGTGGATAGAATCAGCGATTTACCGGATGATTTATTGTCTCACATTCTCTCTTTTCTCCCAACCAAACTCGCTTTCACTACAACCATTCTTTCCAAGCGGTGGACCCCACTCTGCTATTCACTCCCTGTTCTCAACTTTGAATTTGGTCGGAAGAAATTCTATGAAACTAAGCAAGGCCGCAAAGACACCTTCTATAGATTCAGCCGTTTTGTGAACACTCTCATGTTCTCGCATATTTCAACCAACAAACCCCTCAAAACTTTTCTCCTCAACTGTCCTATCAGAATTTGCAAGCATAGCCGAATCTTCAATGCATGGTTTGAAGCCGCGAAACAACGCCGCGTTCAGGAGTTTAATCTAACTCTGCATTTCCACATCTTGAATCCCATAACTTTCATCTCTCATACGCTTGTTGTTCTCAAACTTATGGAGTTAGACATTGGAAATGACACTTCCTGTGTTGATCTTCCCTCGCTCAAAACCCTACGTTTAAGCATAGTTTATTTTGAAAATCAGAATGATTACATAGGTTTTCTTTCTGCATGTCCCAACCTAGAAAATTTGCATGCTGAACCTGTCTATTATAGGAAACATGGTGGAAACAACACATCCAAAGAGTTGAAAACCTTGACCTTATCGAAATTGGTTGCAGCGAATATCAGTGCAATAGATGCTTTCTTTAATGTCATTAAAAATGTCAAGTTTCTACGTATAATCACAGGTCAAGCGATCACAGGTCGAGATTGGGATCAAGTGTTTTCAAACTTAATTCATATTGACCTGTTGTTTTCTAATCACTCTATTCAAGATTGGGATCATGTAGTAGAACTGCTCCGCCATTCTCCCAAGCTTCGAACTCTTTCTATTATAAAGACGAAGAATACAACCTCATCCAAGGAATGGAAATGCCCAACTTCGGTTATTGAATGTGTTTCATCTCACCTCAAATCATGTACTATTTTAAACTTTCAAGGCTCAGCAAATGATCTTCGATTTACAAAATATATTTTGAAGAATGCGAGTCACTTACAAGACATGAAAATCGTTGTTGCTACTAATAGAAGGCTTGTGGAACAAATTCAGATTATAAAAGAAGAATTGTCCTCATGTCCAAGGATATCTTTAGGATGTGAAGTTTCATTTGAATTTAAGCATAGTTCCATTATTTACTTTTCTAATAGCCAACCATTTAGTTACTAG

Protein sequence

>MsG0680031450.01.T01

MVDRISDLPDDLLSHILSFLPTKLAFTTTILSKRWTPLCYSLPVLNFEFGRKKFYETKQGRKDTFYRFSRFVNTLMFSHISTNKPLKTFLLNCPIRICKHSRIFNAWFEAAKQRRVQEFNLTLHFHILNPITFISHTLVVLKLMELDIGNDTSCVDLPSLKTLRLSIVYFENQNDYIGFLSACPNLENLHAEPVYYRKHGGNNTSKELKTLTLSKLVAANISAIDAFFNVIKNVKFLRIITGQAITGRDWDQVFSNLIHIDLLFSNHSIQDWDHVVELLRHSPKLRTLSIIKTKNTTSSKEWKCPTSVIECVSSHLKSCTILNFQGSANDLRFTKYILKNASHLQDMKIVVATNRRLVEQIQIIKEELSSCPRISLGCEVSFEFKHSSIIYFSNSQPFSY*