AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028440.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028440.01.T01 MTR_5g058100 59.137 394 140 8 1 384 1 383 1.70e-149 428
MsG0580028440.01.T01 MTR_1g066830 57.761 393 146 5 4 384 2 386 1.28e-145 418
MsG0580028440.01.T01 MTR_5g058000 59.530 383 139 6 6 384 4 374 3.34e-142 409
MsG0580028440.01.T01 MTR_5g073420 51.804 388 161 8 7 384 8 379 4.49e-120 353
MsG0580028440.01.T01 MTR_1089s0010 51.948 385 169 5 6 384 4 378 1.42e-117 347
MsG0580028440.01.T01 MTR_6g040270 50.794 378 172 3 12 383 10 379 2.67e-116 343
MsG0580028440.01.T01 MTR_6g022500 51.554 386 165 10 9 383 100 474 6.85e-109 328
MsG0580028440.01.T01 MTR_1g085120 50.769 390 166 11 10 384 92 470 2.45e-106 321
MsG0580028440.01.T01 MTR_1g085120 50.769 390 166 11 10 384 167 545 6.81e-106 322
MsG0580028440.01.T01 MTR_6g011460 49.871 387 172 10 9 384 45 420 3.77e-104 314
MsG0580028440.01.T01 MTR_6g022360 47.938 388 168 10 9 384 42 407 1.31e-100 304
MsG0580028440.01.T01 MTR_4g039440 49.239 394 167 14 9 384 33 411 1.15e-98 300
MsG0580028440.01.T01 MTR_7g055943 47.089 395 177 11 9 384 39 420 7.02e-96 293
MsG0580028440.01.T01 MTR_3g095600 45.333 375 119 9 9 379 3 295 6.49e-86 263
MsG0580028440.01.T01 MTR_7g026500 41.707 410 197 11 1 384 1 394 8.64e-85 263
MsG0580028440.01.T01 MTR_6g044572 43.373 415 168 11 9 384 1 387 3.59e-84 261
MsG0580028440.01.T01 MTR_5g061680 47.649 319 133 7 7 323 8 294 2.30e-82 254
MsG0580028440.01.T01 MTR_6g044560 42.755 421 174 11 3 384 171 563 7.41e-82 261
MsG0580028440.01.T01 MTR_6g022520 52.038 319 129 10 83 384 1 312 6.78e-79 246
MsG0580028440.01.T01 MTR_6g045333 39.340 394 213 9 9 384 60 445 8.80e-78 247
MsG0580028440.01.T01 MTR_5g007410 39.086 394 211 10 2 377 18 400 2.13e-77 246
MsG0580028440.01.T01 MTR_1g108820 41.895 401 190 16 6 383 4 384 1.25e-75 239
MsG0580028440.01.T01 MTR_1g085120 50.831 301 126 9 10 299 179 468 3.26e-74 238
MsG0580028440.01.T01 MTR_0009s0080 41.061 358 187 8 12 355 20 367 3.10e-73 234
MsG0580028440.01.T01 MTR_5g045170 38.155 401 212 11 3 384 7 390 1.31e-71 229
MsG0580028440.01.T01 MTR_3g071850 36.573 391 222 9 9 381 23 405 3.02e-65 223
MsG0580028440.01.T01 MTR_5g045510 36.616 396 204 13 4 383 6 370 9.42e-63 206
MsG0580028440.01.T01 MTR_2g036470 36.294 394 220 11 10 384 14 395 5.74e-62 204
MsG0580028440.01.T01 MTR_5g039450 37.275 389 197 12 6 382 2 355 1.61e-60 199
MsG0580028440.01.T01 MTR_5g076150 50.222 225 89 4 117 319 3 226 2.79e-59 192
MsG0580028440.01.T01 MTR_5g073370 37.468 395 205 18 10 383 5 378 1.24e-55 187
MsG0580028440.01.T01 MTR_3g095630 56.831 183 69 6 209 384 6 185 8.84e-55 179
MsG0580028440.01.T01 MTR_5g031970 33.333 387 207 8 4 382 10 353 1.97e-53 181
MsG0580028440.01.T01 MTR_5g039490 35.623 393 210 11 4 384 14 375 3.47e-53 181
MsG0580028440.01.T01 MTR_1g108800 38.363 391 174 13 6 383 4 340 1.15e-52 178
MsG0580028440.01.T01 MTR_1g041245 35.338 399 212 20 9 384 10 385 1.28e-50 174
MsG0580028440.01.T01 MTR_5g039470 37.463 339 189 9 26 352 1 328 5.81e-50 171
MsG0580028440.01.T01 MTR_1g108820 40.256 313 150 12 6 299 4 298 6.96e-50 171
MsG0580028440.01.T01 MTR_7g088260 35.115 393 215 15 10 384 91 461 1.75e-47 168
MsG0580028440.01.T01 MTR_7g056433 34.422 398 217 16 10 384 12 388 2.64e-47 166
MsG0580028440.01.T01 MTR_5g033200 53.704 162 68 2 221 376 13 173 3.68e-47 159
MsG0580028440.01.T01 MTR_7g056287 35.309 388 219 15 10 384 3 371 4.61e-47 164
MsG0580028440.01.T01 MTR_3g107100 34.074 405 221 13 8 383 9 396 5.18e-47 165
MsG0580028440.01.T01 MTR_7g056277 35.567 388 218 15 10 384 259 627 8.48e-47 169
MsG0580028440.01.T01 MTR_2g007400 33.738 412 228 13 2 383 5 401 1.26e-46 164
MsG0580028440.01.T01 MTR_5g063950 31.347 386 208 11 15 382 13 359 1.98e-46 162
MsG0580028440.01.T01 MTR_0543s0010 34.197 386 221 12 10 384 86 449 2.65e-46 164
MsG0580028440.01.T01 MTR_2g007450 31.043 422 226 12 9 383 15 418 3.68e-46 163
MsG0580028440.01.T01 MTR_3g105060 32.632 380 232 10 9 384 13 372 2.35e-45 160
MsG0580028440.01.T01 MTR_3g036250 31.877 389 219 14 10 382 5 363 4.07e-45 159
MsG0580028440.01.T01 MTR_7g032380 31.378 392 207 14 9 384 10 355 8.28e-45 158
MsG0580028440.01.T01 MTR_7g098480 34.925 398 225 15 1 384 11 388 9.17e-45 161
MsG0580028440.01.T01 MTR_3g099830 33.744 406 206 14 3 383 5 372 1.14e-44 158
MsG0580028440.01.T01 MTR_7g098510 32.832 399 234 14 1 384 11 390 1.40e-44 159
MsG0580028440.01.T01 MTR_3g107120 33.333 396 229 13 8 382 7 388 1.51e-44 159
MsG0580028440.01.T01 MTR_0492s0020 34.930 355 201 11 10 356 86 418 2.58e-44 159
MsG0580028440.01.T01 MTR_5g083890 34.913 401 210 14 10 374 6 391 3.88e-44 160
MsG0580028440.01.T01 MTR_7g075820 32.195 410 219 14 10 383 6 392 6.14e-44 157
MsG0580028440.01.T01 MTR_3g040700 31.436 369 200 13 1 348 31 367 8.91e-44 157
MsG0580028440.01.T01 MTR_7g007080 32.997 397 220 16 10 383 4 377 1.52e-43 155
MsG0580028440.01.T01 MTR_1377s0010 55.385 130 57 1 234 362 5 134 1.92e-43 148
MsG0580028440.01.T01 MTR_7g033915 32.487 394 211 14 8 384 9 364 3.23e-43 154
MsG0580028440.01.T01 MTR_2g005990 33.578 408 225 13 6 383 2 393 3.45e-43 155
MsG0580028440.01.T01 MTR_3g108150 33.333 396 221 14 10 384 13 386 3.63e-43 155
MsG0580028440.01.T01 MTR_5g058350 47.826 207 71 3 1 206 1 171 3.97e-43 148
MsG0580028440.01.T01 MTR_3g107160 31.392 395 225 13 10 382 10 380 5.80e-43 154
MsG0580028440.01.T01 MTR_5g073340 35.277 343 160 14 1 324 1 300 1.61e-40 145
MsG0580028440.01.T01 MTR_7g034115 33.075 387 220 16 9 377 10 375 1.73e-40 147
MsG0580028440.01.T01 MTR_7g098570 31.899 395 236 15 1 380 12 388 9.87e-40 147
MsG0580028440.01.T01 MTR_3g108560 33.333 393 220 15 10 384 20 388 1.59e-39 145
MsG0580028440.01.T01 MTR_7g033990 33.075 387 220 15 9 377 10 375 3.46e-39 145
MsG0580028440.01.T01 MTR_5g054920 42.211 199 94 5 183 368 2 192 9.59e-39 137
MsG0580028440.01.T01 MTR_7g115270 29.250 400 244 10 10 382 12 399 1.71e-36 137
MsG0580028440.01.T01 MTR_3g023630 30.052 386 239 10 8 382 6 371 1.96e-36 136
MsG0580028440.01.T01 MTR_7g007340 32.337 368 190 13 3 355 6 329 2.23e-36 136
MsG0580028440.01.T01 MTR_3g087260 29.425 452 235 15 10 384 12 456 2.26e-36 138
MsG0580028440.01.T01 MTR_3g095640 47.904 167 76 4 6 166 14 175 3.59e-36 130
MsG0580028440.01.T01 MTR_1g053025 30.123 405 233 17 9 382 1 386 1.66e-35 134
MsG0580028440.01.T01 MTR_7g032370 30.709 381 215 15 22 384 2 351 3.25e-35 132
MsG0580028440.01.T01 MTR_4g098590 31.016 374 218 11 12 360 1 359 8.94e-35 132
MsG0580028440.01.T01 MTR_7g083740 27.720 386 234 10 9 384 16 366 2.82e-34 130
MsG0580028440.01.T01 MTR_3g082890 30.508 413 223 16 10 384 97 483 5.43e-34 132
MsG0580028440.01.T01 MTR_7g056420 31.000 400 210 16 1 377 1 357 6.38e-34 134
MsG0580028440.01.T01 MTR_7g056430 31.000 400 210 16 1 377 1 357 8.21e-34 134
MsG0580028440.01.T01 MTR_7g060470 30.526 380 217 12 10 360 3 364 1.57e-33 129
MsG0580028440.01.T01 MTR_5g008920 30.521 403 238 16 1 384 1 380 2.34e-33 128
MsG0580028440.01.T01 MTR_5g008950 30.077 389 231 14 12 384 1 364 6.37e-33 127
MsG0580028440.01.T01 MTR_1g059860 32.188 320 176 10 82 360 5 324 1.10e-32 125
MsG0580028440.01.T01 MTR_6g022390 52.713 129 61 0 9 137 4 132 1.86e-32 119
MsG0580028440.01.T01 MTR_7g034120 33.010 309 181 12 92 384 9 307 3.77e-32 123
MsG0580028440.01.T01 MTR_1g107385 30.864 405 234 12 10 383 32 421 3.83e-32 125
MsG0580028440.01.T01 MTR_2g008320 30.617 405 235 16 2 383 44 425 5.01e-32 125
MsG0580028440.01.T01 MTR_2g007360 29.657 408 222 13 2 383 4 372 6.34e-32 124
MsG0580028440.01.T01 MTR_5g065100 29.659 381 212 11 15 384 13 348 8.18e-32 125
MsG0580028440.01.T01 MTR_2g008310 31.783 387 234 15 9 383 1 369 1.40e-31 124
MsG0580028440.01.T01 MTR_7g114710 28.288 403 211 13 9 384 12 363 2.34e-31 122
MsG0580028440.01.T01 MTR_7g007370 31.008 387 186 12 8 381 15 333 3.15e-31 121
MsG0580028440.01.T01 MTR_2g007500 29.775 356 193 12 1 330 6 330 4.25e-31 121
MsG0580028440.01.T01 MTR_3g467400 30.597 402 214 15 10 384 3 366 8.85e-31 121
MsG0580028440.01.T01 MTR_3g026920 28.571 413 226 10 10 382 19 402 3.53e-30 120
MsG0580028440.01.T01 MTR_7g056020 31.783 387 209 17 10 377 16 366 3.06e-29 119
MsG0580028440.01.T01 MTR_3g082890 28.222 450 222 17 10 384 17 440 3.76e-29 117
MsG0580028440.01.T01 MTR_7g034110 29.863 365 180 13 8 357 9 312 3.18e-28 113
MsG0580028440.01.T01 MTR_5g012840 30.259 347 167 12 28 360 7 292 1.49e-27 111
MsG0580028440.01.T01 MTR_3g071790 35.556 180 100 5 183 349 26 202 5.62e-27 106
MsG0580028440.01.T01 MTR_3g108560 34.768 302 161 13 10 299 20 297 4.18e-26 107
MsG0580028440.01.T01 MTR_4g080610 29.925 401 203 15 8 384 10 356 5.99e-25 104
MsG0580028440.01.T01 MTR_8g085430 26.703 367 185 10 9 363 10 304 7.34e-25 103
MsG0580028440.01.T01 MTR_2g007090 34.649 228 122 6 163 384 87 293 1.88e-24 102
MsG0580028440.01.T01 MTR_6g033095 35.385 195 69 3 163 356 47 185 2.78e-24 99.4
MsG0580028440.01.T01 MTR_3g109982 33.074 257 141 9 140 377 224 468 4.43e-24 104
MsG0580028440.01.T01 MTR_3g109982 33.444 302 157 11 10 298 13 283 1.07e-22 100
MsG0580028440.01.T01 MTR_7g021990 30.081 369 229 11 8 362 46 399 7.72e-24 102
MsG0580028440.01.T01 MTR_7g021950 30.081 369 229 11 8 362 46 399 1.82e-23 102
MsG0580028440.01.T01 MTR_7g056447 37.895 190 101 7 10 195 9 185 1.05e-22 97.4
MsG0580028440.01.T01 MTR_3g110010 33.444 302 157 11 10 298 13 283 1.31e-22 100
MsG0580028440.01.T01 MTR_7g022105 30.081 369 225 11 10 362 49 400 8.94e-22 96.7
MsG0580028440.01.T01 MTR_7g075800 27.295 403 218 17 10 354 9 394 1.02e-21 97.4
MsG0580028440.01.T01 MTR_5g024060 39.370 127 74 2 254 377 74 200 9.92e-21 90.9
MsG0580028440.01.T01 MTR_5g061410 28.328 293 169 9 15 300 10 268 1.27e-19 88.2
MsG0580028440.01.T01 MTR_0571s0010 51.111 90 36 1 10 99 32 113 7.36e-19 82.0
MsG0580028440.01.T01 MTR_8g467800 28.112 466 228 22 2 384 11 452 1.68e-18 87.0
MsG0580028440.01.T01 MTR_6g029350 35.377 212 105 8 187 383 2 196 2.03e-18 84.0
MsG0580028440.01.T01 MTR_4g032730 25.431 464 249 18 8 384 13 466 2.76e-17 83.6
MsG0580028440.01.T01 MTR_6g022410 47.059 85 42 1 303 384 22 106 3.07e-17 77.4
MsG0580028440.01.T01 MTR_7g033945 33.898 177 94 6 8 174 9 172 3.46e-17 79.3
MsG0580028440.01.T01 MTR_5g073400 40.650 123 67 4 90 210 4 122 6.55e-17 77.4
MsG0580028440.01.T01 MTR_5g080710 25.503 447 237 17 2 377 25 446 7.29e-17 82.4
MsG0580028440.01.T01 MTR_2g007530 25.547 411 173 14 10 382 19 334 1.40e-16 80.5
MsG0580028440.01.T01 MTR_5g044790 33.775 151 61 4 268 382 290 437 6.42e-16 79.3
MsG0580028440.01.T01 MTR_1g038710 30.392 204 117 6 7 197 16 207 1.90e-15 77.8
MsG0580028440.01.T01 MTR_3g106960 31.633 196 119 8 193 378 1 191 2.64e-15 75.1
MsG0580028440.01.T01 MTR_2g007550 30.846 201 104 7 206 382 143 332 5.49e-15 75.9
MsG0580028440.01.T01 MTR_8g467790 31.731 208 121 8 9 205 147 344 9.44e-14 72.8
MsG0580028440.01.T01 MTR_7g034090 37.037 135 73 5 258 384 181 311 1.06e-13 72.4
MsG0580028440.01.T01 MTR_7g034090 35.714 154 82 6 10 157 4 146 3.20e-12 68.2
MsG0580028440.01.T01 MTR_8g014290 31.548 168 87 5 1 149 1 159 1.06e-13 68.9
MsG0580028440.01.T01 MTR_1g013560 30.151 199 123 8 7 197 16 206 1.09e-13 72.0
MsG0580028440.01.T01 MTR_7g056280 29.756 205 124 8 187 375 367 567 2.20e-13 72.0
MsG0580028440.01.T01 MTR_4g050250 31.132 212 120 8 10 199 21 228 2.31e-13 71.6
MsG0580028440.01.T01 MTR_1g013560 30.151 199 123 8 7 197 16 206 2.43e-13 71.6
MsG0580028440.01.T01 MTR_2g047858 26.623 308 175 12 8 300 113 384 4.03e-13 71.2
MsG0580028440.01.T01 MTR_4g134150 29.500 200 116 8 10 204 14 193 4.64e-13 68.6
MsG0580028440.01.T01 MTR_8g058965 31.776 214 114 10 9 199 12 216 5.07e-13 70.5
MsG0580028440.01.T01 MTR_8g014160 25.369 406 260 16 5 384 36 424 1.37e-12 68.9
MsG0580028440.01.T01 MTR_4g055580 30.045 223 120 11 10 197 100 321 1.74e-12 69.3
MsG0580028440.01.T01 MTR_3g115430 31.496 127 74 5 268 384 1 124 2.00e-12 64.3
MsG0580028440.01.T01 MTR_1g077420 31.313 198 112 8 10 198 4 186 4.47e-12 66.2
MsG0580028440.01.T01 MTR_7g022060 28.634 227 126 5 10 224 10 212 4.97e-12 67.0
MsG0580028440.01.T01 MTR_7g021930 28.634 227 126 5 10 224 10 212 6.03e-12 66.6
MsG0580028440.01.T01 MTR_7g021970 28.634 227 126 5 10 224 10 212 6.03e-12 66.6
MsG0580028440.01.T01 MTR_2g100590 30.612 196 125 7 9 197 41 232 6.29e-12 67.4
MsG0580028440.01.T01 MTR_2g100590 30.612 196 125 7 9 197 41 232 6.55e-12 67.0
MsG0580028440.01.T01 MTR_8g467800 31.955 266 134 12 10 251 20 262 6.95e-12 66.6
MsG0580028440.01.T01 MTR_8g465650 29.108 213 118 9 7 201 9 206 8.14e-12 66.6
MsG0580028440.01.T01 MTR_2g100590 30.612 196 125 7 9 197 41 232 8.19e-12 66.6
MsG0580028440.01.T01 MTR_6g061720 48.571 70 30 2 15 84 13 76 1.47e-11 60.1
MsG0580028440.01.T01 MTR_1g013580 29.500 200 119 8 9 197 18 206 1.80e-11 65.9
MsG0580028440.01.T01 MTR_3g114200 33.553 152 83 6 8 154 17 155 3.75e-11 61.6
MsG0580028440.01.T01 MTR_5g039950 23.272 434 252 15 1 384 13 415 5.61e-11 64.3
MsG0580028440.01.T01 MTR_4g056030 30.097 206 111 9 10 200 9 196 6.44e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028440.01.T01 AT3G59200 27.097 465 243 18 7 382 4 461 1.02e-24 105
MsG0580028440.01.T01 AT5G56380 26.164 451 245 17 9 384 1 438 1.09e-24 105
MsG0580028440.01.T01 AT5G56380 26.164 451 245 17 9 384 1 438 1.09e-24 105
MsG0580028440.01.T01 AT4G26340 26.067 445 233 16 9 384 1 418 4.35e-24 103
MsG0580028440.01.T01 AT3G59200 28.493 365 178 13 10 298 7 364 4.69e-23 99.8
MsG0580028440.01.T01 AT5G56420 26.744 430 246 16 10 384 6 421 4.85e-22 97.4
MsG0580028440.01.T01 AT5G56420 26.744 430 246 16 10 384 6 421 4.85e-22 97.4
MsG0580028440.01.T01 AT5G56420 26.744 430 246 16 10 384 6 421 4.85e-22 97.4
MsG0580028440.01.T01 AT3G50710 24.429 438 253 14 9 382 1 424 3.64e-21 94.7
MsG0580028440.01.T01 AT5G56370 24.714 437 251 12 9 384 1 420 3.98e-21 94.7
MsG0580028440.01.T01 AT5G56370 24.714 437 251 12 9 384 1 420 3.98e-21 94.7
MsG0580028440.01.T01 AT5G56560 25.995 427 248 13 11 384 6 417 3.71e-20 92.0
MsG0580028440.01.T01 AT3G59190 28.982 383 170 16 2 298 4 370 3.75e-20 91.7
MsG0580028440.01.T01 AT5G41830 26.582 395 198 16 10 322 13 397 7.70e-20 91.7
MsG0580028440.01.T01 AT3G59190 28.982 383 170 16 2 298 4 370 8.26e-20 91.3
MsG0580028440.01.T01 AT5G56440 25.277 451 240 19 9 384 1 429 2.16e-19 89.7
MsG0580028440.01.T01 AT3G58940 27.062 388 203 18 9 331 1 373 2.60e-19 90.1
MsG0580028440.01.T01 AT3G58940 27.062 388 203 18 9 331 1 373 2.60e-19 90.1
MsG0580028440.01.T01 AT4G26350 24.944 445 247 16 9 384 1 427 2.64e-19 89.4
MsG0580028440.01.T01 AT1G48400 34.848 198 109 9 10 198 10 196 6.76e-19 88.6
MsG0580028440.01.T01 AT1G48400 34.848 198 109 9 10 198 10 196 6.78e-19 88.6
MsG0580028440.01.T01 AT4G00160 25.624 441 247 16 10 384 16 441 3.22e-18 86.3
MsG0580028440.01.T01 AT5G56400 26.562 448 244 16 3 384 26 454 3.95e-18 86.3
MsG0580028440.01.T01 AT5G56820 26.728 434 232 14 10 382 15 423 4.58e-18 85.9
MsG0580028440.01.T01 AT5G41840 26.065 399 182 16 5 301 9 396 5.93e-18 85.9
MsG0580028440.01.T01 AT2G04230 28.369 423 219 16 3 358 6 411 7.32e-18 85.1
MsG0580028440.01.T01 AT4G14103 33.663 202 119 8 1 197 1 192 1.11e-17 84.3
MsG0580028440.01.T01 AT4G14103 33.663 202 119 8 1 197 1 192 1.11e-17 84.3
MsG0580028440.01.T01 AT3G59160 26.209 393 189 14 2 298 5 392 1.32e-17 84.7
MsG0580028440.01.T01 AT4G00320 26.415 371 175 16 10 295 13 370 1.76e-17 84.3
MsG0580028440.01.T01 AT4G14103 33.663 202 119 8 1 197 1 192 2.01e-17 84.0
MsG0580028440.01.T01 AT3G58900 26.477 457 228 20 9 371 1 443 2.36e-17 84.0
MsG0580028440.01.T01 AT4G10400 25.517 435 238 14 9 384 1 408 2.44e-17 83.6
MsG0580028440.01.T01 AT4G10400 25.517 435 238 14 9 384 1 408 2.44e-17 83.6
MsG0580028440.01.T01 AT4G10400 25.517 435 238 14 9 384 1 408 2.44e-17 83.6
MsG0580028440.01.T01 AT3G58880 34.653 202 112 8 9 200 2 193 2.46e-17 83.6
MsG0580028440.01.T01 AT3G42770 26.852 432 233 22 15 379 4 419 2.56e-17 84.0
MsG0580028440.01.T01 AT1G32375 24.312 436 255 17 9 384 1 421 3.01e-17 83.2
MsG0580028440.01.T01 AT1G32375 24.312 436 255 17 9 384 1 421 3.01e-17 83.2
MsG0580028440.01.T01 AT5G56810 25.408 429 252 16 10 382 15 431 3.11e-17 83.2
MsG0580028440.01.T01 AT3G59170 32.143 224 111 8 6 197 3 217 3.29e-17 83.6
MsG0580028440.01.T01 AT2G42720 26.247 461 233 19 9 383 1 440 3.41e-17 83.2
MsG0580028440.01.T01 AT3G58860 27.841 352 183 15 6 297 3 343 3.81e-17 83.2
MsG0580028440.01.T01 AT3G49150 36.410 195 108 9 10 197 16 201 1.98e-16 80.9
MsG0580028440.01.T01 AT1G58310 28.010 382 170 17 10 298 8 377 2.73e-16 80.9
MsG0580028440.01.T01 AT3G59240 25.771 454 236 19 10 373 8 450 3.26e-16 80.5
MsG0580028440.01.T01 AT2G42730 24.945 457 246 17 10 382 5 448 3.31e-16 80.5
MsG0580028440.01.T01 AT5G56370 26.061 330 184 8 9 295 1 313 3.55e-16 79.3
MsG0580028440.01.T01 AT3G52680 25.951 447 236 18 10 384 21 444 7.65e-16 79.3
MsG0580028440.01.T01 AT1G16930 31.122 196 110 7 10 197 15 193 1.24e-15 78.6
MsG0580028440.01.T01 AT1G16930 31.122 196 110 7 10 197 15 193 1.24e-15 78.6
MsG0580028440.01.T01 AT1G16930 31.122 196 110 7 10 197 15 193 1.24e-15 78.6
MsG0580028440.01.T01 AT3G44080 26.854 391 243 13 15 382 12 382 1.52e-15 77.8
MsG0580028440.01.T01 AT3G58900 36.041 197 109 8 9 197 1 188 1.68e-15 77.4
MsG0580028440.01.T01 AT3G58900 36.041 197 109 8 9 197 1 188 1.68e-15 77.4
MsG0580028440.01.T01 AT3G58900 36.041 197 109 8 9 197 1 188 1.74e-15 77.0
MsG0580028440.01.T01 AT2G26860 31.000 200 113 7 9 197 1 186 2.65e-15 77.4
MsG0580028440.01.T01 AT2G26860 31.000 200 113 7 9 197 1 186 2.65e-15 77.4
MsG0580028440.01.T01 AT5G60610 26.034 411 217 17 9 356 1 387 3.71e-15 76.6
MsG0580028440.01.T01 AT5G60610 26.034 411 217 17 9 356 1 387 3.71e-15 76.6
MsG0580028440.01.T01 AT4G00315 31.633 196 117 6 9 197 1 186 4.31e-15 77.0
MsG0580028440.01.T01 AT5G38396 33.005 203 113 9 9 197 1 194 4.40e-15 77.0
MsG0580028440.01.T01 AT5G56690 30.516 213 115 8 12 211 4 196 4.62e-15 76.6
MsG0580028440.01.T01 AT1G78750 28.502 207 130 7 1 198 9 206 4.63e-15 77.0
MsG0580028440.01.T01 AT1G78750 28.502 207 130 7 1 198 9 206 4.63e-15 77.0
MsG0580028440.01.T01 AT3G59150 26.809 470 249 20 2 382 5 468 5.18e-15 76.6
MsG0580028440.01.T01 AT4G14096 34.536 194 110 10 10 197 8 190 5.93e-15 76.6
MsG0580028440.01.T01 AT4G14096 34.536 194 110 10 10 197 8 190 5.93e-15 76.6
MsG0580028440.01.T01 AT4G09920 30.653 199 121 5 9 202 1 187 7.67e-15 75.1
MsG0580028440.01.T01 AT4G09920 30.653 199 121 5 9 202 1 187 7.67e-15 75.1
MsG0580028440.01.T01 AT5G38392 31.553 206 112 8 9 197 1 194 8.47e-15 73.6
MsG0580028440.01.T01 AT1G55660 31.633 196 117 5 9 197 52 237 9.30e-15 75.5
MsG0580028440.01.T01 AT4G09920 31.156 199 120 6 9 202 1 187 1.06e-14 74.3
MsG0580028440.01.T01 AT4G09920 31.156 199 120 6 9 202 1 187 1.06e-14 74.3
MsG0580028440.01.T01 AT4G09920 31.156 199 120 6 9 202 1 187 1.06e-14 74.3
MsG0580028440.01.T01 AT1G55660 31.633 196 117 5 9 197 52 237 1.13e-14 75.9
MsG0580028440.01.T01 AT5G56560 30.435 299 177 12 11 298 6 284 1.20e-14 75.9
MsG0580028440.01.T01 AT4G13960 31.481 216 131 8 9 217 1 206 4.08e-14 73.9
MsG0580028440.01.T01 AT4G13960 31.481 216 131 8 9 217 1 206 4.08e-14 73.9
MsG0580028440.01.T01 AT1G06630 24.318 403 231 15 10 353 12 399 4.53e-14 73.6
MsG0580028440.01.T01 AT1G06630 24.318 403 231 15 10 353 12 399 4.53e-14 73.6
MsG0580028440.01.T01 AT1G06630 24.318 403 231 15 10 353 12 399 4.53e-14 73.6
MsG0580028440.01.T01 AT1G06630 24.318 403 231 15 10 353 12 399 4.53e-14 73.6
MsG0580028440.01.T01 AT5G38386 26.478 389 220 20 9 356 1 364 4.83e-14 73.6
MsG0580028440.01.T01 AT5G38386 26.478 389 220 20 9 356 1 364 4.83e-14 73.6
MsG0580028440.01.T01 AT5G38390 31.884 207 113 6 9 208 1 186 4.83e-14 73.6
MsG0580028440.01.T01 AT1G06630 24.318 403 231 15 10 353 21 408 6.12e-14 73.2
MsG0580028440.01.T01 AT3G59000 34.254 181 101 7 9 178 1 174 6.41e-14 73.6
MsG0580028440.01.T01 AT4G22280 25.866 433 230 15 9 379 1 404 6.43e-14 73.2
MsG0580028440.01.T01 AT1G06630 32.828 198 118 8 10 198 12 203 8.10e-14 72.0
MsG0580028440.01.T01 AT5G56810 31.414 191 118 5 10 197 15 195 9.59e-14 71.6
MsG0580028440.01.T01 AT1G06630 32.828 198 118 8 10 198 12 203 1.04e-13 72.0
MsG0580028440.01.T01 AT1G06630 32.828 198 118 8 10 198 12 203 1.04e-13 72.0
MsG0580028440.01.T01 AT3G60040 25.349 430 235 20 10 368 13 427 1.50e-13 72.4
MsG0580028440.01.T01 AT5G38570 27.020 396 248 15 9 384 1 375 1.73e-13 71.6
MsG0580028440.01.T01 AT3G60040 24.651 430 238 19 10 368 232 646 1.74e-13 72.4
MsG0580028440.01.T01 AT5G22660 30.928 194 111 6 10 197 13 189 1.78e-13 71.2
MsG0580028440.01.T01 AT1G06630 32.828 198 118 8 10 198 12 203 1.82e-13 72.0
MsG0580028440.01.T01 AT3G60040 25.349 430 235 20 10 368 232 646 1.95e-13 72.4
MsG0580028440.01.T01 AT3G60040 25.349 430 235 20 10 368 233 647 1.95e-13 72.4
MsG0580028440.01.T01 AT3G60040 24.651 430 238 19 10 368 230 644 1.98e-13 72.4
MsG0580028440.01.T01 AT5G44940 23.188 414 237 14 8 382 3 374 3.02e-13 70.9
MsG0580028440.01.T01 AT5G22660 30.928 194 111 6 10 197 13 189 3.12e-13 71.2
MsG0580028440.01.T01 AT3G59210 31.579 209 122 7 10 208 7 204 3.29e-13 71.2
MsG0580028440.01.T01 AT3G59210 31.579 209 122 7 10 208 7 204 3.29e-13 71.2
MsG0580028440.01.T01 AT3G59210 31.579 209 122 7 10 208 7 204 3.29e-13 71.2
MsG0580028440.01.T01 AT3G59210 31.579 209 122 7 10 208 7 204 3.29e-13 71.2
MsG0580028440.01.T01 AT3G59210 31.579 209 122 7 10 208 7 204 3.29e-13 71.2
MsG0580028440.01.T01 AT5G41630 26.720 378 177 17 10 298 12 378 3.62e-13 71.2
MsG0580028440.01.T01 AT3G58820 34.783 161 90 5 9 160 1 155 4.33e-13 70.5
MsG0580028440.01.T01 AT3G58930 26.316 228 141 8 9 219 1 218 4.95e-13 70.9
MsG0580028440.01.T01 AT3G58930 26.316 228 141 8 9 219 1 218 4.95e-13 70.9
MsG0580028440.01.T01 AT3G58930 26.316 228 141 8 9 219 1 218 4.95e-13 70.9
MsG0580028440.01.T01 AT5G25860 23.810 441 243 16 2 366 4 427 6.10e-13 70.5
MsG0580028440.01.T01 AT4G22280 32.308 195 111 6 9 197 1 180 6.12e-13 69.7
MsG0580028440.01.T01 AT3G03040 24.814 403 205 17 9 327 1 389 9.02e-13 69.7
MsG0580028440.01.T01 AT3G59230 30.693 202 118 7 10 197 12 205 9.63e-13 69.7
MsG0580028440.01.T01 AT3G58980 29.469 207 124 6 9 206 1 194 1.34e-12 69.7
MsG0580028440.01.T01 AT3G26922 30.244 205 118 10 1 197 5 192 1.64e-12 68.2
MsG0580028440.01.T01 AT3G26922 30.244 205 118 10 1 197 5 192 1.64e-12 68.2
MsG0580028440.01.T01 AT2G29930 30.570 193 113 8 10 197 12 188 1.88e-12 68.9
MsG0580028440.01.T01 AT2G29930 30.570 193 113 8 10 197 12 188 1.88e-12 68.9
MsG0580028440.01.T01 AT5G53635 31.088 193 111 8 12 197 2 179 2.78e-12 68.2
MsG0580028440.01.T01 AT5G44950 27.734 256 146 11 10 250 4 235 3.41e-12 68.2
MsG0580028440.01.T01 AT5G22720 26.316 209 135 5 4 206 17 212 4.63e-12 67.8
MsG0580028440.01.T01 AT5G44980 23.922 464 236 20 7 384 1 433 6.83e-12 67.0
MsG0580028440.01.T01 AT5G44980 23.922 464 236 20 7 384 1 433 6.83e-12 67.0
MsG0580028440.01.T01 AT5G62970 24.561 456 256 19 9 384 1 448 7.46e-12 67.0
MsG0580028440.01.T01 AT3G03030 26.336 262 144 10 9 233 1 250 8.90e-12 66.2
MsG0580028440.01.T01 AT3G03030 23.702 443 226 19 9 355 1 427 9.10e-12 66.6
MsG0580028440.01.T01 AT4G15060 29.524 210 127 6 8 209 24 220 1.01e-11 66.6
MsG0580028440.01.T01 AT4G15060 29.858 211 125 8 8 209 170 366 1.20e-11 66.6
MsG0580028440.01.T01 AT3G59000 36.508 126 70 5 9 131 1 119 1.34e-11 65.9
MsG0580028440.01.T01 AT3G58920 30.415 217 100 8 9 197 1 194 1.69e-11 65.9
MsG0580028440.01.T01 AT5G56410 29.952 207 121 9 9 197 1 201 2.45e-11 65.5
MsG0580028440.01.T01 AT1G21990 32.161 199 106 11 10 197 9 189 2.64e-11 65.5
MsG0580028440.01.T01 AT5G44980 27.830 212 108 7 7 198 1 187 2.99e-11 64.3
MsG0580028440.01.T01 AT5G44980 27.830 212 108 7 7 198 1 187 2.99e-11 64.3
MsG0580028440.01.T01 AT5G22670 27.413 259 156 9 10 256 11 249 3.23e-11 65.1
MsG0580028440.01.T01 AT3G44810 23.965 459 253 17 5 382 2 445 3.88e-11 64.7
MsG0580028440.01.T01 AT4G27050 31.401 207 120 9 7 197 1 201 4.10e-11 64.7
MsG0580028440.01.T01 AT4G27050 31.401 207 120 9 7 197 1 201 4.10e-11 64.7
MsG0580028440.01.T01 AT4G27050 31.401 207 120 9 7 197 1 201 4.10e-11 64.7
MsG0580028440.01.T01 AT4G27050 31.401 207 120 9 7 197 1 201 4.10e-11 64.7
MsG0580028440.01.T01 AT4G27050 31.401 207 120 9 7 197 1 201 4.10e-11 64.7
MsG0580028440.01.T01 AT3G52680 30.435 253 144 9 10 252 21 251 4.84e-11 64.3
MsG0580028440.01.T01 AT2G26030 28.351 194 117 6 10 196 4 182 6.15e-11 64.3
MsG0580028440.01.T01 AT2G26030 28.351 194 117 6 10 196 4 182 6.15e-11 64.3
MsG0580028440.01.T01 AT2G26030 28.351 194 117 6 10 196 4 182 6.62e-11 63.9

Find 58 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACTGCTTGTCTTAGTTAT+AGG 0.189123 5:+80530450 MsG0580028440.01.T01:CDS
ATCCGTGTTCTTGTTCAAAT+TGG 0.229880 5:+80530508 MsG0580028440.01.T01:CDS
CATTTGAAATTCGTCAGTTT+TGG 0.243077 5:+80530371 MsG0580028440.01.T01:CDS
ACACAGTCATGAGCTGAAAT+TGG 0.244414 5:-80530873 None:intergenic
CTCCTCAAATGATCAAATTA+TGG 0.261984 5:+80531022 MsG0580028440.01.T01:CDS
GAAGAGTGAAGTCCATCTTT+TGG 0.290060 5:-80529973 None:intergenic
ACTTAATTCATATTGAACTA+TGG 0.305005 5:+80530648 MsG0580028440.01.T01:CDS
TTTGTGACTCCTTTCATGAT+TGG 0.344211 5:+80530672 MsG0580028440.01.T01:CDS
TTCCATAATTTGATCATTTG+AGG 0.367168 5:-80531024 None:intergenic
TTGTGACTCCTTTCATGATT+GGG 0.367730 5:+80530673 MsG0580028440.01.T01:CDS
ATGTCAAGTTTCTACACATA+AGG 0.409641 5:+80530582 MsG0580028440.01.T01:CDS
TAGTGTTTGAGAGGTGAAAA+TGG 0.410373 5:-80530273 None:intergenic
ACTGTGTTTCTTATCACCTT+AGG 0.418778 5:+80530889 MsG0580028440.01.T01:CDS
ATCATCGGATGAACCAATAT+CGG 0.430755 5:-80530537 None:intergenic
GTATGCAAATCTTGTAGAAT+AGG 0.432659 5:-80530431 None:intergenic
AAATTGGTTAGAGCCGATAT+TGG 0.451834 5:+80530524 MsG0580028440.01.T01:CDS
CACAGTCATGAGCTGAAATT+GGG 0.452071 5:-80530872 None:intergenic
AACTGACGAATTTCAAATGT+AGG 0.458703 5:-80530367 None:intergenic
TACCAGCGTATCCAAGGATT+GGG 0.465109 5:+80530845 MsG0580028440.01.T01:CDS
CAACCCTCCTTTCCAAAAGA+TGG 0.465556 5:+80529961 MsG0580028440.01.T01:CDS
ATCGTAAAAGCTTCCATGCA+TGG 0.471604 5:+80530180 MsG0580028440.01.T01:CDS
AATTGGGCATTCCCAATCCT+TGG 0.476413 5:-80530856 None:intergenic
TTACATCTCGGAGACATCCT+TGG 0.479682 5:-80531062 None:intergenic
ACATTAGCAATGGCAGTAAA+CGG 0.484712 5:-80530563 None:intergenic
ATGGGTTGGTTGATGGCATG+TGG 0.499291 5:-80530113 None:intergenic
TGTCAAGTTTCTACACATAA+GGG 0.501296 5:+80530583 MsG0580028440.01.T01:CDS
ATGTGAGAAAGTAGTTCGTT+AGG 0.501951 5:-80529903 None:intergenic
TTTGACATTACGTTGTTTCG+CGG 0.501962 5:-80530210 None:intergenic
ATACCAGCGTATCCAAGGAT+TGG 0.508635 5:+80530844 MsG0580028440.01.T01:CDS
GACTCCTTTCATGATTGGGT+TGG 0.515569 5:+80530677 MsG0580028440.01.T01:CDS
ATTGAAGGGTCTTCTTTCAA+AGG 0.516531 5:+80530608 MsG0580028440.01.T01:CDS
ACTGACGAATTTCAAATGTA+GGG 0.522725 5:-80530366 None:intergenic
CAAATCTTGTAGAATAGGAC+AGG 0.527868 5:-80530426 None:intergenic
TCGTAAAAGCTTCCATGCAT+GGG 0.529723 5:+80530181 MsG0580028440.01.T01:CDS
TGTCGTAATCATCGTCGTCT+AGG 0.531203 5:-80530040 None:intergenic
CGGAGACATCCTTGGACTGG+TGG 0.536605 5:-80531054 None:intergenic
TAAAATGAAAGTTTACATCT+CGG 0.537047 5:-80531074 None:intergenic
GGCAGTAAACGGAATATCAT+CGG 0.552631 5:-80530552 None:intergenic
AAACGACAGAAGAGATCGAT+GGG 0.553805 5:-80530068 None:intergenic
TGAATTAAGTTTCGAAACAG+TGG 0.561172 5:-80530635 None:intergenic
GAGAACAACTAGTGTTTGAG+AGG 0.564199 5:-80530282 None:intergenic
GTGCAATACCAGCGTATCCA+AGG 0.570399 5:+80530839 MsG0580028440.01.T01:intron
TCGCGGCTTGAACCCATGCA+TGG 0.571423 5:-80530193 None:intergenic
TTCCCAATCCTTGGATACGC+TGG 0.572081 5:-80530847 None:intergenic
TACACATAAGGGATATTGAA+GGG 0.579649 5:+80530594 MsG0580028440.01.T01:CDS
CTACACATAAGGGATATTGA+AGG 0.591224 5:+80530593 MsG0580028440.01.T01:CDS
TTAGAACAGTACATGACCTA+AGG 0.595823 5:-80530905 None:intergenic
TAGTTGTTCTCAAACTTGAG+AGG 0.596004 5:+80530294 MsG0580028440.01.T01:CDS
TAGAAACTTGACATTAGCAA+TGG 0.603144 5:-80530573 None:intergenic
TCTCGGAGACATCCTTGGAC+TGG 0.609160 5:-80531057 None:intergenic
ACTGATTCTATCAATATCAA+CGG 0.617690 5:-80529874 None:intergenic
TACACCAACCCAATCATGAA+AGG 0.620672 5:-80530681 None:intergenic
AAAACGACAGAAGAGATCGA+TGG 0.622452 5:-80530069 None:intergenic
AAAGATTATCCACCAGTCCA+AGG 0.622697 5:+80531045 MsG0580028440.01.T01:CDS
AACCAATTTGAACAAGAACA+CGG 0.642024 5:-80530510 None:intergenic
GATTCTATCAATATCAACGG+AGG 0.678408 5:-80529871 None:intergenic
AAACTCTAGAAAGACACTTG+AGG 0.682781 5:-80530148 None:intergenic
AACGACAGAAGAGATCGATG+GGG 0.759414 5:-80530067 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAAATTCTTTTTATTAAAA+AGG + Chr5:80530733-80530752 MsG0580028440.01.T01:CDS 10.0%
!! ACTTAATTCATATTGAACTA+TGG + Chr5:80530648-80530667 MsG0580028440.01.T01:CDS 20.0%
!! TAAAATGAAAGTTTACATCT+CGG - Chr5:80531077-80531096 None:intergenic 20.0%
!!! AATAAAAAGAATTTGAAGCT+TGG - Chr5:80530729-80530748 None:intergenic 20.0%
!!! ATAAAAAGAATTTGAAGCTT+GGG - Chr5:80530728-80530747 None:intergenic 20.0%
!!! CTTTTTATTAAAAAGGTTTG+TGG + Chr5:80530740-80530759 MsG0580028440.01.T01:intron 20.0%
! TTCCATAATTTGATCATTTG+AGG - Chr5:80531027-80531046 None:intergenic 25.0%
!! ACTGATTCTATCAATATCAA+CGG - Chr5:80529877-80529896 None:intergenic 25.0%
!! GATTTGCAACTTATATTTTG+CGG + Chr5:80530955-80530974 MsG0580028440.01.T01:CDS 25.0%
AACCAATTTGAACAAGAACA+CGG - Chr5:80530513-80530532 None:intergenic 30.0%
AACTGACGAATTTCAAATGT+AGG - Chr5:80530370-80530389 None:intergenic 30.0%
ACTGACGAATTTCAAATGTA+GGG - Chr5:80530369-80530388 None:intergenic 30.0%
ATACTGCTTGTCTTAGTTAT+AGG + Chr5:80530450-80530469 MsG0580028440.01.T01:CDS 30.0%
ATGTCAAGTTTCTACACATA+AGG + Chr5:80530582-80530601 MsG0580028440.01.T01:CDS 30.0%
CTCCTCAAATGATCAAATTA+TGG + Chr5:80531022-80531041 MsG0580028440.01.T01:CDS 30.0%
GTATGCAAATCTTGTAGAAT+AGG - Chr5:80530434-80530453 None:intergenic 30.0%
TACACATAAGGGATATTGAA+GGG + Chr5:80530594-80530613 MsG0580028440.01.T01:CDS 30.0%
TAGAAACTTGACATTAGCAA+TGG - Chr5:80530576-80530595 None:intergenic 30.0%
TGAATTAAGTTTCGAAACAG+TGG - Chr5:80530638-80530657 None:intergenic 30.0%
TGTCAAGTTTCTACACATAA+GGG + Chr5:80530583-80530602 MsG0580028440.01.T01:CDS 30.0%
TTGCATCGTCAAAAATGAAA+TGG - Chr5:80530016-80530035 None:intergenic 30.0%
!! CATTTGAAATTCGTCAGTTT+TGG + Chr5:80530371-80530390 MsG0580028440.01.T01:CDS 30.0%
!!! TTGAGGTGAAATGTTTTGAT+GGG - Chr5:80530134-80530153 None:intergenic 30.0%
AAATTGGTTAGAGCCGATAT+TGG + Chr5:80530524-80530543 MsG0580028440.01.T01:CDS 35.0%
ACATTAGCAATGGCAGTAAA+CGG - Chr5:80530566-80530585 None:intergenic 35.0%
ACTGTGTTTCTTATCACCTT+AGG + Chr5:80530889-80530908 MsG0580028440.01.T01:CDS 35.0%
ATCATCGGATGAACCAATAT+CGG - Chr5:80530540-80530559 None:intergenic 35.0%
ATCCGTGTTCTTGTTCAAAT+TGG + Chr5:80530508-80530527 MsG0580028440.01.T01:CDS 35.0%
ATGTGAGAAAGTAGTTCGTT+AGG - Chr5:80529906-80529925 None:intergenic 35.0%
ATTGAAGGGTCTTCTTTCAA+AGG + Chr5:80530608-80530627 MsG0580028440.01.T01:CDS 35.0%
CAAATCTTGTAGAATAGGAC+AGG - Chr5:80530429-80530448 None:intergenic 35.0%
CTACACATAAGGGATATTGA+AGG + Chr5:80530593-80530612 MsG0580028440.01.T01:CDS 35.0%
GATTCTATCAATATCAACGG+AGG - Chr5:80529874-80529893 None:intergenic 35.0%
GTCAAAAATGAAATGGAGAG+TGG - Chr5:80530009-80530028 None:intergenic 35.0%
TAGTGTTTGAGAGGTGAAAA+TGG - Chr5:80530276-80530295 None:intergenic 35.0%
TAGTTGTTCTCAAACTTGAG+AGG + Chr5:80530294-80530313 MsG0580028440.01.T01:CDS 35.0%
TTAGAACAGTACATGACCTA+AGG - Chr5:80530908-80530927 None:intergenic 35.0%
TTGTGACTCCTTTCATGATT+GGG + Chr5:80530673-80530692 MsG0580028440.01.T01:CDS 35.0%
TTTGTGACTCCTTTCATGAT+TGG + Chr5:80530672-80530691 MsG0580028440.01.T01:CDS 35.0%
! AAACTCTAGAAAGACACTTG+AGG - Chr5:80530151-80530170 None:intergenic 35.0%
! CTTATATTTTGCGGAATGCT+AGG + Chr5:80530964-80530983 MsG0580028440.01.T01:CDS 35.0%
! TTTGACATTACGTTGTTTCG+CGG - Chr5:80530213-80530232 None:intergenic 35.0%
!! CTTGAGGTGAAATGTTTTGA+TGG - Chr5:80530135-80530154 None:intergenic 35.0%
!!! AAATGTAGGGTTTTGAGAGA+TGG - Chr5:80530356-80530375 None:intergenic 35.0%
AAAACGACAGAAGAGATCGA+TGG - Chr5:80530072-80530091 None:intergenic 40.0%
AAACGACAGAAGAGATCGAT+GGG - Chr5:80530071-80530090 None:intergenic 40.0%
AAAGATTATCCACCAGTCCA+AGG + Chr5:80531045-80531064 MsG0580028440.01.T01:CDS 40.0%
ACACAGTCATGAGCTGAAAT+TGG - Chr5:80530876-80530895 None:intergenic 40.0%
ATCGTAAAAGCTTCCATGCA+TGG + Chr5:80530180-80530199 MsG0580028440.01.T01:CDS 40.0%
CACAGTCATGAGCTGAAATT+GGG - Chr5:80530875-80530894 None:intergenic 40.0%
GAGAACAACTAGTGTTTGAG+AGG - Chr5:80530285-80530304 None:intergenic 40.0%
GGCAGTAAACGGAATATCAT+CGG - Chr5:80530555-80530574 None:intergenic 40.0%
TACACCAACCCAATCATGAA+AGG - Chr5:80530684-80530703 None:intergenic 40.0%
TCGTAAAAGCTTCCATGCAT+GGG + Chr5:80530181-80530200 MsG0580028440.01.T01:CDS 40.0%
! GAAGAGTGAAGTCCATCTTT+TGG - Chr5:80529976-80529995 None:intergenic 40.0%
!! AAGTCCATCTTTTGGAAAGG+AGG - Chr5:80529968-80529987 None:intergenic 40.0%
!! AGTCCATCTTTTGGAAAGGA+GGG - Chr5:80529967-80529986 None:intergenic 40.0%
!! GTGAAGTCCATCTTTTGGAA+AGG - Chr5:80529971-80529990 None:intergenic 40.0%
!!! GGTGAAATGTTTTGATGGGT+TGG - Chr5:80530130-80530149 None:intergenic 40.0%
!!! TGTTTTGATGGGTTGGTTGA+TGG - Chr5:80530123-80530142 None:intergenic 40.0%
AACGACAGAAGAGATCGATG+GGG - Chr5:80530070-80530089 None:intergenic 45.0%
AATTGGGCATTCCCAATCCT+TGG - Chr5:80530859-80530878 None:intergenic 45.0%
ATACCAGCGTATCCAAGGAT+TGG + Chr5:80530844-80530863 MsG0580028440.01.T01:CDS 45.0%
CAACCCTCCTTTCCAAAAGA+TGG + Chr5:80529961-80529980 MsG0580028440.01.T01:CDS 45.0%
GACTCCTTTCATGATTGGGT+TGG + Chr5:80530677-80530696 MsG0580028440.01.T01:CDS 45.0%
GCTGGTATTGCACTGTCAAA+GGG - Chr5:80530832-80530851 None:intergenic 45.0%
TACCAGCGTATCCAAGGATT+GGG + Chr5:80530845-80530864 MsG0580028440.01.T01:CDS 45.0%
TGTCGTAATCATCGTCGTCT+AGG - Chr5:80530043-80530062 None:intergenic 45.0%
TTACATCTCGGAGACATCCT+TGG - Chr5:80531065-80531084 None:intergenic 45.0%
!! TCTTTTGGAAAGGAGGGTTG+TGG - Chr5:80529961-80529980 None:intergenic 45.0%
!!! GTAGGGTTTTGAGAGATGGA+AGG - Chr5:80530352-80530371 None:intergenic 45.0%
CGCTGGTATTGCACTGTCAA+AGG - Chr5:80530833-80530852 None:intergenic 50.0%
GTGCAATACCAGCGTATCCA+AGG + Chr5:80530839-80530858 MsG0580028440.01.T01:intron 50.0%
TTCCCAATCCTTGGATACGC+TGG - Chr5:80530850-80530869 None:intergenic 50.0%
!! ATGGGTTGGTTGATGGCATG+TGG - Chr5:80530116-80530135 None:intergenic 50.0%
TCTCGGAGACATCCTTGGAC+TGG - Chr5:80531060-80531079 None:intergenic 55.0%
TCGCGGCTTGAACCCATGCA+TGG - Chr5:80530196-80530215 None:intergenic 60.0%
! CGGAGACATCCTTGGACTGG+TGG - Chr5:80531057-80531076 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 80529858 80531097 80529858 ID=MsG0580028440.01;Name=MsG0580028440.01
Chr5 mRNA 80529858 80531097 80529858 ID=MsG0580028440.01.T01;Parent=MsG0580028440.01;Name=MsG0580028440.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|384
Chr5 exon 80529858 80530754 80529858 ID=MsG0580028440.01.T01:exon:23732;Parent=MsG0580028440.01.T01
Chr5 exon 80530840 80531097 80530840 ID=MsG0580028440.01.T01:exon:23733;Parent=MsG0580028440.01.T01
Chr5 CDS 80529858 80530754 80529858 ID=MsG0580028440.01.T01:cds;Parent=MsG0580028440.01.T01
Chr5 CDS 80530840 80531097 80530840 ID=MsG0580028440.01.T01:cds;Parent=MsG0580028440.01.T01
Gene Sequence

>MsG0580028440.01.T01

ATGAAGAAGTCAGCCTCCGTTGATATTGATAGAATCAGTAACTTACCTAACGAACTACTTTCTCACATTCTCTCTTTTCTCTCAATCGAACAAGCTTTCACCACAACCCTCCTTTCCAAAAGATGGACTTCACTCTTCTATTCACTCTCCACTCTCCATTTCATTTTTGACGATGCAAACGTCCTAGACGACGATGATTACGACAATGTCCCCATCGATCTCTTCTGTCGTTTTGTCGATACACTCATGCTCTCTCCACATGCCATCAACCAACCCATCAAAACATTTCACCTCAAGTGTCTTTCTAGAGTTTACAAAATTGATCGTAAAAGCTTCCATGCATGGGTTCAAGCCGCGAAACAACGTAATGTCAAAGAATTTCATCTTTTCATGAATAATGAAACATTGAATCACACCATTTTCACCTCTCAAACACTAGTTGTTCTCAAACTTGAGAGGTTAAAAGTTAAAGCTCGAATTTTGCGTGTTCACCTTCCATCTCTCAAAACCCTACATTTGAAATTCGTCAGTTTTGGAATGCAGAGTGATTTTATCAAAATTCTTAATGCCTGTCCTATTCTACAAGATTTGCATACTGCTTGTCTTAGTTATAGGAGACATGATGAAAATAATAAATCAGAACAATTTAAATCCGTGTTCTTGTTCAAATTGGTTAGAGCCGATATTGGTTCATCCGATGATATTCCGTTTACTGCCATTGCTAATGTCAAGTTTCTACACATAAGGGATATTGAAGGGTCTTCTTTCAAAGGCATTCCACTGTTTCGAAACTTAATTCATATTGAACTATGGTTTTGTGACTCCTTTCATGATTGGGTTGGTGTAGTGTCATTGCTTCAACATTGTCCCAAGCTTCAAATTCTTTTTATTAAAAAGTGCAATACCAGCGTATCCAAGGATTGGGAATGCCCAATTTCAGCTCATGACTGTGTTTCTTATCACCTTAGGTCATGTACTGTTCTAAATTTTGAAGACTCTGACAACGATCTTCGATTTGCAACTTATATTTTGCGGAATGCTAGGCTTTTAGAAGTCATGAAAATCAATGTTAAAGCTAGCTCCTCAAATGATCAAATTATGGAAAGATTATCCACCAGTCCAAGGATGTCTCCGAGATGTAAACTTTCATTTTAA

Protein sequence

>MsG0580028440.01.T01

MKKSASVDIDRISNLPNELLSHILSFLSIEQAFTTTLLSKRWTSLFYSLSTLHFIFDDANVLDDDDYDNVPIDLFCRFVDTLMLSPHAINQPIKTFHLKCLSRVYKIDRKSFHAWVQAAKQRNVKEFHLFMNNETLNHTIFTSQTLVVLKLERLKVKARILRVHLPSLKTLHLKFVSFGMQSDFIKILNACPILQDLHTACLSYRRHDENNKSEQFKSVFLFKLVRADIGSSDDIPFTAIANVKFLHIRDIEGSSFKGIPLFRNLIHIELWFCDSFHDWVGVVSLLQHCPKLQILFIKKCNTSVSKDWECPISAHDCVSYHLRSCTVLNFEDSDNDLRFATYILRNARLLEVMKINVKASSSNDQIMERLSTSPRMSPRCKLSF*