AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028187.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028187.01.T01 MTR_1g066830 54.480 279 119 6 1 275 74 348 4.17e-90 273
MsG0580028187.01.T01 MTR_5g073420 51.439 278 116 5 1 275 78 339 4.23e-89 270
MsG0580028187.01.T01 MTR_5g058100 50.896 279 125 6 1 275 75 345 2.06e-82 253
MsG0580028187.01.T01 MTR_6g040270 50.542 277 125 4 1 275 74 340 1.10e-81 251
MsG0580028187.01.T01 MTR_1089s0010 52.347 277 118 5 1 275 74 338 2.59e-80 247
MsG0580028187.01.T01 MTR_5g058000 49.819 277 123 4 1 275 74 336 3.73e-76 236
MsG0580028187.01.T01 MTR_1g085120 46.975 281 138 5 1 275 158 433 8.19e-71 226
MsG0580028187.01.T01 MTR_1g085120 46.975 281 138 5 1 275 233 508 5.32e-70 226
MsG0580028187.01.T01 MTR_6g022500 44.964 278 144 5 1 275 167 438 1.83e-69 222
MsG0580028187.01.T01 MTR_4g039440 45.230 283 141 7 1 275 95 371 1.84e-68 218
MsG0580028187.01.T01 MTR_6g022520 46.479 284 134 8 1 275 1 275 7.12e-60 193
MsG0580028187.01.T01 MTR_5g076150 52.055 219 86 5 44 245 11 227 5.96e-59 188
MsG0580028187.01.T01 MTR_6g022360 41.844 282 150 7 1 275 96 370 2.36e-57 189
MsG0580028187.01.T01 MTR_5g061680 45.600 250 101 6 1 248 78 294 4.14e-57 186
MsG0580028187.01.T01 MTR_6g011460 42.446 278 148 5 1 275 112 380 7.42e-56 186
MsG0580028187.01.T01 MTR_7g055943 40.702 285 152 6 1 275 106 383 1.76e-54 182
MsG0580028187.01.T01 MTR_5g007410 40.569 281 159 6 1 275 92 370 1.31e-53 180
MsG0580028187.01.T01 MTR_0009s0080 40.493 284 155 9 1 275 84 362 7.97e-53 178
MsG0580028187.01.T01 MTR_1g108820 39.007 282 149 8 7 275 76 347 4.85e-49 167
MsG0580028187.01.T01 MTR_7g026500 40.068 292 144 10 2 275 81 359 3.00e-48 165
MsG0580028187.01.T01 MTR_6g045333 38.652 282 164 6 1 275 129 408 1.06e-45 159
MsG0580028187.01.T01 MTR_1g085120 43.668 229 119 4 1 224 245 468 1.99e-45 159
MsG0580028187.01.T01 MTR_5g045170 39.161 286 156 9 1 275 75 353 3.04e-45 157
MsG0580028187.01.T01 MTR_5g045510 37.857 280 146 8 1 275 78 334 5.96e-43 150
MsG0580028187.01.T01 MTR_1g108800 38.351 279 141 8 7 275 47 304 2.31e-42 148
MsG0580028187.01.T01 MTR_3g095600 38.129 278 83 7 1 275 72 263 6.33e-40 140
MsG0580028187.01.T01 MTR_3g071850 35.439 285 169 9 1 275 92 371 2.24e-39 146
MsG0580028187.01.T01 MTR_5g033200 50.725 138 59 2 138 275 13 141 1.18e-37 131
MsG0580028187.01.T01 MTR_2g036470 36.301 292 156 11 1 275 80 358 9.59e-37 135
MsG0580028187.01.T01 MTR_5g039470 36.042 283 166 8 1 275 51 326 1.16e-36 133
MsG0580028187.01.T01 MTR_1g108820 37.662 231 123 6 7 224 76 298 2.63e-35 130
MsG0580028187.01.T01 MTR_6g044572 37.597 258 125 6 25 275 119 347 2.08e-34 128
MsG0580028187.01.T01 MTR_5g054920 43.258 178 88 5 103 275 3 172 2.29e-34 123
MsG0580028187.01.T01 MTR_7g088260 33.696 276 161 7 10 275 162 425 7.03e-34 128
MsG0580028187.01.T01 MTR_6g044560 37.597 258 125 6 25 275 295 523 2.56e-33 128
MsG0580028187.01.T01 MTR_5g063950 34.752 282 168 9 1 275 52 324 2.10e-32 122
MsG0580028187.01.T01 MTR_1g041245 32.990 291 164 12 1 275 74 349 1.41e-31 120
MsG0580028187.01.T01 MTR_3g107120 34.276 283 162 9 11 280 93 364 1.84e-31 120
MsG0580028187.01.T01 MTR_3g095630 47.097 155 69 5 124 275 2 146 2.04e-31 115
MsG0580028187.01.T01 MTR_5g039450 32.979 282 159 5 1 275 72 330 4.06e-31 119
MsG0580028187.01.T01 MTR_5g073370 35.714 280 145 13 11 272 77 339 1.32e-30 118
MsG0580028187.01.T01 MTR_7g034120 30.450 289 169 10 1 273 1 273 1.38e-30 116
MsG0580028187.01.T01 MTR_7g034115 32.534 292 161 13 1 275 74 346 3.02e-30 117
MsG0580028187.01.T01 MTR_1g059860 33.217 286 144 8 31 277 38 315 3.22e-30 116
MsG0580028187.01.T01 MTR_7g056277 33.456 272 153 9 9 271 334 586 3.26e-29 116
MsG0580028187.01.T01 MTR_7g098510 31.834 289 166 8 2 275 81 353 3.88e-29 114
MsG0580028187.01.T01 MTR_5g031970 33.214 280 155 10 1 275 66 318 6.53e-29 113
MsG0580028187.01.T01 MTR_1377s0010 48.413 126 55 3 151 275 6 122 9.62e-29 107
MsG0580028187.01.T01 MTR_7g056287 32.721 272 155 9 9 271 78 330 2.98e-28 111
MsG0580028187.01.T01 MTR_7g007080 34.564 298 148 16 4 275 72 348 3.44e-28 111
MsG0580028187.01.T01 MTR_7g098480 32.014 278 174 7 4 275 83 351 3.47e-28 112
MsG0580028187.01.T01 MTR_7g098570 31.128 257 165 5 24 275 106 355 8.56e-28 112
MsG0580028187.01.T01 MTR_3g108150 31.724 290 168 9 1 275 75 349 1.00e-27 110
MsG0580028187.01.T01 MTR_7g056433 30.216 278 171 8 11 275 84 351 5.24e-27 108
MsG0580028187.01.T01 MTR_3g108560 32.646 291 157 12 2 275 83 351 7.17e-27 108
MsG0580028187.01.T01 MTR_3g071790 35.028 177 109 3 103 274 27 202 1.95e-26 103
MsG0580028187.01.T01 MTR_3g087260 33.624 229 136 4 54 275 200 419 7.57e-26 106
MsG0580028187.01.T01 MTR_7g032370 31.560 282 154 11 8 275 59 315 1.56e-25 103
MsG0580028187.01.T01 MTR_5g073340 35.417 240 130 10 25 249 71 300 2.28e-25 102
MsG0580028187.01.T01 MTR_5g039490 32.526 289 145 9 1 275 86 338 3.44e-25 103
MsG0580028187.01.T01 MTR_3g109982 35.965 228 129 8 55 275 220 437 6.21e-25 104
MsG0580028187.01.T01 MTR_3g109982 38.983 118 65 3 2 116 76 189 6.96e-12 65.9
MsG0580028187.01.T01 MTR_3g107100 31.399 293 165 11 1 275 77 351 4.95e-24 100
MsG0580028187.01.T01 MTR_5g008920 29.044 272 177 7 11 275 83 345 5.36e-24 100
MsG0580028187.01.T01 MTR_5g058350 52.000 100 48 0 18 117 64 163 5.58e-24 95.9
MsG0580028187.01.T01 MTR_7g032380 28.723 282 152 10 4 275 77 319 2.94e-23 97.8
MsG0580028187.01.T01 MTR_7g007340 33.449 287 139 13 26 280 63 329 3.25e-23 97.8
MsG0580028187.01.T01 MTR_7g115270 29.293 297 174 12 10 280 83 369 1.47e-22 96.3
MsG0580028187.01.T01 MTR_0492s0020 29.779 272 169 9 10 275 157 412 4.93e-22 95.1
MsG0580028187.01.T01 MTR_0543s0010 28.929 280 177 9 2 275 149 412 5.49e-22 95.1
MsG0580028187.01.T01 MTR_5g008950 27.915 283 178 7 6 275 60 329 8.97e-22 94.0
MsG0580028187.01.T01 MTR_2g007450 27.010 311 170 12 15 275 84 387 1.17e-21 94.0
MsG0580028187.01.T01 MTR_7g056020 33.761 234 123 7 56 275 121 336 2.20e-21 94.0
MsG0580028187.01.T01 MTR_1g053025 29.730 259 158 9 34 275 105 356 2.55e-21 92.8
MsG0580028187.01.T01 MTR_3g036250 27.599 279 167 7 10 275 76 332 1.46e-20 90.5
MsG0580028187.01.T01 MTR_3g023630 29.123 285 177 7 1 275 71 340 3.74e-20 89.4
MsG0580028187.01.T01 MTR_2g007400 29.758 289 148 14 25 275 99 370 5.85e-20 89.0
MsG0580028187.01.T01 MTR_5g073400 41.860 129 68 4 7 133 3 126 8.98e-20 83.6
MsG0580028187.01.T01 MTR_3g107160 29.008 262 154 9 31 275 105 351 1.28e-19 88.2
MsG0580028187.01.T01 MTR_1g107385 30.252 238 128 8 59 275 170 390 2.17e-19 87.8
MsG0580028187.01.T01 MTR_3g082890 27.832 309 183 10 1 280 157 454 2.92e-19 87.4
MsG0580028187.01.T01 MTR_7g075820 27.632 304 177 10 1 275 72 361 3.10e-19 87.0
MsG0580028187.01.T01 MTR_3g040700 26.087 276 170 9 8 271 112 365 1.34e-18 85.5
MsG0580028187.01.T01 MTR_4g080610 31.604 212 112 7 82 275 124 320 1.82e-18 84.3
MsG0580028187.01.T01 MTR_7g033990 28.767 292 172 13 1 275 74 346 2.18e-18 84.7
MsG0580028187.01.T01 MTR_7g033915 27.178 287 165 12 1 275 74 328 5.99e-18 83.2
MsG0580028187.01.T01 MTR_3g108560 31.646 237 126 10 2 224 83 297 7.03e-18 82.4
MsG0580028187.01.T01 MTR_3g026920 28.992 238 127 6 55 275 164 376 4.47e-17 80.9
MsG0580028187.01.T01 MTR_7g022105 32.174 230 133 9 59 275 169 388 1.04e-16 79.7
MsG0580028187.01.T01 MTR_7g021990 32.618 233 128 9 59 275 168 387 1.27e-16 79.7
MsG0580028187.01.T01 MTR_7g021950 32.618 233 128 9 59 275 168 387 1.30e-16 79.7
MsG0580028187.01.T01 MTR_3g099830 30.453 243 120 10 59 275 122 341 1.76e-16 79.0
MsG0580028187.01.T01 MTR_6g033095 54.167 72 32 1 205 275 108 179 5.66e-16 74.7
MsG0580028187.01.T01 MTR_2g007500 29.388 245 145 9 34 257 95 332 6.37e-16 77.0
MsG0580028187.01.T01 MTR_7g083740 29.703 202 120 4 84 275 143 332 7.65e-16 77.0
MsG0580028187.01.T01 MTR_4g098590 28.731 268 148 8 34 275 99 349 7.97e-16 77.0
MsG0580028187.01.T01 MTR_5g083890 30.041 243 133 10 55 275 142 369 2.80e-15 75.9
MsG0580028187.01.T01 MTR_5g024060 38.835 103 60 2 175 275 72 173 3.17e-15 73.9
MsG0580028187.01.T01 MTR_2g007360 28.452 239 130 9 64 275 115 339 4.21e-15 75.1
MsG0580028187.01.T01 MTR_2g005990 31.502 273 142 13 32 275 106 362 7.77e-15 74.3
MsG0580028187.01.T01 MTR_5g061410 32.000 200 113 8 35 224 81 267 1.60e-14 72.4
MsG0580028187.01.T01 MTR_7g056420 26.573 286 162 11 10 280 80 332 1.60e-14 73.9
MsG0580028187.01.T01 MTR_7g056430 26.573 286 162 11 10 280 80 332 1.94e-14 73.9
MsG0580028187.01.T01 MTR_3g095640 52.222 90 38 3 1 85 86 175 3.42e-14 69.3
MsG0580028187.01.T01 MTR_2g008310 32.068 237 130 10 54 275 118 338 4.24e-14 72.0
MsG0580028187.01.T01 MTR_2g007090 31.401 207 107 6 77 275 82 261 5.83e-14 70.9
MsG0580028187.01.T01 MTR_7g060470 27.798 277 165 10 21 275 91 354 6.13e-14 71.6
MsG0580028187.01.T01 MTR_3g467400 28.571 259 133 10 27 275 113 329 6.96e-14 71.2
MsG0580028187.01.T01 MTR_2g008320 33.198 247 126 11 54 280 172 399 7.37e-14 71.6
MsG0580028187.01.T01 MTR_7g007370 36.905 168 86 6 59 222 98 249 1.23e-13 70.5
MsG0580028187.01.T01 MTR_7g075800 26.820 261 140 11 55 275 141 390 1.69e-12 67.8
MsG0580028187.01.T01 MTR_3g110010 33.721 172 100 6 55 222 220 381 2.99e-12 67.0
MsG0580028187.01.T01 MTR_3g110010 38.983 118 65 3 2 116 76 189 6.98e-12 65.9
MsG0580028187.01.T01 MTR_7g056280 30.481 187 101 7 106 275 367 541 1.40e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 47 sgRNAs with CRISPR-Local

Find 65 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTGGCAATGTCCAATTT+TGG 0.180465 5:+76315382 MsG0580028187.01.T01:CDS
TTGCCAATCCTTAGATAAAT+TGG 0.186929 5:-76315369 None:intergenic
TTCAACTCCGCTTATGTTTA+GGG 0.228049 5:+76315163 MsG0580028187.01.T01:CDS
ATTCAACTCCGCTTATGTTT+AGG 0.233274 5:+76315162 MsG0580028187.01.T01:CDS
ATCCTACATTTGAAATTTGT+TGG 0.295155 5:+76314862 MsG0580028187.01.T01:CDS
ACACATTCAAGATCCAAAAT+TGG 0.299269 5:-76315395 None:intergenic
GTGGCTTACCAATTTATCTA+AGG 0.319724 5:+76315361 MsG0580028187.01.T01:intron
CCTCAAGTTTCATAACTACT+AGG 0.345024 5:-76314789 None:intergenic
TTTCATAACTACTAGGGTTT+CGG 0.354655 5:-76314782 None:intergenic
GGGTTTACTGACTTCTATCT+TGG 0.358967 5:+76315183 MsG0580028187.01.T01:CDS
TGTATTATTTATAACTTTGA+AGG 0.359111 5:+76315437 MsG0580028187.01.T01:CDS
TTCTTCTACAATTAGATGCT+TGG 0.373193 5:-76315521 None:intergenic
ATTGACATTCCGCAGAATAT+AGG 0.380450 5:-76315486 None:intergenic
TGCTCTAACACACTTGGATA+AGG 0.394060 5:-76315007 None:intergenic
TTACTGACTTCTATCTTGGC+TGG 0.408573 5:+76315187 MsG0580028187.01.T01:CDS
GCTCTAACACACTTGGATAA+GGG 0.411582 5:-76315006 None:intergenic
TACAAATAATAAACACAGAA+AGG 0.424776 5:+76315082 MsG0580028187.01.T01:CDS
CTCAACACAACGCCGTTTCG+CGG 0.426054 5:-76314707 None:intergenic
ACATTATAAAATACATCAAA+TGG 0.429945 5:-76315051 None:intergenic
ACTTCTATCTTGGCTGGAAT+GGG 0.436699 5:+76315193 MsG0580028187.01.T01:CDS
TTACCAATTTATCTAAGGAT+TGG 0.441904 5:+76315366 MsG0580028187.01.T01:CDS
TTCTACAATTAGATGCTTGG+AGG 0.471779 5:-76315518 None:intergenic
ACAAATAATAAACACAGAAA+GGG 0.472867 5:+76315083 MsG0580028187.01.T01:CDS
GACTTCTATCTTGGCTGGAA+TGG 0.475976 5:+76315192 MsG0580028187.01.T01:CDS
GTGTTCAAATCTTCTAGAAC+AGG 0.480215 5:-76314928 None:intergenic
AACCAACAAATTTCAAATGT+AGG 0.483121 5:-76314864 None:intergenic
AGTCAAGGTGTAGTTATTCA+TGG 0.501280 5:-76314743 None:intergenic
CTCAAGTTTCATAACTACTA+GGG 0.503525 5:-76314788 None:intergenic
CGCGAAACGGCGTTGTGTTG+AGG 0.511642 5:+76314708 MsG0580028187.01.T01:CDS
ATCAACACCTCTTTGACGCA+TGG 0.514280 5:+76314677 MsG0580028187.01.T01:CDS
CGCATTGAGAATATATTCAA+AGG 0.534391 5:+76315117 MsG0580028187.01.T01:CDS
CATGGGTGGAAGCCGCGAAA+CGG 0.540695 5:+76314695 MsG0580028187.01.T01:CDS
TATTCTCAATGCGATACATC+CGG 0.541036 5:-76315107 None:intergenic
TAATAAACACAGAAAGGGAC+CGG 0.564105 5:+76315088 MsG0580028187.01.T01:CDS
TCAACACCTCTTTGACGCAT+GGG 0.568559 5:+76314678 MsG0580028187.01.T01:CDS
GATATCTGCTCTAACACACT+TGG 0.578144 5:-76315013 None:intergenic
TAACTTTGAAGGCTCAGAAG+AGG 0.581790 5:+76315448 MsG0580028187.01.T01:CDS
AATTTGCAACCTATATTCTG+CGG 0.583626 5:+76315477 MsG0580028187.01.T01:CDS
TTTCAGATAGACAATACGTA+AGG 0.612815 5:-76314950 None:intergenic
CAGTAAACCCTAAACATAAG+CGG 0.615862 5:-76315170 None:intergenic
ACACCTCTTTGACGCATGGG+TGG 0.617105 5:+76314681 MsG0580028187.01.T01:CDS
AACTAGAACCACCACAGTTG+AGG 0.619736 5:-76314642 None:intergenic
CTTCCACCCATGCGTCAAAG+AGG 0.623293 5:-76314684 None:intergenic
CCTAGTAGTTATGAAACTTG+AGG 0.624967 5:+76314789 MsG0580028187.01.T01:CDS
ACGTTTAGCCTCAACTGTGG+TGG 0.629576 5:+76314634 MsG0580028187.01.T01:CDS
GAATATATTCAAAGGCACCC+CGG 0.676674 5:+76315125 MsG0580028187.01.T01:CDS
AAAACGTTTAGCCTCAACTG+TGG 0.719661 5:+76314631 MsG0580028187.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTATAAAATACATCAAA+TGG - Chr5:76315054-76315073 None:intergenic 15.0%
!! TGTATTATTTATAACTTTGA+AGG + Chr5:76315437-76315456 MsG0580028187.01.T01:CDS 15.0%
!! ACAAAAATAATACAACAGAA+GGG + Chr5:76314977-76314996 MsG0580028187.01.T01:CDS 20.0%
!! ACAAATAATAAACACAGAAA+GGG + Chr5:76315083-76315102 MsG0580028187.01.T01:CDS 20.0%
!! TACAAATAATAAACACAGAA+AGG + Chr5:76315082-76315101 MsG0580028187.01.T01:CDS 20.0%
!!! ATTTTAAAACTTTGAAGCTT+AGG - Chr5:76315243-76315262 None:intergenic 20.0%
!!! TCAAAGTTTTAAAATTGCAA+AGG + Chr5:76315248-76315267 MsG0580028187.01.T01:CDS 20.0%
! AACCAACAAATTTCAAATGT+AGG - Chr5:76314867-76314886 None:intergenic 25.0%
! ATGATATGAAGAAAATCAAC+AGG - Chr5:76315299-76315318 None:intergenic 25.0%
! GACAAAAATAATACAACAGA+AGG + Chr5:76314976-76314995 MsG0580028187.01.T01:CDS 25.0%
! TTACCAATTTATCTAAGGAT+TGG + Chr5:76315366-76315385 MsG0580028187.01.T01:CDS 25.0%
!! ATCCTACATTTGAAATTTGT+TGG + Chr5:76314862-76314881 MsG0580028187.01.T01:CDS 25.0%
!! TTTAAAATTGCAAAGGTTTG+TGG + Chr5:76315255-76315274 MsG0580028187.01.T01:intron 25.0%
!!! TGAATTAAGTTTTGAAACAC+CGG - Chr5:76315147-76315166 None:intergenic 25.0%
AATTTGCAACCTATATTCTG+CGG + Chr5:76315477-76315496 MsG0580028187.01.T01:CDS 30.0%
ACACATTCAAGATCCAAAAT+TGG - Chr5:76315398-76315417 None:intergenic 30.0%
CGCATTGAGAATATATTCAA+AGG + Chr5:76315117-76315136 MsG0580028187.01.T01:CDS 30.0%
CTCAAGTTTCATAACTACTA+GGG - Chr5:76314791-76314810 None:intergenic 30.0%
GGTTTCGGATGAAAAAATAA+TGG - Chr5:76314770-76314789 None:intergenic 30.0%
TGAAAAAATAATGGCAGTCA+AGG - Chr5:76314761-76314780 None:intergenic 30.0%
TTGCCAATCCTTAGATAAAT+TGG - Chr5:76315372-76315391 None:intergenic 30.0%
TTTCAGATAGACAATACGTA+AGG - Chr5:76314953-76314972 None:intergenic 30.0%
TTTCATAACTACTAGGGTTT+CGG - Chr5:76314785-76314804 None:intergenic 30.0%
!! AAATGTAGGATTTTGAGTGA+TGG - Chr5:76314853-76314872 None:intergenic 30.0%
!!! AATTAAGTTTTGAAACACCG+GGG - Chr5:76315145-76315164 None:intergenic 30.0%
!!! GAATTAAGTTTTGAAACACC+GGG - Chr5:76315146-76315165 None:intergenic 30.0%
AGTCAAGGTGTAGTTATTCA+TGG - Chr5:76314746-76314765 None:intergenic 35.0%
ATTCAACTCCGCTTATGTTT+AGG + Chr5:76315162-76315181 MsG0580028187.01.T01:CDS 35.0%
ATTGACATTCCGCAGAATAT+AGG - Chr5:76315489-76315508 None:intergenic 35.0%
CAGTAAACCCTAAACATAAG+CGG - Chr5:76315173-76315192 None:intergenic 35.0%
CCTAGTAGTTATGAAACTTG+AGG + Chr5:76314789-76314808 MsG0580028187.01.T01:CDS 35.0%
CCTCAAGTTTCATAACTACT+AGG - Chr5:76314792-76314811 None:intergenic 35.0%
CTTGAGGAGTTAAAAATTGC+AGG + Chr5:76314805-76314824 MsG0580028187.01.T01:CDS 35.0%
GTGGCTTACCAATTTATCTA+AGG + Chr5:76315361-76315380 MsG0580028187.01.T01:intron 35.0%
TAATAAACACAGAAAGGGAC+CGG + Chr5:76315088-76315107 MsG0580028187.01.T01:CDS 35.0%
TATTCTCAATGCGATACATC+CGG - Chr5:76315110-76315129 None:intergenic 35.0%
TTCAACTCCGCTTATGTTTA+GGG + Chr5:76315163-76315182 MsG0580028187.01.T01:CDS 35.0%
!! GTGTTCAAATCTTCTAGAAC+AGG - Chr5:76314931-76314950 None:intergenic 35.0%
!! TTGAGGCTAAACGTTTTGAT+GGG - Chr5:76314628-76314647 None:intergenic 35.0%
AAAACGTTTAGCCTCAACTG+TGG + Chr5:76314631-76314650 MsG0580028187.01.T01:CDS 40.0%
AATTGGTAAGCCACTGTCAA+AGG - Chr5:76315355-76315374 None:intergenic 40.0%
ACTTCTATCTTGGCTGGAAT+GGG + Chr5:76315193-76315212 MsG0580028187.01.T01:CDS 40.0%
ATTGGTAAGCCACTGTCAAA+GGG - Chr5:76315354-76315373 None:intergenic 40.0%
GATATCTGCTCTAACACACT+TGG - Chr5:76315016-76315035 None:intergenic 40.0%
GCTCTAACACACTTGGATAA+GGG - Chr5:76315009-76315028 None:intergenic 40.0%
TGCTCTAACACACTTGGATA+AGG - Chr5:76315010-76315029 None:intergenic 40.0%
! GTTGAGGCTAAACGTTTTGA+TGG - Chr5:76314629-76314648 None:intergenic 40.0%
! TAACTTTGAAGGCTCAGAAG+AGG + Chr5:76315448-76315467 MsG0580028187.01.T01:CDS 40.0%
!! GAATATATTCAAAGGCACCC+CGG + Chr5:76315125-76315144 MsG0580028187.01.T01:CDS 40.0%
!! GGATTGGCAATGTCCAATTT+TGG + Chr5:76315382-76315401 MsG0580028187.01.T01:CDS 40.0%
!! GGGTTTACTGACTTCTATCT+TGG + Chr5:76315183-76315202 MsG0580028187.01.T01:CDS 40.0%
!! TTACTGACTTCTATCTTGGC+TGG + Chr5:76315187-76315206 MsG0580028187.01.T01:CDS 40.0%
AACTAGAACCACCACAGTTG+AGG - Chr5:76314645-76314664 None:intergenic 45.0%
ATCAACACCTCTTTGACGCA+TGG + Chr5:76314677-76314696 MsG0580028187.01.T01:CDS 45.0%
GACTTCTATCTTGGCTGGAA+TGG + Chr5:76315192-76315211 MsG0580028187.01.T01:CDS 45.0%
GTTTGTATCCCCTTTGACAG+TGG + Chr5:76315342-76315361 MsG0580028187.01.T01:intron 45.0%
TCAACACCTCTTTGACGCAT+GGG + Chr5:76314678-76314697 MsG0580028187.01.T01:CDS 45.0%
TTGGTAAGCCACTGTCAAAG+GGG - Chr5:76315353-76315372 None:intergenic 45.0%
!! GGCTAAACGTTTTGATGGGT+TGG - Chr5:76314624-76314643 None:intergenic 45.0%
ACGTTTAGCCTCAACTGTGG+TGG + Chr5:76314634-76314653 MsG0580028187.01.T01:CDS 50.0%
ACACCTCTTTGACGCATGGG+TGG + Chr5:76314681-76314700 MsG0580028187.01.T01:CDS 55.0%
CTCAACACAACGCCGTTTCG+CGG - Chr5:76314710-76314729 None:intergenic 55.0%
CTTCCACCCATGCGTCAAAG+AGG - Chr5:76314687-76314706 None:intergenic 55.0%
CATGGGTGGAAGCCGCGAAA+CGG + Chr5:76314695-76314714 MsG0580028187.01.T01:CDS 60.0%
CGCGAAACGGCGTTGTGTTG+AGG + Chr5:76314708-76314727 MsG0580028187.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 76314598 76315532 76314598 ID=MsG0580028187.01;Name=MsG0580028187.01
Chr5 mRNA 76314598 76315532 76314598 ID=MsG0580028187.01.T01;Parent=MsG0580028187.01;Name=MsG0580028187.01.T01;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|2|0|280
Chr5 exon 76314598 76315269 76314598 ID=MsG0580028187.01.T01:exon:45991;Parent=MsG0580028187.01.T01
Chr5 exon 76315362 76315532 76315362 ID=MsG0580028187.01.T01:exon:45992;Parent=MsG0580028187.01.T01
Chr5 CDS 76314598 76315269 76314598 ID=MsG0580028187.01.T01:cds;Parent=MsG0580028187.01.T01
Chr5 CDS 76315362 76315532 76315362 ID=MsG0580028187.01.T01:cds;Parent=MsG0580028187.01.T01
Gene Sequence

>MsG0580028187.01.T01

ATGCTCTCTCGTCACTCATCAAGCCAACCCATCAAAACGTTTAGCCTCAACTGTGGTGGTTCTAGTTTCAGTGATTCTGATCAACACCTCTTTGACGCATGGGTGGAAGCCGCGAAACGGCGTTGTGTTGAGGAATTTCATCTATCCATGAATAACTACACCTTGACTGCCATTATTTTTTCATCCGAAACCCTAGTAGTTATGAAACTTGAGGAGTTAAAAATTGCAGGTGATAATTTGCATGTTGATCTTCCATCACTCAAAATCCTACATTTGAAATTTGTTGGTTTTGAAAATCGTAATGTTCTAAAAAAACTTCTCGATGCTTGTCCTGTTCTAGAAGATTTGAACACCTTACGTATTGTCTATCTGAAAGATGACAAAAATAATACAACAGAAGGGTTTAAACCCTTATCCAAGTGTGTTAGAGCAGATATCGATTCAAGTCATGTTCCATTTGATGTATTTTATAATGTCGAGTTTTTACAAATAATAAACACAGAAAGGGACCGGATGTATCGCATTGAGAATATATTCAAAGGCACCCCGGTGTTTCAAAACTTAATTCAACTCCGCTTATGTTTAGGGTTTACTGACTTCTATCTTGGCTGGAATGGGATAGTAAAACTTCTCAGACATTGTCCTAAGCTTCAAAGTTTTAAAATTGCAAAGTGGCTTACCAATTTATCTAAGGATTGGCAATGTCCAATTTTGGATCTTGAATGTGTTTTGTCTCATCTCAGATCTTGTATTATTTATAACTTTGAAGGCTCAGAAGAGGATCTTCAATTTGCAACCTATATTCTGCGGAATGTCAATGTTTTAATTCCTCCAAGCATCTAA
Protein sequence

>MsG0580028187.01.T01

MLSRHSSSQPIKTFSLNCGGSSFSDSDQHLFDAWVEAAKRRCVEEFHLSMNNYTLTAIIFSSETLVVMKLEELKIAGDNLHVDLPSLKILHLKFVGFENRNVLKKLLDACPVLEDLNTLRIVYLKDDKNNTTEGFKPLSKCVRADIDSSHVPFDVFYNVEFLQIINTERDRMYRIENIFKGTPVFQNLIQLRLCLGFTDFYLGWNGIVKLLRHCPKLQSFKIAKWLTNLSKDWQCPILDLECVLSHLRSCIIYNFEGSEEDLQFATYILRNVNVLIPPSI*