AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003609.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003609.01.T01 MTR_1g066830 90.155 386 37 1 1 385 1 386 0.0 691
MsG0180003609.01.T01 MTR_5g058100 60.938 384 141 5 5 385 6 383 5.36e-157 447
MsG0180003609.01.T01 MTR_1089s0010 60.825 388 139 4 1 385 1 378 8.97e-157 446
MsG0180003609.01.T01 MTR_5g058000 59.845 386 142 3 1 385 1 374 1.24e-154 441
MsG0180003609.01.T01 MTR_6g040270 55.814 387 160 3 1 384 1 379 1.25e-142 410
MsG0180003609.01.T01 MTR_5g073420 56.122 392 149 8 1 385 4 379 1.11e-141 408
MsG0180003609.01.T01 MTR_1g085120 54.381 388 158 8 8 385 92 470 1.25e-127 375
MsG0180003609.01.T01 MTR_1g085120 54.381 388 158 8 8 385 167 545 8.11e-127 376
MsG0180003609.01.T01 MTR_4g039440 53.788 396 159 12 2 385 28 411 2.74e-123 362
MsG0180003609.01.T01 MTR_6g011460 53.747 387 160 9 7 385 45 420 6.90e-122 359
MsG0180003609.01.T01 MTR_6g022500 52.094 382 172 7 7 384 100 474 7.45e-118 351
MsG0180003609.01.T01 MTR_7g055943 48.214 392 184 9 5 385 37 420 3.14e-104 314
MsG0180003609.01.T01 MTR_5g061680 51.393 323 120 6 2 320 5 294 3.76e-102 305
MsG0180003609.01.T01 MTR_6g022360 48.187 386 173 9 7 385 42 407 1.85e-101 306
MsG0180003609.01.T01 MTR_3g095600 47.200 375 111 8 6 377 2 292 4.04e-94 284
MsG0180003609.01.T01 MTR_7g026500 41.975 405 198 12 1 385 7 394 4.05e-93 285
MsG0180003609.01.T01 MTR_6g044572 43.373 415 171 10 7 385 1 387 1.61e-92 283
MsG0180003609.01.T01 MTR_6g022520 53.918 319 133 8 74 385 1 312 3.37e-92 280
MsG0180003609.01.T01 MTR_1g085120 53.691 298 121 6 8 296 179 468 1.22e-91 283
MsG0180003609.01.T01 MTR_6g044560 43.333 420 174 10 2 385 172 563 2.81e-91 285
MsG0180003609.01.T01 MTR_1g108820 42.211 398 202 11 1 384 1 384 1.92e-88 272
MsG0180003609.01.T01 MTR_6g045333 40.874 389 217 8 7 385 60 445 6.57e-86 268
MsG0180003609.01.T01 MTR_0009s0080 42.432 370 203 7 10 372 20 386 1.84e-85 266
MsG0180003609.01.T01 MTR_5g007410 38.071 394 229 6 5 384 14 406 2.58e-81 256
MsG0180003609.01.T01 MTR_5g076150 57.848 223 80 4 109 317 5 227 6.66e-80 245
MsG0180003609.01.T01 MTR_5g045170 42.308 390 202 13 7 385 13 390 6.59e-79 248
MsG0180003609.01.T01 MTR_3g071850 38.860 386 223 8 7 382 23 405 1.32e-76 253
MsG0180003609.01.T01 MTR_5g045510 39.323 384 205 10 6 384 10 370 1.80e-74 236
MsG0180003609.01.T01 MTR_2g036470 38.974 390 218 12 6 383 12 393 2.29e-67 218
MsG0180003609.01.T01 MTR_5g039450 37.922 385 201 9 5 383 3 355 7.86e-67 216
MsG0180003609.01.T01 MTR_3g095630 59.459 185 63 5 195 377 2 176 1.15e-65 207
MsG0180003609.01.T01 MTR_5g039490 40.103 389 191 11 5 383 17 373 1.68e-65 213
MsG0180003609.01.T01 MTR_1g108800 40.000 395 171 14 1 384 1 340 8.83e-65 210
MsG0180003609.01.T01 MTR_5g039470 39.640 333 187 8 24 348 1 327 1.38e-64 209
MsG0180003609.01.T01 MTR_1g108820 41.290 310 156 9 1 296 1 298 8.02e-62 202
MsG0180003609.01.T01 MTR_5g031970 36.623 385 190 9 7 383 15 353 1.05e-59 197
MsG0180003609.01.T01 MTR_1g041245 35.732 403 214 17 4 385 7 385 2.85e-59 197
MsG0180003609.01.T01 MTR_5g033200 60.694 173 54 3 209 377 11 173 1.47e-57 186
MsG0180003609.01.T01 MTR_5g073370 36.735 392 215 13 8 384 5 378 1.17e-56 190
MsG0180003609.01.T01 MTR_7g088260 35.606 396 212 13 8 385 91 461 4.72e-53 182
MsG0180003609.01.T01 MTR_7g056433 34.000 400 223 14 6 385 10 388 3.49e-52 179
MsG0180003609.01.T01 MTR_7g056287 36.041 394 211 13 8 385 3 371 2.24e-50 173
MsG0180003609.01.T01 MTR_2g007400 32.771 415 222 15 5 384 9 401 3.82e-50 174
MsG0180003609.01.T01 MTR_1377s0010 57.931 145 52 2 219 362 1 137 6.06e-50 165
MsG0180003609.01.T01 MTR_5g063950 33.418 392 219 10 1 383 1 359 7.86e-50 172
MsG0180003609.01.T01 MTR_7g056277 36.041 394 211 13 8 385 259 627 1.46e-49 177
MsG0180003609.01.T01 MTR_0543s0010 33.592 387 225 10 8 385 86 449 2.23e-49 172
MsG0180003609.01.T01 MTR_5g073340 34.018 341 164 10 1 321 1 300 4.62e-49 168
MsG0180003609.01.T01 MTR_2g007450 31.415 417 238 11 5 384 13 418 2.66e-48 169
MsG0180003609.01.T01 MTR_5g058350 48.990 198 72 3 1 196 1 171 4.58e-48 161
MsG0180003609.01.T01 MTR_7g033990 33.503 394 218 15 4 378 7 375 4.80e-46 163
MsG0180003609.01.T01 MTR_7g032380 31.592 402 206 17 2 385 5 355 6.50e-46 161
MsG0180003609.01.T01 MTR_3g095640 52.727 165 69 4 1 156 11 175 6.99e-46 155
MsG0180003609.01.T01 MTR_0492s0020 33.803 355 204 9 8 353 86 418 1.53e-45 162
MsG0180003609.01.T01 MTR_5g065100 34.884 387 193 14 10 385 10 348 3.37e-45 161
MsG0180003609.01.T01 MTR_5g054920 43.284 201 102 5 173 370 2 193 2.55e-44 152
MsG0180003609.01.T01 MTR_3g107160 31.250 400 224 15 8 384 10 381 1.15e-43 156
MsG0180003609.01.T01 MTR_7g033915 31.172 401 218 13 2 385 5 364 1.23e-43 155
MsG0180003609.01.T01 MTR_3g108150 33.083 399 221 12 8 385 13 386 1.47e-43 155
MsG0180003609.01.T01 MTR_7g115270 30.529 416 231 14 3 383 7 399 2.17e-42 153
MsG0180003609.01.T01 MTR_3g107100 33.498 406 221 15 8 384 11 396 4.01e-42 152
MsG0180003609.01.T01 MTR_7g007080 33.085 402 216 16 8 384 4 377 4.41e-42 152
MsG0180003609.01.T01 MTR_3g108560 32.412 398 220 15 8 385 20 388 5.20e-41 149
MsG0180003609.01.T01 MTR_7g098510 31.139 395 239 13 5 385 15 390 8.36e-41 148
MsG0180003609.01.T01 MTR_3g099830 31.961 413 199 16 5 384 9 372 3.99e-40 146
MsG0180003609.01.T01 MTR_3g107120 30.846 402 230 12 8 383 9 388 1.14e-39 145
MsG0180003609.01.T01 MTR_5g083890 31.894 417 223 15 8 383 6 402 1.48e-39 147
MsG0180003609.01.T01 MTR_5g008920 31.605 405 228 16 1 385 5 380 9.82e-39 143
MsG0180003609.01.T01 MTR_7g007340 32.908 392 189 19 7 378 12 349 2.63e-38 141
MsG0180003609.01.T01 MTR_7g034115 31.910 398 225 18 2 379 5 376 3.33e-38 141
MsG0180003609.01.T01 MTR_7g075820 30.637 408 231 13 8 384 6 392 4.83e-38 141
MsG0180003609.01.T01 MTR_1g053025 30.730 397 244 11 7 383 1 386 1.23e-37 140
MsG0180003609.01.T01 MTR_1g107385 31.504 419 230 15 1 384 25 421 4.45e-37 139
MsG0180003609.01.T01 MTR_7g098570 31.443 388 235 12 7 381 19 388 7.61e-37 139
MsG0180003609.01.T01 MTR_5g008950 29.293 396 228 13 10 385 1 364 2.78e-36 136
MsG0180003609.01.T01 MTR_1g059860 32.923 325 175 10 73 359 5 324 4.36e-36 134
MsG0180003609.01.T01 MTR_2g005990 31.905 420 215 18 6 384 4 393 1.05e-35 135
MsG0180003609.01.T01 MTR_7g032370 31.593 383 206 19 23 385 5 351 2.17e-35 133
MsG0180003609.01.T01 MTR_3g105060 28.536 403 227 14 4 385 10 372 1.02e-34 132
MsG0180003609.01.T01 MTR_3g467400 29.676 401 224 12 7 385 2 366 1.24e-34 131
MsG0180003609.01.T01 MTR_3g087260 34.909 275 147 6 125 385 200 456 1.47e-34 133
MsG0180003609.01.T01 MTR_3g087260 37.569 181 94 5 8 187 12 174 1.25e-18 87.4
MsG0180003609.01.T01 MTR_7g083740 28.645 391 229 10 6 385 15 366 3.79e-34 130
MsG0180003609.01.T01 MTR_7g098480 31.139 395 237 14 5 385 15 388 4.08e-34 132
MsG0180003609.01.T01 MTR_2g008320 30.732 410 221 17 5 384 49 425 1.06e-33 130
MsG0180003609.01.T01 MTR_3g023630 30.730 397 235 12 1 383 1 371 1.62e-33 128
MsG0180003609.01.T01 MTR_2g008310 31.000 400 223 16 7 384 1 369 1.69e-33 129
MsG0180003609.01.T01 MTR_3g036250 30.326 399 217 19 7 383 4 363 4.55e-33 127
MsG0180003609.01.T01 MTR_7g021990 30.964 394 229 15 4 376 44 415 5.00e-33 128
MsG0180003609.01.T01 MTR_7g034120 34.737 285 136 11 119 385 55 307 9.13e-33 125
MsG0180003609.01.T01 MTR_7g021950 30.808 396 227 16 4 376 44 415 1.16e-32 128
MsG0180003609.01.T01 MTR_2g007360 28.780 410 216 14 5 384 9 372 1.19e-32 126
MsG0180003609.01.T01 MTR_3g082890 28.537 410 238 14 8 385 97 483 1.74e-32 127
MsG0180003609.01.T01 MTR_7g060470 28.710 411 239 15 8 385 3 392 2.13e-32 125
MsG0180003609.01.T01 MTR_3g071790 37.634 186 109 3 166 346 19 202 1.18e-31 119
MsG0180003609.01.T01 MTR_7g022105 29.275 386 236 14 4 371 45 411 4.08e-31 123
MsG0180003609.01.T01 MTR_6g022390 51.493 134 55 3 4 128 1 133 1.18e-30 115
MsG0180003609.01.T01 MTR_3g040700 29.121 364 203 16 3 345 38 367 2.97e-30 120
MsG0180003609.01.T01 MTR_0571s0010 65.116 86 29 1 4 89 28 112 9.49e-30 111
MsG0180003609.01.T01 MTR_4g098590 29.620 368 222 10 10 353 1 355 1.44e-29 117
MsG0180003609.01.T01 MTR_3g108560 32.343 303 166 12 8 296 20 297 3.21e-29 115
MsG0180003609.01.T01 MTR_7g114710 28.218 404 223 13 2 385 7 363 3.68e-29 116
MsG0180003609.01.T01 MTR_7g056420 29.620 395 216 18 4 378 5 357 2.08e-28 117
MsG0180003609.01.T01 MTR_7g056430 29.620 395 216 18 4 378 5 357 2.10e-28 117
MsG0180003609.01.T01 MTR_3g082890 26.398 447 237 14 8 385 17 440 4.61e-28 114
MsG0180003609.01.T01 MTR_3g109982 36.154 260 140 11 130 378 224 468 1.57e-27 115
MsG0180003609.01.T01 MTR_3g109982 32.765 293 160 12 8 290 13 278 1.67e-23 102
MsG0180003609.01.T01 MTR_7g034110 28.792 389 198 14 4 376 7 332 5.12e-27 110
MsG0180003609.01.T01 MTR_7g056447 38.172 186 102 6 6 185 7 185 4.96e-26 106
MsG0180003609.01.T01 MTR_5g012840 27.882 373 192 14 27 385 8 317 1.57e-25 105
MsG0180003609.01.T01 MTR_5g024060 42.105 133 70 3 249 378 72 200 2.91e-25 103
MsG0180003609.01.T01 MTR_6g022410 62.069 87 32 1 299 385 21 106 9.58e-25 97.8
MsG0180003609.01.T01 MTR_7g056020 29.124 388 225 14 8 380 16 368 1.14e-24 106
MsG0180003609.01.T01 MTR_5g061410 30.872 298 170 11 4 296 1 267 1.46e-24 102
MsG0180003609.01.T01 MTR_8g085430 36.458 192 110 7 6 187 9 198 2.40e-24 102
MsG0180003609.01.T01 MTR_6g033095 63.750 80 28 1 279 357 110 189 3.28e-24 99.0
MsG0180003609.01.T01 MTR_2g007500 28.775 351 201 11 5 332 11 335 4.01e-24 102
MsG0180003609.01.T01 MTR_5g013500 28.809 361 207 15 46 385 33 364 1.68e-23 100
MsG0180003609.01.T01 MTR_4g080610 27.110 391 222 13 10 385 14 356 1.96e-23 100
MsG0180003609.01.T01 MTR_3g110010 32.765 293 160 12 8 290 13 278 2.32e-23 102
MsG0180003609.01.T01 MTR_3g110010 36.207 174 90 8 130 296 224 383 2.06e-12 69.3
MsG0180003609.01.T01 MTR_3g026920 28.436 422 226 16 4 383 15 402 7.55e-23 99.8
MsG0180003609.01.T01 MTR_7g007370 31.419 296 141 8 7 298 16 253 3.85e-22 96.7
MsG0180003609.01.T01 MTR_2g007550 27.595 395 197 13 5 383 11 332 4.51e-21 93.6
MsG0180003609.01.T01 MTR_8g058970 25.591 465 254 20 7 385 18 476 3.09e-20 92.4
MsG0180003609.01.T01 MTR_2g007090 33.333 240 120 9 153 385 87 293 3.67e-20 90.1
MsG0180003609.01.T01 MTR_5g084070 26.869 428 239 13 7 379 12 420 4.03e-20 92.0
MsG0180003609.01.T01 MTR_8g077460 26.316 418 215 17 8 385 10 374 6.77e-20 90.5
MsG0180003609.01.T01 MTR_4g032730 25.862 464 248 19 7 385 14 466 5.18e-19 89.0
MsG0180003609.01.T01 MTR_8g070950 26.802 444 234 20 8 385 15 433 1.39e-18 87.4
MsG0180003609.01.T01 MTR_8g014260 26.164 451 244 19 8 385 16 450 1.58e-18 87.4
MsG0180003609.01.T01 MTR_7g033945 33.708 178 99 6 2 167 5 175 1.08e-17 80.5
MsG0180003609.01.T01 MTR_8g062310 26.291 426 245 20 7 385 24 427 1.45e-17 84.3
MsG0180003609.01.T01 MTR_5g080710 25.352 426 255 12 7 379 32 447 1.35e-16 81.6
MsG0180003609.01.T01 MTR_2g083840 27.394 449 242 20 8 385 21 456 3.83e-16 80.1
MsG0180003609.01.T01 MTR_5g073400 40.800 125 65 4 79 200 2 120 3.95e-16 75.1
MsG0180003609.01.T01 MTR_7g034090 34.574 188 93 9 213 385 139 311 6.35e-16 79.3
MsG0180003609.01.T01 MTR_5g044790 37.086 151 60 4 265 383 290 437 6.78e-16 79.3
MsG0180003609.01.T01 MTR_4g056030 25.176 425 240 18 8 364 9 423 9.50e-16 79.0
MsG0180003609.01.T01 MTR_5g092960 25.161 465 253 21 1 385 12 461 1.07e-15 79.0
MsG0180003609.01.T01 MTR_4g134150 29.167 240 143 7 4 237 10 228 1.78e-15 75.5
MsG0180003609.01.T01 MTR_7g056280 28.125 224 126 9 176 383 366 570 2.95e-15 77.8
MsG0180003609.01.T01 MTR_7g056280 31.214 173 106 6 10 173 8 176 4.08e-11 65.1
MsG0180003609.01.T01 MTR_8g467800 24.892 462 246 19 2 385 14 452 6.48e-15 76.3
MsG0180003609.01.T01 MTR_3g106960 29.949 197 107 8 194 378 13 190 1.38e-14 73.2
MsG0180003609.01.T01 MTR_8g062270 24.565 460 245 19 7 385 15 453 3.28e-14 74.3
MsG0180003609.01.T01 MTR_3g114200 34.483 145 87 4 8 148 19 159 3.41e-14 70.1
MsG0180003609.01.T01 MTR_8g062010 25.688 436 251 21 8 385 9 429 4.87e-14 73.6
MsG0180003609.01.T01 MTR_7g022060 34.685 222 111 8 8 214 10 212 8.26e-14 72.0
MsG0180003609.01.T01 MTR_8g058965 30.806 211 122 8 7 194 12 221 8.56e-14 72.8
MsG0180003609.01.T01 MTR_7g021930 34.685 222 111 8 8 214 10 212 9.31e-14 72.0
MsG0180003609.01.T01 MTR_7g021970 34.685 222 111 8 8 214 10 212 9.31e-14 72.0
MsG0180003609.01.T01 MTR_2g020180 32.609 138 71 6 256 385 91 214 2.09e-13 69.3
MsG0180003609.01.T01 MTR_4g130200 22.597 385 237 11 8 364 20 371 3.60e-13 70.9
MsG0180003609.01.T01 MTR_7g033940 40.404 99 53 3 7 103 93 187 4.61e-13 68.6
MsG0180003609.01.T01 MTR_4g056020 23.697 422 250 17 8 364 9 423 7.16e-13 70.1
MsG0180003609.01.T01 MTR_8g468760 27.419 434 247 24 2 385 3 418 1.14e-12 69.3
MsG0180003609.01.T01 MTR_8g445780 26.546 388 197 17 8 329 13 378 2.94e-12 67.8
MsG0180003609.01.T01 MTR_7g081290 33.813 139 77 5 256 385 123 255 4.27e-12 66.2
MsG0180003609.01.T01 MTR_3g107940 36.364 132 63 5 258 380 88 207 1.65e-11 65.5
MsG0180003609.01.T01 MTR_4g093690 28.922 204 99 8 8 186 18 200 2.92e-11 63.9
MsG0180003609.01.T01 MTR_8g467800 30.808 198 117 7 2 187 14 203 2.93e-11 64.7
MsG0180003609.01.T01 MTR_1g090883 29.319 191 115 6 8 186 19 201 3.46e-11 64.7
MsG0180003609.01.T01 MTR_4g055990 29.333 225 111 10 8 187 9 230 9.28e-11 63.5
MsG0180003609.01.T01 MTR_4g055990 29.333 225 111 10 8 187 9 230 9.48e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003609.01.T01 AT4G26340 27.273 440 237 18 7 385 1 418 7.76e-26 108
MsG0180003609.01.T01 AT5G56420 26.512 430 250 15 8 385 6 421 8.62e-23 99.8
MsG0180003609.01.T01 AT5G56420 26.512 430 250 15 8 385 6 421 8.62e-23 99.8
MsG0180003609.01.T01 AT5G56420 26.512 430 250 15 8 385 6 421 8.62e-23 99.8
MsG0180003609.01.T01 AT3G50710 26.279 430 258 11 7 383 1 424 1.91e-22 98.6
MsG0180003609.01.T01 AT4G00160 26.067 445 243 15 8 385 16 441 4.09e-21 95.1
MsG0180003609.01.T01 AT4G00320 27.419 372 175 17 5 292 10 370 2.40e-20 93.2
MsG0180003609.01.T01 AT5G41840 26.020 392 182 14 8 303 14 393 2.77e-20 92.8
MsG0180003609.01.T01 AT5G41830 26.542 373 183 15 8 298 13 376 3.15e-20 92.8
MsG0180003609.01.T01 AT4G10400 26.157 432 242 13 7 385 1 408 2.11e-19 89.7
MsG0180003609.01.T01 AT4G10400 26.157 432 242 13 7 385 1 408 2.11e-19 89.7
MsG0180003609.01.T01 AT4G10400 26.157 432 242 13 7 385 1 408 2.11e-19 89.7
MsG0180003609.01.T01 AT3G52680 26.562 448 235 21 8 385 21 444 8.94e-19 88.2
MsG0180003609.01.T01 AT5G53640 30.978 184 114 4 8 187 22 196 7.01e-18 82.4
MsG0180003609.01.T01 AT3G59200 34.694 196 113 6 3 187 2 193 7.49e-18 84.7
MsG0180003609.01.T01 AT5G53635 33.862 189 103 6 10 187 2 179 1.02e-17 84.7
MsG0180003609.01.T01 AT5G22670 23.543 446 256 14 8 384 11 440 1.14e-17 84.7
MsG0180003609.01.T01 AT5G25850 35.417 192 103 9 4 187 16 194 1.29e-17 84.7
MsG0180003609.01.T01 AT4G22280 26.005 423 247 13 7 379 1 407 2.34e-17 83.6
MsG0180003609.01.T01 AT3G59200 34.694 196 113 6 3 187 2 193 2.55e-17 84.0
MsG0180003609.01.T01 AT3G58880 26.389 360 185 14 7 295 2 352 2.99e-17 83.6
MsG0180003609.01.T01 AT4G26350 24.091 440 260 17 7 385 1 427 4.81e-17 82.8
MsG0180003609.01.T01 AT5G56400 26.457 446 238 18 7 385 32 454 8.56e-17 82.0
MsG0180003609.01.T01 AT3G59190 25.053 471 237 20 3 379 7 455 9.44e-17 82.4
MsG0180003609.01.T01 AT3G59240 25.551 454 234 19 1 365 1 439 1.61e-16 81.6
MsG0180003609.01.T01 AT3G60040 25.463 432 220 21 8 360 13 421 4.67e-16 80.5
MsG0180003609.01.T01 AT3G59190 26.790 377 173 16 3 292 7 367 5.85e-16 79.3
MsG0180003609.01.T01 AT3G60040 25.463 432 220 21 8 360 232 640 8.38e-16 79.7
MsG0180003609.01.T01 AT3G60040 25.463 432 220 21 8 360 233 641 8.46e-16 79.7
MsG0180003609.01.T01 AT3G60040 25.352 426 228 20 8 360 230 638 9.48e-16 79.3
MsG0180003609.01.T01 AT3G60040 25.352 426 228 20 8 360 232 640 9.50e-16 79.3
MsG0180003609.01.T01 AT5G56380 25.219 456 246 19 7 385 1 438 9.75e-16 79.0
MsG0180003609.01.T01 AT5G56380 25.219 456 246 19 7 385 1 438 9.75e-16 79.0
MsG0180003609.01.T01 AT2G04230 25.325 462 232 19 8 385 13 445 1.46e-15 78.2
MsG0180003609.01.T01 AT4G22280 34.043 188 109 5 7 187 1 180 3.05e-15 76.6
MsG0180003609.01.T01 AT1G69630 24.385 447 255 17 7 384 17 449 4.10e-15 77.0
MsG0180003609.01.T01 AT5G44940 26.276 392 251 16 8 383 5 374 5.68e-15 76.3
MsG0180003609.01.T01 AT1G32375 26.437 435 250 18 7 385 1 421 6.76e-15 76.3
MsG0180003609.01.T01 AT1G32375 26.437 435 250 18 7 385 1 421 6.76e-15 76.3
MsG0180003609.01.T01 AT5G56370 26.185 443 240 17 7 385 1 420 1.02e-14 75.5
MsG0180003609.01.T01 AT5G56370 26.185 443 240 17 7 385 1 420 1.02e-14 75.5
MsG0180003609.01.T01 AT5G56690 32.984 191 108 8 10 187 4 187 1.66e-14 75.1
MsG0180003609.01.T01 AT5G38590 26.464 427 235 12 7 375 1 406 1.71e-14 75.1
MsG0180003609.01.T01 AT5G62970 25.110 454 259 17 7 385 1 448 3.35e-14 74.3
MsG0180003609.01.T01 AT1G78750 30.256 195 118 7 7 188 17 206 3.77e-14 73.9
MsG0180003609.01.T01 AT1G78750 30.256 195 118 7 7 188 17 206 3.77e-14 73.9
MsG0180003609.01.T01 AT5G22660 32.804 189 106 6 8 187 13 189 5.20e-14 72.8
MsG0180003609.01.T01 AT4G09920 32.984 191 109 6 7 187 1 182 5.87e-14 72.4
MsG0180003609.01.T01 AT4G09920 32.984 191 109 6 7 187 1 182 5.87e-14 72.4
MsG0180003609.01.T01 AT4G09920 32.984 191 109 6 7 187 1 182 5.87e-14 72.4
MsG0180003609.01.T01 AT3G59170 26.992 389 181 16 3 292 2 386 7.17e-14 73.2
MsG0180003609.01.T01 AT1G06630 32.500 200 118 8 3 188 7 203 8.16e-14 72.0
MsG0180003609.01.T01 AT4G09920 32.984 191 109 6 7 187 1 182 8.21e-14 72.0
MsG0180003609.01.T01 AT4G09920 32.984 191 109 6 7 187 1 182 8.21e-14 72.0
MsG0180003609.01.T01 AT5G56410 31.905 210 105 11 7 187 1 201 8.29e-14 73.2
MsG0180003609.01.T01 AT1G06630 26.730 419 218 20 3 354 16 412 9.13e-14 72.8
MsG0180003609.01.T01 AT2G42730 23.947 451 261 18 8 383 5 448 9.80e-14 72.8
MsG0180003609.01.T01 AT1G06630 26.730 419 218 20 3 354 7 403 1.02e-13 72.4
MsG0180003609.01.T01 AT1G06630 26.730 419 218 20 3 354 7 403 1.02e-13 72.4
MsG0180003609.01.T01 AT1G06630 26.730 419 218 20 3 354 7 403 1.02e-13 72.4
MsG0180003609.01.T01 AT1G06630 26.730 419 218 20 3 354 7 403 1.02e-13 72.4
MsG0180003609.01.T01 AT5G53840 22.120 434 270 16 8 385 18 439 1.35e-13 72.4
MsG0180003609.01.T01 AT1G06630 32.500 200 118 8 3 188 7 203 1.80e-13 71.6
MsG0180003609.01.T01 AT1G06630 32.500 200 118 8 3 188 7 203 1.80e-13 71.6
MsG0180003609.01.T01 AT3G59160 26.031 388 189 16 3 295 8 392 1.91e-13 72.0
MsG0180003609.01.T01 AT5G22660 32.804 189 106 6 8 187 13 189 2.15e-13 71.6
MsG0180003609.01.T01 AT1G06630 32.500 200 118 8 3 188 7 203 2.36e-13 71.6
MsG0180003609.01.T01 AT3G58940 24.766 428 248 16 7 369 1 419 2.37e-13 72.0
MsG0180003609.01.T01 AT3G58940 24.766 428 248 16 7 369 1 419 2.37e-13 72.0
MsG0180003609.01.T01 AT5G60610 31.980 197 98 10 7 187 1 177 4.45e-13 70.5
MsG0180003609.01.T01 AT5G60610 31.980 197 98 10 7 187 1 177 4.45e-13 70.5
MsG0180003609.01.T01 AT4G14103 25.833 360 183 15 8 295 8 355 5.69e-13 70.5
MsG0180003609.01.T01 AT5G56370 35.484 186 105 8 7 185 1 178 6.28e-13 69.7
MsG0180003609.01.T01 AT3G26922 31.915 188 111 6 8 187 14 192 6.95e-13 69.3
MsG0180003609.01.T01 AT3G26922 31.915 188 111 6 8 187 14 192 6.95e-13 69.3
MsG0180003609.01.T01 AT4G14103 25.613 367 189 15 1 295 1 355 7.86e-13 69.7
MsG0180003609.01.T01 AT4G14103 25.613 367 189 15 1 295 1 355 7.86e-13 69.7
MsG0180003609.01.T01 AT4G13960 22.422 446 249 16 7 369 1 432 8.38e-13 70.1
MsG0180003609.01.T01 AT4G13960 22.422 446 249 16 7 369 1 432 8.38e-13 70.1
MsG0180003609.01.T01 AT1G66290 22.940 449 248 16 7 383 28 450 8.85e-13 69.7
MsG0180003609.01.T01 AT1G48400 33.333 222 125 10 8 215 10 222 9.29e-13 70.1
MsG0180003609.01.T01 AT5G44950 25.000 444 249 17 8 381 4 433 9.74e-13 69.7
MsG0180003609.01.T01 AT1G48400 33.333 222 125 10 8 215 10 222 1.37e-12 69.3
MsG0180003609.01.T01 AT3G03040 23.757 362 195 11 7 293 1 356 1.64e-12 68.9
MsG0180003609.01.T01 AT4G15060 28.139 231 133 9 1 216 19 231 2.40e-12 68.6
MsG0180003609.01.T01 AT1G55030 23.973 438 254 14 5 385 6 421 2.51e-12 68.6
MsG0180003609.01.T01 AT1G55030 23.973 438 254 14 5 385 16 431 2.63e-12 68.2
MsG0180003609.01.T01 AT5G44960 24.292 424 262 14 8 385 5 415 2.64e-12 68.2
MsG0180003609.01.T01 AT3G59000 31.844 179 100 8 7 168 1 174 3.35e-12 68.2
MsG0180003609.01.T01 AT4G00315 29.897 194 115 7 7 187 1 186 4.18e-12 67.8
MsG0180003609.01.T01 AT3G59210 24.658 365 196 12 3 295 2 359 4.73e-12 67.8
MsG0180003609.01.T01 AT3G59210 24.658 365 196 12 3 295 2 359 4.73e-12 67.8
MsG0180003609.01.T01 AT3G59210 24.658 365 196 12 3 295 2 359 4.73e-12 67.8
MsG0180003609.01.T01 AT3G59210 24.658 365 196 12 3 295 2 359 4.73e-12 67.8
MsG0180003609.01.T01 AT3G59210 24.658 365 196 12 3 295 2 359 4.73e-12 67.8
MsG0180003609.01.T01 AT3G49150 32.093 215 119 10 1 197 9 214 4.78e-12 67.8
MsG0180003609.01.T01 AT5G22720 30.612 196 111 5 5 187 20 203 5.29e-12 67.4
MsG0180003609.01.T01 AT1G16930 28.571 189 116 6 8 187 15 193 6.28e-12 67.4
MsG0180003609.01.T01 AT1G16930 28.571 189 116 6 8 187 15 193 6.28e-12 67.4
MsG0180003609.01.T01 AT1G16930 28.571 189 116 6 8 187 15 193 6.28e-12 67.4
MsG0180003609.01.T01 AT5G22700 32.642 193 101 9 8 187 43 219 7.03e-12 67.0
MsG0180003609.01.T01 AT5G22700 32.642 193 101 9 8 187 43 219 7.19e-12 67.0
MsG0180003609.01.T01 AT5G22700 32.642 193 101 9 8 187 6 182 7.30e-12 67.0
MsG0180003609.01.T01 AT5G22700 32.642 193 101 9 8 187 6 182 7.30e-12 67.0
MsG0180003609.01.T01 AT5G22700 32.642 193 101 9 8 187 6 182 7.30e-12 67.0
MsG0180003609.01.T01 AT5G22700 32.642 193 101 9 8 187 6 182 7.30e-12 67.0
MsG0180003609.01.T01 AT3G56780 27.957 186 115 7 10 187 9 183 7.72e-12 67.0
MsG0180003609.01.T01 AT5G44980 23.649 444 259 17 8 385 4 433 8.61e-12 66.6
MsG0180003609.01.T01 AT5G44980 23.649 444 259 17 8 385 4 433 8.61e-12 66.6
MsG0180003609.01.T01 AT4G15060 28.444 225 128 9 7 216 171 377 8.76e-12 67.0
MsG0180003609.01.T01 AT3G56780 27.957 186 115 7 10 187 9 183 1.21e-11 66.6
MsG0180003609.01.T01 AT5G38590 29.384 211 112 5 7 199 1 192 1.21e-11 65.5
MsG0180003609.01.T01 AT3G56780 27.957 186 115 7 10 187 9 183 1.33e-11 65.9
MsG0180003609.01.T01 AT3G44060 23.380 432 257 17 13 383 4 422 1.34e-11 66.2
MsG0180003609.01.T01 AT2G29930 29.897 194 123 6 3 191 7 192 1.84e-11 65.9
MsG0180003609.01.T01 AT2G29930 29.897 194 123 6 3 191 7 192 1.84e-11 65.9
MsG0180003609.01.T01 AT5G41630 31.683 202 108 8 8 187 12 205 2.85e-11 65.1
MsG0180003609.01.T01 AT3G58820 24.515 412 245 15 7 374 1 390 3.26e-11 65.1
MsG0180003609.01.T01 AT3G58980 23.965 459 247 18 7 383 1 439 3.69e-11 65.1
MsG0180003609.01.T01 AT5G22610 22.529 435 273 16 1 383 11 433 3.75e-11 65.1
MsG0180003609.01.T01 AT1G16940 21.831 426 257 18 10 384 13 413 3.92e-11 64.7
MsG0180003609.01.T01 AT5G44490 24.436 266 151 9 5 246 14 253 6.21e-11 64.3
MsG0180003609.01.T01 AT5G44490 24.436 266 151 9 5 246 14 253 6.41e-11 64.3
MsG0180003609.01.T01 AT3G58900 31.034 203 117 8 7 194 1 195 6.83e-11 63.5
MsG0180003609.01.T01 AT3G58900 31.034 203 117 8 7 194 1 195 6.83e-11 63.5
MsG0180003609.01.T01 AT3G58900 31.034 203 117 8 7 194 1 195 7.83e-11 63.2

Find 61 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTTGGATTTCCCAATTT+TGG 0.051977 1:-65191942 MsG0180003609.01.T01:CDS
ATCATTGTTCTTGTCTAAAT+TGG 0.185296 1:-65192319 MsG0180003609.01.T01:CDS
ACACATTCAAGACCCAAAAT+TGG 0.247546 1:+65191929 None:intergenic
CGCCAGCTTATCCAAGGATT+TGG 0.247556 1:-65191957 MsG0180003609.01.T01:CDS
AAAACGACACTTGAGGTAAA+AGG 0.257999 1:+65192683 None:intergenic
CATATTGAACTATGGTGTTT+TGG 0.296656 1:-65192150 MsG0180003609.01.T01:CDS
TTGAATTTCTACGTGTAGTT+AGG 0.310083 1:-65192245 MsG0180003609.01.T01:CDS
TTGCATCCTTGAGACATCTT+TGG 0.310641 1:+65191728 None:intergenic
ACTTAGTTCATATTGAACTA+TGG 0.345872 1:-65192158 MsG0180003609.01.T01:CDS
TTGAGACATCTTTGGACAAC+TGG 0.366559 1:+65191736 None:intergenic
ACATTATGAATTGCATTAAA+CGG 0.377775 1:+65192267 None:intergenic
ATGAAAAGAATTTGAAGCTT+GGG 0.380548 1:+65192081 None:intergenic
GTTTGAGAGGTGAAAATTGC+GGG 0.393326 1:+65192558 None:intergenic
TCTTCGCGTCTCATATATCT+AGG 0.415530 1:+65192366 None:intergenic
CACATTCAAGACCCAAAATT+GGG 0.433353 1:+65191930 None:intergenic
GTATGCAAATCTTCTAGATT+AGG 0.433782 1:+65192396 None:intergenic
ACAAAGTAACTTGTTTGATA+AGG 0.446252 1:+65192905 None:intergenic
ATCCAAATCCTTGGATAAGC+TGG 0.456447 1:+65191955 None:intergenic
AATGAAAAGAATTTGAAGCT+TGG 0.461500 1:+65192080 None:intergenic
TCAACATTCATCTGCAAAGA+AGG 0.462030 1:+65192213 None:intergenic
AATTGGGAAATCCAAATCCT+TGG 0.474030 1:+65191946 None:intergenic
GATTAGGACAAGCATTAAGA+AGG 0.479921 1:+65192412 None:intergenic
GGTCCAGCGGGTTGAAAGGA+CGG 0.496832 1:+65192839 None:intergenic
GCAGAATATACGTTGCAAAT+CGG 0.506559 1:+65191849 None:intergenic
TTTCAAGTTTCAAAACAACT+AGG 0.508154 1:+65192535 None:intergenic
TTCAAGTTTCAAAACAACTA+GGG 0.509655 1:+65192536 None:intergenic
GTGGTGAGAGAGTAGCAAAG+TGG 0.511799 1:+65192816 None:intergenic
TTTACAAGAAATGACAATTG+AGG 0.511987 1:-65191813 MsG0180003609.01.T01:CDS
TGGTGAGAGAGTAGCAAAGT+GGG 0.518408 1:+65192817 None:intergenic
CCACCGTCCTTTCAACCCGC+TGG 0.523953 1:-65192842 MsG0180003609.01.T01:CDS
ATCGTCGAAGCTTCGACGCA+TGG 0.524464 1:-65192644 MsG0180003609.01.T01:CDS
ATGGTGTAGTAGAATTGCTT+CGG 0.526817 1:-65192110 MsG0180003609.01.T01:CDS
CAAAACAACTAGGGTTTGAG+AGG 0.530804 1:+65192545 None:intergenic
GAGGGATTGGTTTGAGACGC+GGG 0.532253 1:+65192710 None:intergenic
AGTAGCAAAGTGGGGTCCAG+CGG 0.532494 1:+65192826 None:intergenic
GTGGGGTCCAGCGGGTTGAA+AGG 0.533471 1:+65192835 None:intergenic
TGATTCTGTCAACCGTAGCT+AGG 0.534919 1:+65192931 None:intergenic
TGACGGGTTCATCGTCGAAA+CGG 0.539712 1:+65192790 None:intergenic
GCGGGTTGAAAGGACGGTGG+TGG 0.545972 1:+65192845 None:intergenic
GTGGTGAAAGCTTGTTCGAT+CGG 0.555455 1:+65192864 None:intergenic
GTAGCAAAGTGGGGTCCAGC+GGG 0.556155 1:+65192827 None:intergenic
TCGTCGAAGCTTCGACGCAT+GGG 0.558719 1:-65192643 MsG0180003609.01.T01:CDS
AATGTGTTGAGTCTCACCTC+AGG 0.570177 1:-65191913 MsG0180003609.01.T01:CDS
CGCAATGGAGGACCTAGCTA+CGG 0.582593 1:-65192943 None:intergenic
AAATTGGTTAGAGCTGATGT+TGG 0.582778 1:-65192303 MsG0180003609.01.T01:CDS
CGATGAAACGACAGAAGCGA+CGG 0.583473 1:+65192751 None:intergenic
TGAGGGATTGGTTTGAGACG+CGG 0.602272 1:+65192709 None:intergenic
AGTTGTCCAAAGATGTCTCA+AGG 0.613020 1:-65191734 MsG0180003609.01.T01:CDS
GTGGAACGCCAGCTTATCCA+AGG 0.619943 1:-65191963 MsG0180003609.01.T01:CDS
AAATTGCGGGATTCAAAGTG+TGG 0.628877 1:+65192571 None:intergenic
CGGGTTCATCGTCGAAACGG+AGG 0.634792 1:+65192793 None:intergenic
AGCTGCTAAACAACGCTGCG+AGG 0.635763 1:-65192616 MsG0180003609.01.T01:CDS
AGGGATTGGTTTGAGACGCG+GGG 0.636322 1:+65192711 None:intergenic
TTAAAATAGTACATGACCTG+AGG 0.644877 1:+65191897 None:intergenic
TTCATCGTCGAAACGGAGGG+TGG 0.649266 1:+65192797 None:intergenic
GGGTTCATCGTCGAAACGGA+GGG 0.649330 1:+65192794 None:intergenic
GGTTTGAGAGGTGAAAATTG+CGG 0.658396 1:+65192557 None:intergenic
AAATTCCAAAACGACACTTG+AGG 0.685724 1:+65192676 None:intergenic
CCAGCGGGTTGAAAGGACGG+TGG 0.695101 1:+65192842 None:intergenic
AGACGCGAAGAGAATAACGA+AGG 0.705827 1:-65192354 MsG0180003609.01.T01:CDS
GGTGAGAGAGTAGCAAAGTG+GGG 0.719090 1:+65192818 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATATATAATTTATTTGA+TGG - Chr1:65192637-65192656 MsG0180003609.01.T01:CDS 10.0%
!!! GTACTATTTTAAATTTTGAA+GGG - Chr1:65192768-65192787 MsG0180003609.01.T01:CDS 15.0%
!!! TGTACTATTTTAAATTTTGA+AGG - Chr1:65192767-65192786 MsG0180003609.01.T01:CDS 15.0%
!! ACATTATGAATTGCATTAAA+CGG + Chr1:65192390-65192409 None:intergenic 20.0%
!!! TATTTTAAATTTTGAAGGGT+CGG - Chr1:65192772-65192791 MsG0180003609.01.T01:CDS 20.0%
!!! TCAAATTCTTTTCATTAGAA+AGG - Chr1:65192581-65192600 MsG0180003609.01.T01:CDS 20.0%
! ACTTAGTTCATATTGAACTA+TGG - Chr1:65192496-65192515 MsG0180003609.01.T01:CDS 25.0%
! ATCATTGTTCTTGTCTAAAT+TGG - Chr1:65192335-65192354 MsG0180003609.01.T01:CDS 25.0%
! TTTACAAGAAATGACAATTG+AGG - Chr1:65192841-65192860 MsG0180003609.01.T01:CDS 25.0%
!! AATGAAAAGAATTTGAAGCT+TGG + Chr1:65192577-65192596 None:intergenic 25.0%
!! ATGAAAAGAATTTGAAGCTT+GGG + Chr1:65192576-65192595 None:intergenic 25.0%
!! TTCAAGTTTCAAAACAACTA+GGG + Chr1:65192121-65192140 None:intergenic 25.0%
!!! AATGTTGATGAGATTTTCAA+AGG - Chr1:65192456-65192475 MsG0180003609.01.T01:CDS 25.0%
!!! ACAAAGTAACTTGTTTGATA+AGG + Chr1:65191752-65191771 None:intergenic 25.0%
!!! AGTTGTTTTGAAACTTGAAA+AGG - Chr1:65192122-65192141 MsG0180003609.01.T01:CDS 25.0%
!!! TTTCAAGTTTCAAAACAACT+AGG + Chr1:65192122-65192141 None:intergenic 25.0%
GTATGCAAATCTTCTAGATT+AGG + Chr1:65192261-65192280 None:intergenic 30.0%
TTAAAATAGTACATGACCTG+AGG + Chr1:65192760-65192779 None:intergenic 30.0%
TTGAATTTCTACGTGTAGTT+AGG - Chr1:65192409-65192428 MsG0180003609.01.T01:CDS 30.0%
! ATGCTTTTGCATTTCATTTG+AGG + Chr1:65192879-65192898 None:intergenic 30.0%
! CATATTGAACTATGGTGTTT+TGG - Chr1:65192504-65192523 MsG0180003609.01.T01:CDS 30.0%
! GATTTGGATTTCCCAATTTT+GGG - Chr1:65192713-65192732 MsG0180003609.01.T01:CDS 30.0%
!!! TGAACTAAGTTTTGAAACAC+CGG + Chr1:65192486-65192505 None:intergenic 30.0%
!!! TGGTGTTTTGGTTTTTTTCA+TGG - Chr1:65192516-65192535 MsG0180003609.01.T01:CDS 30.0%
!!! TTTTGGTTTTTTTCATGGCT+GGG - Chr1:65192521-65192540 MsG0180003609.01.T01:CDS 30.0%
AAAACGACACTTGAGGTAAA+AGG + Chr1:65191974-65191993 None:intergenic 35.0%
AAATTCCAAAACGACACTTG+AGG + Chr1:65191981-65192000 None:intergenic 35.0%
AAATTGGTTAGAGCTGATGT+TGG - Chr1:65192351-65192370 MsG0180003609.01.T01:CDS 35.0%
AATTGGGAAATCCAAATCCT+TGG + Chr1:65192711-65192730 None:intergenic 35.0%
ACACATTCAAGACCCAAAAT+TGG + Chr1:65192728-65192747 None:intergenic 35.0%
ATGGTGTAGTAGAATTGCTT+CGG - Chr1:65192544-65192563 MsG0180003609.01.T01:CDS 35.0%
CACATTCAAGACCCAAAATT+GGG + Chr1:65192727-65192746 None:intergenic 35.0%
GATTAGGACAAGCATTAAGA+AGG + Chr1:65192245-65192264 None:intergenic 35.0%
GCAGAATATACGTTGCAAAT+CGG + Chr1:65192808-65192827 None:intergenic 35.0%
TCAACATTCATCTGCAAAGA+AGG + Chr1:65192444-65192463 None:intergenic 35.0%
! ACTTGAGGTAAAAGGTTTTG+AGG + Chr1:65191966-65191985 None:intergenic 35.0%
! ATGTTTTATCCCTTTGACAG+TGG - Chr1:65192672-65192691 MsG0180003609.01.T01:CDS 35.0%
! GGATTTGGATTTCCCAATTT+TGG - Chr1:65192712-65192731 MsG0180003609.01.T01:CDS 35.0%
!! AAATGCAGTGTTTTAAGCGA+CGG + Chr1:65192183-65192202 None:intergenic 35.0%
!! CTTGAGGTAAAAGGTTTTGA+GGG + Chr1:65191965-65191984 None:intergenic 35.0%
!!! GTTTTGGTTTTTTTCATGGC+TGG - Chr1:65192520-65192539 MsG0180003609.01.T01:CDS 35.0%
!!! TGAGATTTTCAAAGGCATTC+CGG - Chr1:65192464-65192483 MsG0180003609.01.T01:CDS 35.0%
!!! TTTTACCTCAAGTGTCGTTT+TGG - Chr1:65191973-65191992 MsG0180003609.01.T01:intron 35.0%
AAATTGCGGGATTCAAAGTG+TGG + Chr1:65192086-65192105 None:intergenic 40.0%
AGTTGTCCAAAGATGTCTCA+AGG - Chr1:65192920-65192939 MsG0180003609.01.T01:CDS 40.0%
ATCCAAATCCTTGGATAAGC+TGG + Chr1:65192702-65192721 None:intergenic 40.0%
CAAAACAACTAGGGTTTGAG+AGG + Chr1:65192112-65192131 None:intergenic 40.0%
GGTTTGAGAGGTGAAAATTG+CGG + Chr1:65192100-65192119 None:intergenic 40.0%
GTTTGAGAGGTGAAAATTGC+GGG + Chr1:65192099-65192118 None:intergenic 40.0%
TCTTCGCGTCTCATATATCT+AGG + Chr1:65192291-65192310 None:intergenic 40.0%
TTGAGACATCTTTGGACAAC+TGG + Chr1:65192921-65192940 None:intergenic 40.0%
TTGCATCCTTGAGACATCTT+TGG + Chr1:65192929-65192948 None:intergenic 40.0%
! AACGCGTCATAGTTTTTGAC+GGG + Chr1:65191883-65191902 None:intergenic 40.0%
! GAACGCGTCATAGTTTTTGA+CGG + Chr1:65191884-65191903 None:intergenic 40.0%
!!! GGTAAAAGGTTTTGAGGGAT+TGG + Chr1:65191960-65191979 None:intergenic 40.0%
!!! TCGTTTTGGAATTTACGACG+AGG - Chr1:65191987-65192006 MsG0180003609.01.T01:intron 40.0%
AATGTGTTGAGTCTCACCTC+AGG - Chr1:65192741-65192760 MsG0180003609.01.T01:CDS 45.0%
AGACGCGAAGAGAATAACGA+AGG - Chr1:65192300-65192319 MsG0180003609.01.T01:CDS 45.0%
TGATTCTGTCAACCGTAGCT+AGG + Chr1:65191726-65191745 None:intergenic 45.0%
TGGTGAGAGAGTAGCAAAGT+GGG + Chr1:65191840-65191859 None:intergenic 45.0%
! GTGGTGAAAGCTTGTTCGAT+CGG + Chr1:65191793-65191812 None:intergenic 45.0%
!!! GGTTTTTTTCATGGCTGGGA+TGG - Chr1:65192525-65192544 MsG0180003609.01.T01:CDS 45.0%
CGATGAAACGACAGAAGCGA+CGG + Chr1:65191906-65191925 None:intergenic 50.0%
CGCCAGCTTATCCAAGGATT+TGG - Chr1:65192697-65192716 MsG0180003609.01.T01:CDS 50.0%
GGTGAGAGAGTAGCAAAGTG+GGG + Chr1:65191839-65191858 None:intergenic 50.0%
GTGGTGAGAGAGTAGCAAAG+TGG + Chr1:65191841-65191860 None:intergenic 50.0%
!! TGACGGGTTCATCGTCGAAA+CGG + Chr1:65191867-65191886 None:intergenic 50.0%
!! TGAGGGATTGGTTTGAGACG+CGG + Chr1:65191948-65191967 None:intergenic 50.0%
AGCTGCTAAACAACGCTGCG+AGG - Chr1:65192038-65192057 MsG0180003609.01.T01:intron 55.0%
AGCTGGCGTTCCACTGTCAA+AGG + Chr1:65192685-65192704 None:intergenic 55.0%
AGTAGCAAAGTGGGGTCCAG+CGG + Chr1:65191831-65191850 None:intergenic 55.0%
ATCGTCGAAGCTTCGACGCA+TGG - Chr1:65192010-65192029 MsG0180003609.01.T01:intron 55.0%
GCTGGCGTTCCACTGTCAAA+GGG + Chr1:65192684-65192703 None:intergenic 55.0%
GGGTTCATCGTCGAAACGGA+GGG + Chr1:65191863-65191882 None:intergenic 55.0%
GTGGAACGCCAGCTTATCCA+AGG - Chr1:65192691-65192710 MsG0180003609.01.T01:CDS 55.0%
TCGTCGAAGCTTCGACGCAT+GGG - Chr1:65192011-65192030 MsG0180003609.01.T01:intron 55.0%
TTCATCGTCGAAACGGAGGG+TGG + Chr1:65191860-65191879 None:intergenic 55.0%
!! AGGGATTGGTTTGAGACGCG+GGG + Chr1:65191946-65191965 None:intergenic 55.0%
!! GAGGGATTGGTTTGAGACGC+GGG + Chr1:65191947-65191966 None:intergenic 55.0%
CGGGTTCATCGTCGAAACGG+AGG + Chr1:65191864-65191883 None:intergenic 60.0%
GTAGCAAAGTGGGGTCCAGC+GGG + Chr1:65191830-65191849 None:intergenic 60.0%
!! GGTCCAGCGGGTTGAAAGGA+CGG + Chr1:65191818-65191837 None:intergenic 60.0%
CCACCGTCCTTTCAACCCGC+TGG - Chr1:65191812-65191831 MsG0180003609.01.T01:CDS 65.0%
! GCGGGTTGAAAGGACGGTGG+TGG + Chr1:65191812-65191831 None:intergenic 65.0%
!! CCAGCGGGTTGAAAGGACGG+TGG + Chr1:65191815-65191834 None:intergenic 65.0%
!! GTGGGGTCCAGCGGGTTGAA+AGG + Chr1:65191822-65191841 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 65191715 65192961 65191715 ID=MsG0180003609.01;Name=MsG0180003609.01
Chr1 mRNA 65191715 65192961 65191715 ID=MsG0180003609.01.T01;Parent=MsG0180003609.01;Name=MsG0180003609.01.T01;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|385
Chr1 exon 65192074 65192961 65192074 ID=MsG0180003609.01.T01:exon:4872;Parent=MsG0180003609.01.T01
Chr1 exon 65191715 65191984 65191715 ID=MsG0180003609.01.T01:exon:4871;Parent=MsG0180003609.01.T01
Chr1 CDS 65192074 65192961 65192074 ID=MsG0180003609.01.T01:cds;Parent=MsG0180003609.01.T01
Chr1 CDS 65191715 65191984 65191715 ID=MsG0180003609.01.T01:cds;Parent=MsG0180003609.01.T01
Gene Sequence

>MsG0180003609.01.T01

ATGGAGGACCTAGCTACGGTTGACAGAATCAGCGCCTTATCAAACAAGTTACTTTGTCGCATTCTATCTCTTCTGCCGATCGAACAAGCTTTCACCACCACCGTCCTTTCAACCCGCTGGACCCCACTTTGCTACTCTCTCACCACCCTCCGTTTCGACGATGAACCCGTCAAAAACTATGACGCGTTCCGTCGCTTCTGTCGTTTCATCGACACACTCATGCTCTCTCCCCGCGTCTCAAACCAATCCCTCAAAACCTTTTACCTCAAGTGTCGTTTTGGAATTTACGACGAGGATCGTCGAAGCTTCGACGCATGGGTCGAAGCTGCTAAACAACGCTGCGAGGAATTTCATCTTATCATGAATAACCACACTTTGAATCCCGCAATTTTCACCTCTCAAACCCTAGTTGTTTTGAAACTTGAAAAGGTTCAAGTTGAAACTGAAACTTTATGTGTTGATCTTCCGTCGCTTAAAACACTGCATTTGAAATATATTTGTTTTGAGAATCAGAATGATATAAAAAACCTTCTTAATGCTTGTCCTAATCTAGAAGATTTGCATACTTCTTATCCTAGATATATGAGACGCGAAGAGAATAACGAAGGAGAAGAATTTGAATCATTGTTCTTGTCTAAATTGGTTAGAGCTGATGTTGGTTCAATCGATGTTCCGTTTAATGCAATTCATAATGTTGAATTTCTACGTGTAGTTAGGATACAAGAGCCTTCTTTGCAGATGAATGTTGATGAGATTTTCAAAGGCATTCCGGTGTTTCAAAACTTAGTTCATATTGAACTATGGTGTTTTGGTTTTTTTCATGGCTGGGATGGTGTAGTAGAATTGCTTCGGAATTGTCCCAAGCTTCAAATTCTTTTCATTAGAAAGTGGAACGCCAGCTTATCCAAGGATTTGGATTTCCCAATTTTGGGTCTTGAATGTGTTGAGTCTCACCTCAGGTCATGTACTATTTTAAATTTTGAAGGGTCGGAAAATGATCTCCGATTTGCAACGTATATTCTGCAGAATGCGAGACTTTTACAAGAAATGACAATTGAGGTTACTACTAGCTCCTCAAATGAAATGCAAAAGCATCAAATAATAGAAGAACTATCCAGTTGTCCAAAGATGTCTCAAGGATGCAAACTTACATTTTGA
Protein sequence

>MsG0180003609.01.T01

MEDLATVDRISALSNKLLCRILSLLPIEQAFTTTVLSTRWTPLCYSLTTLRFDDEPVKNYDAFRRFCRFIDTLMLSPRVSNQSLKTFYLKCRFGIYDEDRRSFDAWVEAAKQRCEEFHLIMNNHTLNPAIFTSQTLVVLKLEKVQVETETLCVDLPSLKTLHLKYICFENQNDIKNLLNACPNLEDLHTSYPRYMRREENNEGEEFESLFLSKLVRADVGSIDVPFNAIHNVEFLRVVRIQEPSLQMNVDEIFKGIPVFQNLVHIELWCFGFFHGWDGVVELLRNCPKLQILFIRKWNASLSKDLDFPILGLECVESHLRSCTILNFEGSENDLRFATYILQNARLLQEMTIEVTTSSSNEMQKHQIIEELSSCPKMSQGCKLTF*