Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043567.01.T01 | AES61520.2 | 50 | 324 | 119 | 7 | 1 | 289 | 158 | 473 | 2.10E-86 | 276 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043567.01.T01 | A0A072VMR6 | 50.000 | 324 | 119 | 7 | 1 | 289 | 233 | 548 | 3.72e-86 | 277 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043567.01.T01 | MTR_1g085120 | 50.000 | 324 | 119 | 7 | 1 | 289 | 158 | 473 | 2.54e-90 | 276 |
MsG0880043567.01.T01 | MTR_1g085120 | 50.000 | 324 | 119 | 7 | 1 | 289 | 233 | 548 | 9.44e-90 | 277 |
MsG0880043567.01.T01 | MTR_4g039440 | 49.216 | 319 | 121 | 5 | 8 | 289 | 100 | 414 | 1.73e-83 | 257 |
MsG0880043567.01.T01 | MTR_6g022500 | 46.417 | 321 | 129 | 6 | 1 | 288 | 167 | 477 | 3.24e-81 | 253 |
MsG0880043567.01.T01 | MTR_7g055943 | 46.951 | 328 | 125 | 8 | 1 | 289 | 106 | 423 | 4.67e-78 | 244 |
MsG0880043567.01.T01 | MTR_6g011460 | 47.826 | 322 | 125 | 6 | 1 | 289 | 112 | 423 | 5.65e-78 | 243 |
MsG0880043567.01.T01 | MTR_6g044572 | 50.526 | 285 | 121 | 5 | 20 | 288 | 109 | 389 | 9.09e-76 | 237 |
MsG0880043567.01.T01 | MTR_6g044560 | 50.526 | 285 | 121 | 5 | 20 | 288 | 285 | 565 | 2.42e-73 | 235 |
MsG0880043567.01.T01 | MTR_6g022520 | 46.462 | 325 | 128 | 8 | 1 | 289 | 1 | 315 | 8.61e-70 | 219 |
MsG0880043567.01.T01 | MTR_1g066830 | 43.963 | 323 | 134 | 10 | 1 | 286 | 74 | 386 | 1.06e-68 | 218 |
MsG0880043567.01.T01 | MTR_1089s0010 | 46.417 | 321 | 127 | 10 | 1 | 289 | 74 | 381 | 1.16e-68 | 218 |
MsG0880043567.01.T01 | MTR_5g058100 | 45.988 | 324 | 128 | 12 | 1 | 289 | 75 | 386 | 3.59e-65 | 209 |
MsG0880043567.01.T01 | MTR_6g022360 | 44.561 | 285 | 119 | 5 | 37 | 286 | 127 | 407 | 8.88e-65 | 209 |
MsG0880043567.01.T01 | MTR_5g073420 | 43.125 | 320 | 130 | 11 | 1 | 286 | 78 | 379 | 1.41e-62 | 202 |
MsG0880043567.01.T01 | MTR_6g040270 | 43.987 | 316 | 136 | 8 | 1 | 285 | 74 | 379 | 2.67e-62 | 201 |
MsG0880043567.01.T01 | MTR_5g058000 | 42.633 | 319 | 136 | 8 | 1 | 288 | 74 | 376 | 1.60e-59 | 194 |
MsG0880043567.01.T01 | MTR_1g085120 | 46.977 | 215 | 86 | 5 | 1 | 192 | 245 | 454 | 4.04e-48 | 167 |
MsG0880043567.01.T01 | MTR_6g033095 | 45.000 | 180 | 72 | 2 | 72 | 251 | 32 | 184 | 2.98e-38 | 134 |
MsG0880043567.01.T01 | MTR_5g007410 | 35.514 | 321 | 153 | 12 | 1 | 279 | 92 | 400 | 1.80e-34 | 130 |
MsG0880043567.01.T01 | MTR_1g108820 | 37.966 | 295 | 125 | 13 | 39 | 285 | 100 | 384 | 2.05e-34 | 129 |
MsG0880043567.01.T01 | MTR_5g045170 | 35.640 | 289 | 144 | 10 | 36 | 286 | 106 | 390 | 1.11e-33 | 127 |
MsG0880043567.01.T01 | MTR_7g026500 | 34.337 | 332 | 155 | 13 | 2 | 287 | 81 | 395 | 1.18e-33 | 127 |
MsG0880043567.01.T01 | MTR_3g071850 | 34.347 | 329 | 155 | 12 | 1 | 283 | 92 | 405 | 4.00e-33 | 129 |
MsG0880043567.01.T01 | MTR_5g045510 | 35.806 | 310 | 161 | 10 | 1 | 287 | 78 | 372 | 4.98e-33 | 125 |
MsG0880043567.01.T01 | MTR_1g108800 | 35.374 | 294 | 135 | 8 | 34 | 287 | 64 | 342 | 2.07e-32 | 122 |
MsG0880043567.01.T01 | MTR_6g045333 | 34.663 | 326 | 164 | 10 | 1 | 286 | 129 | 445 | 2.68e-32 | 124 |
MsG0880043567.01.T01 | MTR_0009s0080 | 34.967 | 306 | 154 | 9 | 6 | 273 | 88 | 386 | 5.85e-32 | 123 |
MsG0880043567.01.T01 | MTR_5g033200 | 49.315 | 146 | 57 | 4 | 145 | 278 | 33 | 173 | 8.73e-31 | 114 |
MsG0880043567.01.T01 | MTR_5g031970 | 33.557 | 298 | 165 | 8 | 6 | 284 | 70 | 353 | 1.51e-30 | 117 |
MsG0880043567.01.T01 | MTR_5g061680 | 37.931 | 232 | 116 | 7 | 1 | 219 | 78 | 294 | 2.53e-30 | 116 |
MsG0880043567.01.T01 | MTR_5g076150 | 39.462 | 223 | 74 | 9 | 49 | 216 | 11 | 227 | 1.33e-29 | 112 |
MsG0880043567.01.T01 | MTR_5g039490 | 31.935 | 310 | 169 | 9 | 1 | 287 | 86 | 376 | 4.59e-29 | 114 |
MsG0880043567.01.T01 | MTR_3g095600 | 34.629 | 283 | 124 | 12 | 1 | 281 | 72 | 295 | 2.32e-28 | 110 |
MsG0880043567.01.T01 | MTR_2g036470 | 33.642 | 324 | 169 | 11 | 1 | 286 | 80 | 395 | 8.88e-28 | 111 |
MsG0880043567.01.T01 | MTR_5g073370 | 35.249 | 261 | 124 | 12 | 64 | 289 | 132 | 382 | 1.02e-26 | 108 |
MsG0880043567.01.T01 | MTR_5g039470 | 32.986 | 288 | 141 | 9 | 1 | 247 | 51 | 327 | 1.09e-26 | 107 |
MsG0880043567.01.T01 | MTR_1377s0010 | 49.219 | 128 | 49 | 3 | 143 | 258 | 11 | 134 | 1.15e-26 | 102 |
MsG0880043567.01.T01 | MTR_3g095630 | 43.836 | 146 | 63 | 5 | 143 | 276 | 36 | 174 | 3.03e-25 | 99.8 |
MsG0880043567.01.T01 | MTR_6g022410 | 53.763 | 93 | 40 | 1 | 194 | 286 | 17 | 106 | 3.45e-24 | 94.7 |
MsG0880043567.01.T01 | MTR_5g063950 | 30.314 | 287 | 157 | 9 | 35 | 284 | 79 | 359 | 8.01e-24 | 99.8 |
MsG0880043567.01.T01 | MTR_5g039450 | 29.102 | 323 | 151 | 11 | 1 | 284 | 72 | 355 | 2.60e-21 | 92.8 |
MsG0880043567.01.T01 | MTR_7g056287 | 32.753 | 287 | 146 | 11 | 34 | 286 | 98 | 371 | 1.24e-20 | 90.9 |
MsG0880043567.01.T01 | MTR_7g056277 | 32.404 | 287 | 147 | 9 | 34 | 286 | 354 | 627 | 2.73e-20 | 91.3 |
MsG0880043567.01.T01 | MTR_5g024060 | 37.576 | 165 | 83 | 4 | 130 | 280 | 43 | 201 | 5.60e-19 | 84.7 |
MsG0880043567.01.T01 | MTR_5g008950 | 28.682 | 258 | 139 | 7 | 70 | 292 | 123 | 370 | 6.34e-19 | 86.3 |
MsG0880043567.01.T01 | MTR_5g054920 | 35.417 | 192 | 87 | 8 | 112 | 271 | 7 | 193 | 1.40e-18 | 82.0 |
MsG0880043567.01.T01 | MTR_7g032380 | 29.430 | 316 | 160 | 14 | 1 | 286 | 73 | 355 | 1.52e-18 | 84.7 |
MsG0880043567.01.T01 | MTR_7g034120 | 30.196 | 255 | 125 | 8 | 70 | 288 | 72 | 309 | 1.83e-18 | 84.0 |
MsG0880043567.01.T01 | MTR_7g088260 | 29.520 | 271 | 151 | 9 | 50 | 286 | 197 | 461 | 2.09e-18 | 85.1 |
MsG0880043567.01.T01 | MTR_7g098480 | 31.128 | 257 | 126 | 8 | 69 | 286 | 144 | 388 | 7.16e-18 | 83.6 |
MsG0880043567.01.T01 | MTR_3g087260 | 28.315 | 279 | 156 | 9 | 46 | 286 | 184 | 456 | 7.67e-18 | 83.6 |
MsG0880043567.01.T01 | MTR_5g058350 | 49.451 | 91 | 45 | 1 | 38 | 127 | 79 | 169 | 6.42e-17 | 77.4 |
MsG0880043567.01.T01 | MTR_3g467400 | 28.102 | 274 | 131 | 9 | 41 | 278 | 122 | 365 | 6.98e-17 | 80.1 |
MsG0880043567.01.T01 | MTR_2g008320 | 27.451 | 306 | 163 | 10 | 33 | 290 | 136 | 430 | 3.04e-16 | 79.0 |
MsG0880043567.01.T01 | MTR_3g107100 | 31.034 | 261 | 131 | 8 | 69 | 285 | 141 | 396 | 4.12e-16 | 78.2 |
MsG0880043567.01.T01 | MTR_7g075820 | 29.825 | 228 | 116 | 8 | 90 | 285 | 177 | 392 | 4.38e-16 | 78.2 |
MsG0880043567.01.T01 | MTR_2g008310 | 29.845 | 258 | 134 | 9 | 69 | 290 | 128 | 374 | 5.17e-16 | 77.8 |
MsG0880043567.01.T01 | MTR_7g083740 | 29.915 | 234 | 120 | 7 | 88 | 286 | 142 | 366 | 5.31e-16 | 77.8 |
MsG0880043567.01.T01 | MTR_2g005990 | 28.333 | 300 | 150 | 11 | 38 | 285 | 107 | 393 | 1.51e-15 | 76.6 |
MsG0880043567.01.T01 | MTR_1g107385 | 28.571 | 266 | 132 | 11 | 64 | 285 | 170 | 421 | 7.17e-15 | 74.7 |
MsG0880043567.01.T01 | MTR_1g108820 | 35.938 | 192 | 78 | 9 | 39 | 192 | 100 | 284 | 7.30e-15 | 74.3 |
MsG0880043567.01.T01 | MTR_7g007340 | 28.727 | 275 | 135 | 10 | 58 | 289 | 99 | 355 | 1.07e-14 | 73.9 |
MsG0880043567.01.T01 | MTR_2g007400 | 28.358 | 268 | 125 | 11 | 69 | 287 | 154 | 403 | 1.72e-14 | 73.6 |
MsG0880043567.01.T01 | MTR_7g114710 | 27.070 | 314 | 183 | 11 | 8 | 286 | 61 | 363 | 2.60e-14 | 72.8 |
MsG0880043567.01.T01 | MTR_2g007090 | 30.876 | 217 | 121 | 8 | 88 | 286 | 88 | 293 | 3.05e-14 | 72.0 |
MsG0880043567.01.T01 | MTR_5g073340 | 32.365 | 241 | 104 | 12 | 28 | 220 | 71 | 300 | 4.33e-14 | 71.6 |
MsG0880043567.01.T01 | MTR_0543s0010 | 26.102 | 295 | 167 | 11 | 30 | 286 | 168 | 449 | 5.79e-14 | 72.0 |
MsG0880043567.01.T01 | MTR_3g099830 | 28.517 | 263 | 125 | 11 | 69 | 285 | 127 | 372 | 1.20e-13 | 70.9 |
MsG0880043567.01.T01 | MTR_5g008920 | 24.573 | 293 | 183 | 8 | 29 | 289 | 97 | 383 | 1.50e-13 | 70.5 |
MsG0880043567.01.T01 | MTR_7g033990 | 27.027 | 222 | 117 | 7 | 88 | 276 | 163 | 372 | 2.72e-13 | 70.1 |
MsG0880043567.01.T01 | MTR_3g105060 | 28.112 | 249 | 144 | 6 | 62 | 286 | 135 | 372 | 5.18e-13 | 68.9 |
MsG0880043567.01.T01 | MTR_7g056020 | 28.462 | 260 | 133 | 10 | 57 | 275 | 115 | 362 | 5.93e-13 | 69.3 |
MsG0880043567.01.T01 | MTR_7g033915 | 30.323 | 155 | 86 | 3 | 145 | 286 | 219 | 364 | 6.52e-13 | 68.6 |
MsG0880043567.01.T01 | MTR_5g073400 | 42.593 | 108 | 50 | 4 | 38 | 139 | 26 | 127 | 7.79e-13 | 65.1 |
MsG0880043567.01.T01 | MTR_5g044790 | 46.429 | 84 | 38 | 2 | 203 | 284 | 359 | 437 | 1.12e-12 | 68.2 |
MsG0880043567.01.T01 | MTR_0492s0020 | 27.160 | 243 | 133 | 9 | 46 | 252 | 184 | 418 | 3.17e-12 | 67.0 |
MsG0880043567.01.T01 | MTR_7g022105 | 28.322 | 286 | 149 | 9 | 32 | 272 | 137 | 411 | 1.14e-11 | 65.1 |
MsG0880043567.01.T01 | MTR_5g012840 | 28.692 | 237 | 112 | 10 | 49 | 265 | 97 | 296 | 1.28e-11 | 64.7 |
MsG0880043567.01.T01 | MTR_6g029350 | 30.476 | 210 | 94 | 9 | 112 | 285 | 3 | 196 | 2.40e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 42 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTACATCTTGAAGATATTAT+TGG | 0.212861 | 8:+26905725 | None:intergenic |
ACACATTCAAGAACCGAAAT+TGG | 0.215106 | 8:+26905932 | None:intergenic |
GTCTTGGCTCGTTTCATTGC+TGG | 0.217875 | 8:-26906221 | MsG0880043567.01.T01:CDS |
CGTCGCATCTGTTGGTTTGA+TGG | 0.249484 | 8:-26907484 | MsG0880043567.01.T01:CDS |
TTTCATTTCCAACATATAAA+TGG | 0.295098 | 8:+26907302 | None:intergenic |
ATTGATCTATTGTTTGGTCT+TGG | 0.330875 | 8:-26906237 | MsG0880043567.01.T01:CDS |
ATTCATATTGATCTATTGTT+TGG | 0.338203 | 8:-26906243 | MsG0880043567.01.T01:CDS |
GGAATGGAAGTGCCCAATTT+CGG | 0.393283 | 8:-26905945 | MsG0880043567.01.T01:CDS |
TCATGTTTCTCATAATAGAT+AGG | 0.400171 | 8:+26907157 | None:intergenic |
TCTTGGCTCGTTTCATTGCT+GGG | 0.403637 | 8:-26906220 | MsG0880043567.01.T01:CDS |
TTCAACACGACGTAGCTTTG+CGG | 0.417285 | 8:+26907405 | None:intergenic |
TCAAGATGTAAACTTTCATT+CGG | 0.426534 | 8:-26905713 | MsG0880043567.01.T01:CDS |
GGGCACTTCCATTCCTTCGA+TGG | 0.434341 | 8:+26905953 | None:intergenic |
GGCTCGTTTCATTGCTGGGA+TGG | 0.434883 | 8:-26906216 | MsG0880043567.01.T01:CDS |
CTTCCATTCCTTCGATGGGC+CGG | 0.438787 | 8:+26905958 | None:intergenic |
AAACTTGACCATTTATATGT+TGG | 0.439864 | 8:-26907310 | MsG0880043567.01.T01:CDS |
GTAAAATAGTACATGATTTG+AGG | 0.440754 | 8:+26905900 | None:intergenic |
GGCACTTCCATTCCTTCGAT+GGG | 0.450347 | 8:+26905954 | None:intergenic |
CACATTCAAGAACCGAAATT+GGG | 0.454109 | 8:+26905933 | None:intergenic |
GAGAAGAAAGGTTTAAACTA+AGG | 0.454906 | 8:-26907120 | MsG0880043567.01.T01:CDS |
TGGTGTTGTTAGTATTGAAA+AGG | 0.480977 | 8:-26906196 | MsG0880043567.01.T01:intron |
AATAAACTGATGTCAAATGC+AGG | 0.491158 | 8:+26907248 | None:intergenic |
CTTTGACAGTGGAGGAAGAC+CGG | 0.504077 | 8:-26905977 | MsG0880043567.01.T01:intron |
GGTCAAGTTTGAGAATAACT+AGG | 0.506189 | 8:+26907323 | None:intergenic |
AACATGCAAATCCTCTAGGT+TGG | 0.509162 | 8:+26907183 | None:intergenic |
ACATGCAAATCCTCTAGGTT+GGG | 0.514316 | 8:+26907184 | None:intergenic |
AAAACAATGCACGAGAAGAA+AGG | 0.522398 | 8:-26907132 | MsG0880043567.01.T01:CDS |
AGACCGGCCCATCGAAGGAA+TGG | 0.526549 | 8:-26905961 | MsG0880043567.01.T01:CDS |
CAAAAGATCCACCGAGCAAG+AGG | 0.527272 | 8:-26906301 | MsG0880043567.01.T01:CDS |
AGTTTGAGAATAACTAGGGT+TGG | 0.528200 | 8:+26907328 | None:intergenic |
GTCAAGTTTGAGAATAACTA+GGG | 0.530461 | 8:+26907324 | None:intergenic |
TTTGAAAGAATCCTCTTGCT+CGG | 0.539331 | 8:+26906290 | None:intergenic |
AGAAGAAAGGTTTAAACTAA+GGG | 0.546592 | 8:-26907119 | MsG0880043567.01.T01:intron |
TGAAGATATTATTGGACAAG+AGG | 0.547401 | 8:+26905733 | None:intergenic |
TTCTGTTTGTCCCAACCTAG+AGG | 0.561031 | 8:-26907194 | MsG0880043567.01.T01:CDS |
GATGAACATGCAAATCCTCT+AGG | 0.565891 | 8:+26907179 | None:intergenic |
TCTCTCTGTATTGCCACACT+TGG | 0.566537 | 8:-26907372 | MsG0880043567.01.T01:CDS |
GAGGAAGACCGGCCCATCGA+AGG | 0.574198 | 8:-26905966 | MsG0880043567.01.T01:CDS |
AAATAATAGGCTTCCAAGTG+TGG | 0.574375 | 8:+26907359 | None:intergenic |
ATAAACTGATGTCAAATGCA+GGG | 0.610022 | 8:+26907249 | None:intergenic |
GAAAGAATCCTCTTGCTCGG+TGG | 0.617441 | 8:+26906293 | None:intergenic |
CTTTGCGGCTTCAATCCATG+AGG | 0.721650 | 8:+26907420 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATTTAATTAGTATATTG+CGG | + | Chr8:26906291-26906310 | None:intergenic | 10.0% |
!!! | TTTATGATTTAACTTTATAA+TGG | - | Chr8:26907155-26907174 | MsG0880043567.01.T01:CDS | 10.0% |
!!! | TTTTAATTTGATTTTAATGT+TGG | - | Chr8:26906612-26906631 | MsG0880043567.01.T01:intron | 10.0% |
!! | CTAATTAAATATATATCACT+TGG | - | Chr8:26906298-26906317 | MsG0880043567.01.T01:CDS | 15.0% |
!! | TGAAAATAAAATTGTAATGT+TGG | - | Chr8:26906548-26906567 | MsG0880043567.01.T01:intron | 15.0% |
!!! | AATAAAACAGTTTTAGAAAA+AGG | - | Chr8:26907447-26907466 | MsG0880043567.01.T01:CDS | 15.0% |
!!! | ATTGTTTATTAGTATTGAAA+AGG | - | Chr8:26907055-26907074 | MsG0880043567.01.T01:intron | 15.0% |
!!! | TTAGAGAATGATAAATTTTT+TGG | - | Chr8:26906434-26906453 | MsG0880043567.01.T01:intron | 15.0% |
!!! | TTTTGCATTTATTACAAAAT+AGG | - | Chr8:26906459-26906478 | MsG0880043567.01.T01:intron | 15.0% |
!! | AAATAAATAAGTATGCAGTT+TGG | + | Chr8:26906748-26906767 | None:intergenic | 20.0% |
!! | ATTCATATTGATCTATTGTT+TGG | - | Chr8:26906980-26906999 | MsG0880043567.01.T01:intron | 20.0% |
!! | CCAAATTCTTTATATTGAAA+AGG | - | Chr8:26907086-26907105 | MsG0880043567.01.T01:intron | 20.0% |
!! | GTTGGAAAAAGAAAAATAAT+AGG | + | Chr8:26905880-26905899 | None:intergenic | 20.0% |
!! | TTACATCTTGAAGATATTAT+TGG | + | Chr8:26907501-26907520 | None:intergenic | 20.0% |
!! | TTTAGAAAAAGGTAAGATTA+TGG | - | Chr8:26907458-26907477 | MsG0880043567.01.T01:CDS | 20.0% |
!! | TTTCATTTCCAACATATAAA+TGG | + | Chr8:26905924-26905943 | None:intergenic | 20.0% |
!!! | CCTTTTCAATATAAAGAATT+TGG | + | Chr8:26907089-26907108 | None:intergenic | 20.0% |
!!! | TTCTAAAACTGTTTTATTTG+AGG | + | Chr8:26907445-26907464 | None:intergenic | 20.0% |
!!! | TTTTTGTTTGCGTTTAAATT+TGG | - | Chr8:26906487-26906506 | MsG0880043567.01.T01:intron | 20.0% |
! | AAACTTGACCATTTATATGT+TGG | - | Chr8:26905913-26905932 | MsG0880043567.01.T01:CDS | 25.0% |
! | AGAAGAAAGGTTTAAACTAA+GGG | - | Chr8:26906104-26906123 | MsG0880043567.01.T01:intron | 25.0% |
! | GTAAAATAGTACATGATTTG+AGG | + | Chr8:26907326-26907345 | None:intergenic | 25.0% |
! | TCAAGATGTAAACTTTCATT+CGG | - | Chr8:26907510-26907529 | MsG0880043567.01.T01:CDS | 25.0% |
! | TCATGTTTCTCATAATAGAT+AGG | + | Chr8:26906069-26906088 | None:intergenic | 25.0% |
! | TTAATTAGTATATTGCGGTT+TGG | + | Chr8:26906286-26906305 | None:intergenic | 25.0% |
!! | TATTAGTATTGAAAAGGTCT+TGG | - | Chr8:26907061-26907080 | MsG0880043567.01.T01:intron | 25.0% |
!! | TATTTTACACTTAGATGGAT+CGG | - | Chr8:26907338-26907357 | MsG0880043567.01.T01:CDS | 25.0% |
!! | TGTACTATTTTACACTTAGA+TGG | - | Chr8:26907333-26907352 | MsG0880043567.01.T01:CDS | 25.0% |
!! | TTGTTAGTATTGAAAAGGTT+TGG | - | Chr8:26907032-26907051 | MsG0880043567.01.T01:intron | 25.0% |
!!! | CTGCATACTTATTTATTTTG+CGG | - | Chr8:26906750-26906769 | MsG0880043567.01.T01:intron | 25.0% |
!!! | TACTTATTTATTTTGCGGTT+TGG | - | Chr8:26906755-26906774 | MsG0880043567.01.T01:intron | 25.0% |
AATAAACTGATGTCAAATGC+AGG | + | Chr8:26905978-26905997 | None:intergenic | 30.0% | |
AATAAGTATGCAGTTTGGTT+TGG | + | Chr8:26906743-26906762 | None:intergenic | 30.0% | |
ATAAACTGATGTCAAATGCA+GGG | + | Chr8:26905977-26905996 | None:intergenic | 30.0% | |
ATTGATCTATTGTTTGGTCT+TGG | - | Chr8:26906986-26907005 | MsG0880043567.01.T01:intron | 30.0% | |
CAATACTCATAGAAACTCAA+TGG | - | Chr8:26906323-26906342 | MsG0880043567.01.T01:CDS | 30.0% | |
CATTGAGTTTCTATGAGTAT+TGG | + | Chr8:26906325-26906344 | None:intergenic | 30.0% | |
GAGAAGAAAGGTTTAAACTA+AGG | - | Chr8:26906103-26906122 | MsG0880043567.01.T01:intron | 30.0% | |
GTCAAGTTTGAGAATAACTA+GGG | + | Chr8:26905902-26905921 | None:intergenic | 30.0% | |
TAAAGCGAGTATCAATTCAA+TGG | - | Chr8:26906853-26906872 | MsG0880043567.01.T01:intron | 30.0% | |
TAAATTTGGTCTACGTAGTT+GGG | - | Chr8:26906501-26906520 | MsG0880043567.01.T01:intron | 30.0% | |
TGAAGATATTATTGGACAAG+AGG | + | Chr8:26907493-26907512 | None:intergenic | 30.0% | |
TTAAATTTGGTCTACGTAGT+TGG | - | Chr8:26906500-26906519 | MsG0880043567.01.T01:intron | 30.0% | |
!! | TGGTGTTGTTAGTATTGAAA+AGG | - | Chr8:26907027-26907046 | MsG0880043567.01.T01:intron | 30.0% |
!!! | AAAAGTTTTGAGGGTTTTGT+TGG | + | Chr8:26905719-26905738 | None:intergenic | 30.0% |
!!! | CAATTTTTTACCAAACCACA+TGG | - | Chr8:26906223-26906242 | MsG0880043567.01.T01:CDS | 30.0% |
!!! | GTTTTTCTATTGGATTGGTT+CGG | + | Chr8:26906139-26906158 | None:intergenic | 30.0% |
AAAACAATGCACGAGAAGAA+AGG | - | Chr8:26906091-26906110 | MsG0880043567.01.T01:intron | 35.0% | |
AAATAATAGGCTTCCAAGTG+TGG | + | Chr8:26905867-26905886 | None:intergenic | 35.0% | |
AACATTGTTGGGAACATTGT+TGG | - | Chr8:26906524-26906543 | MsG0880043567.01.T01:intron | 35.0% | |
ACACATTCAAGAACCGAAAT+TGG | + | Chr8:26907294-26907313 | None:intergenic | 35.0% | |
AGTTTGAGAATAACTAGGGT+TGG | + | Chr8:26905898-26905917 | None:intergenic | 35.0% | |
CACATTCAAGAACCGAAATT+GGG | + | Chr8:26907293-26907312 | None:intergenic | 35.0% | |
CGCTTTAACCAATTTAGACA+GGG | + | Chr8:26906840-26906859 | None:intergenic | 35.0% | |
GAATATATCCGAACCAAATG+CGG | + | Chr8:26906199-26906218 | None:intergenic | 35.0% | |
GGTCAAGTTTGAGAATAACT+AGG | + | Chr8:26905903-26905922 | None:intergenic | 35.0% | |
TCGCTTTAACCAATTTAGAC+AGG | + | Chr8:26906841-26906860 | None:intergenic | 35.0% | |
TTTGAAAGAATCCTCTTGCT+CGG | + | Chr8:26906936-26906955 | None:intergenic | 35.0% | |
! | TCAGTTTGCGGTTTTTCTAT+TGG | + | Chr8:26906149-26906168 | None:intergenic | 35.0% |
! | TTGCGGTTTTTCTATTGGAT+TGG | + | Chr8:26906144-26906163 | None:intergenic | 35.0% |
! | TTTTACCAAACCACATGGTT+TGG | - | Chr8:26906228-26906247 | MsG0880043567.01.T01:CDS | 35.0% |
!! | GCATTTGGTTCGGATATATT+CGG | - | Chr8:26906198-26906217 | MsG0880043567.01.T01:CDS | 35.0% |
!! | GTTTTGTTGGTTGAATATCG+AGG | + | Chr8:26905706-26905725 | None:intergenic | 35.0% |
!! | TAGTATATTGCGGTTTGGTT+CGG | + | Chr8:26906281-26906300 | None:intergenic | 35.0% |
AAACCGCAAAAAACCGCATT+TGG | - | Chr8:26906183-26906202 | MsG0880043567.01.T01:intron | 40.0% | |
AACATGCAAATCCTCTAGGT+TGG | + | Chr8:26906043-26906062 | None:intergenic | 40.0% | |
AACCAATTTAGACAGGGTCA+AGG | + | Chr8:26906834-26906853 | None:intergenic | 40.0% | |
ACATGCAAATCCTCTAGGTT+GGG | + | Chr8:26906042-26906061 | None:intergenic | 40.0% | |
ACCAATTTAGACAGGGTCAA+GGG | + | Chr8:26906833-26906852 | None:intergenic | 40.0% | |
ACGTAGTTGGGAACATTGTT+GGG | - | Chr8:26906513-26906532 | MsG0880043567.01.T01:intron | 40.0% | |
CAAACCAAACCAAACCAATG+CGG | + | Chr8:26906690-26906709 | None:intergenic | 40.0% | |
GATGAACATGCAAATCCTCT+AGG | + | Chr8:26906047-26906066 | None:intergenic | 40.0% | |
GCAAAAAACCGCATTTGGTT+CGG | - | Chr8:26906188-26906207 | MsG0880043567.01.T01:intron | 40.0% | |
GCGAGTATCAATTCAATGGA+CGG | - | Chr8:26906857-26906876 | MsG0880043567.01.T01:intron | 40.0% | |
GTAGTTAGCGAGATAAGACT+TGG | - | Chr8:26907180-26907199 | MsG0880043567.01.T01:CDS | 40.0% | |
TACGTAGTTGGGAACATTGT+TGG | - | Chr8:26906512-26906531 | MsG0880043567.01.T01:intron | 40.0% | |
! | AAACTTTTCGTCGCATCTGT+TGG | - | Chr8:26905731-26905750 | MsG0880043567.01.T01:CDS | 40.0% |
! | AGATGCGACGAAAAGTTTTG+AGG | + | Chr8:26905729-26905748 | None:intergenic | 40.0% |
! | ATTTTTGACCCCTTTGACAG+TGG | - | Chr8:26907235-26907254 | MsG0880043567.01.T01:CDS | 40.0% |
!! | ACATGGTTTGGTTTGGTTTG+CGG | - | Chr8:26906240-26906259 | MsG0880043567.01.T01:CDS | 40.0% |
!! | GATGCGACGAAAAGTTTTGA+GGG | + | Chr8:26905728-26905747 | None:intergenic | 40.0% |
!! | GTATGCAGTTTGGTTTGGTT+CGG | + | Chr8:26906738-26906757 | None:intergenic | 40.0% |
!! | GTTTGGATTGGTTCAGTTTG+CGG | + | Chr8:26906161-26906180 | None:intergenic | 40.0% |
!!! | AAATGCAGGGTTTTGAGTGA+TGG | + | Chr8:26905964-26905983 | None:intergenic | 40.0% |
!!! | AATGCGGTTTTTTGCGGTTT+CGG | + | Chr8:26906183-26906202 | None:intergenic | 40.0% |
!!! | GAACCAAATGCGGTTTTTTG+CGG | + | Chr8:26906189-26906208 | None:intergenic | 40.0% |
ACCCTTGACCCTGTCTAAAT+TGG | - | Chr8:26906829-26906848 | MsG0880043567.01.T01:intron | 45.0% | |
CAAACCAAACCAATGCGGTT+TGG | + | Chr8:26906685-26906704 | None:intergenic | 45.0% | |
CCAAACCAAACCATGTGGTT+TGG | + | Chr8:26906236-26906255 | None:intergenic | 45.0% | |
GCAAACCAAACCAAACCATG+TGG | + | Chr8:26906241-26906260 | None:intergenic | 45.0% | |
TCTCTCTGTATTGCCACACT+TGG | - | Chr8:26905851-26905870 | MsG0880043567.01.T01:CDS | 45.0% | |
TTCTGTTTGTCCCAACCTAG+AGG | - | Chr8:26906029-26906048 | MsG0880043567.01.T01:intron | 45.0% | |
! | CAAACCAATGCGGTTTGGAT+TGG | + | Chr8:26906680-26906699 | None:intergenic | 45.0% |
! | CAATGCGGTTTGGATTGGAT+CGG | + | Chr8:26906675-26906694 | None:intergenic | 45.0% |
! | TCATCGAACGTTTTGCCTCA+TGG | - | Chr8:26905788-26905807 | MsG0880043567.01.T01:CDS | 45.0% |
! | TCTTGGCTCGTTTCATTGCT+GGG | - | Chr8:26907003-26907022 | MsG0880043567.01.T01:intron | 45.0% |
! | TTCAACACGACGTAGCTTTG+CGG | + | Chr8:26905821-26905840 | None:intergenic | 45.0% |
! | TTGGATTGGATCGGTTGGTA+CGG | + | Chr8:26906666-26906685 | None:intergenic | 45.0% |
!! | AGACAGGGTCAAGGGTATTA+GGG | + | Chr8:26906825-26906844 | None:intergenic | 45.0% |
!! | ATATTGCGGTTTGGTTCGGT+TGG | + | Chr8:26906277-26906296 | None:intergenic | 45.0% |
!! | CAAACCGCATTGGTTTGGTT+TGG | - | Chr8:26906683-26906702 | MsG0880043567.01.T01:intron | 45.0% |
!! | CAATCCAAACCGCATTGGTT+TGG | - | Chr8:26906678-26906697 | MsG0880043567.01.T01:intron | 45.0% |
!! | CCAAACCACATGGTTTGGTT+TGG | - | Chr8:26906233-26906252 | MsG0880043567.01.T01:CDS | 45.0% |
!! | CGCATTGGTTTGGTTTGGTT+TGG | - | Chr8:26906688-26906707 | MsG0880043567.01.T01:intron | 45.0% |
!! | GGAATGGAAGTGCCCAATTT+CGG | - | Chr8:26907278-26907297 | MsG0880043567.01.T01:CDS | 45.0% |
!! | TAGACAGGGTCAAGGGTATT+AGG | + | Chr8:26906826-26906845 | None:intergenic | 45.0% |
!! | TTTGCGGTTTCGGTTTGGAT+TGG | + | Chr8:26906173-26906192 | None:intergenic | 45.0% |
!!! | GGTTTTTTGCGGTTTCGGTT+TGG | + | Chr8:26906178-26906197 | None:intergenic | 45.0% |
CAAAAGATCCACCGAGCAAG+AGG | - | Chr8:26906922-26906941 | MsG0880043567.01.T01:intron | 50.0% | |
CGATCCAATCCAAACCGCAT+TGG | - | Chr8:26906673-26906692 | MsG0880043567.01.T01:intron | 50.0% | |
CTTTGACAGTGGAGGAAGAC+CGG | - | Chr8:26907246-26907265 | MsG0880043567.01.T01:CDS | 50.0% | |
CTTTGCGGCTTCAATCCATG+AGG | + | Chr8:26905806-26905825 | None:intergenic | 50.0% | |
GAAAGAATCCTCTTGCTCGG+TGG | + | Chr8:26906933-26906952 | None:intergenic | 50.0% | |
GGCACTTCCATTCCTTCGAT+GGG | + | Chr8:26907272-26907291 | None:intergenic | 50.0% | |
GGTCTTCCTCCACTGTCAAA+GGG | + | Chr8:26907247-26907266 | None:intergenic | 50.0% | |
GTCTTCCTCCACTGTCAAAG+GGG | + | Chr8:26907246-26907265 | None:intergenic | 50.0% | |
TTTGACCCCTTTGACAGTGG+AGG | - | Chr8:26907238-26907257 | MsG0880043567.01.T01:CDS | 50.0% | |
! | GTCTTGGCTCGTTTCATTGC+TGG | - | Chr8:26907002-26907021 | MsG0880043567.01.T01:intron | 50.0% |
!! | CGTCGCATCTGTTGGTTTGA+TGG | - | Chr8:26905739-26905758 | MsG0880043567.01.T01:CDS | 50.0% |
!! | GACAGGGTCAAGGGTATTAG+GGG | + | Chr8:26906824-26906843 | None:intergenic | 50.0% |
!!! | TGCGGTTTGGTTCGGTTTTG+AGG | + | Chr8:26906792-26906811 | None:intergenic | 50.0% |
CGGTCTTCCTCCACTGTCAA+AGG | + | Chr8:26907248-26907267 | None:intergenic | 55.0% | |
CTTCCATTCCTTCGATGGGC+CGG | + | Chr8:26907268-26907287 | None:intergenic | 55.0% | |
GGCTCGTTTCATTGCTGGGA+TGG | - | Chr8:26907007-26907026 | MsG0880043567.01.T01:intron | 55.0% | |
GGGCACTTCCATTCCTTCGA+TGG | + | Chr8:26907273-26907292 | None:intergenic | 55.0% | |
! | GCGGTTTGGATTGGATCGGT+TGG | + | Chr8:26906671-26906690 | None:intergenic | 55.0% |
!! | AAGGGTATTAGGGGTGTCCG+CGG | + | Chr8:26906815-26906834 | None:intergenic | 55.0% |
AACCGAACCAAACCGCACCG+CGG | - | Chr8:26906795-26906814 | MsG0880043567.01.T01:intron | 60.0% | |
AGACCGGCCCATCGAAGGAA+TGG | - | Chr8:26907262-26907281 | MsG0880043567.01.T01:CDS | 60.0% | |
!! | TATTAGGGGTGTCCGCGGTG+CGG | + | Chr8:26906810-26906829 | None:intergenic | 60.0% |
GAGGAAGACCGGCCCATCGA+AGG | - | Chr8:26907257-26907276 | MsG0880043567.01.T01:CDS | 65.0% | |
!! | GTCCGCGGTGCGGTTTGGTT+CGG | + | Chr8:26906800-26906819 | None:intergenic | 65.0% |
! | GGGGTGTCCGCGGTGCGGTT+TGG | + | Chr8:26906805-26906824 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 26905694 | 26907551 | 26905694 | ID=MsG0880043567.01;Name=MsG0880043567.01 |
Chr8 | mRNA | 26905694 | 26907551 | 26905694 | ID=MsG0880043567.01.T01;Parent=MsG0880043567.01;Name=MsG0880043567.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|3|0|292 |
Chr8 | exon | 26907120 | 26907551 | 26907120 | ID=MsG0880043567.01.T01:exon:14591;Parent=MsG0880043567.01.T01 |
Chr8 | exon | 26906197 | 26906346 | 26906197 | ID=MsG0880043567.01.T01:exon:14590;Parent=MsG0880043567.01.T01 |
Chr8 | exon | 26905694 | 26905990 | 26905694 | ID=MsG0880043567.01.T01:exon:14589;Parent=MsG0880043567.01.T01 |
Chr8 | CDS | 26907120 | 26907551 | 26907120 | ID=MsG0880043567.01.T01:cds;Parent=MsG0880043567.01.T01 |
Chr8 | CDS | 26906197 | 26906346 | 26906197 | ID=MsG0880043567.01.T01:cds;Parent=MsG0880043567.01.T01 |
Chr8 | CDS | 26905694 | 26905990 | 26905694 | ID=MsG0880043567.01.T01:cds;Parent=MsG0880043567.01.T01 |
Gene Sequence |
Protein sequence |