Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026611.01.T01 | AES98164.1 | 71.204 | 382 | 68 | 6 | 1 | 378 | 1 | 344 | 2.61E-179 | 515 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026611.01.T01 | Q9FM89 | 25.995 | 427 | 250 | 13 | 9 | 381 | 6 | 420 | 1.08E-22 | 102 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026611.01.T01 | G7KBC9 | 71.204 | 382 | 68 | 6 | 1 | 378 | 1 | 344 | 1.25e-179 | 515 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026611.01.T01 | MTR_5g065100 | 71.204 | 382 | 68 | 6 | 1 | 378 | 1 | 344 | 0.0 | 515 |
MsG0580026611.01.T01 | MTR_5g063950 | 66.491 | 379 | 101 | 5 | 8 | 383 | 7 | 362 | 1.50e-162 | 460 |
MsG0580026611.01.T01 | MTR_5g061410 | 65.505 | 287 | 75 | 3 | 7 | 290 | 3 | 268 | 2.48e-119 | 347 |
MsG0580026611.01.T01 | MTR_6g045333 | 46.212 | 396 | 176 | 10 | 9 | 380 | 61 | 443 | 4.34e-99 | 301 |
MsG0580026611.01.T01 | MTR_5g045510 | 46.787 | 389 | 179 | 8 | 1 | 382 | 4 | 371 | 1.82e-98 | 298 |
MsG0580026611.01.T01 | MTR_5g007410 | 46.335 | 382 | 191 | 5 | 11 | 381 | 28 | 406 | 8.92e-97 | 296 |
MsG0580026611.01.T01 | MTR_2g036470 | 44.051 | 395 | 193 | 9 | 6 | 382 | 11 | 395 | 7.98e-90 | 276 |
MsG0580026611.01.T01 | MTR_5g045170 | 43.557 | 388 | 190 | 10 | 11 | 382 | 16 | 390 | 6.39e-89 | 274 |
MsG0580026611.01.T01 | MTR_0009s0080 | 46.216 | 370 | 185 | 6 | 11 | 369 | 20 | 386 | 7.43e-87 | 270 |
MsG0580026611.01.T01 | MTR_3g071850 | 43.702 | 389 | 194 | 9 | 9 | 379 | 24 | 405 | 1.10e-86 | 280 |
MsG0580026611.01.T01 | MTR_5g039490 | 43.401 | 394 | 173 | 10 | 4 | 380 | 13 | 373 | 2.33e-85 | 264 |
MsG0580026611.01.T01 | MTR_5g039450 | 41.538 | 390 | 174 | 12 | 8 | 381 | 5 | 356 | 1.89e-81 | 253 |
MsG0580026611.01.T01 | MTR_5g039470 | 40.828 | 338 | 173 | 9 | 25 | 346 | 1 | 327 | 6.43e-69 | 220 |
MsG0580026611.01.T01 | MTR_1089s0010 | 38.442 | 385 | 208 | 12 | 9 | 380 | 8 | 376 | 2.46e-68 | 220 |
MsG0580026611.01.T01 | MTR_5g031970 | 41.207 | 381 | 176 | 9 | 9 | 382 | 16 | 355 | 4.79e-68 | 219 |
MsG0580026611.01.T01 | MTR_6g040270 | 38.168 | 393 | 196 | 13 | 14 | 383 | 13 | 381 | 7.82e-68 | 219 |
MsG0580026611.01.T01 | MTR_1g066830 | 36.224 | 392 | 223 | 9 | 5 | 380 | 4 | 384 | 6.24e-64 | 209 |
MsG0580026611.01.T01 | MTR_5g073420 | 37.150 | 393 | 214 | 10 | 5 | 383 | 7 | 380 | 1.78e-61 | 202 |
MsG0580026611.01.T01 | MTR_1g059860 | 39.869 | 306 | 141 | 6 | 76 | 343 | 11 | 311 | 5.03e-58 | 192 |
MsG0580026611.01.T01 | MTR_7g026500 | 36.041 | 394 | 225 | 12 | 5 | 381 | 10 | 393 | 1.09e-57 | 193 |
MsG0580026611.01.T01 | MTR_5g058000 | 37.563 | 394 | 206 | 13 | 2 | 380 | 4 | 372 | 1.38e-57 | 192 |
MsG0580026611.01.T01 | MTR_5g058100 | 36.041 | 394 | 225 | 13 | 1 | 380 | 1 | 381 | 8.89e-57 | 191 |
MsG0580026611.01.T01 | MTR_1g108820 | 35.661 | 401 | 216 | 15 | 2 | 380 | 3 | 383 | 2.32e-52 | 179 |
MsG0580026611.01.T01 | MTR_1g085120 | 33.247 | 388 | 232 | 8 | 9 | 380 | 92 | 468 | 1.51e-51 | 179 |
MsG0580026611.01.T01 | MTR_1g085120 | 33.247 | 388 | 232 | 8 | 9 | 380 | 167 | 543 | 4.74e-51 | 179 |
MsG0580026611.01.T01 | MTR_6g022500 | 32.898 | 383 | 236 | 9 | 9 | 380 | 101 | 473 | 1.98e-49 | 173 |
MsG0580026611.01.T01 | MTR_6g011460 | 34.351 | 393 | 217 | 13 | 9 | 380 | 46 | 418 | 3.54e-49 | 171 |
MsG0580026611.01.T01 | MTR_7g055943 | 34.351 | 393 | 227 | 11 | 7 | 380 | 38 | 418 | 4.42e-49 | 171 |
MsG0580026611.01.T01 | MTR_4g039440 | 33.933 | 389 | 229 | 13 | 8 | 380 | 33 | 409 | 4.78e-48 | 168 |
MsG0580026611.01.T01 | MTR_5g073370 | 34.015 | 391 | 225 | 13 | 6 | 379 | 2 | 376 | 1.99e-45 | 160 |
MsG0580026611.01.T01 | MTR_3g071790 | 44.624 | 186 | 98 | 3 | 163 | 344 | 18 | 202 | 2.58e-45 | 155 |
MsG0580026611.01.T01 | MTR_6g044572 | 33.252 | 412 | 207 | 15 | 9 | 380 | 2 | 385 | 4.76e-45 | 160 |
MsG0580026611.01.T01 | MTR_5g061680 | 36.957 | 322 | 155 | 10 | 7 | 317 | 9 | 293 | 9.70e-45 | 157 |
MsG0580026611.01.T01 | MTR_6g044560 | 33.092 | 414 | 209 | 15 | 7 | 380 | 176 | 561 | 1.12e-43 | 159 |
MsG0580026611.01.T01 | MTR_6g022360 | 32.905 | 389 | 222 | 13 | 8 | 381 | 42 | 406 | 6.92e-43 | 154 |
MsG0580026611.01.T01 | MTR_1g041245 | 32.432 | 407 | 224 | 14 | 1 | 380 | 1 | 383 | 1.00e-42 | 153 |
MsG0580026611.01.T01 | MTR_1g108800 | 34.694 | 392 | 188 | 13 | 2 | 380 | 3 | 339 | 2.79e-42 | 151 |
MsG0580026611.01.T01 | MTR_7g056433 | 30.653 | 398 | 244 | 10 | 2 | 381 | 4 | 387 | 1.21e-39 | 145 |
MsG0580026611.01.T01 | MTR_7g088260 | 31.458 | 391 | 237 | 13 | 7 | 383 | 89 | 462 | 1.94e-39 | 146 |
MsG0580026611.01.T01 | MTR_7g033915 | 28.861 | 395 | 219 | 11 | 7 | 380 | 9 | 362 | 5.70e-39 | 143 |
MsG0580026611.01.T01 | MTR_2g005990 | 32.598 | 408 | 222 | 14 | 7 | 380 | 4 | 392 | 2.44e-38 | 142 |
MsG0580026611.01.T01 | MTR_5g073340 | 34.146 | 328 | 164 | 12 | 9 | 319 | 8 | 300 | 7.03e-38 | 139 |
MsG0580026611.01.T01 | MTR_7g098510 | 33.247 | 388 | 228 | 11 | 9 | 381 | 18 | 389 | 1.79e-37 | 139 |
MsG0580026611.01.T01 | MTR_7g115270 | 28.715 | 397 | 253 | 9 | 7 | 380 | 10 | 399 | 4.50e-37 | 139 |
MsG0580026611.01.T01 | MTR_3g108150 | 32.775 | 418 | 211 | 16 | 1 | 381 | 1 | 385 | 5.63e-37 | 138 |
MsG0580026611.01.T01 | MTR_5g024060 | 44.681 | 188 | 86 | 5 | 189 | 375 | 30 | 200 | 7.09e-37 | 134 |
MsG0580026611.01.T01 | MTR_3g107100 | 30.273 | 403 | 232 | 15 | 9 | 380 | 11 | 395 | 1.60e-35 | 134 |
MsG0580026611.01.T01 | MTR_3g108560 | 31.458 | 391 | 235 | 14 | 5 | 381 | 16 | 387 | 1.75e-35 | 134 |
MsG0580026611.01.T01 | MTR_0543s0010 | 30.749 | 387 | 244 | 11 | 1 | 381 | 80 | 448 | 1.18e-34 | 133 |
MsG0580026611.01.T01 | MTR_7g098570 | 32.316 | 393 | 221 | 13 | 8 | 378 | 19 | 388 | 1.36e-34 | 133 |
MsG0580026611.01.T01 | MTR_7g033990 | 31.500 | 400 | 224 | 14 | 1 | 375 | 1 | 375 | 2.03e-34 | 132 |
MsG0580026611.01.T01 | MTR_6g022520 | 31.692 | 325 | 188 | 7 | 76 | 383 | 6 | 313 | 4.16e-34 | 129 |
MsG0580026611.01.T01 | MTR_5g008950 | 30.052 | 386 | 230 | 15 | 11 | 380 | 1 | 362 | 4.26e-34 | 130 |
MsG0580026611.01.T01 | MTR_7g075820 | 31.450 | 407 | 227 | 16 | 7 | 380 | 4 | 391 | 5.96e-34 | 130 |
MsG0580026611.01.T01 | MTR_7g032380 | 30.077 | 389 | 213 | 12 | 7 | 380 | 9 | 353 | 6.58e-34 | 129 |
MsG0580026611.01.T01 | MTR_7g007080 | 31.888 | 392 | 228 | 15 | 9 | 380 | 4 | 376 | 2.94e-33 | 128 |
MsG0580026611.01.T01 | MTR_3g023630 | 32.242 | 397 | 215 | 16 | 7 | 380 | 6 | 371 | 1.08e-32 | 126 |
MsG0580026611.01.T01 | MTR_3g036250 | 29.412 | 391 | 231 | 11 | 6 | 380 | 2 | 363 | 1.53e-32 | 125 |
MsG0580026611.01.T01 | MTR_5g054920 | 39.899 | 198 | 110 | 6 | 171 | 366 | 2 | 192 | 2.71e-32 | 120 |
MsG0580026611.01.T01 | MTR_7g098480 | 32.376 | 383 | 228 | 11 | 9 | 377 | 18 | 383 | 5.14e-32 | 126 |
MsG0580026611.01.T01 | MTR_3g105060 | 28.756 | 386 | 238 | 11 | 7 | 381 | 12 | 371 | 7.93e-32 | 124 |
MsG0580026611.01.T01 | MTR_3g107120 | 27.423 | 423 | 233 | 12 | 1 | 382 | 1 | 390 | 2.86e-31 | 123 |
MsG0580026611.01.T01 | MTR_0492s0020 | 30.532 | 357 | 224 | 11 | 1 | 351 | 80 | 418 | 3.19e-31 | 123 |
MsG0580026611.01.T01 | MTR_7g056277 | 29.367 | 395 | 234 | 14 | 9 | 383 | 259 | 628 | 5.94e-31 | 124 |
MsG0580026611.01.T01 | MTR_7g056287 | 28.861 | 395 | 236 | 14 | 9 | 383 | 3 | 372 | 9.80e-30 | 118 |
MsG0580026611.01.T01 | MTR_3g095600 | 30.667 | 375 | 169 | 11 | 7 | 374 | 2 | 292 | 1.64e-29 | 115 |
MsG0580026611.01.T01 | MTR_7g083740 | 27.204 | 397 | 230 | 12 | 2 | 381 | 11 | 365 | 1.84e-29 | 117 |
MsG0580026611.01.T01 | MTR_3g099830 | 29.208 | 404 | 229 | 12 | 1 | 380 | 1 | 371 | 9.65e-29 | 115 |
MsG0580026611.01.T01 | MTR_2g007450 | 30.303 | 429 | 231 | 18 | 1 | 380 | 8 | 417 | 7.25e-28 | 114 |
MsG0580026611.01.T01 | MTR_2g007400 | 29.880 | 415 | 222 | 16 | 9 | 380 | 12 | 400 | 1.04e-27 | 113 |
MsG0580026611.01.T01 | MTR_1g053025 | 28.395 | 405 | 241 | 14 | 9 | 382 | 2 | 388 | 1.58e-27 | 112 |
MsG0580026611.01.T01 | MTR_7g034115 | 30.749 | 374 | 212 | 16 | 1 | 350 | 1 | 351 | 1.85e-27 | 112 |
MsG0580026611.01.T01 | MTR_3g107160 | 26.716 | 408 | 244 | 12 | 2 | 382 | 3 | 382 | 2.11e-27 | 112 |
MsG0580026611.01.T01 | MTR_2g008310 | 29.975 | 397 | 223 | 15 | 9 | 380 | 2 | 368 | 5.77e-27 | 110 |
MsG0580026611.01.T01 | MTR_7g056430 | 28.462 | 390 | 235 | 12 | 1 | 377 | 1 | 359 | 1.38e-26 | 112 |
MsG0580026611.01.T01 | MTR_3g040700 | 28.531 | 354 | 207 | 10 | 8 | 343 | 42 | 367 | 1.62e-26 | 110 |
MsG0580026611.01.T01 | MTR_7g056420 | 28.462 | 390 | 235 | 12 | 1 | 377 | 1 | 359 | 1.83e-26 | 112 |
MsG0580026611.01.T01 | MTR_2g007360 | 28.429 | 401 | 221 | 14 | 7 | 380 | 10 | 371 | 3.28e-26 | 108 |
MsG0580026611.01.T01 | MTR_5g008920 | 30.051 | 396 | 236 | 16 | 3 | 380 | 6 | 378 | 4.98e-26 | 108 |
MsG0580026611.01.T01 | MTR_7g034120 | 31.438 | 299 | 167 | 10 | 99 | 380 | 28 | 305 | 6.23e-26 | 106 |
MsG0580026611.01.T01 | MTR_5g033200 | 36.723 | 177 | 91 | 7 | 205 | 375 | 13 | 174 | 6.87e-26 | 103 |
MsG0580026611.01.T01 | MTR_1g107385 | 28.641 | 412 | 235 | 15 | 7 | 380 | 30 | 420 | 1.33e-25 | 107 |
MsG0580026611.01.T01 | MTR_1g108820 | 31.715 | 309 | 177 | 12 | 2 | 289 | 3 | 298 | 1.36e-25 | 106 |
MsG0580026611.01.T01 | MTR_7g032370 | 28.877 | 374 | 226 | 11 | 21 | 380 | 2 | 349 | 1.54e-25 | 106 |
MsG0580026611.01.T01 | MTR_5g044790 | 42.857 | 147 | 55 | 2 | 261 | 380 | 293 | 437 | 5.70e-25 | 105 |
MsG0580026611.01.T01 | MTR_1377s0010 | 43.519 | 108 | 56 | 2 | 250 | 357 | 32 | 134 | 1.26e-24 | 98.6 |
MsG0580026611.01.T01 | MTR_7g056020 | 28.646 | 384 | 230 | 10 | 6 | 375 | 13 | 366 | 1.61e-24 | 105 |
MsG0580026611.01.T01 | MTR_2g008320 | 29.095 | 409 | 235 | 16 | 2 | 382 | 45 | 426 | 1.65e-24 | 104 |
MsG0580026611.01.T01 | MTR_2g007090 | 31.726 | 394 | 139 | 17 | 7 | 380 | 8 | 291 | 1.83e-24 | 102 |
MsG0580026611.01.T01 | MTR_7g022105 | 27.979 | 386 | 233 | 12 | 7 | 368 | 47 | 411 | 2.08e-24 | 104 |
MsG0580026611.01.T01 | MTR_1g085120 | 30.640 | 297 | 183 | 7 | 9 | 289 | 179 | 468 | 2.12e-24 | 104 |
MsG0580026611.01.T01 | MTR_3g467400 | 28.079 | 406 | 216 | 19 | 9 | 381 | 3 | 365 | 1.14e-23 | 101 |
MsG0580026611.01.T01 | MTR_4g098590 | 29.351 | 385 | 218 | 18 | 11 | 361 | 1 | 365 | 1.45e-23 | 101 |
MsG0580026611.01.T01 | MTR_3g087260 | 33.688 | 282 | 168 | 9 | 109 | 381 | 184 | 455 | 3.59e-23 | 100 |
MsG0580026611.01.T01 | MTR_3g087260 | 31.317 | 281 | 159 | 9 | 9 | 285 | 12 | 262 | 1.14e-12 | 69.3 |
MsG0580026611.01.T01 | MTR_3g082890 | 26.521 | 411 | 253 | 12 | 4 | 383 | 92 | 484 | 4.33e-23 | 100 |
MsG0580026611.01.T01 | MTR_5g012840 | 27.298 | 359 | 194 | 12 | 34 | 381 | 14 | 316 | 6.02e-23 | 98.6 |
MsG0580026611.01.T01 | MTR_3g109982 | 33.205 | 259 | 149 | 9 | 127 | 375 | 224 | 468 | 2.41e-22 | 99.4 |
MsG0580026611.01.T01 | MTR_3g109982 | 36.957 | 184 | 108 | 5 | 9 | 188 | 13 | 192 | 4.30e-14 | 74.3 |
MsG0580026611.01.T01 | MTR_7g007340 | 28.288 | 403 | 211 | 15 | 1 | 377 | 1 | 351 | 2.64e-22 | 97.4 |
MsG0580026611.01.T01 | MTR_7g021990 | 28.389 | 391 | 225 | 15 | 7 | 368 | 46 | 410 | 6.65e-22 | 97.1 |
MsG0580026611.01.T01 | MTR_7g060470 | 27.200 | 375 | 232 | 12 | 9 | 355 | 3 | 364 | 9.60e-22 | 96.3 |
MsG0580026611.01.T01 | MTR_7g021950 | 28.389 | 391 | 225 | 15 | 7 | 368 | 46 | 410 | 1.17e-21 | 97.1 |
MsG0580026611.01.T01 | MTR_5g084070 | 28.341 | 434 | 223 | 18 | 6 | 375 | 10 | 419 | 1.73e-21 | 95.9 |
MsG0580026611.01.T01 | MTR_5g083890 | 30.077 | 389 | 205 | 17 | 9 | 350 | 6 | 374 | 1.78e-21 | 96.3 |
MsG0580026611.01.T01 | MTR_2g007550 | 27.763 | 389 | 214 | 13 | 2 | 383 | 7 | 335 | 1.99e-21 | 94.7 |
MsG0580026611.01.T01 | MTR_3g095630 | 37.356 | 174 | 90 | 8 | 205 | 374 | 18 | 176 | 5.89e-21 | 90.1 |
MsG0580026611.01.T01 | MTR_7g114710 | 28.784 | 403 | 210 | 17 | 7 | 382 | 11 | 363 | 1.02e-20 | 92.8 |
MsG0580026611.01.T01 | MTR_7g007370 | 30.966 | 352 | 186 | 11 | 6 | 349 | 14 | 316 | 1.03e-20 | 92.4 |
MsG0580026611.01.T01 | MTR_5g080710 | 28.571 | 427 | 238 | 17 | 6 | 375 | 30 | 446 | 2.70e-20 | 92.4 |
MsG0580026611.01.T01 | MTR_7g056447 | 32.973 | 185 | 122 | 1 | 1 | 183 | 1 | 185 | 1.77e-19 | 88.2 |
MsG0580026611.01.T01 | MTR_8g062080 | 25.618 | 445 | 249 | 15 | 1 | 380 | 15 | 442 | 1.40e-18 | 87.4 |
MsG0580026611.01.T01 | MTR_2g007500 | 26.149 | 348 | 211 | 13 | 1 | 325 | 6 | 330 | 1.53e-18 | 86.3 |
MsG0580026611.01.T01 | MTR_5g013500 | 26.650 | 409 | 226 | 14 | 1 | 381 | 1 | 363 | 2.41e-18 | 85.9 |
MsG0580026611.01.T01 | MTR_8g062310 | 26.291 | 426 | 253 | 14 | 1 | 380 | 15 | 425 | 3.80e-18 | 85.9 |
MsG0580026611.01.T01 | MTR_5g058350 | 33.708 | 178 | 96 | 4 | 8 | 185 | 7 | 162 | 6.84e-18 | 81.3 |
MsG0580026611.01.T01 | MTR_3g026920 | 27.209 | 430 | 215 | 17 | 8 | 382 | 18 | 404 | 7.78e-18 | 84.7 |
MsG0580026611.01.T01 | MTR_7g034110 | 25.373 | 335 | 192 | 9 | 7 | 332 | 9 | 294 | 3.12e-17 | 82.4 |
MsG0580026611.01.T01 | MTR_6g022410 | 43.750 | 80 | 45 | 0 | 301 | 380 | 25 | 104 | 7.78e-17 | 76.3 |
MsG0580026611.01.T01 | MTR_8g062010 | 25.893 | 448 | 243 | 21 | 1 | 380 | 1 | 427 | 1.37e-16 | 81.3 |
MsG0580026611.01.T01 | MTR_5g076150 | 30.126 | 239 | 124 | 10 | 105 | 315 | 4 | 227 | 1.65e-16 | 78.6 |
MsG0580026611.01.T01 | MTR_4g134150 | 32.787 | 183 | 115 | 3 | 7 | 187 | 12 | 188 | 2.03e-16 | 78.2 |
MsG0580026611.01.T01 | MTR_3g108560 | 29.766 | 299 | 179 | 13 | 5 | 289 | 16 | 297 | 2.84e-16 | 79.3 |
MsG0580026611.01.T01 | MTR_4g080610 | 24.332 | 374 | 229 | 11 | 11 | 371 | 14 | 346 | 2.66e-15 | 77.0 |
MsG0580026611.01.T01 | MTR_8g469020 | 24.622 | 463 | 245 | 16 | 5 | 380 | 3 | 448 | 3.35e-15 | 77.0 |
MsG0580026611.01.T01 | MTR_3g110010 | 36.957 | 184 | 108 | 5 | 9 | 188 | 13 | 192 | 4.65e-14 | 74.3 |
MsG0580026611.01.T01 | MTR_8g085430 | 31.343 | 201 | 105 | 7 | 7 | 185 | 9 | 198 | 6.56e-14 | 72.4 |
MsG0580026611.01.T01 | MTR_8g085430 | 40.476 | 84 | 46 | 1 | 273 | 352 | 215 | 298 | 2.72e-11 | 64.7 |
MsG0580026611.01.T01 | MTR_6g033095 | 41.975 | 81 | 43 | 1 | 270 | 350 | 108 | 184 | 1.56e-13 | 69.3 |
MsG0580026611.01.T01 | MTR_5g024050 | 43.956 | 91 | 48 | 1 | 146 | 233 | 1 | 91 | 2.70e-13 | 66.2 |
MsG0580026611.01.T01 | MTR_7g034090 | 37.037 | 135 | 70 | 6 | 251 | 380 | 185 | 309 | 5.13e-13 | 70.5 |
MsG0580026611.01.T01 | MTR_7g056280 | 27.273 | 242 | 124 | 11 | 154 | 383 | 372 | 573 | 8.13e-13 | 70.1 |
MsG0580026611.01.T01 | MTR_2g007610 | 30.070 | 143 | 87 | 3 | 240 | 380 | 17 | 148 | 3.67e-12 | 64.7 |
MsG0580026611.01.T01 | MTR_7g033945 | 29.697 | 165 | 104 | 3 | 7 | 161 | 9 | 171 | 3.92e-12 | 64.7 |
MsG0580026611.01.T01 | MTR_4g096730 | 36.957 | 92 | 53 | 2 | 292 | 382 | 1 | 88 | 9.93e-12 | 61.6 |
MsG0580026611.01.T01 | MTR_3g115430 | 30.392 | 102 | 65 | 2 | 280 | 381 | 28 | 123 | 7.92e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026611.01.T01 | AT5G56420 | 25.995 | 427 | 250 | 13 | 9 | 381 | 6 | 420 | 1.10e-23 | 102 |
MsG0580026611.01.T01 | AT5G56420 | 25.995 | 427 | 250 | 13 | 9 | 381 | 6 | 420 | 1.10e-23 | 102 |
MsG0580026611.01.T01 | AT5G56420 | 25.995 | 427 | 250 | 13 | 9 | 381 | 6 | 420 | 1.10e-23 | 102 |
MsG0580026611.01.T01 | AT5G56810 | 26.914 | 431 | 252 | 13 | 7 | 383 | 13 | 434 | 1.96e-19 | 89.7 |
MsG0580026611.01.T01 | AT5G56820 | 25.891 | 421 | 259 | 12 | 8 | 383 | 14 | 426 | 5.43e-19 | 88.6 |
MsG0580026611.01.T01 | AT4G26340 | 25.290 | 431 | 249 | 10 | 9 | 381 | 2 | 417 | 1.15e-18 | 87.4 |
MsG0580026611.01.T01 | AT5G38590 | 28.049 | 410 | 244 | 11 | 9 | 372 | 2 | 406 | 4.57e-17 | 82.8 |
MsG0580026611.01.T01 | AT4G10400 | 27.078 | 421 | 242 | 14 | 9 | 380 | 2 | 406 | 4.84e-16 | 79.7 |
MsG0580026611.01.T01 | AT4G10400 | 27.078 | 421 | 242 | 14 | 9 | 380 | 2 | 406 | 4.84e-16 | 79.7 |
MsG0580026611.01.T01 | AT4G10400 | 27.078 | 421 | 242 | 14 | 9 | 380 | 2 | 406 | 4.84e-16 | 79.7 |
MsG0580026611.01.T01 | AT1G55030 | 26.014 | 419 | 236 | 16 | 8 | 370 | 18 | 418 | 7.34e-16 | 79.3 |
MsG0580026611.01.T01 | AT2G42730 | 24.123 | 456 | 262 | 17 | 6 | 383 | 2 | 451 | 7.82e-16 | 79.3 |
MsG0580026611.01.T01 | AT1G55030 | 26.014 | 419 | 236 | 16 | 8 | 370 | 8 | 408 | 9.36e-16 | 79.0 |
MsG0580026611.01.T01 | AT4G00315 | 26.398 | 447 | 244 | 16 | 9 | 380 | 2 | 438 | 1.10e-15 | 78.6 |
MsG0580026611.01.T01 | AT3G60040 | 32.212 | 208 | 111 | 8 | 7 | 188 | 11 | 214 | 1.70e-15 | 78.6 |
MsG0580026611.01.T01 | AT3G60040 | 32.212 | 208 | 111 | 8 | 7 | 188 | 228 | 431 | 2.33e-15 | 78.2 |
MsG0580026611.01.T01 | AT3G60040 | 32.212 | 208 | 111 | 8 | 7 | 188 | 230 | 433 | 2.34e-15 | 78.2 |
MsG0580026611.01.T01 | AT3G60040 | 32.212 | 208 | 111 | 8 | 7 | 188 | 230 | 433 | 2.42e-15 | 78.2 |
MsG0580026611.01.T01 | AT3G60040 | 32.212 | 208 | 111 | 8 | 7 | 188 | 231 | 434 | 2.44e-15 | 78.2 |
MsG0580026611.01.T01 | AT4G00160 | 23.853 | 436 | 262 | 14 | 9 | 383 | 16 | 442 | 3.32e-15 | 77.4 |
MsG0580026611.01.T01 | AT3G42770 | 23.990 | 421 | 262 | 12 | 11 | 376 | 1 | 418 | 4.87e-15 | 77.0 |
MsG0580026611.01.T01 | AT5G56370 | 24.824 | 427 | 258 | 12 | 9 | 381 | 2 | 419 | 1.04e-14 | 75.5 |
MsG0580026611.01.T01 | AT5G56370 | 24.824 | 427 | 258 | 12 | 9 | 381 | 2 | 419 | 1.04e-14 | 75.5 |
MsG0580026611.01.T01 | AT5G22610 | 25.472 | 424 | 256 | 18 | 9 | 380 | 18 | 433 | 1.57e-14 | 75.1 |
MsG0580026611.01.T01 | AT3G58880 | 28.247 | 308 | 195 | 9 | 8 | 293 | 2 | 305 | 1.82e-14 | 75.1 |
MsG0580026611.01.T01 | AT2G04230 | 25.822 | 426 | 220 | 15 | 3 | 353 | 7 | 411 | 3.44e-14 | 74.3 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 6 | 205 | 4.29e-14 | 73.2 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 6 | 205 | 4.29e-14 | 73.2 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 6 | 205 | 4.38e-14 | 72.8 |
MsG0580026611.01.T01 | AT3G59000 | 34.637 | 179 | 92 | 5 | 9 | 167 | 2 | 175 | 6.47e-14 | 73.6 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 6 | 205 | 7.29e-14 | 72.8 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 6 | 205 | 7.29e-14 | 72.8 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 6 | 205 | 7.29e-14 | 72.8 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 6 | 205 | 7.29e-14 | 72.8 |
MsG0580026611.01.T01 | AT1G06630 | 31.373 | 204 | 120 | 7 | 1 | 188 | 15 | 214 | 9.32e-14 | 72.8 |
MsG0580026611.01.T01 | AT1G06630 | 32.843 | 204 | 117 | 9 | 1 | 188 | 6 | 205 | 1.12e-13 | 72.8 |
MsG0580026611.01.T01 | AT1G32375 | 23.557 | 433 | 255 | 13 | 9 | 380 | 2 | 419 | 6.60e-13 | 70.1 |
MsG0580026611.01.T01 | AT1G32375 | 23.557 | 433 | 255 | 13 | 9 | 380 | 2 | 419 | 6.60e-13 | 70.1 |
MsG0580026611.01.T01 | AT4G22280 | 34.043 | 188 | 112 | 6 | 9 | 189 | 2 | 184 | 6.79e-13 | 69.3 |
MsG0580026611.01.T01 | AT4G22280 | 34.043 | 188 | 112 | 6 | 9 | 189 | 2 | 184 | 7.07e-13 | 70.1 |
MsG0580026611.01.T01 | AT5G56690 | 27.047 | 403 | 224 | 16 | 14 | 353 | 7 | 402 | 1.75e-12 | 68.6 |
MsG0580026611.01.T01 | AT4G27050 | 22.944 | 462 | 253 | 18 | 8 | 380 | 3 | 450 | 1.84e-12 | 68.9 |
MsG0580026611.01.T01 | AT4G27050 | 22.944 | 462 | 253 | 18 | 8 | 380 | 3 | 450 | 1.84e-12 | 68.9 |
MsG0580026611.01.T01 | AT4G27050 | 22.944 | 462 | 253 | 18 | 8 | 380 | 3 | 450 | 1.84e-12 | 68.9 |
MsG0580026611.01.T01 | AT4G27050 | 22.944 | 462 | 253 | 18 | 8 | 380 | 3 | 450 | 1.84e-12 | 68.9 |
MsG0580026611.01.T01 | AT4G27050 | 22.944 | 462 | 253 | 18 | 8 | 380 | 3 | 450 | 1.84e-12 | 68.9 |
MsG0580026611.01.T01 | AT4G14103 | 31.443 | 194 | 121 | 5 | 7 | 190 | 6 | 197 | 1.93e-12 | 68.6 |
MsG0580026611.01.T01 | AT4G14103 | 31.443 | 194 | 121 | 5 | 7 | 190 | 6 | 197 | 1.93e-12 | 68.6 |
MsG0580026611.01.T01 | AT5G15620 | 32.812 | 192 | 104 | 8 | 9 | 188 | 2 | 180 | 1.93e-12 | 68.9 |
MsG0580026611.01.T01 | AT4G14103 | 31.443 | 194 | 121 | 5 | 7 | 190 | 6 | 197 | 3.37e-12 | 68.2 |
MsG0580026611.01.T01 | AT4G14096 | 33.161 | 193 | 113 | 7 | 9 | 190 | 8 | 195 | 3.74e-12 | 67.8 |
MsG0580026611.01.T01 | AT4G14096 | 33.161 | 193 | 113 | 7 | 9 | 190 | 8 | 195 | 3.74e-12 | 67.8 |
MsG0580026611.01.T01 | AT5G44950 | 31.551 | 187 | 113 | 6 | 9 | 186 | 4 | 184 | 9.79e-12 | 66.6 |
MsG0580026611.01.T01 | AT5G38590 | 32.967 | 182 | 118 | 2 | 9 | 187 | 2 | 182 | 9.93e-12 | 65.5 |
MsG0580026611.01.T01 | AT3G44060 | 26.164 | 451 | 223 | 21 | 11 | 380 | 1 | 422 | 1.14e-11 | 66.2 |
MsG0580026611.01.T01 | AT5G56452 | 35.185 | 108 | 70 | 0 | 275 | 382 | 118 | 225 | 1.91e-11 | 63.9 |
MsG0580026611.01.T01 | AT5G56452 | 35.185 | 108 | 70 | 0 | 275 | 382 | 119 | 226 | 2.00e-11 | 63.9 |
MsG0580026611.01.T01 | AT5G44850 | 28.000 | 300 | 185 | 13 | 98 | 383 | 49 | 331 | 2.11e-11 | 65.1 |
MsG0580026611.01.T01 | AT3G44080 | 24.938 | 401 | 243 | 15 | 11 | 380 | 9 | 382 | 5.56e-11 | 63.9 |
MsG0580026611.01.T01 | AT5G56370 | 32.432 | 185 | 115 | 5 | 9 | 186 | 2 | 183 | 5.66e-11 | 63.5 |
MsG0580026611.01.T01 | AT5G38392 | 33.171 | 205 | 107 | 10 | 9 | 190 | 2 | 199 | 7.89e-11 | 62.0 |
MsG0580026611.01.T01 | AT4G13960 | 33.136 | 169 | 98 | 5 | 9 | 164 | 2 | 168 | 8.45e-11 | 63.9 |
MsG0580026611.01.T01 | AT4G13960 | 33.136 | 169 | 98 | 5 | 9 | 164 | 2 | 168 | 8.45e-11 | 63.9 |
Find 77 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTAGTCAAATCCTCCAATT+TGG | 0.206536 | 5:-40596169 | None:intergenic |
GATTTAATGAAACTTGTTTA+TGG | 0.212064 | 5:+40596141 | MsG0580026611.01.T01:CDS |
AACTTCACACGAATACTTTC+TGG | 0.237609 | 5:-40596285 | None:intergenic |
TGTTTATGGGTGTCCCAAAT+TGG | 0.310696 | 5:+40596155 | MsG0580026611.01.T01:CDS |
CTTTGTTCTGAAAGCATCTC+TGG | 0.312832 | 5:-40595713 | None:intergenic |
ATGTAAAGAGCTTCAAGTTT+GGG | 0.318075 | 5:-40596570 | None:intergenic |
CTTTGCATTGTACCTTTCAT+TGG | 0.329635 | 5:+40597109 | MsG0580026611.01.T01:three_prime_UTR |
ATCTGGGTATTTCCAATCAT+TGG | 0.331437 | 5:-40596732 | None:intergenic |
AATGTAAAGAGCTTCAAGTT+TGG | 0.335454 | 5:-40596571 | None:intergenic |
ACGCCGCGGCGTCAAGGAAT+TGG | 0.341879 | 5:+40595951 | MsG0580026611.01.T01:CDS |
CGACCTCTGCATTGTATTTG+AGG | 0.342375 | 5:-40596897 | None:intergenic |
GGCTTTGATCAAGTTGGATA+AGG | 0.365889 | 5:-40596241 | None:intergenic |
TTCTGAAAGCATCTCTGGTT+CGG | 0.367634 | 5:-40595708 | None:intergenic |
TTGGAGGATTTGACTACTAA+TGG | 0.368081 | 5:+40596174 | MsG0580026611.01.T01:CDS |
TAATCGAACTTCGGATATCT+TGG | 0.372127 | 5:+40596493 | MsG0580026611.01.T01:CDS |
TTCCATGGATTGAATAATAT+AGG | 0.374316 | 5:+40597020 | MsG0580026611.01.T01:three_prime_UTR |
ACACACTCAGGAACATGATC+TGG | 0.385668 | 5:-40596749 | None:intergenic |
ATTTAATGAAACTTGTTTAT+GGG | 0.385886 | 5:+40596142 | MsG0580026611.01.T01:CDS |
ATTCGAAAACAACCAATGAT+TGG | 0.401595 | 5:+40596720 | MsG0580026611.01.T01:CDS |
CTTATATAGACTATATATAA+AGG | 0.408238 | 5:-40597051 | None:intergenic |
CTTCAAACTAAACCGATTTG+TGG | 0.412137 | 5:+40595918 | MsG0580026611.01.T01:CDS |
TGAAGCTCTTTACATTGAAA+AGG | 0.419426 | 5:+40596578 | MsG0580026611.01.T01:CDS |
ATCATGTTCCTGAGTGTGTT+AGG | 0.437035 | 5:+40596753 | MsG0580026611.01.T01:CDS |
TAAGAATTGATTTGTTTGTT+GGG | 0.438135 | 5:-40596441 | None:intergenic |
TTAGTTTGAAGCAAGGCTTC+CGG | 0.438883 | 5:-40595906 | None:intergenic |
ATAAGAATTGATTTGTTTGT+TGG | 0.442139 | 5:-40596442 | None:intergenic |
GTAGTCAAATCCTCCAATTT+GGG | 0.442225 | 5:-40596168 | None:intergenic |
TCAAGGAATTGGATATATAC+TGG | 0.445896 | 5:+40595962 | MsG0580026611.01.T01:CDS |
ATTTGACTACTAATGGTGTC+AGG | 0.447578 | 5:+40596181 | MsG0580026611.01.T01:CDS |
GCTTTGATCAAGTTGGATAA+GGG | 0.451371 | 5:-40596240 | None:intergenic |
GAAGTTTCTCACTCTGTCTA+AGG | 0.459904 | 5:+40596302 | MsG0580026611.01.T01:CDS |
GGTATTGGCTTTGATCAAGT+TGG | 0.459971 | 5:-40596247 | None:intergenic |
CAAAGTTTGTTTCCAAGTCG+TGG | 0.465273 | 5:+40595731 | MsG0580026611.01.T01:CDS |
AATTGATTTGTTTGTTGGGA+AGG | 0.467814 | 5:-40596437 | None:intergenic |
GAGTAACGGCTTTGAGGGGA+TGG | 0.470061 | 5:-40595864 | None:intergenic |
CACTTGTGGTCCTCAAATTG+TGG | 0.480152 | 5:+40596025 | MsG0580026611.01.T01:CDS |
AACCTATATTATTCAATCCA+TGG | 0.497528 | 5:-40597022 | None:intergenic |
ATCCCTACTGTCGATGTTGA+GGG | 0.501868 | 5:-40595779 | None:intergenic |
GAATTGAGCGATTCAAATAG+TGG | 0.509439 | 5:-40595757 | None:intergenic |
TTGAAAACTTAATCGAACTT+CGG | 0.510270 | 5:+40596484 | MsG0580026611.01.T01:CDS |
GGGAGAGATCCTTGGAAAAG+AGG | 0.510705 | 5:-40596939 | None:intergenic |
ATGTGTTTCAGTATATCATC+TGG | 0.517785 | 5:-40595673 | None:intergenic |
AGCAAAACGCCGCGGCGTCA+AGG | 0.526876 | 5:+40595945 | MsG0580026611.01.T01:CDS |
TTACATGTGGGAGAGATCCT+TGG | 0.530814 | 5:-40596947 | None:intergenic |
TTTATCTAGACATTTATGAC+GGG | 0.536058 | 5:+40596517 | MsG0580026611.01.T01:CDS |
TTTCAATAAAAGCTTACATG+TGG | 0.537096 | 5:-40596960 | None:intergenic |
AAAGTTTGTTTCCAAGTCGT+GGG | 0.539229 | 5:+40595732 | MsG0580026611.01.T01:CDS |
TATCCCTACTGTCGATGTTG+AGG | 0.540001 | 5:-40595780 | None:intergenic |
ACTTGTGGTCCTCAAATTGT+GGG | 0.546258 | 5:+40596026 | MsG0580026611.01.T01:CDS |
AAAGAATGTCACGGAGAACA+AGG | 0.547087 | 5:-40596104 | None:intergenic |
TTCCCTCAACATCGACAGTA+GGG | 0.550048 | 5:+40595777 | MsG0580026611.01.T01:CDS |
AAATAGTGGAACCCACGACT+TGG | 0.551445 | 5:-40595743 | None:intergenic |
CACACTCAGGAACATGATCT+GGG | 0.554638 | 5:-40596748 | None:intergenic |
TTCAATAAAAGCTTACATGT+GGG | 0.565291 | 5:-40596959 | None:intergenic |
TCCATGGAATTCATTACTCA+TGG | 0.569965 | 5:-40597006 | None:intergenic |
GAATAATAATATCCAATGAA+AGG | 0.572175 | 5:-40597121 | None:intergenic |
TTTCTGCAGCAAAACACTTG+TGG | 0.577623 | 5:+40596011 | MsG0580026611.01.T01:CDS |
TTATGGGTGTCCCAAATTGG+AGG | 0.578778 | 5:+40596158 | MsG0580026611.01.T01:CDS |
ATTCCCTCAACATCGACAGT+AGG | 0.580819 | 5:+40595776 | MsG0580026611.01.T01:CDS |
GCTGCAGAAAATAGTTGGGG+AGG | 0.583764 | 5:-40595998 | None:intergenic |
AATCGGTTTAGTTTGAAGCA+AGG | 0.585372 | 5:-40595913 | None:intergenic |
TTTGACTACTAATGGTGTCA+GGG | 0.593424 | 5:+40596182 | MsG0580026611.01.T01:CDS |
AATCATAGAAAAGAATGTCA+CGG | 0.618993 | 5:-40596113 | None:intergenic |
ACGGCTTTGAGGGGATGGCG+TGG | 0.621012 | 5:-40595859 | None:intergenic |
AGATGAGACCTAACACACTC+AGG | 0.629788 | 5:-40596761 | None:intergenic |
TTTGCTGCAGAAAATAGTTG+GGG | 0.632197 | 5:-40596001 | None:intergenic |
TAATGGTGTCAGGGGAACGT+TGG | 0.639248 | 5:+40596191 | MsG0580026611.01.T01:CDS |
ACCATGAGTAATGAATTCCA+TGG | 0.640774 | 5:+40597005 | MsG0580026611.01.T01:three_prime_UTR |
TTGGATATATACTGGTATCG+TGG | 0.649361 | 5:+40595970 | MsG0580026611.01.T01:CDS |
TTGACTACTAATGGTGTCAG+GGG | 0.655340 | 5:+40596183 | MsG0580026611.01.T01:CDS |
AAGAATGTCACGGAGAACAA+GGG | 0.675158 | 5:-40596103 | None:intergenic |
AAAAGAGTAACGGCTTTGAG+GGG | 0.681841 | 5:-40595868 | None:intergenic |
GTTCCTCAAATACAATGCAG+AGG | 0.683310 | 5:+40596894 | MsG0580026611.01.T01:CDS |
TTCATCATGTCTGTTGACTG+TGG | 0.684340 | 5:-40595643 | None:intergenic |
ATCATGTCTGTTGACTGTGG+TGG | 0.687117 | 5:-40595640 | None:intergenic |
TATCCAATTCCTTGACGCCG+CGG | 0.706011 | 5:-40595954 | None:intergenic |
GTGGAAGCAGCAAAACGCCG+CGG | 0.732612 | 5:+40595937 | MsG0580026611.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTTATATAGACTATATATAA+AGG | - | Chr5:40597054-40597073 | None:intergenic | 15.0% |
!! | TTATAATAATGGTATAAAAG+TGG | - | Chr5:40596361-40596380 | None:intergenic | 15.0% |
!!! | ATTTAATGAAACTTGTTTAT+GGG | + | Chr5:40596142-40596161 | MsG0580026611.01.T01:CDS | 15.0% |
!!! | ATAAGAATTGATTTGTTTGT+TGG | - | Chr5:40596445-40596464 | None:intergenic | 20.0% |
!!! | GATTTAATGAAACTTGTTTA+TGG | + | Chr5:40596141-40596160 | MsG0580026611.01.T01:CDS | 20.0% |
!!! | TAAGAATTGATTTGTTTGTT+GGG | - | Chr5:40596444-40596463 | None:intergenic | 20.0% |
!!! | TCAATTACCAGAAAATTTTA+TGG | + | Chr5:40597074-40597093 | MsG0580026611.01.T01:three_prime_UTR | 20.0% |
!!! | TTTTATCTAGACATTTATGA+CGG | + | Chr5:40596516-40596535 | MsG0580026611.01.T01:CDS | 20.0% |
! | AACCTATATTATTCAATCCA+TGG | - | Chr5:40597025-40597044 | None:intergenic | 25.0% |
! | AACCTCAAAAATATAGGTAT+TGG | - | Chr5:40596265-40596284 | None:intergenic | 25.0% |
! | AATAATGGTATAAAAGTGGA+TGG | - | Chr5:40596357-40596376 | None:intergenic | 25.0% |
! | AATCATAGAAAAGAATGTCA+CGG | - | Chr5:40596116-40596135 | None:intergenic | 25.0% |
! | ATATTGCCAAAAAAGAGTAA+CGG | - | Chr5:40595881-40595900 | None:intergenic | 25.0% |
! | TGTAAAAATACCTACTTGAT+TGG | - | Chr5:40596655-40596674 | None:intergenic | 25.0% |
! | TTCAATAAAAGCTTACATGT+GGG | - | Chr5:40596962-40596981 | None:intergenic | 25.0% |
! | TTGAAAACTTAATCGAACTT+CGG | + | Chr5:40596484-40596503 | MsG0580026611.01.T01:CDS | 25.0% |
! | TTTATCTAGACATTTATGAC+GGG | + | Chr5:40596517-40596536 | MsG0580026611.01.T01:CDS | 25.0% |
! | TTTCAATAAAAGCTTACATG+TGG | - | Chr5:40596963-40596982 | None:intergenic | 25.0% |
!! | AAATGCACCATAAAATTTTC+TGG | - | Chr5:40597084-40597103 | None:intergenic | 25.0% |
!! | ATTATGTCTCTTGTTTGATT+TGG | + | Chr5:40596386-40596405 | MsG0580026611.01.T01:intron | 25.0% |
!! | TGACATTCTTTTCTATGATT+TGG | + | Chr5:40596116-40596135 | MsG0580026611.01.T01:CDS | 25.0% |
!! | TTCCATGGATTGAATAATAT+AGG | + | Chr5:40597020-40597039 | MsG0580026611.01.T01:three_prime_UTR | 25.0% |
ATGTGTTTCAGTATATCATC+TGG | - | Chr5:40595676-40595695 | None:intergenic | 30.0% | |
ATTCGAAAACAACCAATGAT+TGG | + | Chr5:40596720-40596739 | MsG0580026611.01.T01:CDS | 30.0% | |
CAAAAATATCCCACAATTTG+AGG | - | Chr5:40596038-40596057 | None:intergenic | 30.0% | |
CTGTCAATCATAGTCAAAAA+CGG | - | Chr5:40596681-40596700 | None:intergenic | 30.0% | |
TCAAGGAATTGGATATATAC+TGG | + | Chr5:40595962-40595981 | MsG0580026611.01.T01:CDS | 30.0% | |
TCACGTCAATAGATAGTTAT+TGG | + | Chr5:40596609-40596628 | MsG0580026611.01.T01:intron | 30.0% | |
TGAAGCTCTTTACATTGAAA+AGG | + | Chr5:40596578-40596597 | MsG0580026611.01.T01:CDS | 30.0% | |
TGTCAATCATAGTCAAAAAC+GGG | - | Chr5:40596680-40596699 | None:intergenic | 30.0% | |
TTATTCTCTTCCAATCAAGT+AGG | + | Chr5:40596642-40596661 | MsG0580026611.01.T01:intron | 30.0% | |
! | AAAACTTATCCTCTTTTCCA+AGG | + | Chr5:40596930-40596949 | MsG0580026611.01.T01:CDS | 30.0% |
! | AATGTAAAGAGCTTCAAGTT+TGG | - | Chr5:40596574-40596593 | None:intergenic | 30.0% |
! | ATGTAAAGAGCTTCAAGTTT+GGG | - | Chr5:40596573-40596592 | None:intergenic | 30.0% |
! | ATTTTTGTACTCAGTATGGT+TGG | + | Chr5:40596051-40596070 | MsG0580026611.01.T01:CDS | 30.0% |
! | TTTTGCTGCAGAAAATAGTT+GGG | - | Chr5:40596005-40596024 | None:intergenic | 30.0% |
!! | AATTGATTTGTTTGTTGGGA+AGG | - | Chr5:40596440-40596459 | None:intergenic | 30.0% |
!! | AGCCAATACCTATATTTTTG+AGG | + | Chr5:40596260-40596279 | MsG0580026611.01.T01:CDS | 30.0% |
!! | GGATATTTTTGTACTCAGTA+TGG | + | Chr5:40596047-40596066 | MsG0580026611.01.T01:CDS | 30.0% |
!! | GTTTTTGACTATGATTGACA+GGG | + | Chr5:40596680-40596699 | MsG0580026611.01.T01:intron | 30.0% |
!! | TTCTGGAACCTCAAAAATAT+AGG | - | Chr5:40596271-40596290 | None:intergenic | 30.0% |
!! | TTTTTGACTATGATTGACAG+GGG | + | Chr5:40596681-40596700 | MsG0580026611.01.T01:intron | 30.0% |
!!! | TTTTTTGGCAATATAGTGTC+CGG | + | Chr5:40595887-40595906 | MsG0580026611.01.T01:CDS | 30.0% |
AAAAAAGAGTAACGGCTTTG+AGG | - | Chr5:40595873-40595892 | None:intergenic | 35.0% | |
AACTTCACACGAATACTTTC+TGG | - | Chr5:40596288-40596307 | None:intergenic | 35.0% | |
ACCATGAGTAATGAATTCCA+TGG | + | Chr5:40597005-40597024 | MsG0580026611.01.T01:three_prime_UTR | 35.0% | |
AGTAGTCAAATCCTCCAATT+TGG | - | Chr5:40596172-40596191 | None:intergenic | 35.0% | |
ATCTGGGTATTTCCAATCAT+TGG | - | Chr5:40596735-40596754 | None:intergenic | 35.0% | |
ATTTGACTACTAATGGTGTC+AGG | + | Chr5:40596181-40596200 | MsG0580026611.01.T01:CDS | 35.0% | |
CTTTGCATTGTACCTTTCAT+TGG | + | Chr5:40597109-40597128 | MsG0580026611.01.T01:three_prime_UTR | 35.0% | |
GAATTGAGCGATTCAAATAG+TGG | - | Chr5:40595760-40595779 | None:intergenic | 35.0% | |
GTAGTCAAATCCTCCAATTT+GGG | - | Chr5:40596171-40596190 | None:intergenic | 35.0% | |
TAATCGAACTTCGGATATCT+TGG | + | Chr5:40596493-40596512 | MsG0580026611.01.T01:CDS | 35.0% | |
TCCATGGAATTCATTACTCA+TGG | - | Chr5:40597009-40597028 | None:intergenic | 35.0% | |
TTGGAGGATTTGACTACTAA+TGG | + | Chr5:40596174-40596193 | MsG0580026611.01.T01:CDS | 35.0% | |
TTGGATATATACTGGTATCG+TGG | + | Chr5:40595970-40595989 | MsG0580026611.01.T01:CDS | 35.0% | |
TTTGCTGCAGAAAATAGTTG+GGG | - | Chr5:40596004-40596023 | None:intergenic | 35.0% | |
! | AAAAAGAGTAACGGCTTTGA+GGG | - | Chr5:40595872-40595891 | None:intergenic | 35.0% |
! | AAAGTTTGTTTCCAAGTCGT+GGG | + | Chr5:40595732-40595751 | MsG0580026611.01.T01:CDS | 35.0% |
! | GAAGAATGCAAGACTTTTAG+AGG | + | Chr5:40596850-40596869 | MsG0580026611.01.T01:CDS | 35.0% |
! | GTTTTGCTGCAGAAAATAGT+TGG | - | Chr5:40596006-40596025 | None:intergenic | 35.0% |
! | TTTGACTACTAATGGTGTCA+GGG | + | Chr5:40596182-40596201 | MsG0580026611.01.T01:CDS | 35.0% |
!! | AATCGGTTTAGTTTGAAGCA+AGG | - | Chr5:40595916-40595935 | None:intergenic | 35.0% |
!! | CGTTTTTGACTATGATTGAC+AGG | + | Chr5:40596679-40596698 | MsG0580026611.01.T01:intron | 35.0% |
!! | CTTCAAACTAAACCGATTTG+TGG | + | Chr5:40595918-40595937 | MsG0580026611.01.T01:CDS | 35.0% |
!! | GCTTTGATCAAGTTGGATAA+GGG | - | Chr5:40596243-40596262 | None:intergenic | 35.0% |
!!! | TCAAAGCCGTTACTCTTTTT+TGG | + | Chr5:40595872-40595891 | MsG0580026611.01.T01:CDS | 35.0% |
AAAGAATGTCACGGAGAACA+AGG | - | Chr5:40596107-40596126 | None:intergenic | 40.0% | |
AAGAATGTCACGGAGAACAA+GGG | - | Chr5:40596106-40596125 | None:intergenic | 40.0% | |
ACTTGTGGTCCTCAAATTGT+GGG | + | Chr5:40596026-40596045 | MsG0580026611.01.T01:CDS | 40.0% | |
ATCATGTTCCTGAGTGTGTT+AGG | + | Chr5:40596753-40596772 | MsG0580026611.01.T01:CDS | 40.0% | |
GAAGTTTCTCACTCTGTCTA+AGG | + | Chr5:40596302-40596321 | MsG0580026611.01.T01:CDS | 40.0% | |
GTTCCTCAAATACAATGCAG+AGG | + | Chr5:40596894-40596913 | MsG0580026611.01.T01:CDS | 40.0% | |
TGTTTATGGGTGTCCCAAAT+TGG | + | Chr5:40596155-40596174 | MsG0580026611.01.T01:CDS | 40.0% | |
TTTCTGCAGCAAAACACTTG+TGG | + | Chr5:40596011-40596030 | MsG0580026611.01.T01:CDS | 40.0% | |
! | CAAAGTTTGTTTCCAAGTCG+TGG | + | Chr5:40595731-40595750 | MsG0580026611.01.T01:CDS | 40.0% |
! | TTAGTTTGAAGCAAGGCTTC+CGG | - | Chr5:40595909-40595928 | None:intergenic | 40.0% |
! | TTCATCATGTCTGTTGACTG+TGG | - | Chr5:40595646-40595665 | None:intergenic | 40.0% |
! | TTGACTACTAATGGTGTCAG+GGG | + | Chr5:40596183-40596202 | MsG0580026611.01.T01:CDS | 40.0% |
!! | AAAAGAGTAACGGCTTTGAG+GGG | - | Chr5:40595871-40595890 | None:intergenic | 40.0% |
!! | CTTTGTTCTGAAAGCATCTC+TGG | - | Chr5:40595716-40595735 | None:intergenic | 40.0% |
!! | GGCTTTGATCAAGTTGGATA+AGG | - | Chr5:40596244-40596263 | None:intergenic | 40.0% |
!! | GGTATTGGCTTTGATCAAGT+TGG | - | Chr5:40596250-40596269 | None:intergenic | 40.0% |
!! | GTTTTGCTGCTTCCACAAAT+CGG | - | Chr5:40595933-40595952 | None:intergenic | 40.0% |
!! | TTCTGAAAGCATCTCTGGTT+CGG | - | Chr5:40595711-40595730 | None:intergenic | 40.0% |
ACACACTCAGGAACATGATC+TGG | - | Chr5:40596752-40596771 | None:intergenic | 45.0% | |
AGATGAGACCTAACACACTC+AGG | - | Chr5:40596764-40596783 | None:intergenic | 45.0% | |
ATCCCTACTGTCGATGTTGA+GGG | - | Chr5:40595782-40595801 | None:intergenic | 45.0% | |
ATTCCCTCAACATCGACAGT+AGG | + | Chr5:40595776-40595795 | MsG0580026611.01.T01:CDS | 45.0% | |
CACACTCAGGAACATGATCT+GGG | - | Chr5:40596751-40596770 | None:intergenic | 45.0% | |
CACTTGTGGTCCTCAAATTG+TGG | + | Chr5:40596025-40596044 | MsG0580026611.01.T01:CDS | 45.0% | |
CGACCTCTGCATTGTATTTG+AGG | - | Chr5:40596900-40596919 | None:intergenic | 45.0% | |
TATCCCTACTGTCGATGTTG+AGG | - | Chr5:40595783-40595802 | None:intergenic | 45.0% | |
TTACATGTGGGAGAGATCCT+TGG | - | Chr5:40596950-40596969 | None:intergenic | 45.0% | |
TTATGGGTGTCCCAAATTGG+AGG | + | Chr5:40596158-40596177 | MsG0580026611.01.T01:CDS | 45.0% | |
TTCCCTCAACATCGACAGTA+GGG | + | Chr5:40595777-40595796 | MsG0580026611.01.T01:CDS | 45.0% | |
TTGACTATGATTGACAGGGG+AGG | + | Chr5:40596684-40596703 | MsG0580026611.01.T01:intron | 45.0% | |
! | AAATAGTGGAACCCACGACT+TGG | - | Chr5:40595746-40595765 | None:intergenic | 45.0% |
! | ATCATGTCTGTTGACTGTGG+TGG | - | Chr5:40595643-40595662 | None:intergenic | 45.0% |
!! | GGTTTTGTGTTGTGTGCAGT+TGG | + | Chr5:40596407-40596426 | MsG0580026611.01.T01:intron | 45.0% |
!!! | AGAACAAGGGTTTTGAGCGA+GGG | - | Chr5:40596093-40596112 | None:intergenic | 45.0% |
!! | CATAATAATATTTATAATAA+TGG | - | Chr5:40596372-40596391 | None:intergenic | 5.0% |
GCTGCAGAAAATAGTTGGGG+AGG | - | Chr5:40596001-40596020 | None:intergenic | 50.0% | |
GGGAGAGATCCTTGGAAAAG+AGG | - | Chr5:40596942-40596961 | None:intergenic | 50.0% | |
TATCCAATTCCTTGACGCCG+CGG | - | Chr5:40595957-40595976 | None:intergenic | 50.0% | |
! | TAATGGTGTCAGGGGAACGT+TGG | + | Chr5:40596191-40596210 | MsG0580026611.01.T01:CDS | 50.0% |
!!! | GAGAACAAGGGTTTTGAGCG+AGG | - | Chr5:40596094-40596113 | None:intergenic | 50.0% |
!! | GAGTAACGGCTTTGAGGGGA+TGG | - | Chr5:40595867-40595886 | None:intergenic | 55.0% |
GTGGAAGCAGCAAAACGCCG+CGG | + | Chr5:40595937-40595956 | MsG0580026611.01.T01:CDS | 60.0% | |
ACGCCGCGGCGTCAAGGAAT+TGG | + | Chr5:40595951-40595970 | MsG0580026611.01.T01:CDS | 65.0% | |
AGCAAAACGCCGCGGCGTCA+AGG | + | Chr5:40595945-40595964 | MsG0580026611.01.T01:CDS | 65.0% | |
!! | ACGGCTTTGAGGGGATGGCG+TGG | - | Chr5:40595862-40595881 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 40595621 | 40597139 | 40595621 | ID=MsG0580026611.01;Name=MsG0580026611.01 |
Chr5 | mRNA | 40595621 | 40597139 | 40595621 | ID=MsG0580026611.01.T01;Parent=MsG0580026611.01;Name=MsG0580026611.01.T01;_AED=0.04;_eAED=0.04;_QI=10|1|1|1|1|1|3|154|383 |
Chr5 | exon | 40595621 | 40596323 | 40595621 | ID=MsG0580026611.01.T01:exon:37350;Parent=MsG0580026611.01.T01 |
Chr5 | exon | 40596426 | 40596599 | 40596426 | ID=MsG0580026611.01.T01:exon:37351;Parent=MsG0580026611.01.T01 |
Chr5 | exon | 40596701 | 40597139 | 40596701 | ID=MsG0580026611.01.T01:exon:37352;Parent=MsG0580026611.01.T01 |
Chr5 | five_prime_UTR | 40595621 | 40595630 | 40595621 | ID=MsG0580026611.01.T01:five_prime_utr;Parent=MsG0580026611.01.T01 |
Chr5 | CDS | 40595631 | 40596323 | 40595631 | ID=MsG0580026611.01.T01:cds;Parent=MsG0580026611.01.T01 |
Chr5 | CDS | 40596426 | 40596599 | 40596426 | ID=MsG0580026611.01.T01:cds;Parent=MsG0580026611.01.T01 |
Chr5 | CDS | 40596701 | 40596985 | 40596701 | ID=MsG0580026611.01.T01:cds;Parent=MsG0580026611.01.T01 |
Chr5 | three_prime_UTR | 40596986 | 40597139 | 40596986 | ID=MsG0580026611.01.T01:three_prime_utr;Parent=MsG0580026611.01.T01 |
Gene Sequence |
Protein sequence |