AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030727.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030727.01.T01 MTR_6g011460 77.482 413 86 4 19 425 15 426 0.0 630
MsG0680030727.01.T01 MTR_4g039440 60.138 434 135 9 4 423 6 415 1.74e-168 479
MsG0680030727.01.T01 MTR_1g085120 59.441 429 152 8 6 422 130 548 3.36e-158 458
MsG0680030727.01.T01 MTR_1g085120 59.620 421 146 8 18 422 61 473 3.58e-158 455
MsG0680030727.01.T01 MTR_7g055943 57.282 412 161 6 26 424 16 425 2.91e-147 426
MsG0680030727.01.T01 MTR_6g022500 56.378 392 156 7 40 421 91 477 7.46e-135 396
MsG0680030727.01.T01 MTR_6g022360 52.093 430 172 9 1 419 1 407 1.68e-129 380
MsG0680030727.01.T01 MTR_1089s0010 52.243 379 172 5 49 422 7 381 2.01e-119 353
MsG0680030727.01.T01 MTR_1g066830 52.062 388 171 6 44 419 2 386 4.75e-118 350
MsG0680030727.01.T01 MTR_1g085120 57.975 326 118 6 18 329 148 468 2.16e-110 333
MsG0680030727.01.T01 MTR_5g058100 52.344 384 168 10 49 422 8 386 3.54e-109 327
MsG0680030727.01.T01 MTR_5g058000 52.910 378 161 9 49 419 7 374 7.65e-108 323
MsG0680030727.01.T01 MTR_6g022520 58.438 320 117 6 116 423 1 316 2.61e-105 315
MsG0680030727.01.T01 MTR_5g073420 48.684 380 176 9 49 419 10 379 2.68e-104 314
MsG0680030727.01.T01 MTR_6g040270 49.733 374 177 6 52 418 10 379 3.53e-103 311
MsG0680030727.01.T01 MTR_6g044572 47.573 412 154 10 49 421 1 389 7.71e-102 308
MsG0680030727.01.T01 MTR_6g044560 47.017 419 160 11 42 421 170 565 7.93e-100 309
MsG0680030727.01.T01 MTR_1g108820 43.511 393 184 15 49 418 7 384 1.24e-76 243
MsG0680030727.01.T01 MTR_5g061680 45.513 312 137 8 49 354 10 294 1.72e-75 238
MsG0680030727.01.T01 MTR_7g026500 39.196 398 197 13 50 419 14 394 7.49e-74 236
MsG0680030727.01.T01 MTR_6g045333 39.286 392 211 10 49 419 60 445 4.54e-69 226
MsG0680030727.01.T01 MTR_0009s0080 40.113 354 193 7 52 389 20 370 8.40e-67 219
MsG0680030727.01.T01 MTR_3g095600 41.240 371 129 13 49 411 3 292 1.23e-66 214
MsG0680030727.01.T01 MTR_5g045510 37.179 390 205 10 49 423 11 375 8.16e-66 215
MsG0680030727.01.T01 MTR_5g007410 36.074 377 221 7 52 412 28 400 2.14e-63 211
MsG0680030727.01.T01 MTR_5g045170 37.811 402 209 15 42 419 6 390 6.62e-63 208
MsG0680030727.01.T01 MTR_5g073370 38.481 395 204 15 50 422 5 382 2.68e-60 201
MsG0680030727.01.T01 MTR_1g108800 41.667 384 160 13 49 418 7 340 2.17e-58 194
MsG0680030727.01.T01 MTR_3g071850 36.269 386 225 8 49 416 23 405 4.47e-58 204
MsG0680030727.01.T01 MTR_2g036470 35.115 393 237 9 42 419 6 395 4.69e-57 192
MsG0680030727.01.T01 MTR_5g039490 35.484 403 216 12 32 419 2 375 1.99e-54 185
MsG0680030727.01.T01 MTR_7g098510 36.658 401 229 13 34 420 2 391 6.11e-53 182
MsG0680030727.01.T01 MTR_1g108820 42.434 304 140 13 49 329 7 298 2.59e-50 174
MsG0680030727.01.T01 MTR_5g039450 32.300 387 208 10 49 417 5 355 6.73e-50 173
MsG0680030727.01.T01 MTR_0543s0010 36.104 385 210 14 50 419 86 449 1.80e-49 174
MsG0680030727.01.T01 MTR_7g056433 33.933 389 228 11 50 420 12 389 3.62e-49 172
MsG0680030727.01.T01 MTR_3g023630 35.246 366 216 9 49 403 7 362 1.57e-48 169
MsG0680030727.01.T01 MTR_5g039470 35.522 335 190 9 66 382 1 327 2.66e-48 168
MsG0680030727.01.T01 MTR_0492s0020 36.620 355 190 13 50 389 86 420 3.59e-48 170
MsG0680030727.01.T01 MTR_7g056287 36.458 384 215 14 50 419 3 371 6.64e-48 168
MsG0680030727.01.T01 MTR_5g076150 46.460 226 94 7 151 351 4 227 1.25e-46 160
MsG0680030727.01.T01 MTR_2g007450 33.726 424 214 14 49 421 15 422 9.21e-46 164
MsG0680030727.01.T01 MTR_7g056277 36.198 384 216 14 50 419 259 627 3.12e-45 166
MsG0680030727.01.T01 MTR_5g031970 31.783 387 212 9 42 417 8 353 3.22e-44 158
MsG0680030727.01.T01 MTR_3g108560 32.558 387 226 13 50 419 20 388 1.20e-43 157
MsG0680030727.01.T01 MTR_3g105060 32.908 392 212 13 49 420 13 373 1.91e-43 156
MsG0680030727.01.T01 MTR_3g107100 34.000 400 223 12 50 420 11 398 2.93e-43 156
MsG0680030727.01.T01 MTR_1g041245 34.257 397 216 15 49 420 10 386 3.83e-43 155
MsG0680030727.01.T01 MTR_3g107160 31.750 400 240 12 41 422 1 385 3.92e-43 155
MsG0680030727.01.T01 MTR_7g007080 31.633 392 227 13 50 418 4 377 3.96e-43 155
MsG0680030727.01.T01 MTR_6g033095 42.678 239 78 4 164 398 11 194 5.35e-43 150
MsG0680030727.01.T01 MTR_7g098570 35.897 351 203 11 49 386 19 360 1.74e-42 156
MsG0680030727.01.T01 MTR_5g063950 32.275 378 210 9 55 417 13 359 3.86e-42 152
MsG0680030727.01.T01 MTR_7g033915 32.105 380 224 12 49 419 10 364 7.20e-42 152
MsG0680030727.01.T01 MTR_5g083890 35.279 377 196 15 50 386 6 374 9.28e-42 154
MsG0680030727.01.T01 MTR_3g036250 32.648 389 213 15 49 417 4 363 2.17e-41 150
MsG0680030727.01.T01 MTR_5g033200 52.695 167 70 5 250 411 11 173 3.05e-41 144
MsG0680030727.01.T01 MTR_3g108150 33.333 387 228 12 50 419 13 386 3.21e-41 150
MsG0680030727.01.T01 MTR_7g115270 30.750 400 233 13 50 417 12 399 4.17e-41 150
MsG0680030727.01.T01 MTR_3g095640 49.390 164 75 4 44 199 12 175 8.74e-41 143
MsG0680030727.01.T01 MTR_7g088260 32.412 398 240 13 37 420 80 462 8.90e-41 151
MsG0680030727.01.T01 MTR_3g040700 34.670 349 185 15 49 378 42 366 9.99e-41 150
MsG0680030727.01.T01 MTR_5g008920 32.481 391 233 14 49 424 11 385 1.30e-40 149
MsG0680030727.01.T01 MTR_7g098480 34.048 373 210 14 34 387 2 357 1.66e-40 150
MsG0680030727.01.T01 MTR_5g073340 34.568 324 165 9 49 355 7 300 1.81e-40 146
MsG0680030727.01.T01 MTR_7g075820 32.836 402 222 16 50 418 6 392 1.98e-40 149
MsG0680030727.01.T01 MTR_7g032380 31.948 385 211 13 49 420 10 356 2.74e-40 147
MsG0680030727.01.T01 MTR_7g114710 32.824 393 203 13 49 420 12 364 4.43e-40 147
MsG0680030727.01.T01 MTR_1377s0010 54.286 140 61 2 258 397 2 138 1.11e-39 139
MsG0680030727.01.T01 MTR_5g065100 33.867 375 199 13 55 419 13 348 3.32e-39 146
MsG0680030727.01.T01 MTR_1g053025 31.750 400 228 14 49 417 1 386 9.68e-39 144
MsG0680030727.01.T01 MTR_3g095630 48.315 178 84 4 248 421 14 187 2.08e-38 137
MsG0680030727.01.T01 MTR_7g033990 30.829 386 225 11 49 412 10 375 2.95e-38 143
MsG0680030727.01.T01 MTR_2g007400 30.583 412 235 15 45 420 7 403 4.40e-38 142
MsG0680030727.01.T01 MTR_3g107120 31.990 397 224 14 50 417 9 388 4.35e-37 140
MsG0680030727.01.T01 MTR_3g082890 33.687 377 206 13 50 394 97 461 9.94e-37 140
MsG0680030727.01.T01 MTR_6g022390 52.672 131 55 1 48 171 3 133 1.36e-36 131
MsG0680030727.01.T01 MTR_3g099830 32.071 396 209 14 49 418 11 372 3.38e-35 134
MsG0680030727.01.T01 MTR_5g008950 29.688 384 240 12 52 422 1 367 3.56e-35 134
MsG0680030727.01.T01 MTR_2g005990 33.333 405 219 16 49 418 5 393 3.57e-35 134
MsG0680030727.01.T01 MTR_5g058350 47.849 186 71 4 49 234 7 166 1.96e-34 126
MsG0680030727.01.T01 MTR_2g008310 30.633 395 227 14 49 420 1 371 8.48e-34 130
MsG0680030727.01.T01 MTR_1g107385 30.575 435 225 16 36 418 12 421 1.77e-33 130
MsG0680030727.01.T01 MTR_4g098590 31.405 363 212 10 52 386 1 354 2.82e-33 129
MsG0680030727.01.T01 MTR_7g032370 30.645 372 224 12 62 420 2 352 3.06e-33 128
MsG0680030727.01.T01 MTR_3g082890 31.401 414 203 14 50 394 17 418 6.06e-33 129
MsG0680030727.01.T01 MTR_5g054920 41.489 188 85 6 221 393 7 184 1.98e-32 122
MsG0680030727.01.T01 MTR_7g034115 31.680 363 210 14 48 389 9 354 1.99e-32 126
MsG0680030727.01.T01 MTR_2g007500 31.792 346 185 9 49 366 13 335 2.01e-32 125
MsG0680030727.01.T01 MTR_1g059860 32.026 306 160 9 118 378 8 310 3.90e-32 124
MsG0680030727.01.T01 MTR_2g008320 30.127 395 235 16 49 420 51 427 1.56e-31 125
MsG0680030727.01.T01 MTR_7g056430 29.810 369 188 14 50 389 9 335 2.08e-31 127
MsG0680030727.01.T01 MTR_3g467400 28.894 398 227 11 48 420 1 367 2.17e-31 123
MsG0680030727.01.T01 MTR_7g056420 29.810 369 188 14 50 389 9 335 2.26e-31 127
MsG0680030727.01.T01 MTR_7g060470 32.891 377 209 12 50 394 3 367 3.01e-31 123
MsG0680030727.01.T01 MTR_7g034120 33.540 322 178 14 120 421 4 309 3.02e-31 122
MsG0680030727.01.T01 MTR_7g083740 29.049 389 220 13 49 419 16 366 4.74e-31 122
MsG0680030727.01.T01 MTR_7g056020 30.851 376 212 14 50 406 16 362 4.12e-30 123
MsG0680030727.01.T01 MTR_3g087260 35.789 285 151 11 155 419 184 456 8.15e-30 120
MsG0680030727.01.T01 MTR_3g087260 35.638 188 95 6 50 233 12 177 5.49e-16 80.1
MsG0680030727.01.T01 MTR_2g007360 30.923 401 207 16 49 418 11 372 9.02e-30 119
MsG0680030727.01.T01 MTR_3g026920 29.454 421 211 13 48 417 17 402 9.76e-30 119
MsG0680030727.01.T01 MTR_3g108560 32.881 295 166 11 50 329 20 297 2.25e-29 117
MsG0680030727.01.T01 MTR_7g007340 31.768 362 179 16 49 386 12 329 2.59e-29 117
MsG0680030727.01.T01 MTR_8g077460 28.133 391 236 14 50 420 10 375 3.90e-27 112
MsG0680030727.01.T01 MTR_5g012840 29.091 330 168 13 74 389 13 290 4.45e-27 110
MsG0680030727.01.T01 MTR_7g034110 28.571 364 197 13 49 397 10 325 6.92e-26 107
MsG0680030727.01.T01 MTR_7g021990 30.446 381 215 15 49 400 47 406 8.11e-26 108
MsG0680030727.01.T01 MTR_7g007370 30.704 355 174 14 49 385 16 316 1.12e-25 107
MsG0680030727.01.T01 MTR_7g021950 30.790 367 204 15 49 386 47 392 2.06e-25 108
MsG0680030727.01.T01 MTR_0571s0010 59.756 82 32 1 50 131 32 112 6.05e-25 99.0
MsG0680030727.01.T01 MTR_3g109982 40.860 186 100 4 50 232 13 191 6.47e-25 108
MsG0680030727.01.T01 MTR_3g109982 34.100 261 148 11 167 412 217 468 3.02e-24 105
MsG0680030727.01.T01 MTR_6g022410 55.319 94 37 2 329 420 17 107 1.11e-24 98.2
MsG0680030727.01.T01 MTR_3g110010 40.860 186 100 4 50 232 13 191 1.21e-24 107
MsG0680030727.01.T01 MTR_3g110010 33.333 183 108 7 167 340 217 394 1.79e-11 66.6
MsG0680030727.01.T01 MTR_7g022105 30.789 380 215 15 49 400 48 407 2.64e-24 104
MsG0680030727.01.T01 MTR_5g061410 30.420 286 160 8 55 329 10 267 9.09e-23 97.4
MsG0680030727.01.T01 MTR_8g085430 35.678 199 113 6 46 233 7 201 1.00e-22 98.6
MsG0680030727.01.T01 MTR_4g080610 28.643 398 211 15 52 425 14 362 1.59e-22 98.6
MsG0680030727.01.T01 MTR_8g467800 26.258 457 244 16 43 421 13 454 7.05e-22 97.8
MsG0680030727.01.T01 MTR_7g056447 37.433 187 109 5 45 228 4 185 1.05e-21 95.1
MsG0680030727.01.T01 MTR_5g013500 28.109 402 213 18 50 420 9 365 2.68e-21 95.1
MsG0680030727.01.T01 MTR_8g062270 25.877 456 236 17 49 419 15 453 5.16e-21 95.1
MsG0680030727.01.T01 MTR_3g071790 33.152 184 111 4 209 380 19 202 2.19e-20 89.0
MsG0680030727.01.T01 MTR_2g007550 26.455 378 211 10 49 417 13 332 3.74e-20 91.7
MsG0680030727.01.T01 MTR_4g032730 26.609 466 249 16 42 419 6 466 5.94e-20 92.0
MsG0680030727.01.T01 MTR_5g024060 43.651 126 66 2 288 412 79 200 7.15e-20 89.0
MsG0680030727.01.T01 MTR_8g014260 24.891 458 235 14 50 420 16 451 1.29e-19 90.9
MsG0680030727.01.T01 MTR_4g056030 26.087 414 218 14 50 386 9 411 3.65e-18 86.7
MsG0680030727.01.T01 MTR_4g130200 23.383 402 229 10 36 396 6 369 3.28e-17 83.2
MsG0680030727.01.T01 MTR_7g034090 31.452 248 113 9 50 244 4 247 3.78e-17 83.6
MsG0680030727.01.T01 MTR_7g034090 33.951 162 89 7 270 422 162 314 1.10e-11 66.6
MsG0680030727.01.T01 MTR_8g062080 25.231 432 253 17 50 420 23 445 5.13e-17 83.2
MsG0680030727.01.T01 MTR_3g114200 37.241 145 82 4 50 190 19 158 5.88e-17 78.2
MsG0680030727.01.T01 MTR_8g468840 26.087 414 226 14 48 386 12 420 8.54e-17 82.4
MsG0680030727.01.T01 MTR_8g445780 26.042 384 196 12 50 363 13 378 1.13e-16 81.6
MsG0680030727.01.T01 MTR_8g468810 26.609 466 256 15 32 420 7 463 1.26e-16 82.0
MsG0680030727.01.T01 MTR_8g062310 26.168 428 245 17 45 420 20 428 1.44e-16 81.6
MsG0680030727.01.T01 MTR_5g092960 25.000 468 257 17 34 419 6 461 1.87e-16 81.6
MsG0680030727.01.T01 MTR_2g083840 25.499 451 242 19 50 420 21 457 2.49e-16 81.3
MsG0680030727.01.T01 MTR_4g056020 26.277 411 221 14 50 386 9 411 2.83e-16 80.9
MsG0680030727.01.T01 MTR_1g038710 26.492 419 216 14 50 386 19 427 3.17e-16 80.9
MsG0680030727.01.T01 MTR_7g033945 36.905 168 92 5 49 207 10 172 4.00e-16 76.6
MsG0680030727.01.T01 MTR_5g073400 41.964 112 60 3 122 231 3 111 4.73e-16 75.1
MsG0680030727.01.T01 MTR_5g084070 28.935 432 225 15 49 417 12 424 8.47e-16 79.3
MsG0680030727.01.T01 MTR_4g080590 23.404 423 244 14 34 386 7 419 1.97e-15 78.2
MsG0680030727.01.T01 MTR_5g080710 26.077 441 259 11 31 412 14 446 2.43e-15 78.2
MsG0680030727.01.T01 MTR_4g134150 29.614 233 139 8 50 275 14 228 3.02e-15 75.1
MsG0680030727.01.T01 MTR_7g056280 31.720 186 100 7 221 386 368 546 5.44e-15 77.4
MsG0680030727.01.T01 MTR_7g056280 32.240 183 107 6 52 224 8 183 5.29e-13 71.2
MsG0680030727.01.T01 MTR_8g467790 33.824 204 102 11 49 231 147 338 6.34e-15 77.0
MsG0680030727.01.T01 MTR_2g047858 24.378 402 225 11 50 386 115 502 9.03e-15 76.6
MsG0680030727.01.T01 MTR_2g007090 33.047 233 125 9 194 419 85 293 1.28e-14 74.3
MsG0680030727.01.T01 MTR_8g469020 32.735 223 115 10 50 243 7 223 1.72e-14 75.5
MsG0680030727.01.T01 MTR_8g467800 32.487 197 124 6 42 232 12 205 1.98e-14 74.7
MsG0680030727.01.T01 MTR_1g090900 33.520 179 94 7 50 216 11 176 5.37e-14 70.9
MsG0680030727.01.T01 MTR_6g029350 30.415 217 121 8 221 424 3 202 2.24e-13 69.7
MsG0680030727.01.T01 MTR_8g058965 31.081 222 130 8 44 243 7 227 2.44e-13 72.0
MsG0680030727.01.T01 MTR_8g070950 31.633 196 114 8 50 234 15 201 3.19e-13 71.6
MsG0680030727.01.T01 MTR_8g468760 26.744 430 247 21 44 419 3 418 7.70e-13 70.1
MsG0680030727.01.T01 MTR_5g021550 34.532 139 78 4 50 179 19 153 7.84e-13 66.6
MsG0680030727.01.T01 MTR_2g020170 37.190 121 71 4 50 169 22 138 1.49e-12 65.1
MsG0680030727.01.T01 MTR_7g098590 42.424 99 49 3 49 147 17 107 1.51e-12 65.1
MsG0680030727.01.T01 MTR_7g023310 29.064 203 127 7 39 233 15 208 1.89e-12 69.3
MsG0680030727.01.T01 MTR_5g040850 23.775 408 242 15 50 400 7 402 2.13e-12 68.9
MsG0680030727.01.T01 MTR_1g090883 32.653 196 103 8 50 229 19 201 3.51e-12 67.8
MsG0680030727.01.T01 MTR_2g020180 36.190 105 57 2 288 389 91 188 5.74e-12 65.5
MsG0680030727.01.T01 MTR_4g093690 30.653 199 103 8 50 229 18 200 6.88e-12 66.2
MsG0680030727.01.T01 MTR_3g019240 31.771 192 116 6 32 216 10 193 7.50e-12 67.0
MsG0680030727.01.T01 MTR_3g107940 37.383 107 62 2 284 385 82 188 9.18e-12 66.6
MsG0680030727.01.T01 MTR_3g107140 31.658 199 116 6 67 250 9 202 1.01e-11 64.3
MsG0680030727.01.T01 MTR_8g468910 30.671 313 175 15 28 313 26 323 1.55e-11 66.2
MsG0680030727.01.T01 MTR_8g468810 31.915 235 139 9 32 250 7 236 3.16e-11 64.7
MsG0680030727.01.T01 MTR_8g468810 30.698 215 135 6 32 234 7 219 3.18e-11 64.7
MsG0680030727.01.T01 MTR_8g468810 31.915 235 139 9 32 250 7 236 3.30e-11 64.7
MsG0680030727.01.T01 MTR_8g468810 30.698 215 135 6 32 234 7 219 3.85e-11 64.7
MsG0680030727.01.T01 MTR_3g048290 24.221 417 269 16 34 419 7 407 5.32e-11 64.7
MsG0680030727.01.T01 MTR_6g061720 52.308 65 28 2 55 117 13 76 6.54e-11 58.5
MsG0680030727.01.T01 MTR_7g081290 33.333 111 65 3 288 390 123 232 7.20e-11 62.8
MsG0680030727.01.T01 MTR_7g033940 33.333 117 71 4 47 162 91 201 7.35e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030727.01.T01 AT4G00160 30.405 444 225 21 50 424 16 444 6.04e-27 112
MsG0680030727.01.T01 AT5G56420 29.128 436 225 17 50 420 6 422 5.52e-25 106
MsG0680030727.01.T01 AT5G56420 29.128 436 225 17 50 420 6 422 5.52e-25 106
MsG0680030727.01.T01 AT5G56420 29.128 436 225 17 50 420 6 422 5.52e-25 106
MsG0680030727.01.T01 AT3G50710 25.682 440 246 12 49 420 1 427 4.25e-24 103
MsG0680030727.01.T01 AT1G55030 27.107 439 230 17 31 404 4 417 3.00e-22 98.6
MsG0680030727.01.T01 AT5G38590 29.899 398 204 14 49 386 1 383 3.06e-22 98.6
MsG0680030727.01.T01 AT4G26340 27.460 437 234 17 49 420 1 419 3.38e-22 98.6
MsG0680030727.01.T01 AT3G52680 28.281 442 231 16 50 421 21 446 5.82e-22 98.2
MsG0680030727.01.T01 AT5G22610 24.942 429 248 13 50 417 18 433 7.39e-22 97.8
MsG0680030727.01.T01 AT1G55030 27.273 429 225 16 41 404 1 407 1.38e-21 96.7
MsG0680030727.01.T01 AT5G56820 28.463 397 215 12 50 393 15 395 1.48e-20 93.6
MsG0680030727.01.T01 AT5G41840 33.188 229 127 6 50 257 14 237 2.36e-20 94.0
MsG0680030727.01.T01 AT4G10400 27.381 420 244 13 49 419 1 408 1.08e-19 90.9
MsG0680030727.01.T01 AT4G10400 27.381 420 244 13 49 419 1 408 1.08e-19 90.9
MsG0680030727.01.T01 AT4G10400 27.381 420 244 13 49 419 1 408 1.08e-19 90.9
MsG0680030727.01.T01 AT1G06630 26.420 405 207 15 50 382 12 397 1.69e-19 90.5
MsG0680030727.01.T01 AT1G06630 26.420 405 207 15 50 382 12 397 1.69e-19 90.5
MsG0680030727.01.T01 AT1G06630 26.420 405 207 15 50 382 12 397 1.69e-19 90.5
MsG0680030727.01.T01 AT1G06630 26.420 405 207 15 50 382 12 397 1.69e-19 90.5
MsG0680030727.01.T01 AT1G06630 26.420 405 207 15 50 382 21 406 1.81e-19 90.5
MsG0680030727.01.T01 AT3G49030 25.885 452 252 15 38 419 2 440 3.23e-19 89.7
MsG0680030727.01.T01 AT4G13965 28.535 389 219 11 49 385 9 390 4.22e-19 89.4
MsG0680030727.01.T01 AT1G06630 27.966 354 173 13 50 331 12 355 7.90e-19 87.8
MsG0680030727.01.T01 AT1G06630 27.966 354 173 13 50 331 12 355 7.90e-19 87.8
MsG0680030727.01.T01 AT2G04230 27.404 416 224 15 38 385 2 407 8.89e-19 88.6
MsG0680030727.01.T01 AT4G22280 26.039 361 197 9 49 347 1 353 8.97e-19 88.2
MsG0680030727.01.T01 AT1G06630 27.920 351 171 13 50 328 12 352 1.11e-18 88.6
MsG0680030727.01.T01 AT5G44940 27.136 398 238 15 50 420 5 377 1.52e-18 87.0
MsG0680030727.01.T01 AT5G62970 25.828 453 249 16 49 419 1 448 1.73e-18 87.8
MsG0680030727.01.T01 AT5G22670 34.759 187 110 6 50 232 11 189 1.95e-18 87.4
MsG0680030727.01.T01 AT4G15060 33.163 196 112 6 49 233 25 212 2.36e-18 87.0
MsG0680030727.01.T01 AT5G56810 24.533 428 260 13 50 421 15 435 2.93e-18 87.0
MsG0680030727.01.T01 AT3G58880 32.540 252 145 10 48 282 1 244 3.28e-18 87.0
MsG0680030727.01.T01 AT5G38590 31.667 240 139 7 49 275 1 228 4.38e-18 84.7
MsG0680030727.01.T01 AT4G27050 26.350 463 234 18 50 419 4 452 4.67e-18 86.3
MsG0680030727.01.T01 AT4G27050 26.350 463 234 18 50 419 4 452 4.67e-18 86.3
MsG0680030727.01.T01 AT4G27050 26.350 463 234 18 50 419 4 452 4.67e-18 86.3
MsG0680030727.01.T01 AT4G27050 26.350 463 234 18 50 419 4 452 4.67e-18 86.3
MsG0680030727.01.T01 AT4G27050 26.350 463 234 18 50 419 4 452 4.67e-18 86.3
MsG0680030727.01.T01 AT4G15060 33.163 196 112 6 49 233 171 358 5.67e-18 86.7
MsG0680030727.01.T01 AT1G32375 24.826 431 256 12 49 420 1 422 1.05e-17 85.1
MsG0680030727.01.T01 AT1G32375 24.826 431 256 12 49 420 1 422 1.05e-17 85.1
MsG0680030727.01.T01 AT3G60040 25.747 435 218 17 50 399 13 427 1.75e-17 85.1
MsG0680030727.01.T01 AT5G56370 25.346 434 247 12 49 419 1 420 1.92e-17 84.3
MsG0680030727.01.T01 AT5G56370 25.346 434 247 12 49 419 1 420 1.92e-17 84.3
MsG0680030727.01.T01 AT3G58860 26.218 431 223 17 49 400 6 420 2.39e-17 84.3
MsG0680030727.01.T01 AT3G60040 25.747 435 218 17 50 399 232 646 2.43e-17 85.1
MsG0680030727.01.T01 AT3G60040 25.747 435 218 17 50 399 233 647 2.43e-17 85.1
MsG0680030727.01.T01 AT3G60040 25.747 435 218 17 50 399 232 646 2.52e-17 84.7
MsG0680030727.01.T01 AT3G60040 25.747 435 218 17 50 399 230 644 2.63e-17 84.7
MsG0680030727.01.T01 AT1G66290 23.922 464 249 17 33 417 12 450 2.75e-17 84.0
MsG0680030727.01.T01 AT4G00320 28.836 378 157 17 44 325 9 370 3.02e-17 84.3
MsG0680030727.01.T01 AT3G51530 29.032 403 201 17 50 385 30 414 3.92e-17 83.6
MsG0680030727.01.T01 AT5G56560 25.995 427 245 16 51 420 6 418 3.97e-17 83.2
MsG0680030727.01.T01 AT5G22610 31.122 196 121 4 50 236 18 208 4.44e-17 83.6
MsG0680030727.01.T01 AT1G06630 29.876 241 145 9 50 273 12 245 5.91e-17 81.6
MsG0680030727.01.T01 AT4G22280 25.664 339 185 7 49 328 1 331 7.73e-17 81.6
MsG0680030727.01.T01 AT3G49150 31.963 219 123 9 50 251 16 225 8.96e-17 82.4
MsG0680030727.01.T01 AT5G38392 34.314 204 102 8 49 230 1 194 1.48e-16 78.6
MsG0680030727.01.T01 AT5G41830 31.878 229 125 8 50 255 13 233 3.05e-16 81.3
MsG0680030727.01.T01 AT5G22720 30.846 201 122 5 50 239 23 217 3.26e-16 80.9
MsG0680030727.01.T01 AT5G53635 32.275 189 111 6 52 232 2 181 4.29e-16 80.1
MsG0680030727.01.T01 AT1G48400 30.890 191 117 6 50 230 10 195 4.86e-16 80.5
MsG0680030727.01.T01 AT1G48400 30.890 191 117 6 50 230 10 195 5.48e-16 80.1
MsG0680030727.01.T01 AT4G14103 31.658 199 116 6 50 236 8 198 7.94e-16 79.0
MsG0680030727.01.T01 AT4G14103 31.658 199 116 6 50 236 8 198 7.94e-16 79.0
MsG0680030727.01.T01 AT4G14103 31.658 199 116 6 50 236 8 198 8.81e-16 79.3
MsG0680030727.01.T01 AT3G49030 25.822 426 259 13 38 419 2 414 1.04e-15 79.0
MsG0680030727.01.T01 AT2G26860 26.961 408 218 13 49 387 1 397 1.25e-15 78.6
MsG0680030727.01.T01 AT2G26860 26.961 408 218 13 49 387 1 397 1.25e-15 78.6
MsG0680030727.01.T01 AT5G56400 26.097 433 250 14 49 420 32 455 1.29e-15 79.0
MsG0680030727.01.T01 AT2G42720 35.533 197 111 8 49 233 1 193 1.75e-15 78.6
MsG0680030727.01.T01 AT5G56690 32.812 192 114 4 52 233 4 190 1.81e-15 78.2
MsG0680030727.01.T01 AT4G00315 29.114 237 155 6 49 275 1 234 1.96e-15 78.2
MsG0680030727.01.T01 AT5G22700 29.060 234 151 6 43 271 36 259 2.42e-15 78.2
MsG0680030727.01.T01 AT5G22700 29.060 234 151 6 43 271 36 259 2.60e-15 78.2
MsG0680030727.01.T01 AT3G42770 25.342 438 233 15 55 417 4 422 2.62e-15 78.2
MsG0680030727.01.T01 AT5G44490 26.977 215 145 4 50 258 17 225 3.12e-15 77.8
MsG0680030727.01.T01 AT5G44490 26.977 215 145 4 50 258 17 225 3.35e-15 77.8
MsG0680030727.01.T01 AT1G69630 24.190 463 248 17 38 417 6 448 3.89e-15 77.4
MsG0680030727.01.T01 AT1G78750 23.256 473 253 18 35 417 3 455 3.95e-15 77.4
MsG0680030727.01.T01 AT1G78750 23.256 473 253 18 35 417 3 455 3.95e-15 77.4
MsG0680030727.01.T01 AT2G26030 32.821 195 100 7 50 229 4 182 4.60e-15 77.4
MsG0680030727.01.T01 AT2G26030 32.821 195 100 7 50 229 4 182 4.68e-15 77.0
MsG0680030727.01.T01 AT2G26030 32.821 195 100 7 50 229 4 182 4.68e-15 77.0
MsG0680030727.01.T01 AT5G22660 29.255 188 119 4 50 232 13 191 4.77e-15 76.3
MsG0680030727.01.T01 AT3G59150 33.663 202 112 8 50 236 13 207 6.08e-15 77.0
MsG0680030727.01.T01 AT5G53840 23.557 433 253 15 50 417 18 437 6.59e-15 76.6
MsG0680030727.01.T01 AT5G22700 29.004 231 149 6 46 271 2 222 6.83e-15 76.6
MsG0680030727.01.T01 AT5G22700 29.004 231 149 6 46 271 2 222 6.83e-15 76.6
MsG0680030727.01.T01 AT5G22700 29.004 231 149 6 46 271 2 222 6.83e-15 76.6
MsG0680030727.01.T01 AT5G22700 29.004 231 149 6 46 271 2 222 6.83e-15 76.6
MsG0680030727.01.T01 AT3G26922 33.186 226 129 8 42 260 7 217 1.08e-14 75.1
MsG0680030727.01.T01 AT3G26922 33.186 226 129 8 42 260 7 217 1.08e-14 75.1
MsG0680030727.01.T01 AT3G52680 34.555 191 109 6 50 232 21 203 1.10e-14 75.5
MsG0680030727.01.T01 AT3G59190 31.188 202 106 8 50 230 12 201 1.24e-14 75.5
MsG0680030727.01.T01 AT3G44060 25.000 432 244 13 55 417 4 424 1.28e-14 75.9
MsG0680030727.01.T01 AT3G59200 32.474 194 111 7 50 230 7 193 1.34e-14 75.1
MsG0680030727.01.T01 AT4G09920 31.414 191 117 4 49 232 1 184 2.01e-14 73.9
MsG0680030727.01.T01 AT4G09920 31.414 191 117 4 49 232 1 184 2.01e-14 73.9
MsG0680030727.01.T01 AT4G09920 31.414 191 117 4 49 232 1 184 2.01e-14 73.9
MsG0680030727.01.T01 AT3G59190 31.188 202 106 8 50 230 12 201 2.09e-14 75.5
MsG0680030727.01.T01 AT5G38396 34.653 202 104 8 49 230 1 194 2.10e-14 75.1
MsG0680030727.01.T01 AT4G09920 31.414 191 117 4 49 232 1 184 2.38e-14 73.9
MsG0680030727.01.T01 AT4G09920 31.414 191 117 4 49 232 1 184 2.38e-14 73.9
MsG0680030727.01.T01 AT5G22660 29.787 188 118 4 50 232 13 191 2.62e-14 75.1
MsG0680030727.01.T01 AT5G53640 27.805 205 134 5 33 232 3 198 3.11e-14 72.0
MsG0680030727.01.T01 AT3G59200 32.474 194 111 7 50 230 7 193 4.25e-14 74.7
MsG0680030727.01.T01 AT5G38386 24.750 400 204 13 49 387 1 364 4.65e-14 73.9
MsG0680030727.01.T01 AT5G38386 24.750 400 204 13 49 387 1 364 4.65e-14 73.9
MsG0680030727.01.T01 AT3G59000 31.868 182 97 5 49 211 1 174 5.27e-14 74.3
MsG0680030727.01.T01 AT1G55660 26.376 436 235 17 46 401 49 478 6.78e-14 73.9
MsG0680030727.01.T01 AT5G56810 32.258 186 116 4 50 230 15 195 6.90e-14 72.4
MsG0680030727.01.T01 AT1G55660 33.333 198 116 6 46 233 49 240 7.51e-14 73.2
MsG0680030727.01.T01 AT3G59240 27.273 198 120 7 50 232 8 196 1.26e-13 73.2
MsG0680030727.01.T01 AT5G41630 31.304 230 123 9 50 255 12 230 1.58e-13 72.4
MsG0680030727.01.T01 AT3G59170 30.137 219 121 6 50 237 7 224 1.96e-13 72.4
MsG0680030727.01.T01 AT1G66310 29.703 202 129 4 36 232 5 198 2.21e-13 72.0
MsG0680030727.01.T01 AT5G56380 32.161 199 113 6 49 233 1 191 2.41e-13 72.0
MsG0680030727.01.T01 AT5G56380 32.161 199 113 6 49 233 1 191 2.41e-13 72.0
MsG0680030727.01.T01 AT4G14096 31.472 197 115 6 50 235 8 195 3.03e-13 71.6
MsG0680030727.01.T01 AT4G14096 31.472 197 115 6 50 235 8 195 3.03e-13 71.6
MsG0680030727.01.T01 AT3G58930 28.755 233 125 10 49 255 1 218 4.25e-13 71.2
MsG0680030727.01.T01 AT3G58930 28.755 233 125 10 49 255 1 218 4.25e-13 71.2
MsG0680030727.01.T01 AT3G58930 28.755 233 125 10 49 255 1 218 4.25e-13 71.2
MsG0680030727.01.T01 AT1G64540 31.351 185 108 5 52 232 7 176 7.19e-13 70.5
MsG0680030727.01.T01 AT1G64540 31.351 185 108 5 52 232 7 176 7.19e-13 70.5
MsG0680030727.01.T01 AT3G49480 25.121 414 231 11 50 393 12 416 9.98e-13 70.1
MsG0680030727.01.T01 AT5G56370 31.000 200 124 4 49 242 1 192 1.49e-12 68.6
MsG0680030727.01.T01 AT3G58900 30.045 223 126 9 49 252 1 212 1.62e-12 68.6
MsG0680030727.01.T01 AT3G58900 30.045 223 126 9 49 252 1 212 1.71e-12 68.6
MsG0680030727.01.T01 AT3G58900 30.045 223 126 9 49 252 1 212 1.71e-12 68.6
MsG0680030727.01.T01 AT1G66320 26.389 216 149 4 30 239 10 221 2.32e-12 68.9
MsG0680030727.01.T01 AT2G29930 25.431 464 235 18 50 419 12 458 2.33e-12 68.9
MsG0680030727.01.T01 AT2G29930 25.431 464 235 18 50 419 12 458 2.33e-12 68.9
MsG0680030727.01.T01 AT1G16930 32.275 189 114 5 50 232 15 195 3.78e-12 68.2
MsG0680030727.01.T01 AT1G16930 32.275 189 114 5 50 232 15 195 3.78e-12 68.2
MsG0680030727.01.T01 AT1G16930 32.275 189 114 5 50 232 15 195 3.78e-12 68.2
MsG0680030727.01.T01 AT3G58900 30.045 223 126 9 49 252 1 212 4.23e-12 68.2
MsG0680030727.01.T01 AT5G25850 28.497 193 122 5 48 235 18 199 4.27e-12 68.2
MsG0680030727.01.T01 AT3G59230 31.068 206 105 9 50 230 12 205 4.32e-12 68.2
MsG0680030727.01.T01 AT5G22730 27.200 250 154 7 11 255 4 230 5.34e-12 67.8
MsG0680030727.01.T01 AT5G22730 27.200 250 154 7 11 255 4 230 5.34e-12 67.8
MsG0680030727.01.T01 AT5G22730 27.200 250 154 7 11 255 4 230 5.77e-12 67.4
MsG0680030727.01.T01 AT4G13960 32.683 205 108 9 49 236 1 192 7.59e-12 67.4
MsG0680030727.01.T01 AT4G13960 32.683 205 108 9 49 236 1 192 7.59e-12 67.4
MsG0680030727.01.T01 AT5G35995 35.052 194 98 11 50 230 5 183 7.91e-12 67.4
MsG0680030727.01.T01 AT5G35995 35.052 194 98 11 50 230 5 183 7.91e-12 67.4
MsG0680030727.01.T01 AT3G58940 25.070 359 169 15 49 328 1 338 8.38e-12 67.4
MsG0680030727.01.T01 AT3G58940 25.070 359 169 15 49 328 1 338 8.38e-12 67.4
MsG0680030727.01.T01 AT2G42730 22.588 456 259 15 47 417 2 448 8.46e-12 67.0
MsG0680030727.01.T01 AT5G44950 29.680 219 124 7 50 252 4 208 9.03e-12 67.0
MsG0680030727.01.T01 AT1G22000 28.700 223 137 6 14 232 1 205 1.15e-11 66.6
MsG0680030727.01.T01 AT5G38390 30.986 213 128 7 49 255 1 200 1.69e-11 66.2
MsG0680030727.01.T01 AT1G78760 24.045 445 241 17 50 417 16 440 1.75e-11 66.2
MsG0680030727.01.T01 AT3G03040 31.696 224 125 9 49 255 1 213 3.24e-11 65.5
MsG0680030727.01.T01 AT3G56780 28.723 188 116 6 52 232 9 185 3.38e-11 65.1
MsG0680030727.01.T01 AT3G56780 28.723 188 116 6 52 232 9 185 4.51e-11 65.1
MsG0680030727.01.T01 AT5G02920 28.079 203 110 8 50 239 28 207 5.32e-11 63.2
MsG0680030727.01.T01 AT3G56780 28.723 188 116 6 52 232 9 185 5.42e-11 64.3
MsG0680030727.01.T01 AT3G59000 27.027 222 117 6 49 233 1 214 6.51e-11 63.9
MsG0680030727.01.T01 AT1G26890 30.357 168 101 5 51 213 39 195 9.21e-11 63.2
MsG0680030727.01.T01 AT1G26890 30.357 168 101 5 51 213 39 195 9.21e-11 63.2

Find 81 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATTTCACATATCATTAT+TGG 0.173547 6:-8095713 MsG0680030727.01.T01:CDS
ATCCTTCACCTTGCCTAAAT+TGG 0.180494 6:-8095874 MsG0680030727.01.T01:CDS
CTCCTCAGATGGAATGCTTT+TGG 0.192215 6:-8095358 MsG0680030727.01.T01:CDS
AGGTTCAAATGGTCAAAATT+TGG 0.195720 6:-8096968 MsG0680030727.01.T01:CDS
TTCTACGCATTTACACATTT+TGG 0.211060 6:-8095803 MsG0680030727.01.T01:CDS
AATAAACATATTCCAAAGTT+AGG 0.218058 6:+8096009 None:intergenic
TCAAATTCTTTATATTAAAA+AGG 0.218680 6:-8095652 MsG0680030727.01.T01:intron
ACTCAACATTTAAATCTTCT+AGG 0.231446 6:+8095940 None:intergenic
CGAGCCATCAAAGTTTAAAA+TGG 0.241204 6:+8095461 None:intergenic
AGTTTGTGTCAGAGGTCTTC+TGG 0.251113 6:-8096533 MsG0680030727.01.T01:CDS
GGTTCAAATGGTCAAAATTT+GGG 0.255431 6:-8096967 MsG0680030727.01.T01:CDS
ACACATTCAAGAACCGAAAT+TGG 0.260459 6:+8095507 None:intergenic
TAATAATGATGGAAACAATT+TGG 0.314231 6:-8096495 MsG0680030727.01.T01:CDS
GTCCATTTAATGTGGCAAAA+TGG 0.317935 6:-8096196 MsG0680030727.01.T01:CDS
TTTCCATTCCTTGGATGATC+TGG 0.326494 6:+8095533 None:intergenic
TTATTTCACATATCATTATT+GGG 0.336092 6:-8095712 MsG0680030727.01.T01:CDS
AATTGGACATTTCCATTCCT+TGG 0.350799 6:+8095524 None:intergenic
AAAGAAGGTGTCATGGTATC+TGG 0.351744 6:+8096322 None:intergenic
AAATATTGGGCTTCAAGGTT+TGG 0.363470 6:+8096120 None:intergenic
GATGAAAATATTGGGCTTCA+AGG 0.368442 6:+8096115 None:intergenic
GTTTGGAAGATGAAAATATT+GGG 0.370164 6:+8096107 None:intergenic
ATTCATATTGAACTAGTGTT+TGG 0.375436 6:-8095735 MsG0680030727.01.T01:CDS
GTTTGAGAACAACAAGGGTT+TGG 0.375886 6:+8096090 None:intergenic
GGTTTGGAAGATGAAAATAT+TGG 0.375968 6:+8096106 None:intergenic
ACACTGGCTCTAACCAATTT+AGG 0.384742 6:+8095861 None:intergenic
CGATAGAATCAGTGATTTAC+CGG 0.385308 6:-8096471 MsG0680030727.01.T01:CDS
ATATAAAGAATTTGAAGCTT+GGG 0.389867 6:+8095660 None:intergenic
GGAATGGAAATGTCCAATTT+CGG 0.391990 6:-8095520 MsG0680030727.01.T01:CDS
GAATTTGAAGCTTGGGAGAA+TGG 0.398601 6:+8095667 None:intergenic
ATAAACATATTCCAAAGTTA+GGG 0.401830 6:+8096010 None:intergenic
ATCACTCAAAACCCTAACTT+TGG 0.403329 6:-8096021 MsG0680030727.01.T01:CDS
TGAATTAAGTTTGAAAACAT+TGG 0.403791 6:+8095753 None:intergenic
AAACTTGAAAGGGTAATTGT+TGG 0.417701 6:-8096071 MsG0680030727.01.T01:CDS
AATATAAAGAATTTGAAGCT+TGG 0.418908 6:+8095659 None:intergenic
AACCAACCACTCAAAATGTT+TGG 0.419263 6:-8096251 MsG0680030727.01.T01:CDS
TGTTGTTCTCAAACTTGAAA+GGG 0.445699 6:-8096081 MsG0680030727.01.T01:CDS
AAGGATTTAAGCACTTCTTC+CGG 0.452778 6:+8095891 None:intergenic
TCATCTTCGAAGCGAAGAAC+AGG 0.462648 6:+8096350 None:intergenic
TTGAGTATATCAATACACTT+AGG 0.473743 6:-8095923 MsG0680030727.01.T01:CDS
TGACTTTAAGTATGATAACT+AGG 0.474240 6:-8095274 None:intergenic
CAGCAGACACTTAATAATGA+TGG 0.474266 6:-8096506 MsG0680030727.01.T01:CDS
TTCACATATCATTATTGGGA+TGG 0.479277 6:-8095708 MsG0680030727.01.T01:CDS
TTGTTGTTCTCAAACTTGAA+AGG 0.481022 6:-8096082 MsG0680030727.01.T01:CDS
ATGTGATGCAATAACTCATC+CGG 0.483777 6:+8096452 None:intergenic
CTTCTTTCGCTTCTGTCGCA+TGG 0.497308 6:-8096306 MsG0680030727.01.T01:CDS
TGTATGAATGCAGGTTCAAA+TGG 0.498355 6:-8096979 MsG0680030727.01.T01:intron
CCACAACAGTTCTCTCGAAA+CGG 0.499521 6:-8096397 MsG0680030727.01.T01:CDS
GTTGCTGTTGGCTCCTCAGA+TGG 0.507797 6:-8095369 MsG0680030727.01.T01:CDS
CTCTTACGAGACATGACAAT+CGG 0.518977 6:-8095393 MsG0680030727.01.T01:CDS
GTTCTCTCGAAACGGTGGAC+GGG 0.523233 6:-8096389 MsG0680030727.01.T01:CDS
AGACCAGATCATCCAAGGAA+TGG 0.526379 6:-8095536 MsG0680030727.01.T01:CDS
ATGATCTGAGTTTGTGTCAG+AGG 0.527050 6:-8096541 MsG0680030727.01.T01:CDS
ACATTTAAATCTTCTAGGAT+AGG 0.529783 6:+8095945 None:intergenic
TTCCAAAAGCATTCCATCTG+AGG 0.533223 6:+8095356 None:intergenic
TGGAATTATGTTCCTATCCA+AGG 0.534454 6:-8095323 MsG0680030727.01.T01:CDS
CCGACTCGGAACCAAATATG+AGG 0.536815 6:-8097077 MsG0680030727.01.T01:intron
TGAGTATATCAATACACTTA+GGG 0.539950 6:-8095922 MsG0680030727.01.T01:CDS
AAATGAAAATTGAGAGAAGA+GGG 0.540081 6:-8097101 MsG0680030727.01.T01:CDS
ATGACAATCGGCGTTGCTGT+TGG 0.550382 6:-8095381 MsG0680030727.01.T01:CDS
TTGTTGCACGAGGAGAGAGC+AGG 0.561431 6:+8096273 None:intergenic
AACCAATTTAGGCAAGGTGA+AGG 0.568364 6:+8095872 None:intergenic
GTTCAAATGGTCAAAATTTG+GGG 0.577107 6:-8096966 MsG0680030727.01.T01:intron
CATGCGACAGAAGCGAAAGA+AGG 0.586621 6:+8096307 None:intergenic
GGCTCTAACCAATTTAGGCA+AGG 0.595704 6:+8095866 None:intergenic
CCGTTTCGAGAGAACTGTTG+TGG 0.595911 6:+8096397 None:intergenic
TCAAAATGGTCCATTTAATG+TGG 0.597343 6:-8096204 MsG0680030727.01.T01:CDS
AGTTCTCTCGAAACGGTGGA+CGG 0.598483 6:-8096390 MsG0680030727.01.T01:CDS
CACAAAACAGCGTAGTGTAG+AGG 0.598588 6:-8096165 MsG0680030727.01.T01:CDS
TTCAAGTTTGAGAACAACAA+GGG 0.601830 6:+8096085 None:intergenic
TACACTTAGGGAGAATGTAC+CGG 0.602012 6:-8095910 MsG0680030727.01.T01:CDS
GAAGAAGACCAGATCATCCA+AGG 0.611447 6:-8095541 MsG0680030727.01.T01:CDS
AAAATGAAAATTGAGAGAAG+AGG 0.614058 6:-8097102 MsG0680030727.01.T01:CDS
TGAGAGAAGAGGGTCCGACT+CGG 0.616365 6:-8097091 MsG0680030727.01.T01:CDS
CCTCATATTTGGTTCCGAGT+CGG 0.619962 6:+8097077 None:intergenic
AGAAGCGAAAGAAGGTGTCA+TGG 0.626833 6:+8096315 None:intergenic
ATAAAAGAGAGCATCGACAC+TGG 0.626970 6:+8095845 None:intergenic
TTAAAATGGTACATGATCTG+AGG 0.630142 6:+8095475 None:intergenic
AGTGGTTGGTTTGTTGCACG+AGG 0.649480 6:+8096263 None:intergenic
TTTGAAGCTTGGGAGAATGG+CGG 0.651840 6:+8095670 None:intergenic
CAACAGTTCTCTCGAAACGG+TGG 0.652035 6:-8096394 MsG0680030727.01.T01:CDS
TTTCAAGTTTGAGAACAACA+AGG 0.683435 6:+8096084 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAACAATTATATATTA+TGG - Chr6:8095492-8095511 MsG0680030727.01.T01:CDS 10.0%
!! TCAAATTCTTTATATTAAAA+AGG - Chr6:8096722-8096741 MsG0680030727.01.T01:intron 10.0%
!! TTATTTCACATATCATTATT+GGG - Chr6:8096662-8096681 MsG0680030727.01.T01:intron 15.0%
!!! ATTTTAAAATACCTCATATT+TGG + Chr6:8095311-8095330 None:intergenic 15.0%
!!! TCAAATGATATTTTACATTT+TGG + Chr6:8097083-8097102 None:intergenic 15.0%
!! AATAAACATATTCCAAAGTT+AGG + Chr6:8096368-8096387 None:intergenic 20.0%
!! ATAAACATATTCCAAAGTTA+GGG + Chr6:8096367-8096386 None:intergenic 20.0%
!! GCAACAGAAAAATAATAAAT+AGG + Chr6:8095734-8095753 None:intergenic 20.0%
!! TGAATTAAGTTTGAAAACAT+TGG + Chr6:8096624-8096643 None:intergenic 20.0%
!!! AATATAAAGAATTTGAAGCT+TGG + Chr6:8096718-8096737 None:intergenic 20.0%
!!! ATATAAAGAATTTGAAGCTT+GGG + Chr6:8096717-8096736 None:intergenic 20.0%
!!! GTTATTTCACATATCATTAT+TGG - Chr6:8096661-8096680 MsG0680030727.01.T01:intron 20.0%
!!! TAATAATGATGGAAACAATT+TGG - Chr6:8095879-8095898 MsG0680030727.01.T01:CDS 20.0%
!!! TTAGCGTGATTTTTTTTTTA+GGG - Chr6:8095758-8095777 MsG0680030727.01.T01:CDS 20.0%
!!! TTTAGCGTGATTTTTTTTTT+AGG - Chr6:8095757-8095776 MsG0680030727.01.T01:CDS 20.0%
! ACTCAACATTTAAATCTTCT+AGG + Chr6:8096437-8096456 None:intergenic 25.0%
! ATAAAATTGTAGTGAACCTT+TGG - Chr6:8095522-8095541 MsG0680030727.01.T01:CDS 25.0%
! ATTCATATTGAACTAGTGTT+TGG - Chr6:8096639-8096658 MsG0680030727.01.T01:intron 25.0%
! CCACAATATAAATGAAATCT+AGG + Chr6:8095797-8095816 None:intergenic 25.0%
! CCTAGATTTCATTTATATTG+TGG - Chr6:8095794-8095813 MsG0680030727.01.T01:CDS 25.0%
! GTTTGGAAGATGAAAATATT+GGG + Chr6:8096270-8096289 None:intergenic 25.0%
! TAAAATTGTAGTGAACCTTT+GGG - Chr6:8095523-8095542 MsG0680030727.01.T01:CDS 25.0%
! TATATTAAAAGCCCTATCAA+AGG + Chr6:8095554-8095573 None:intergenic 25.0%
! TGAGTATATCAATACACTTA+GGG - Chr6:8096452-8096471 MsG0680030727.01.T01:CDS 25.0%
! TTCATTTATATTGTGGCTTT+AGG - Chr6:8095801-8095820 MsG0680030727.01.T01:CDS 25.0%
! TTGAGTATATCAATACACTT+AGG - Chr6:8096451-8096470 MsG0680030727.01.T01:CDS 25.0%
!! AGCATCTAGATTTGATAATT+GGG - Chr6:8095580-8095599 MsG0680030727.01.T01:intron 25.0%
!! ATTTTTAATCCTTTTGACAG+TGG - Chr6:8096811-8096830 MsG0680030727.01.T01:intron 25.0%
!! TAGCATCTAGATTTGATAAT+TGG - Chr6:8095579-8095598 MsG0680030727.01.T01:intron 25.0%
!! TGTACCATTTTAAACTTTGA+TGG - Chr6:8096909-8096928 MsG0680030727.01.T01:intron 25.0%
!!! ACATTTAAATCTTCTAGGAT+AGG + Chr6:8096432-8096451 None:intergenic 25.0%
!!! ATTAAATGGACCATTTTGAT+TGG + Chr6:8096169-8096188 None:intergenic 25.0%
AAACTTGAAAGGGTAATTGT+TGG - Chr6:8096303-8096322 MsG0680030727.01.T01:CDS 30.0%
AGGTTCAAATGGTCAAAATT+TGG - Chr6:8095406-8095425 MsG0680030727.01.T01:CDS 30.0%
GGTTCAAATGGTCAAAATTT+GGG - Chr6:8095407-8095426 MsG0680030727.01.T01:CDS 30.0%
GGTTTGGAAGATGAAAATAT+TGG + Chr6:8096271-8096290 None:intergenic 30.0%
GTTCAAATGGTCAAAATTTG+GGG - Chr6:8095408-8095427 MsG0680030727.01.T01:CDS 30.0%
TCAAAATGGTCCATTTAATG+TGG - Chr6:8096170-8096189 MsG0680030727.01.T01:CDS 30.0%
TGTTGTTCTCAAACTTGAAA+GGG - Chr6:8096293-8096312 MsG0680030727.01.T01:CDS 30.0%
TTAAAATGGTACATGATCTG+AGG + Chr6:8096902-8096921 None:intergenic 30.0%
TTCACATATCATTATTGGGA+TGG - Chr6:8096666-8096685 MsG0680030727.01.T01:intron 30.0%
! AGATTTGATAATTGGGAGAT+AGG - Chr6:8095587-8095606 MsG0680030727.01.T01:intron 30.0%
! TAACAAGAGTGTAATACAAG+CGG + Chr6:8095678-8095697 None:intergenic 30.0%
! TTCAAGTTTGAGAACAACAA+GGG + Chr6:8096292-8096311 None:intergenic 30.0%
! TTCTACGCATTTACACATTT+TGG - Chr6:8096571-8096590 MsG0680030727.01.T01:intron 30.0%
! TTGTTGTTCTCAAACTTGAA+AGG - Chr6:8096292-8096311 MsG0680030727.01.T01:CDS 30.0%
!! CATTTTAAACTTTGATGGCT+CGG - Chr6:8096914-8096933 MsG0680030727.01.T01:intron 30.0%
!! GCTTTTGGAAATAAATCAGA+TGG - Chr6:8097031-8097050 MsG0680030727.01.T01:intron 30.0%
!! TTACATTTTGGAGATATCCT+TGG + Chr6:8097071-8097090 None:intergenic 30.0%
!! TTTCAAGTTTGAGAACAACA+AGG + Chr6:8096293-8096312 None:intergenic 30.0%
!!! TGGTAAAAGAGAGTTTTGTT+GGG + Chr6:8095960-8095979 None:intergenic 30.0%
AAATATTGGGCTTCAAGGTT+TGG + Chr6:8096257-8096276 None:intergenic 35.0%
AACCAACCACTCAAAATGTT+TGG - Chr6:8096123-8096142 MsG0680030727.01.T01:CDS 35.0%
AAGGATTTAAGCACTTCTTC+CGG + Chr6:8096486-8096505 None:intergenic 35.0%
AATTGGACATTTCCATTCCT+TGG + Chr6:8096853-8096872 None:intergenic 35.0%
ACACATTCAAGAACCGAAAT+TGG + Chr6:8096870-8096889 None:intergenic 35.0%
ATCACTCAAAACCCTAACTT+TGG - Chr6:8096353-8096372 MsG0680030727.01.T01:CDS 35.0%
ATGTGATGCAATAACTCATC+CGG + Chr6:8095925-8095944 None:intergenic 35.0%
CAGCAGACACTTAATAATGA+TGG - Chr6:8095868-8095887 MsG0680030727.01.T01:CDS 35.0%
CGAGCCATCAAAGTTTAAAA+TGG + Chr6:8096916-8096935 None:intergenic 35.0%
CGATAGAATCAGTGATTTAC+CGG - Chr6:8095903-8095922 MsG0680030727.01.T01:CDS 35.0%
GATGAAAATATTGGGCTTCA+AGG + Chr6:8096262-8096281 None:intergenic 35.0%
GCTTGTATTACACTCTTGTT+AGG - Chr6:8095677-8095696 MsG0680030727.01.T01:CDS 35.0%
GGAATGGAAATGTCCAATTT+CGG - Chr6:8096854-8096873 MsG0680030727.01.T01:intron 35.0%
GTCCATTTAATGTGGCAAAA+TGG - Chr6:8096178-8096197 MsG0680030727.01.T01:CDS 35.0%
TAAAAGCCCTATCAAAGGTA+AGG + Chr6:8095549-8095568 None:intergenic 35.0%
TGGAATTATGTTCCTATCCA+AGG - Chr6:8097051-8097070 MsG0680030727.01.T01:intron 35.0%
TGTATGAATGCAGGTTCAAA+TGG - Chr6:8095395-8095414 MsG0680030727.01.T01:CDS 35.0%
TTCAGCTTCTTCTTCAATTG+AGG - Chr6:8095645-8095664 MsG0680030727.01.T01:intron 35.0%
!! AGCCATTTTGCCACATTAAA+TGG + Chr6:8096183-8096202 None:intergenic 35.0%
!! CGTTTTGACACCAATCAAAA+TGG - Chr6:8096156-8096175 MsG0680030727.01.T01:CDS 35.0%
!! GTGGTAAAAGAGAGTTTTGT+TGG + Chr6:8095961-8095980 None:intergenic 35.0%
!! TTTTGGAGATATCCTTGGAT+AGG + Chr6:8097066-8097085 None:intergenic 35.0%
!!! AAAGTTAGGGTTTTGAGTGA+TGG + Chr6:8096354-8096373 None:intergenic 35.0%
!!! AGCCTTTTTCGACGAAAATT+CGG + Chr6:8095343-8095362 None:intergenic 35.0%
AACCAATTTAGGCAAGGTGA+AGG + Chr6:8096505-8096524 None:intergenic 40.0%
ATCCTTCACCTTGCCTAAAT+TGG - Chr6:8096500-8096519 MsG0680030727.01.T01:CDS 40.0%
ATGATCTGAGTTTGTGTCAG+AGG - Chr6:8095833-8095852 MsG0680030727.01.T01:CDS 40.0%
CGAAAAAGGCTGAGATTAGT+CGG - Chr6:8095352-8095371 MsG0680030727.01.T01:CDS 40.0%
CTCTTACGAGACATGACAAT+CGG - Chr6:8096981-8097000 MsG0680030727.01.T01:intron 40.0%
GTTTGAGAACAACAAGGGTT+TGG + Chr6:8096287-8096306 None:intergenic 40.0%
TACACTTAGGGAGAATGTAC+CGG - Chr6:8096464-8096483 MsG0680030727.01.T01:CDS 40.0%
TTTCCATTCCTTGGATGATC+TGG + Chr6:8096844-8096863 None:intergenic 40.0%
TTTGGGCCTTACCTTTGATA+GGG - Chr6:8095540-8095559 MsG0680030727.01.T01:CDS 40.0%
! GAAAAAGGCTGAGATTAGTC+GGG - Chr6:8095353-8095372 MsG0680030727.01.T01:CDS 40.0%
! GAATTTGAAGCTTGGGAGAA+TGG + Chr6:8096710-8096729 None:intergenic 40.0%
! TGCCGAATTTTCGTCGAAAA+AGG - Chr6:8095338-8095357 MsG0680030727.01.T01:CDS 40.0%
! TTGACGCCAAACATTTTGAG+TGG + Chr6:8096132-8096151 None:intergenic 40.0%
! TTTTCGACGAAAATTCGGCA+GGG + Chr6:8095338-8095357 None:intergenic 40.0%
!! AAAGAAGGTGTCATGGTATC+TGG + Chr6:8096055-8096074 None:intergenic 40.0%
!! ACACTGGCTCTAACCAATTT+AGG + Chr6:8096516-8096535 None:intergenic 40.0%
!! ATAAAAGAGAGCATCGACAC+TGG + Chr6:8096532-8096551 None:intergenic 40.0%
!! TTCCAAAAGCATTCCATCTG+AGG + Chr6:8097021-8097040 None:intergenic 40.0%
!! TTTTTCGACGAAAATTCGGC+AGG + Chr6:8095339-8095358 None:intergenic 40.0%
!!! AGTGTCGATGCTCTCTTTTA+TGG - Chr6:8096531-8096550 MsG0680030727.01.T01:CDS 40.0%
AGACCAGATCATCCAAGGAA+TGG - Chr6:8096838-8096857 MsG0680030727.01.T01:intron 45.0%
AGTTTGTGTCAGAGGTCTTC+TGG - Chr6:8095841-8095860 MsG0680030727.01.T01:CDS 45.0%
CACAAAACAGCGTAGTGTAG+AGG - Chr6:8096209-8096228 MsG0680030727.01.T01:CDS 45.0%
CCACAACAGTTCTCTCGAAA+CGG - Chr6:8095977-8095996 MsG0680030727.01.T01:CDS 45.0%
CGGGTTTAAAAGACACGTGT+CGG - Chr6:8095372-8095391 MsG0680030727.01.T01:CDS 45.0%
CTATCAAAGGTAAGGCCCAA+AGG + Chr6:8095541-8095560 None:intergenic 45.0%
CTTTGGGCCTTACCTTTGAT+AGG - Chr6:8095539-8095558 MsG0680030727.01.T01:CDS 45.0%
GAAGAAGACCAGATCATCCA+AGG - Chr6:8096833-8096852 MsG0680030727.01.T01:intron 45.0%
GGTCTTCTTCCACTGTCAAA+AGG + Chr6:8096823-8096842 None:intergenic 45.0%
TCATCTTCGAAGCGAAGAAC+AGG + Chr6:8096027-8096046 None:intergenic 45.0%
! CCTCATATTTGGTTCCGAGT+CGG + Chr6:8095300-8095319 None:intergenic 45.0%
! CTCCTCAGATGGAATGCTTT+TGG - Chr6:8097016-8097035 MsG0680030727.01.T01:intron 45.0%
! GGCTCTAACCAATTTAGGCA+AGG + Chr6:8096511-8096530 None:intergenic 45.0%
! TTTGAAGCTTGGGAGAATGG+CGG + Chr6:8096707-8096726 None:intergenic 45.0%
!! AGAAGCGAAAGAAGGTGTCA+TGG + Chr6:8096062-8096081 None:intergenic 45.0%
!! CGCCAAACATTTTGAGTGGT+TGG + Chr6:8096128-8096147 None:intergenic 45.0%
!! CTCTACACTACGCTGTTTTG+TGG + Chr6:8096211-8096230 None:intergenic 45.0%
!!! AATATGTTTATTTTAAAAAT+TGG - Chr6:8096376-8096395 MsG0680030727.01.T01:CDS 5.0%
AGTTCTCTCGAAACGGTGGA+CGG - Chr6:8095984-8096003 MsG0680030727.01.T01:CDS 50.0%
ATGACAATCGGCGTTGCTGT+TGG - Chr6:8096993-8097012 MsG0680030727.01.T01:intron 50.0%
CAACAGTTCTCTCGAAACGG+TGG - Chr6:8095980-8095999 MsG0680030727.01.T01:CDS 50.0%
CATGCGACAGAAGCGAAAGA+AGG + Chr6:8096070-8096089 None:intergenic 50.0%
CCGTTTCGAGAGAACTGTTG+TGG + Chr6:8095980-8095999 None:intergenic 50.0%
CTTCTTTCGCTTCTGTCGCA+TGG - Chr6:8096068-8096087 MsG0680030727.01.T01:CDS 50.0%
! ACGTGTCGGTGTATGAATGC+AGG - Chr6:8095386-8095405 MsG0680030727.01.T01:CDS 50.0%
!! AGTGGTTGGTTTGTTGCACG+AGG + Chr6:8096114-8096133 None:intergenic 50.0%
!! CCGACTCGGAACCAAATATG+AGG - Chr6:8095297-8095316 MsG0680030727.01.T01:CDS 50.0%
GTTCTCTCGAAACGGTGGAC+GGG - Chr6:8095985-8096004 MsG0680030727.01.T01:CDS 55.0%
TAGGTGTGAGCGAGGATCGA+TGG - Chr6:8095606-8095625 MsG0680030727.01.T01:intron 55.0%
TCGACGAAAATTCGGCAGGG+AGG + Chr6:8095335-8095354 None:intergenic 55.0%
TGAGAGAAGAGGGTCCGACT+CGG - Chr6:8095283-8095302 MsG0680030727.01.T01:CDS 55.0%
TTGGGAGATAGGTGTGAGCG+AGG - Chr6:8095598-8095617 MsG0680030727.01.T01:intron 55.0%
TTGTTGCACGAGGAGAGAGC+AGG + Chr6:8096104-8096123 None:intergenic 55.0%
!! GTTGCTGTTGGCTCCTCAGA+TGG - Chr6:8097005-8097024 MsG0680030727.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr6 gene 8095275 8097121 8095275 ID=MsG0680030727.01;Name=MsG0680030727.01
Chr6 mRNA 8095275 8097121 8095275 ID=MsG0680030727.01.T01;Parent=MsG0680030727.01;Name=MsG0680030727.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|1|1|4|0|425
Chr6 exon 8097078 8097121 8097078 ID=MsG0680030727.01.T01:exon:7028;Parent=MsG0680030727.01.T01
Chr6 exon 8096967 8096988 8096967 ID=MsG0680030727.01.T01:exon:7027;Parent=MsG0680030727.01.T01
Chr6 exon 8095653 8096573 8095653 ID=MsG0680030727.01.T01:exon:7026;Parent=MsG0680030727.01.T01
Chr6 exon 8095275 8095565 8095275 ID=MsG0680030727.01.T01:exon:7025;Parent=MsG0680030727.01.T01
Chr6 CDS 8097078 8097121 8097078 ID=MsG0680030727.01.T01:cds;Parent=MsG0680030727.01.T01
Chr6 CDS 8096967 8096988 8096967 ID=MsG0680030727.01.T01:cds;Parent=MsG0680030727.01.T01
Chr6 CDS 8095653 8096573 8095653 ID=MsG0680030727.01.T01:cds;Parent=MsG0680030727.01.T01
Chr6 CDS 8095275 8095565 8095275 ID=MsG0680030727.01.T01:cds;Parent=MsG0680030727.01.T01
Gene Sequence

>MsG0680030727.01.T01

ATGAAAATTGAGAGAAGAGGGTCCGACTCGGAACCAAATATGAGGTTCAAATGGTCAAAATTTGGGGTACGCTTTGATGATCTGAGTTTGTGTCAGAGGTCTTCTGGTTCACAGCAGACACTTAATAATGATGGAAACAATTTGGTCGATAGAATCAGTGATTTACCGGATGAGTTATTGCATCACATTCTTTGTTTTCTCCCAACAAAACTCTCTTTTACCACAACAGTTCTCTCGAAACGGTGGACGGGACTATGCTATTCACTACCTGTTCTTCGCTTCGAAGATGAAACAACCAGATACCATGACACCTTCTTTCGCTTCTGTCGCATGGTTAATACTATCCTGCTCTCTCCTCGTGCAACAAACCAACCACTCAAAATGTTTGGCGTCAAGTGTCGTTTTGACACCAATCAAAATGGTCCATTTAATGTGGCAAAATGGCTAGAAACCACAAAACAGCGTAGTGTAGAGGAAGTTTATCTCTCTTTATGTTACCAAACCTTGAAGCCCAATATTTTCATCTTCCAAACCCTTGTTGTTCTCAAACTTGAAAGGGTAATTGTTGGAAAGAATACTTCATGTGTTGATCTTCCATCACTCAAAACCCTAACTTTGGAATATGTTTATTTTAAAAATTGGAATGATTATATAAATTTTCTCAATGCTTGTCCTATCCTAGAAGATTTAAATGTTGAGTATATCAATACACTTAGGGAGAATGTACCGGAAGAAGTGCTTAAATCCTTCACCTTGCCTAAATTGGTTAGAGCCAGTGTCGATGCTCTCTTTTATGGTATTGATAATGTCGAGTTTCTACGCATTTACACATTTTGGTTTAAAGAGACTTCTTTAAATGTCATTCCAATGTTTTCAAACTTAATTCATATTGAACTAGTGTTTGGTTATTTCACATATCATTATTGGGATGGTGTAGTAGAACTTCTCCGCCATTCTCCCAAGCTTCAAATTCTTTATATTAAAAAGTGGAAGAAGACCAGATCATCCAAGGAATGGAAATGTCCAATTTCGGTTCTTGAATGTGTTTTGTCACACCTCAGATCATGTACCATTTTAAACTTTGATGGCTCGGAAAATGATCTTCGATTTGCAAAATATATTTTGCAGAATGCGAGTCTCTTACGAGACATGACAATCGGCGTTGCTGTTGGCTCCTCAGATGGAATGCTTTTGGAAATAAATCAGATGGAATTATGTTCCTATCCAAGGATATCTCCAAAATGTAAAATATCATTTGACTTTAAGTATGATAACTAG
Protein sequence

>MsG0680030727.01.T01

MKIERRGSDSEPNMRFKWSKFGVRFDDLSLCQRSSGSQQTLNNDGNNLVDRISDLPDELLHHILCFLPTKLSFTTTVLSKRWTGLCYSLPVLRFEDETTRYHDTFFRFCRMVNTILLSPRATNQPLKMFGVKCRFDTNQNGPFNVAKWLETTKQRSVEEVYLSLCYQTLKPNIFIFQTLVVLKLERVIVGKNTSCVDLPSLKTLTLEYVYFKNWNDYINFLNACPILEDLNVEYINTLRENVPEEVLKSFTLPKLVRASVDALFYGIDNVEFLRIYTFWFKETSLNVIPMFSNLIHIELVFGYFTYHYWDGVVELLRHSPKLQILYIKKWKKTRSSKEWKCPISVLECVLSHLRSCTILNFDGSENDLRFAKYILQNASLLRDMTIGVAVGSSDGMLLEINQMELCSYPRISPKCKISFDFKYDN*