AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044831.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044831.01.T01 MTR_1g085120 61.168 394 129 7 12 395 92 471 2.71e-150 434
MsG0880044831.01.T01 MTR_1g085120 61.168 394 129 7 12 395 167 546 1.49e-149 434
MsG0880044831.01.T01 MTR_4g039440 56.110 401 153 7 4 395 26 412 4.49e-135 393
MsG0880044831.01.T01 MTR_6g011460 56.599 394 147 6 10 395 44 421 6.98e-133 388
MsG0880044831.01.T01 MTR_6g022500 54.987 391 158 6 10 395 99 476 8.87e-130 382
MsG0880044831.01.T01 MTR_7g055943 53.266 398 158 9 11 395 39 421 1.02e-122 362
MsG0880044831.01.T01 MTR_1g066830 52.041 392 168 6 11 394 7 386 3.83e-118 348
MsG0880044831.01.T01 MTR_1089s0010 51.688 385 174 4 11 395 7 379 6.31e-118 348
MsG0880044831.01.T01 MTR_6g040270 50.785 382 178 3 14 395 10 381 1.42e-114 339
MsG0880044831.01.T01 MTR_6g022360 50.000 392 164 7 10 394 41 407 1.59e-113 338
MsG0880044831.01.T01 MTR_6g044572 49.161 417 151 8 11 395 1 388 1.99e-112 334
MsG0880044831.01.T01 MTR_6g044560 48.826 426 157 8 2 395 168 564 7.56e-111 336
MsG0880044831.01.T01 MTR_5g058000 51.823 384 169 7 11 394 7 374 3.44e-107 320
MsG0880044831.01.T01 MTR_5g058100 50.380 395 174 9 7 394 4 383 1.27e-106 319
MsG0880044831.01.T01 MTR_1g085120 59.468 301 101 6 12 302 179 468 8.12e-104 315
MsG0880044831.01.T01 MTR_5g073420 46.154 390 190 7 9 395 8 380 9.74e-104 312
MsG0880044831.01.T01 MTR_6g022520 56.740 319 123 5 86 395 1 313 4.61e-97 292
MsG0880044831.01.T01 MTR_7g026500 42.365 406 186 12 12 394 14 394 8.75e-84 261
MsG0880044831.01.T01 MTR_3g095600 40.625 384 134 11 9 388 1 294 8.01e-72 227
MsG0880044831.01.T01 MTR_5g045170 40.640 406 205 13 4 394 6 390 2.60e-71 229
MsG0880044831.01.T01 MTR_1g108820 42.184 403 188 16 11 393 7 384 1.24e-70 227
MsG0880044831.01.T01 MTR_5g007410 38.021 384 217 5 14 387 28 400 6.50e-69 224
MsG0880044831.01.T01 MTR_6g045333 38.442 398 219 9 11 394 60 445 5.19e-66 216
MsG0880044831.01.T01 MTR_0009s0080 37.245 392 219 9 14 393 20 396 2.07e-65 214
MsG0880044831.01.T01 MTR_5g045510 36.228 403 214 11 1 393 1 370 1.60e-63 208
MsG0880044831.01.T01 MTR_3g071850 37.722 395 220 9 11 391 23 405 7.85e-63 216
MsG0880044831.01.T01 MTR_5g061680 41.049 324 149 9 9 327 8 294 4.01e-62 203
MsG0880044831.01.T01 MTR_5g039490 37.592 407 199 12 1 394 11 375 7.66e-61 201
MsG0880044831.01.T01 MTR_6g022390 73.881 134 34 1 9 142 2 134 9.50e-61 193
MsG0880044831.01.T01 MTR_1g108800 40.665 391 167 11 11 393 7 340 1.39e-59 197
MsG0880044831.01.T01 MTR_2g036470 37.343 399 217 13 12 394 14 395 1.39e-56 191
MsG0880044831.01.T01 MTR_5g073370 37.626 396 211 13 12 393 5 378 6.17e-56 189
MsG0880044831.01.T01 MTR_5g031970 35.606 396 198 7 4 392 8 353 7.98e-56 187
MsG0880044831.01.T01 MTR_1g041245 34.913 401 221 15 11 395 10 386 6.25e-51 176
MsG0880044831.01.T01 MTR_5g039450 35.369 393 201 11 11 392 5 355 1.30e-50 174
MsG0880044831.01.T01 MTR_3g108560 36.387 393 216 16 12 394 20 388 6.56e-50 173
MsG0880044831.01.T01 MTR_5g039470 35.503 338 197 7 28 355 1 327 1.30e-47 165
MsG0880044831.01.T01 MTR_3g107100 35.381 407 221 16 12 395 11 398 2.42e-45 161
MsG0880044831.01.T01 MTR_3g107160 33.666 401 222 14 12 395 10 383 2.67e-45 160
MsG0880044831.01.T01 MTR_3g099830 32.187 407 215 13 7 393 7 372 3.82e-45 160
MsG0880044831.01.T01 MTR_5g076150 47.032 219 92 5 128 324 11 227 1.19e-44 154
MsG0880044831.01.T01 MTR_3g107120 35.627 407 217 18 8 392 5 388 1.02e-43 157
MsG0880044831.01.T01 MTR_2g007450 31.390 446 211 12 6 393 10 418 8.54e-43 155
MsG0880044831.01.T01 MTR_7g033990 31.738 397 232 11 7 389 6 377 1.33e-42 154
MsG0880044831.01.T01 MTR_1377s0010 56.204 137 59 1 232 368 1 136 2.32e-42 145
MsG0880044831.01.T01 MTR_0543s0010 34.439 392 220 15 12 394 86 449 3.27e-42 154
MsG0880044831.01.T01 MTR_5g033200 51.190 168 80 2 222 389 11 176 5.58e-42 146
MsG0880044831.01.T01 MTR_1g108820 38.019 313 152 13 11 302 7 298 5.66e-42 151
MsG0880044831.01.T01 MTR_7g056433 32.323 396 238 13 12 395 12 389 5.72e-42 152
MsG0880044831.01.T01 MTR_7g033915 31.078 399 216 13 11 394 10 364 6.85e-42 151
MsG0880044831.01.T01 MTR_5g054920 44.221 199 89 7 191 379 7 193 8.58e-42 145
MsG0880044831.01.T01 MTR_5g063950 31.443 388 213 11 17 392 13 359 9.05e-42 150
MsG0880044831.01.T01 MTR_7g075820 31.477 413 226 14 12 393 6 392 1.24e-41 151
MsG0880044831.01.T01 MTR_3g023630 35.250 400 206 16 11 392 7 371 2.44e-41 150
MsG0880044831.01.T01 MTR_2g007400 30.310 419 236 13 7 393 7 401 4.16e-41 150
MsG0880044831.01.T01 MTR_5g065100 33.247 388 197 13 17 394 13 348 4.91e-41 150
MsG0880044831.01.T01 MTR_3g095630 46.629 178 91 2 209 386 3 176 6.51e-41 143
MsG0880044831.01.T01 MTR_3g105060 32.143 392 228 11 11 395 13 373 1.98e-40 147
MsG0880044831.01.T01 MTR_5g008920 34.653 404 226 15 4 395 4 381 2.50e-40 147
MsG0880044831.01.T01 MTR_7g098510 33.333 399 228 15 11 395 17 391 5.40e-40 146
MsG0880044831.01.T01 MTR_7g056287 32.746 397 231 12 10 395 1 372 8.43e-40 145
MsG0880044831.01.T01 MTR_7g098480 34.750 400 217 15 11 394 17 388 1.14e-39 147
MsG0880044831.01.T01 MTR_5g073340 35.030 334 161 11 11 328 7 300 1.85e-39 143
MsG0880044831.01.T01 MTR_7g007080 31.852 405 228 13 9 393 1 377 2.90e-39 144
MsG0880044831.01.T01 MTR_7g032380 31.566 396 211 14 11 395 10 356 3.47e-39 144
MsG0880044831.01.T01 MTR_2g005990 32.870 432 204 18 8 393 2 393 4.82e-39 144
MsG0880044831.01.T01 MTR_1g053025 30.318 409 235 13 11 392 1 386 7.56e-39 143
MsG0880044831.01.T01 MTR_3g095640 51.807 166 66 6 11 169 17 175 9.60e-39 137
MsG0880044831.01.T01 MTR_7g056277 34.165 401 220 16 10 395 257 628 9.82e-39 147
MsG0880044831.01.T01 MTR_7g088260 31.980 394 236 11 12 395 91 462 1.67e-38 144
MsG0880044831.01.T01 MTR_3g087260 31.567 453 232 17 12 394 12 456 1.70e-38 144
MsG0880044831.01.T01 MTR_3g108150 31.552 393 240 11 12 394 13 386 1.36e-37 140
MsG0880044831.01.T01 MTR_0492s0020 34.358 358 201 13 12 360 86 418 1.41e-37 141
MsG0880044831.01.T01 MTR_7g098570 32.412 398 231 14 7 390 15 388 2.14e-37 141
MsG0880044831.01.T01 MTR_7g115270 30.244 410 235 12 12 392 12 399 7.48e-37 138
MsG0880044831.01.T01 MTR_6g033095 41.014 217 72 2 151 367 32 192 9.89e-37 132
MsG0880044831.01.T01 MTR_5g058350 45.876 194 71 3 8 201 4 163 1.21e-36 132
MsG0880044831.01.T01 MTR_3g036250 32.178 404 208 17 11 392 4 363 9.14e-36 134
MsG0880044831.01.T01 MTR_3g108560 36.455 299 161 12 12 302 20 297 1.86e-35 132
MsG0880044831.01.T01 MTR_7g114710 30.637 408 219 14 4 395 5 364 3.28e-35 133
MsG0880044831.01.T01 MTR_5g008950 30.769 403 220 15 14 395 1 365 5.17e-35 133
MsG0880044831.01.T01 MTR_2g008320 30.825 412 233 15 6 395 46 427 1.39e-34 133
MsG0880044831.01.T01 MTR_5g083890 30.476 420 230 15 12 392 6 402 8.29e-34 132
MsG0880044831.01.T01 MTR_3g082890 29.717 424 238 14 4 395 89 484 2.59e-33 130
MsG0880044831.01.T01 MTR_3g109982 30.388 464 227 14 12 387 13 468 2.68e-33 132
MsG0880044831.01.T01 MTR_1g107385 30.238 420 225 16 12 393 32 421 3.07e-33 129
MsG0880044831.01.T01 MTR_2g007360 31.401 414 209 19 7 393 7 372 5.15e-33 127
MsG0880044831.01.T01 MTR_2g008310 31.111 405 225 16 11 395 1 371 6.64e-32 125
MsG0880044831.01.T01 MTR_7g034120 35.110 319 170 14 95 395 9 308 6.79e-32 123
MsG0880044831.01.T01 MTR_7g083740 27.778 396 229 10 11 394 16 366 1.48e-30 120
MsG0880044831.01.T01 MTR_3g467400 28.710 411 224 13 10 395 1 367 2.22e-30 120
MsG0880044831.01.T01 MTR_7g021990 30.769 390 234 12 11 385 47 415 6.75e-30 120
MsG0880044831.01.T01 MTR_7g021950 30.769 390 234 12 11 385 47 415 1.76e-29 119
MsG0880044831.01.T01 MTR_7g007340 29.950 404 206 15 3 387 4 349 2.44e-29 117
MsG0880044831.01.T01 MTR_3g040700 30.245 367 198 15 7 352 38 367 3.18e-29 118
MsG0880044831.01.T01 MTR_7g034115 30.280 393 239 15 7 387 6 375 1.55e-28 115
MsG0880044831.01.T01 MTR_7g032370 30.829 386 218 19 24 395 2 352 1.68e-28 114
MsG0880044831.01.T01 MTR_7g056430 29.620 395 213 16 12 387 9 357 3.64e-28 117
MsG0880044831.01.T01 MTR_6g022410 63.529 85 28 1 311 395 26 107 5.05e-28 107
MsG0880044831.01.T01 MTR_7g056420 29.620 395 213 16 12 387 9 357 5.64e-28 116
MsG0880044831.01.T01 MTR_4g098590 29.380 371 220 12 14 359 1 354 9.12e-28 113
MsG0880044831.01.T01 MTR_1g059860 31.449 283 140 7 115 352 38 311 9.56e-28 112
MsG0880044831.01.T01 MTR_3g082890 27.549 461 237 15 4 395 9 441 3.66e-27 112
MsG0880044831.01.T01 MTR_2g007500 29.261 352 205 11 7 339 9 335 4.04e-27 110
MsG0880044831.01.T01 MTR_7g060470 30.175 401 231 14 10 382 1 380 4.40e-27 111
MsG0880044831.01.T01 MTR_5g061410 31.081 296 156 9 17 302 10 267 7.20e-27 108
MsG0880044831.01.T01 MTR_7g056020 29.771 393 217 13 12 387 16 366 5.67e-26 110
MsG0880044831.01.T01 MTR_7g022105 30.334 389 227 14 11 380 48 411 5.79e-25 105
MsG0880044831.01.T01 MTR_7g034110 27.835 388 202 13 11 385 10 332 2.30e-24 103
MsG0880044831.01.T01 MTR_4g080610 26.531 392 228 13 14 394 14 356 9.12e-24 101
MsG0880044831.01.T01 MTR_7g007370 30.745 322 146 12 11 318 16 274 1.11e-23 101
MsG0880044831.01.T01 MTR_4g032730 27.312 465 245 18 11 394 14 466 1.57e-23 102
MsG0880044831.01.T01 MTR_5g012840 27.826 345 172 12 33 363 10 291 3.00e-23 99.4
MsG0880044831.01.T01 MTR_8g467800 27.373 453 241 17 12 395 20 453 3.06e-23 101
MsG0880044831.01.T01 MTR_8g070950 29.663 445 227 26 12 395 15 434 6.55e-23 100
MsG0880044831.01.T01 MTR_8g085430 37.019 208 106 9 11 206 10 204 1.07e-21 95.5
MsG0880044831.01.T01 MTR_8g062010 26.398 447 241 16 12 395 9 430 1.37e-21 96.3
MsG0880044831.01.T01 MTR_8g077460 26.119 402 243 12 12 395 10 375 7.15e-21 93.6
MsG0880044831.01.T01 MTR_5g013500 27.809 356 212 13 63 395 32 365 9.46e-21 93.2
MsG0880044831.01.T01 MTR_5g024060 43.750 128 65 2 261 387 79 200 9.50e-21 91.3
MsG0880044831.01.T01 MTR_8g058970 25.000 468 260 15 11 395 18 477 1.52e-20 93.6
MsG0880044831.01.T01 MTR_3g071790 32.796 186 112 4 179 353 19 202 2.12e-20 89.0
MsG0880044831.01.T01 MTR_3g110010 29.973 377 172 12 12 302 13 383 2.31e-20 93.6
MsG0880044831.01.T01 MTR_7g056447 37.788 217 103 11 12 217 9 204 3.08e-20 90.5
MsG0880044831.01.T01 MTR_8g469020 26.898 461 244 21 12 395 7 451 5.30e-20 91.7
MsG0880044831.01.T01 MTR_0571s0010 52.273 88 33 1 12 99 32 110 5.74e-20 85.1
MsG0880044831.01.T01 MTR_8g062310 25.926 432 256 20 6 395 19 428 1.10e-19 90.9
MsG0880044831.01.T01 MTR_8g014160 29.167 408 242 17 12 395 41 425 1.17e-19 90.5
MsG0880044831.01.T01 MTR_4g056020 24.424 434 239 12 12 374 9 424 8.46e-19 88.2
MsG0880044831.01.T01 MTR_2g083840 25.696 467 246 20 6 395 15 457 1.47e-18 87.4
MsG0880044831.01.T01 MTR_5g092960 27.826 460 240 15 11 394 18 461 2.06e-18 87.0
MsG0880044831.01.T01 MTR_3g026920 26.714 423 241 18 6 392 13 402 2.49e-18 86.7
MsG0880044831.01.T01 MTR_8g467800 32.479 234 129 7 12 232 20 237 3.36e-18 85.5
MsG0880044831.01.T01 MTR_1g038710 26.490 453 234 14 7 377 14 449 3.37e-18 86.3
MsG0880044831.01.T01 MTR_4g056030 26.056 426 222 14 12 363 9 415 5.52e-18 85.9
MsG0880044831.01.T01 MTR_2g007090 30.901 233 131 7 166 394 87 293 1.62e-17 82.8
MsG0880044831.01.T01 MTR_4g055990 25.806 465 236 18 12 374 9 466 1.62e-17 84.7
MsG0880044831.01.T01 MTR_4g055990 25.806 465 236 18 12 374 9 466 1.69e-17 84.3
MsG0880044831.01.T01 MTR_8g014260 24.889 450 258 14 12 395 16 451 2.73e-17 83.6
MsG0880044831.01.T01 MTR_4g134150 35.025 197 102 10 12 203 14 189 1.51e-16 78.6
MsG0880044831.01.T01 MTR_8g468760 28.337 427 247 23 11 394 8 418 2.68e-16 80.5
MsG0880044831.01.T01 MTR_2g007550 27.387 398 203 16 7 392 9 332 3.00e-16 79.7
MsG0880044831.01.T01 MTR_8g062080 24.183 459 249 18 6 395 17 445 7.21e-16 79.3
MsG0880044831.01.T01 MTR_8g468840 27.716 451 239 24 12 392 14 447 1.05e-15 79.0
MsG0880044831.01.T01 MTR_5g084070 27.610 431 235 16 11 387 12 419 1.43e-15 78.6
MsG0880044831.01.T01 MTR_6g029350 31.818 220 111 11 191 395 3 198 3.09e-15 75.1
MsG0880044831.01.T01 MTR_8g062270 25.383 457 250 18 11 394 15 453 5.07e-15 76.6
MsG0880044831.01.T01 MTR_8g445780 26.448 397 208 16 12 344 13 389 1.08e-14 75.5
MsG0880044831.01.T01 MTR_3g115430 32.576 132 76 5 270 395 1 125 1.54e-14 70.1
MsG0880044831.01.T01 MTR_2g020180 37.719 114 58 3 282 395 115 215 1.59e-14 72.4
MsG0880044831.01.T01 MTR_5g080710 27.752 436 235 14 11 387 32 446 1.78e-14 75.1
MsG0880044831.01.T01 MTR_7g034090 31.959 194 110 6 211 395 132 312 2.60e-14 74.3
MsG0880044831.01.T01 MTR_7g033945 34.659 176 91 7 11 176 10 171 4.02e-14 70.5
MsG0880044831.01.T01 MTR_7g056280 28.241 216 128 6 191 392 368 570 4.80e-14 74.3
MsG0880044831.01.T01 MTR_7g056280 29.218 243 127 13 14 227 8 234 5.32e-11 64.7
MsG0880044831.01.T01 MTR_3g114200 36.641 131 66 4 12 140 19 134 7.30e-14 69.3
MsG0880044831.01.T01 MTR_6g061720 54.930 71 25 2 17 87 13 76 3.90e-13 64.7
MsG0880044831.01.T01 MTR_8g467790 31.841 201 116 8 11 200 147 337 1.03e-12 69.7
MsG0880044831.01.T01 MTR_4g050250 30.078 256 153 11 11 244 20 271 1.10e-12 69.3
MsG0880044831.01.T01 MTR_7g081290 33.117 154 88 6 249 395 111 256 1.12e-12 67.8
MsG0880044831.01.T01 MTR_8g468810 24.236 458 254 17 12 395 25 463 1.26e-12 69.3
MsG0880044831.01.T01 MTR_7g098590 70.213 47 14 0 11 57 17 63 1.41e-12 65.1
MsG0880044831.01.T01 MTR_1g090900 32.597 181 101 5 12 186 11 176 3.78e-12 65.5
MsG0880044831.01.T01 MTR_1g090883 29.756 205 119 6 12 206 19 208 1.25e-11 65.9
MsG0880044831.01.T01 MTR_3g106960 29.557 203 117 7 197 387 2 190 1.65e-11 64.3
MsG0880044831.01.T01 MTR_5g045700 59.091 44 18 0 14 57 15 58 1.95e-11 59.3
MsG0880044831.01.T01 MTR_5g092960 33.203 256 143 10 11 248 18 263 4.52e-11 64.3
MsG0880044831.01.T01 MTR_7g033940 36.364 132 69 5 10 139 92 210 4.61e-11 62.8
MsG0880044831.01.T01 MTR_2g100590 30.516 213 112 10 11 204 41 236 4.80e-11 64.3
MsG0880044831.01.T01 MTR_2g100590 30.516 213 112 10 11 204 41 236 4.85e-11 64.3
MsG0880044831.01.T01 MTR_2g100590 30.097 206 122 9 11 204 41 236 6.14e-11 64.3
MsG0880044831.01.T01 MTR_7g033470 39.326 89 47 1 1 89 3 84 9.38e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044831.01.T01 AT4G26340 28.635 447 229 17 11 395 1 419 1.79e-28 115
MsG0880044831.01.T01 AT5G56420 27.891 441 237 16 12 395 6 422 6.69e-26 108
MsG0880044831.01.T01 AT5G56420 27.891 441 237 16 12 395 6 422 6.69e-26 108
MsG0880044831.01.T01 AT5G56420 27.891 441 237 16 12 395 6 422 6.69e-26 108
MsG0880044831.01.T01 AT4G26350 26.562 448 246 12 11 395 1 428 4.04e-25 106
MsG0880044831.01.T01 AT5G56440 27.511 458 229 17 11 394 1 429 1.61e-24 104
MsG0880044831.01.T01 AT4G00160 28.188 447 244 18 9 395 13 442 5.10e-24 103
MsG0880044831.01.T01 AT3G50710 27.314 443 242 14 11 392 1 424 2.39e-22 98.6
MsG0880044831.01.T01 AT5G56370 27.865 445 235 15 11 394 1 420 8.89e-22 96.7
MsG0880044831.01.T01 AT5G56370 27.865 445 235 15 11 394 1 420 8.89e-22 96.7
MsG0880044831.01.T01 AT3G59190 37.436 195 111 5 12 200 12 201 2.70e-21 95.1
MsG0880044831.01.T01 AT3G49030 28.474 439 255 19 4 394 13 440 5.10e-21 94.7
MsG0880044831.01.T01 AT3G59190 37.436 195 111 5 12 200 12 201 6.66e-21 94.7
MsG0880044831.01.T01 AT5G56380 27.511 458 238 19 11 394 1 438 1.55e-20 93.2
MsG0880044831.01.T01 AT5G56380 27.511 458 238 19 11 394 1 438 1.55e-20 93.2
MsG0880044831.01.T01 AT5G41840 35.922 206 106 7 12 200 14 210 1.16e-19 91.3
MsG0880044831.01.T01 AT5G38590 28.117 409 208 12 11 359 1 383 1.91e-19 89.7
MsG0880044831.01.T01 AT3G58880 35.455 220 131 6 10 224 1 214 5.11e-19 89.0
MsG0880044831.01.T01 AT4G00320 33.824 204 112 6 12 200 13 208 5.11e-19 89.4
MsG0880044831.01.T01 AT3G51530 27.293 458 240 20 3 395 24 453 6.66e-19 88.6
MsG0880044831.01.T01 AT3G52680 25.546 458 240 16 9 395 18 445 2.27e-18 87.0
MsG0880044831.01.T01 AT5G41630 36.321 212 94 10 12 200 12 205 2.66e-18 86.7
MsG0880044831.01.T01 AT2G04230 26.201 458 252 15 6 395 7 446 4.17e-18 86.3
MsG0880044831.01.T01 AT4G10400 26.207 435 243 14 11 394 1 408 5.53e-18 85.5
MsG0880044831.01.T01 AT4G10400 26.207 435 243 14 11 394 1 408 5.53e-18 85.5
MsG0880044831.01.T01 AT4G10400 26.207 435 243 14 11 394 1 408 5.53e-18 85.5
MsG0880044831.01.T01 AT5G38570 27.628 409 237 13 11 394 1 375 1.33e-17 84.0
MsG0880044831.01.T01 AT1G78750 24.678 466 240 19 11 392 17 455 1.34e-17 84.7
MsG0880044831.01.T01 AT1G78750 24.678 466 240 19 11 392 17 455 1.34e-17 84.7
MsG0880044831.01.T01 AT5G41830 34.314 204 111 6 12 200 13 208 1.42e-17 84.7
MsG0880044831.01.T01 AT3G59160 35.185 216 106 7 12 200 13 221 5.99e-17 82.8
MsG0880044831.01.T01 AT1G55030 25.734 443 228 17 10 383 17 427 1.78e-16 81.3
MsG0880044831.01.T01 AT3G42770 27.231 437 229 18 17 387 4 417 1.88e-16 81.6
MsG0880044831.01.T01 AT1G55030 25.734 443 228 17 10 383 7 417 1.90e-16 80.9
MsG0880044831.01.T01 AT3G59200 33.846 195 115 7 12 200 7 193 2.28e-16 80.5
MsG0880044831.01.T01 AT3G59000 35.754 179 102 4 11 181 1 174 3.95e-16 80.5
MsG0880044831.01.T01 AT5G22670 31.250 272 162 9 12 274 11 266 4.22e-16 80.1
MsG0880044831.01.T01 AT3G59170 36.073 219 102 9 12 200 7 217 4.84e-16 80.1
MsG0880044831.01.T01 AT5G38386 25.373 402 210 15 11 360 1 364 6.21e-16 79.3
MsG0880044831.01.T01 AT5G38386 25.373 402 210 15 11 360 1 364 6.21e-16 79.3
MsG0880044831.01.T01 AT3G59200 34.021 194 116 7 12 200 7 193 6.23e-16 79.7
MsG0880044831.01.T01 AT1G16930 25.054 467 229 20 12 392 15 446 6.68e-16 79.3
MsG0880044831.01.T01 AT1G16930 25.054 467 229 20 12 392 15 446 6.68e-16 79.3
MsG0880044831.01.T01 AT1G16930 25.054 467 229 20 12 392 15 446 6.68e-16 79.3
MsG0880044831.01.T01 AT5G60610 27.952 415 206 18 11 360 1 387 9.04e-16 78.6
MsG0880044831.01.T01 AT5G60610 27.952 415 206 18 11 360 1 387 9.04e-16 78.6
MsG0880044831.01.T01 AT5G62970 24.726 457 262 15 11 394 1 448 1.22e-15 78.6
MsG0880044831.01.T01 AT5G53635 34.536 194 104 6 14 200 2 179 1.32e-15 78.6
MsG0880044831.01.T01 AT4G14096 37.500 200 107 10 12 205 8 195 4.03e-15 77.0
MsG0880044831.01.T01 AT4G14096 37.500 200 107 10 12 205 8 195 4.03e-15 77.0
MsG0880044831.01.T01 AT4G14103 35.678 199 114 8 12 205 8 197 4.15e-15 76.6
MsG0880044831.01.T01 AT4G14103 35.678 199 114 8 12 205 8 197 4.15e-15 76.6
MsG0880044831.01.T01 AT1G55660 32.178 202 119 4 10 204 51 241 4.24e-15 76.6
MsG0880044831.01.T01 AT4G09920 31.220 205 117 5 11 207 1 189 5.17e-15 75.5
MsG0880044831.01.T01 AT4G09920 31.220 205 117 5 11 207 1 189 5.17e-15 75.5
MsG0880044831.01.T01 AT4G09920 31.220 205 117 5 11 207 1 189 5.17e-15 75.5
MsG0880044831.01.T01 AT4G14103 35.678 199 114 8 12 205 8 197 5.41e-15 76.6
MsG0880044831.01.T01 AT5G56690 31.156 199 118 4 14 204 4 191 6.23e-15 76.3
MsG0880044831.01.T01 AT4G09920 24.444 360 196 9 11 339 1 315 6.32e-15 75.5
MsG0880044831.01.T01 AT4G09920 24.444 360 196 9 11 339 1 315 6.32e-15 75.5
MsG0880044831.01.T01 AT1G58310 36.744 215 107 11 12 205 8 214 6.75e-15 76.6
MsG0880044831.01.T01 AT5G22700 33.990 203 104 7 12 205 43 224 7.37e-15 76.3
MsG0880044831.01.T01 AT5G44940 26.330 376 219 13 12 362 5 347 7.58e-15 75.9
MsG0880044831.01.T01 AT5G22700 33.990 203 104 7 12 205 6 187 9.47e-15 75.9
MsG0880044831.01.T01 AT5G22700 33.990 203 104 7 12 205 6 187 9.47e-15 75.9
MsG0880044831.01.T01 AT5G22700 33.990 203 104 7 12 205 6 187 9.47e-15 75.9
MsG0880044831.01.T01 AT5G22700 33.990 203 104 7 12 205 6 187 9.47e-15 75.9
MsG0880044831.01.T01 AT1G48400 31.364 220 138 7 12 224 10 223 9.91e-15 76.3
MsG0880044831.01.T01 AT5G22700 33.990 203 104 7 12 205 43 224 1.02e-14 75.9
MsG0880044831.01.T01 AT1G55660 32.178 202 119 4 10 204 51 241 1.04e-14 75.9
MsG0880044831.01.T01 AT1G48400 31.674 221 136 8 12 224 10 223 1.22e-14 75.9
MsG0880044831.01.T01 AT5G56370 27.976 336 179 11 11 302 1 317 1.55e-14 74.3
MsG0880044831.01.T01 AT5G38590 33.333 204 109 5 11 207 1 184 1.69e-14 73.9
MsG0880044831.01.T01 AT5G38392 33.032 221 124 7 11 217 1 211 1.99e-14 72.4
MsG0880044831.01.T01 AT5G38565 27.204 397 219 14 11 394 1 340 3.26e-14 73.6
MsG0880044831.01.T01 AT4G00315 31.343 201 120 5 11 204 1 190 3.71e-14 74.3
MsG0880044831.01.T01 AT3G49020 25.282 443 253 14 12 395 22 445 3.92e-14 73.9
MsG0880044831.01.T01 AT2G42720 33.778 225 127 10 11 224 1 214 4.31e-14 73.9
MsG0880044831.01.T01 AT4G13960 34.518 197 111 8 11 200 1 186 7.13e-14 73.6
MsG0880044831.01.T01 AT4G13960 34.518 197 111 8 11 200 1 186 7.13e-14 73.6
MsG0880044831.01.T01 AT4G27050 24.894 470 251 19 9 394 1 452 8.06e-14 73.2
MsG0880044831.01.T01 AT4G27050 24.894 470 251 19 9 394 1 452 8.06e-14 73.2
MsG0880044831.01.T01 AT4G27050 24.894 470 251 19 9 394 1 452 8.06e-14 73.2
MsG0880044831.01.T01 AT4G27050 24.894 470 251 19 9 394 1 452 8.06e-14 73.2
MsG0880044831.01.T01 AT4G27050 24.894 470 251 19 9 394 1 452 8.06e-14 73.2
MsG0880044831.01.T01 AT5G56400 26.813 455 232 20 11 395 32 455 8.64e-14 73.2
MsG0880044831.01.T01 AT3G44810 33.488 215 130 5 17 224 12 220 1.12e-13 72.8
MsG0880044831.01.T01 AT5G50270 29.245 424 205 17 11 364 1 399 1.15e-13 72.4
MsG0880044831.01.T01 AT5G22660 36.869 198 95 11 12 200 13 189 1.16e-13 71.6
MsG0880044831.01.T01 AT1G21990 33.679 193 112 5 12 200 9 189 1.48e-13 72.4
MsG0880044831.01.T01 AT4G15060 32.836 201 116 6 11 204 25 213 1.53e-13 72.0
MsG0880044831.01.T01 AT5G53640 29.319 191 117 5 12 200 22 196 1.73e-13 69.7
MsG0880044831.01.T01 AT5G22660 35.437 206 87 10 12 200 13 189 1.83e-13 72.0
MsG0880044831.01.T01 AT2G26860 26.139 417 221 11 11 360 1 397 1.85e-13 72.0
MsG0880044831.01.T01 AT2G26860 26.139 417 221 11 11 360 1 397 1.85e-13 72.0
MsG0880044831.01.T01 AT5G25850 30.846 201 113 7 9 203 17 197 1.98e-13 72.0
MsG0880044831.01.T01 AT3G26920 28.253 269 159 10 146 394 46 300 2.03e-13 70.9
MsG0880044831.01.T01 AT4G15060 32.836 201 116 6 11 204 171 359 2.57e-13 72.0
MsG0880044831.01.T01 AT3G60040 32.338 201 122 7 12 200 13 211 2.87e-13 72.0
MsG0880044831.01.T01 AT3G60040 32.338 201 122 7 12 200 233 431 3.46e-13 71.6
MsG0880044831.01.T01 AT3G60040 32.338 201 122 7 12 200 232 430 3.78e-13 71.6
MsG0880044831.01.T01 AT3G49150 33.166 199 110 9 12 200 16 201 3.80e-13 71.2
MsG0880044831.01.T01 AT3G60040 32.338 201 122 7 12 200 232 430 3.93e-13 71.6
MsG0880044831.01.T01 AT3G60040 32.338 201 122 7 12 200 230 428 4.03e-13 71.6
MsG0880044831.01.T01 AT3G26922 35.025 197 102 7 12 200 14 192 5.74e-13 69.7
MsG0880044831.01.T01 AT3G26922 35.025 197 102 7 12 200 14 192 5.74e-13 69.7
MsG0880044831.01.T01 AT3G58860 33.505 194 119 5 11 200 6 193 5.92e-13 70.5
MsG0880044831.01.T01 AT3G59240 33.333 222 129 10 12 224 8 219 8.19e-13 70.1
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 1.03e-12 69.3
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 1.03e-12 69.3
MsG0880044831.01.T01 AT1G66290 32.338 201 114 6 11 209 28 208 1.20e-12 69.7
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 1.32e-12 68.6
MsG0880044831.01.T01 AT2G29930 33.679 193 108 7 12 200 12 188 1.38e-12 69.3
MsG0880044831.01.T01 AT2G29930 33.679 193 108 7 12 200 12 188 1.38e-12 69.3
MsG0880044831.01.T01 AT3G44060 26.009 446 239 20 17 395 4 425 1.71e-12 68.9
MsG0880044831.01.T01 AT3G58900 32.663 199 114 6 11 200 1 188 1.99e-12 68.2
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 2.01e-12 68.6
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 2.01e-12 68.6
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 2.01e-12 68.6
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 2.01e-12 68.6
MsG0880044831.01.T01 AT2G42730 23.747 459 263 16 12 395 5 451 2.08e-12 68.9
MsG0880044831.01.T01 AT3G44090 24.350 423 243 15 17 387 29 426 2.15e-12 68.9
MsG0880044831.01.T01 AT3G58900 33.505 194 119 5 11 200 1 188 2.18e-12 68.9
MsG0880044831.01.T01 AT3G58900 33.505 194 119 5 11 200 1 188 2.27e-12 68.2
MsG0880044831.01.T01 AT3G58900 33.505 194 119 5 11 200 1 188 2.27e-12 68.2
MsG0880044831.01.T01 AT3G59000 26.621 293 164 11 11 265 1 280 2.31e-12 68.2
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 21 215 2.35e-12 68.6
MsG0880044831.01.T01 AT5G56410 34.928 209 117 7 11 204 1 205 2.44e-12 68.9
MsG0880044831.01.T01 AT3G58940 30.864 243 117 11 11 224 1 221 2.60e-12 68.9
MsG0880044831.01.T01 AT3G58940 30.864 243 117 11 11 224 1 221 2.60e-12 68.9
MsG0880044831.01.T01 AT5G44960 30.583 206 115 6 12 206 5 193 2.73e-12 68.2
MsG0880044831.01.T01 AT3G52680 33.495 206 105 6 8 201 17 202 4.60e-12 67.4
MsG0880044831.01.T01 AT5G02930 30.374 214 122 8 11 220 27 217 4.88e-12 67.8
MsG0880044831.01.T01 AT3G59150 32.500 200 121 8 12 204 13 205 5.03e-12 67.8
MsG0880044831.01.T01 AT1G06630 32.500 200 123 7 12 204 12 206 5.05e-12 67.8
MsG0880044831.01.T01 AT3G58930 29.386 228 139 8 11 224 1 220 5.58e-12 67.4
MsG0880044831.01.T01 AT3G58930 29.386 228 139 8 11 224 1 220 5.58e-12 67.4
MsG0880044831.01.T01 AT3G58930 29.386 228 139 8 11 224 1 220 5.58e-12 67.4
MsG0880044831.01.T01 AT1G52650 32.020 203 109 7 11 200 1 187 5.73e-12 67.4
MsG0880044831.01.T01 AT5G44850 26.510 298 178 14 116 392 51 328 8.04e-12 66.2
MsG0880044831.01.T01 AT1G66310 31.863 204 116 8 11 210 18 202 1.55e-11 66.2
MsG0880044831.01.T01 AT2G26030 30.097 206 105 9 9 199 1 182 1.90e-11 65.9
MsG0880044831.01.T01 AT2G26030 30.097 206 105 9 9 199 1 182 1.90e-11 65.9
MsG0880044831.01.T01 AT2G26030 30.097 206 105 9 9 199 1 182 2.20e-11 65.5
MsG0880044831.01.T01 AT2G29910 32.812 192 109 7 12 199 29 204 2.71e-11 65.1
MsG0880044831.01.T01 AT3G44080 25.122 410 234 17 17 392 12 382 2.91e-11 65.1
MsG0880044831.01.T01 AT2G29910 32.812 192 109 7 12 199 5 180 3.52e-11 64.7
MsG0880044831.01.T01 AT2G29910 32.812 192 109 7 12 199 5 180 3.52e-11 64.7
MsG0880044831.01.T01 AT2G29910 32.812 192 109 7 12 199 5 180 3.52e-11 64.7
MsG0880044831.01.T01 AT2G29910 32.812 192 109 7 12 199 5 180 3.52e-11 64.7
MsG0880044831.01.T01 AT3G58820 33.537 164 94 4 11 167 1 156 4.43e-11 64.7
MsG0880044831.01.T01 AT2G29910 32.812 192 109 7 12 199 5 180 4.54e-11 63.9
MsG0880044831.01.T01 AT2G29910 32.812 192 109 7 12 199 5 180 4.54e-11 63.9
MsG0880044831.01.T01 AT1G22000 26.652 454 225 18 13 392 30 449 4.99e-11 64.7
MsG0880044831.01.T01 AT5G38390 30.583 206 114 7 11 209 1 184 5.30e-11 64.3
MsG0880044831.01.T01 AT3G03040 30.964 197 125 4 11 201 1 192 6.38e-11 64.3
MsG0880044831.01.T01 AT4G13985 30.198 202 127 7 11 205 18 212 6.44e-11 64.3
MsG0880044831.01.T01 AT1G64540 31.963 219 118 10 14 225 7 201 6.87e-11 63.9
MsG0880044831.01.T01 AT1G64540 31.963 219 118 10 14 225 7 201 6.87e-11 63.9
MsG0880044831.01.T01 AT5G38396 33.663 202 114 7 11 200 1 194 8.85e-11 63.9
MsG0880044831.01.T01 AT3G26920 24.793 242 168 7 158 394 107 339 9.75e-11 63.2
MsG0880044831.01.T01 AT3G26920 24.793 242 168 7 158 394 107 339 9.75e-11 63.2
MsG0880044831.01.T01 AT5G44490 29.744 195 119 5 12 200 17 199 9.86e-11 63.5

Find 77 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTACTCGTTTCATAAT+TGG 0.067437 8:-49869514 MsG0880044831.01.T01:CDS
CCTGTTCTCCACTTTGAATT+TGG 0.129040 8:-49870184 MsG0880044831.01.T01:CDS
TGGAATGCTTAACGAAAATT+TGG 0.160643 8:-49869153 MsG0880044831.01.T01:CDS
GTTCAGCATGTAAATCTTCT+AGG 0.201055 8:+49869750 None:intergenic
TTTCTCCTCATCTGTCCTTT+TGG 0.219063 8:-49870043 MsG0880044831.01.T01:CDS
GCAGAATGCGCGTCTCTTAC+AGG 0.237573 8:-49869201 MsG0880044831.01.T01:CDS
AAACTTATGAATGTAGATAT+TGG 0.247564 8:-49869881 MsG0880044831.01.T01:CDS
ATCCTTCGCAGTATCTAAAT+TGG 0.254166 8:-49869678 MsG0880044831.01.T01:CDS
GGATGGGCATTTCCATTTCT+TGG 0.265171 8:+49869319 None:intergenic
TCATTACTCGTTTCATAATT+GGG 0.328815 8:-49869513 MsG0880044831.01.T01:CDS
TGCGAAGGATTTCAACCCTT+TGG 0.345551 8:+49869691 None:intergenic
TTCTCCACTTTGAATTTGGT+TGG 0.354156 8:-49870180 MsG0880044831.01.T01:CDS
CCAAATTCAAAGTGGAGAAC+AGG 0.378621 8:+49870184 None:intergenic
AACTTATGAATGTAGATATT+GGG 0.379803 8:-49869880 MsG0880044831.01.T01:CDS
GGTTGTAGTGAAAGCGAGTT+TGG 0.379901 8:+49870246 None:intergenic
GAATTTGAAGCTTGGGAGAA+TGG 0.386871 8:+49869468 None:intergenic
ATAGAAAGAATTTGAAGCTT+GGG 0.392571 8:+49869461 None:intergenic
TCTCCACTTTGAATTTGGTT+GGG 0.394426 8:-49870179 MsG0880044831.01.T01:CDS
GTTTGAGAGATGAAAGTTAT+GGG 0.395089 8:+49869917 None:intergenic
GGATAGAATCAGCGATTTAC+CGG 0.395525 8:-49870305 MsG0880044831.01.T01:CDS
TCCTGCCCAAGGATATCTTT+AGG 0.396418 8:-49869101 MsG0880044831.01.T01:CDS
TCAAATTCTTTCTATTAGAA+AGG 0.406291 8:-49869453 MsG0880044831.01.T01:intron
ATTCAACTAAGCTTAAATGT+AGG 0.424454 8:+49869819 None:intergenic
GCATGTAAATCTTCTAGGTT+GGG 0.430172 8:+49869755 None:intergenic
TTCAACTAAGCTTAAATGTA+GGG 0.433920 8:+49869820 None:intergenic
TAGTGAAAGCGAGTTTGGTT+GGG 0.443318 8:+49870251 None:intergenic
AAAATCAGCATTACTACTGT+TGG 0.454012 8:-49869173 MsG0880044831.01.T01:CDS
TTACATCCTAAAGATATCCT+TGG 0.458474 8:+49869095 None:intergenic
TTCCTTCACCTCAACGATGA+TGG 0.468094 8:-49870329 MsG0880044831.01.T01:CDS
GGTTTGAGAGATGAAAGTTA+TGG 0.469461 8:+49869916 None:intergenic
AATAGAAAGAATTTGAAGCT+TGG 0.469472 8:+49869460 None:intergenic
ACGTATAATCATAGATCAAA+AGG 0.472302 8:-49869594 MsG0880044831.01.T01:CDS
CACCATCATCGTTGAGGTGA+AGG 0.483624 8:+49870327 None:intergenic
AGCATGTAAATCTTCTAGGT+TGG 0.484033 8:+49869754 None:intergenic
TACATCCTAAAGATATCCTT+GGG 0.489513 8:+49869096 None:intergenic
GCAGAGTGGGGTCCATCGCT+TGG 0.490439 8:+49870216 None:intergenic
TATTGCTCGCCGTGTCCAAA+AGG 0.499567 8:+49870028 None:intergenic
AGGTGTCTTCCCTGTGTTGG+CGG 0.500304 8:+49870137 None:intergenic
CAGGGAGTGAATAGCAGAGT+GGG 0.504008 8:+49870203 None:intergenic
GAAAATCTGAATGATTACAT+AGG 0.508955 8:-49869794 MsG0880044831.01.T01:CDS
TTCGCAGTATCTAAATTGGT+TGG 0.514920 8:-49869674 MsG0880044831.01.T01:CDS
ATGTGAGACAATAACTCATC+CGG 0.515295 8:+49870286 None:intergenic
TCCTAAAGATATCCTTGGGC+AGG 0.516789 8:+49869100 None:intergenic
CTCTAACTAACCGCCAACAC+AGG 0.517898 8:-49870147 MsG0880044831.01.T01:CDS
AAAACGGCTGAAGTGATAGA+AGG 0.520163 8:+49870117 None:intergenic
TTGGATGTGTTCTTTCGACA+TGG 0.528569 8:+49869710 None:intergenic
ACACATTCAATAACCGAGGA+TGG 0.535236 8:+49869302 None:intergenic
GTAGTGAAAGCGAGTTTGGT+TGG 0.540242 8:+49870250 None:intergenic
CAACCGTTCTTTCCAAGCGA+TGG 0.541913 8:-49870228 MsG0880044831.01.T01:CDS
TAAAGATATCCTTGGGCAGG+AGG 0.560715 8:+49869103 None:intergenic
GGCGAAAGAGCGTCGTGTAG+AGG 0.567602 8:-49869975 MsG0880044831.01.T01:CDS
GTCGAAAGAACACATCCAAA+GGG 0.571504 8:-49869706 MsG0880044831.01.T01:CDS
GCATGAGAGTGTCTACAAAA+CGG 0.575934 8:+49870101 None:intergenic
ACAGTCACATCTTCAATGCA+TGG 0.577572 8:-49870006 MsG0880044831.01.T01:CDS
CAAATTCAAAGTGGAGAACA+GGG 0.580805 8:+49870185 None:intergenic
CTTCACCTCAACGATGATGG+TGG 0.582283 8:-49870326 MsG0880044831.01.T01:CDS
AGAAGGTGTCTTCCCTGTGT+TGG 0.591644 8:+49870134 None:intergenic
GAAATGGAAATGCCCATCCT+CGG 0.592796 8:-49869315 MsG0880044831.01.T01:CDS
CATAAGTTTGAGAACAACAA+GGG 0.593922 8:+49869895 None:intergenic
CTTCAATGCATGGTTTGAAG+CGG 0.594174 8:-49869996 MsG0880044831.01.T01:CDS
CACATTCAATAACCGAGGAT+GGG 0.595385 8:+49869303 None:intergenic
TGTCGAAAGAACACATCCAA+AGG 0.595447 8:-49869707 MsG0880044831.01.T01:CDS
GGTCCATCGCTTGGAAAGAA+CGG 0.596238 8:+49870225 None:intergenic
TTAAAATAGTACATGATCTG+AGG 0.605518 8:+49869270 None:intergenic
AAGAACTGTCCTCCTGCCCA+AGG 0.605761 8:-49869112 MsG0880044831.01.T01:CDS
ATCATCGTTGAGGTGAAGGA+AGG 0.606297 8:+49870331 None:intergenic
TCTAACTAACCGCCAACACA+GGG 0.614745 8:-49870146 MsG0880044831.01.T01:CDS
AACCAATTTAGATACTGCGA+AGG 0.617523 8:+49869676 None:intergenic
TCTCCCAACCAAATTCAAAG+TGG 0.623338 8:+49870176 None:intergenic
TGGAGCTAGTATCAACGTGA+TGG 0.635562 8:-49869654 MsG0880044831.01.T01:CDS
TCTATCCACCATCATCGTTG+AGG 0.647856 8:+49870321 None:intergenic
CGTGTCCAAAAGGACAGATG+AGG 0.650871 8:+49870038 None:intergenic
TCATAAGTTTGAGAACAACA+AGG 0.651013 8:+49869894 None:intergenic
GAGGTGAAGGAAGGAACCAA+TGG 0.659986 8:+49870340 None:intergenic
ACAGGGAGTGAATAGCAGAG+TGG 0.663155 8:+49870202 None:intergenic
TGAAACACATTCAATAACCG+AGG 0.679647 8:+49869298 None:intergenic
AGGGAGTGAATAGCAGAGTG+GGG 0.713278 8:+49870204 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTTATGAATGTAGATAT+TGG - Chr8:49869535-49869554 MsG0880044831.01.T01:CDS 20.0%
!! AACTTATGAATGTAGATATT+GGG - Chr8:49869536-49869555 MsG0880044831.01.T01:CDS 20.0%
!! ATAAAAATTTCTCCAAGAAA+TGG - Chr8:49870085-49870104 MsG0880044831.01.T01:CDS 20.0%
!! TCAAATTCTTTCTATTAGAA+AGG - Chr8:49869963-49869982 MsG0880044831.01.T01:CDS 20.0%
!!! TGTACTATTTTAAACTTAGA+AGG - Chr8:49870156-49870175 MsG0880044831.01.T01:CDS 20.0%
! ACGAAAATTTGGAAAAAAGT+AGG - Chr8:49870274-49870293 MsG0880044831.01.T01:CDS 25.0%
! ACGTATAATCATAGATCAAA+AGG - Chr8:49869822-49869841 MsG0880044831.01.T01:CDS 25.0%
! ATTCAACTAAGCTTAAATGT+AGG + Chr8:49869600-49869619 None:intergenic 25.0%
! GAAAATCTGAATGATTACAT+AGG - Chr8:49869622-49869641 MsG0880044831.01.T01:CDS 25.0%
! TCATTACTCGTTTCATAATT+GGG - Chr8:49869903-49869922 MsG0880044831.01.T01:CDS 25.0%
! TTAAAATAGTACATGATCTG+AGG + Chr8:49870149-49870168 None:intergenic 25.0%
! TTCAACTAAGCTTAAATGTA+GGG + Chr8:49869599-49869618 None:intergenic 25.0%
!! AATAGAAAGAATTTGAAGCT+TGG + Chr8:49869959-49869978 None:intergenic 25.0%
!! ATAGAAAGAATTTGAAGCTT+GGG + Chr8:49869958-49869977 None:intergenic 25.0%
!!! TATTTTAAACTTAGAAGGCT+CGG - Chr8:49870161-49870180 MsG0880044831.01.T01:CDS 25.0%
AAAATCAGCATTACTACTGT+TGG - Chr8:49870243-49870262 MsG0880044831.01.T01:CDS 30.0%
CATAAGTTTGAGAACAACAA+GGG + Chr8:49869524-49869543 None:intergenic 30.0%
CTCATTACTCGTTTCATAAT+TGG - Chr8:49869902-49869921 MsG0880044831.01.T01:CDS 30.0%
GTTTGAGAGATGAAAGTTAT+GGG + Chr8:49869502-49869521 None:intergenic 30.0%
TACATCCTAAAGATATCCTT+GGG + Chr8:49870323-49870342 None:intergenic 30.0%
TCATAAGTTTGAGAACAACA+AGG + Chr8:49869525-49869544 None:intergenic 30.0%
TGGAATGCTTAACGAAAATT+TGG - Chr8:49870263-49870282 MsG0880044831.01.T01:CDS 30.0%
TTACATCCTAAAGATATCCT+TGG + Chr8:49870324-49870343 None:intergenic 30.0%
! TTGTATTTTATCTCCTTGAC+AGG - Chr8:49870056-49870075 MsG0880044831.01.T01:CDS 30.0%
! TTTTTATTCTTCTCCTGTCA+AGG + Chr8:49870072-49870091 None:intergenic 30.0%
!! AAAACTTTTGAGGGGTTTAT+TGG + Chr8:49869356-49869375 None:intergenic 30.0%
AACCAATTTAGATACTGCGA+AGG + Chr8:49869743-49869762 None:intergenic 35.0%
AGCATGTAAATCTTCTAGGT+TGG + Chr8:49869665-49869684 None:intergenic 35.0%
ATCCTTCGCAGTATCTAAAT+TGG - Chr8:49869738-49869757 MsG0880044831.01.T01:CDS 35.0%
ATGTGAGACAATAACTCATC+CGG + Chr8:49869133-49869152 None:intergenic 35.0%
CAAATTCAAAGTGGAGAACA+GGG + Chr8:49869234-49869253 None:intergenic 35.0%
GCATGTAAATCTTCTAGGTT+GGG + Chr8:49869664-49869683 None:intergenic 35.0%
GGTTTGAGAGATGAAAGTTA+TGG + Chr8:49869503-49869522 None:intergenic 35.0%
GTTCAGCATGTAAATCTTCT+AGG + Chr8:49869669-49869688 None:intergenic 35.0%
TCTCCACTTTGAATTTGGTT+GGG - Chr8:49869237-49869256 MsG0880044831.01.T01:CDS 35.0%
TGAAACACATTCAATAACCG+AGG + Chr8:49870121-49870140 None:intergenic 35.0%
TTCGCAGTATCTAAATTGGT+TGG - Chr8:49869742-49869761 MsG0880044831.01.T01:CDS 35.0%
TTCTCCACTTTGAATTTGGT+TGG - Chr8:49869236-49869255 MsG0880044831.01.T01:CDS 35.0%
! AGATGAGGAGAAAACTTTTG+AGG + Chr8:49869366-49869385 None:intergenic 35.0%
! AGCTTAAATGTAGGGTTTTG+AGG + Chr8:49869591-49869610 None:intergenic 35.0%
! ATGAGGAGAAAACTTTTGAG+GGG + Chr8:49869364-49869383 None:intergenic 35.0%
! ATGCTGAACAAGTCTTTTGT+AGG - Chr8:49869680-49869699 MsG0880044831.01.T01:CDS 35.0%
! GATGAGGAGAAAACTTTTGA+GGG + Chr8:49869365-49869384 None:intergenic 35.0%
!! GCTTAAATGTAGGGTTTTGA+GGG + Chr8:49869590-49869609 None:intergenic 35.0%
AAAACGGCTGAAGTGATAGA+AGG + Chr8:49869302-49869321 None:intergenic 40.0%
ACACATTCAATAACCGAGGA+TGG + Chr8:49870117-49870136 None:intergenic 40.0%
ACAGTCACATCTTCAATGCA+TGG - Chr8:49869410-49869429 MsG0880044831.01.T01:intron 40.0%
CACATTCAATAACCGAGGAT+GGG + Chr8:49870116-49870135 None:intergenic 40.0%
CCAAATTCAAAGTGGAGAAC+AGG + Chr8:49869235-49869254 None:intergenic 40.0%
CCTGTTCTCCACTTTGAATT+TGG - Chr8:49869232-49869251 MsG0880044831.01.T01:CDS 40.0%
CTTCAATGCATGGTTTGAAG+CGG - Chr8:49869420-49869439 MsG0880044831.01.T01:intron 40.0%
GGATAGAATCAGCGATTTAC+CGG - Chr8:49869111-49869130 MsG0880044831.01.T01:CDS 40.0%
GTCGAAAGAACACATCCAAA+GGG - Chr8:49869710-49869729 MsG0880044831.01.T01:CDS 40.0%
TAGTGAAAGCGAGTTTGGTT+GGG + Chr8:49869168-49869187 None:intergenic 40.0%
TCTCCCAACCAAATTCAAAG+TGG + Chr8:49869243-49869262 None:intergenic 40.0%
TGTCGAAAGAACACATCCAA+AGG - Chr8:49869709-49869728 MsG0880044831.01.T01:CDS 40.0%
TTGGATGTGTTCTTTCGACA+TGG + Chr8:49869709-49869728 None:intergenic 40.0%
! GAATTTGAAGCTTGGGAGAA+TGG + Chr8:49869951-49869970 None:intergenic 40.0%
! TTTCTCCTCATCTGTCCTTT+TGG - Chr8:49869373-49869392 MsG0880044831.01.T01:intron 40.0%
!! GCATGAGAGTGTCTACAAAA+CGG + Chr8:49869318-49869337 None:intergenic 40.0%
!!! AAATGTAGGGTTTTGAGGGA+GGG + Chr8:49869586-49869605 None:intergenic 40.0%
!!! TAAATGTAGGGTTTTGAGGG+AGG + Chr8:49869587-49869606 None:intergenic 40.0%
ATCATCGTTGAGGTGAAGGA+AGG + Chr8:49869088-49869107 None:intergenic 45.0%
GAAATGGAAATGCCCATCCT+CGG - Chr8:49870101-49870120 MsG0880044831.01.T01:CDS 45.0%
GGATGGGCATTTCCATTTCT+TGG + Chr8:49870100-49870119 None:intergenic 45.0%
GGTTGTAGTGAAAGCGAGTT+TGG + Chr8:49869173-49869192 None:intergenic 45.0%
GTAGTGAAAGCGAGTTTGGT+TGG + Chr8:49869169-49869188 None:intergenic 45.0%
TAAAGATATCCTTGGGCAGG+AGG + Chr8:49870316-49870335 None:intergenic 45.0%
TCCTAAAGATATCCTTGGGC+AGG + Chr8:49870319-49870338 None:intergenic 45.0%
TCCTGCCCAAGGATATCTTT+AGG - Chr8:49870315-49870334 MsG0880044831.01.T01:CDS 45.0%
TCTAACTAACCGCCAACACA+GGG - Chr8:49869270-49869289 MsG0880044831.01.T01:CDS 45.0%
TCTATCCACCATCATCGTTG+AGG + Chr8:49869098-49869117 None:intergenic 45.0%
TGCGAAGGATTTCAACCCTT+TGG + Chr8:49869728-49869747 None:intergenic 45.0%
TGGAGCTAGTATCAACGTGA+TGG - Chr8:49869762-49869781 MsG0880044831.01.T01:CDS 45.0%
TTCCTTCACCTCAACGATGA+TGG - Chr8:49869087-49869106 MsG0880044831.01.T01:CDS 45.0%
! CTCATCTGTCCTTTTGGACA+CGG - Chr8:49869379-49869398 MsG0880044831.01.T01:intron 45.0%
ACAGGGAGTGAATAGCAGAG+TGG + Chr8:49869217-49869236 None:intergenic 50.0%
AGGGAGTGAATAGCAGAGTG+GGG + Chr8:49869215-49869234 None:intergenic 50.0%
CAACCGTTCTTTCCAAGCGA+TGG - Chr8:49869188-49869207 MsG0880044831.01.T01:CDS 50.0%
CACCATCATCGTTGAGGTGA+AGG + Chr8:49869092-49869111 None:intergenic 50.0%
CAGGGAGTGAATAGCAGAGT+GGG + Chr8:49869216-49869235 None:intergenic 50.0%
CGTGTCCAAAAGGACAGATG+AGG + Chr8:49869381-49869400 None:intergenic 50.0%
CTCTAACTAACCGCCAACAC+AGG - Chr8:49869269-49869288 MsG0880044831.01.T01:CDS 50.0%
GGTCCATCGCTTGGAAAGAA+CGG + Chr8:49869194-49869213 None:intergenic 50.0%
TATTGCTCGCCGTGTCCAAA+AGG + Chr8:49869391-49869410 None:intergenic 50.0%
! CTTCACCTCAACGATGATGG+TGG - Chr8:49869090-49869109 MsG0880044831.01.T01:CDS 50.0%
!! AGAAGGTGTCTTCCCTGTGT+TGG + Chr8:49869285-49869304 None:intergenic 50.0%
AAGAACTGTCCTCCTGCCCA+AGG - Chr8:49870304-49870323 MsG0880044831.01.T01:CDS 55.0%
AGGTGTCTTCCCTGTGTTGG+CGG + Chr8:49869282-49869301 None:intergenic 55.0%
GCAGAATGCGCGTCTCTTAC+AGG - Chr8:49870215-49870234 MsG0880044831.01.T01:CDS 55.0%
!! GGCGAAAGAGCGTCGTGTAG+AGG - Chr8:49869441-49869460 MsG0880044831.01.T01:intron 60.0%
GCAGAGTGGGGTCCATCGCT+TGG + Chr8:49869203-49869222 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 49869079 49870359 49869079 ID=MsG0880044831.01;Name=MsG0880044831.01
Chr8 mRNA 49869079 49870359 49869079 ID=MsG0880044831.01.T01;Parent=MsG0880044831.01;Name=MsG0880044831.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|1|1|2|0|395
Chr8 exon 49869454 49870359 49869454 ID=MsG0880044831.01.T01:exon:20845;Parent=MsG0880044831.01.T01
Chr8 exon 49869079 49869360 49869079 ID=MsG0880044831.01.T01:exon:20844;Parent=MsG0880044831.01.T01
Chr8 CDS 49869454 49870359 49869454 ID=MsG0880044831.01.T01:cds;Parent=MsG0880044831.01.T01
Chr8 CDS 49869079 49869360 49869079 ID=MsG0880044831.01.T01:cds;Parent=MsG0880044831.01.T01
Gene Sequence

>MsG0880044831.01.T01

TTGGTTCCTTCCTTCACCTCAACGATGATGGTGGATAGAATCAGCGATTTACCGGATGAGTTATTGTCTCACATTCTCTCTTTTCTCCCAACCAAACTCGCTTTCACTACAACCGTTCTTTCCAAGCGATGGACCCCACTCTGCTATTCACTCCCTGTTCTCCACTTTGAATTTGGTTGGGAGAACTTGTCTCTAACTAACCGCCAACACAGGGAAGACACCTTCTATCACTTCAGCCGTTTTGTAGACACTCTCATGCTCTCTCATCTTTCAACCAATAAACCCCTCAAAAGTTTTCTCCTCATCTGTCCTTTTGGACACGGCGAGCAATACAGTCACATCTTCAATGCATGGTTTGAAGCGGCGAAAGAGCGTCGTGTAGAGGAGTTTCATTTTACTATGTTGTTTCACGACTTAAATCCCATAACTTTCATCTCTCAAACCCTTGTTGTTCTCAAACTTATGAATGTAGATATTGGGAATGATACTTCATGTGTTGATCTTCCCTCCCTCAAAACCCTACATTTAAGCTTAGTTGAATTTGAAAATCTGAATGATTACATAGGTTTTCTTTCTGCTTGTCCCAACCTAGAAGATTTACATGCTGAACAAGTCTTTTGTAGGAAACCATGTCGAAAGAACACATCCAAAGGGTTGAAATCCTTCGCAGTATCTAAATTGGTTGGAGCTAGTATCAACGTGATGGATGCTCACTTTAATGTCATTAAAAATGTCAAGTTTCTACGTATAATCATAGATCAAAAGGAGTCTTTCAAAGTCATTCATGTGTTTTCAAAGTTAATTCATATTGATCTGTCATTTTCTCATTACTCGTTTCATAATTGGGATCGTGTAGTTCAACTGCTCTGCCATTCTCCCAAGCTTCAAATTCTTTCTATTAGAAAGGAGAAGAATAAAAATTTCTCCAAGAAATGGAAATGCCCATCCTCGGTTATTGAATGTGTTTCATCTCACCTCAGATCATGTACTATTTTAAACTTAGAAGGCTCGGCAAATGATCTTCGATTTACACAATATATTTTGCAGAATGCGCGTCTCTTACAGGACATGAAAATCAGCATTACTACTGTTGGAATGCTTAACGAAAATTTGGAAAAAAGTAGGATTCTAGAAGAACTGTCCTCCTGCCCAAGGATATCTTTAGGATGTAAACTTTCATTTGAATGA

Protein sequence

>MsG0880044831.01.T01

LVPSFTSTMMVDRISDLPDELLSHILSFLPTKLAFTTTVLSKRWTPLCYSLPVLHFEFGWENLSLTNRQHREDTFYHFSRFVDTLMLSHLSTNKPLKSFLLICPFGHGEQYSHIFNAWFEAAKERRVEEFHFTMLFHDLNPITFISQTLVVLKLMNVDIGNDTSCVDLPSLKTLHLSLVEFENLNDYIGFLSACPNLEDLHAEQVFCRKPCRKNTSKGLKSFAVSKLVGASINVMDAHFNVIKNVKFLRIIIDQKESFKVIHVFSKLIHIDLSFSHYSFHNWDRVVQLLCHSPKLQILSIRKEKNKNFSKKWKCPSSVIECVSSHLRSCTILNLEGSANDLRFTQYILQNARLLQDMKISITTVGMLNENLEKSRILEELSSCPRISLGCKLSFE*