AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006687.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006687.01.T01 MTR_6g022500 85.957 235 33 0 5 239 197 431 2.58e-146 417
MsG0280006687.01.T01 MTR_1g085120 61.017 236 88 1 8 239 191 426 2.16e-96 290
MsG0280006687.01.T01 MTR_1g085120 61.017 236 88 1 8 239 266 501 1.39e-95 290
MsG0280006687.01.T01 MTR_4g039440 58.264 242 95 2 4 239 123 364 1.26e-88 268
MsG0280006687.01.T01 MTR_6g022520 60.759 237 88 1 8 239 32 268 1.56e-85 257
MsG0280006687.01.T01 MTR_6g011460 58.621 232 93 2 8 239 145 373 1.60e-85 261
MsG0280006687.01.T01 MTR_7g055943 56.017 241 94 5 8 239 139 376 5.72e-76 236
MsG0280006687.01.T01 MTR_6g022360 53.556 239 106 3 7 241 128 365 6.32e-74 231
MsG0280006687.01.T01 MTR_1g085120 60.733 191 71 1 8 194 278 468 1.76e-70 223
MsG0280006687.01.T01 MTR_1g066830 51.046 239 109 4 7 239 105 341 4.20e-64 204
MsG0280006687.01.T01 MTR_5g073420 47.881 236 108 7 7 239 109 332 1.45e-62 201
MsG0280006687.01.T01 MTR_1089s0010 48.305 236 114 5 5 239 103 331 7.09e-61 196
MsG0280006687.01.T01 MTR_5g058000 50.211 237 107 5 7 241 104 331 4.88e-58 189
MsG0280006687.01.T01 MTR_6g044572 47.521 242 98 4 5 241 125 342 7.64e-58 189
MsG0280006687.01.T01 MTR_5g058100 47.899 238 119 5 5 239 103 338 6.66e-57 186
MsG0280006687.01.T01 MTR_6g044560 47.521 242 98 4 5 241 301 518 7.39e-56 187
MsG0280006687.01.T01 MTR_6g040270 44.444 234 124 4 7 239 105 333 7.32e-53 176
MsG0280006687.01.T01 MTR_5g076150 45.249 221 95 6 18 216 11 227 2.14e-46 154
MsG0280006687.01.T01 MTR_6g045333 36.364 264 148 7 3 248 156 417 1.69e-40 144
MsG0280006687.01.T01 MTR_0009s0080 37.860 243 142 5 7 241 116 357 3.52e-40 143
MsG0280006687.01.T01 MTR_5g007410 34.286 245 153 5 5 241 121 365 3.99e-38 138
MsG0280006687.01.T01 MTR_1g108820 36.145 249 142 7 4 239 96 340 9.34e-37 133
MsG0280006687.01.T01 MTR_3g071850 35.081 248 148 6 3 239 119 364 1.86e-35 134
MsG0280006687.01.T01 MTR_5g061680 40.826 218 94 7 7 220 109 295 7.84e-35 127
MsG0280006687.01.T01 MTR_7g026500 35.600 250 135 7 8 239 111 352 1.33e-34 128
MsG0280006687.01.T01 MTR_5g045170 35.537 242 142 8 8 239 109 346 1.11e-32 123
MsG0280006687.01.T01 MTR_6g033095 41.791 201 55 4 41 239 32 172 2.05e-32 117
MsG0280006687.01.T01 MTR_5g039470 36.179 246 139 6 7 239 79 319 3.25e-31 117
MsG0280006687.01.T01 MTR_5g073370 33.865 251 142 8 4 239 94 335 8.57e-30 115
MsG0280006687.01.T01 MTR_1g059860 31.734 271 143 6 7 239 40 306 5.88e-29 111
MsG0280006687.01.T01 MTR_3g095630 44.118 136 71 2 104 239 9 139 3.74e-27 103
MsG0280006687.01.T01 MTR_1g108800 38.017 242 127 7 8 239 69 297 7.22e-27 106
MsG0280006687.01.T01 MTR_5g033200 47.287 129 63 4 111 239 11 134 1.42e-26 102
MsG0280006687.01.T01 MTR_5g054920 38.953 172 83 6 81 241 7 167 3.72e-26 101
MsG0280006687.01.T01 MTR_5g031970 31.429 245 132 7 4 239 94 311 3.99e-26 104
MsG0280006687.01.T01 MTR_5g039450 32.245 245 135 6 8 241 101 325 5.49e-26 104
MsG0280006687.01.T01 MTR_1377s0010 48.673 113 54 2 127 239 7 115 9.79e-26 98.6
MsG0280006687.01.T01 MTR_3g095600 34.884 215 80 5 28 241 103 258 4.91e-25 100
MsG0280006687.01.T01 MTR_7g034120 33.333 219 132 6 28 241 61 270 2.13e-24 99.4
MsG0280006687.01.T01 MTR_1g108820 34.804 204 119 5 4 194 96 298 2.73e-24 99.8
MsG0280006687.01.T01 MTR_2g007450 30.742 283 150 11 4 248 115 389 3.60e-24 100
MsG0280006687.01.T01 MTR_2g036470 31.600 250 153 8 4 241 110 353 4.05e-24 99.8
MsG0280006687.01.T01 MTR_5g045510 32.114 246 134 9 5 239 104 327 2.22e-23 97.4
MsG0280006687.01.T01 MTR_5g073340 32.609 230 136 9 4 219 75 299 3.48e-23 95.9
MsG0280006687.01.T01 MTR_5g063950 30.769 247 156 7 4 241 79 319 9.10e-23 95.5
MsG0280006687.01.T01 MTR_5g058350 56.322 87 38 0 5 91 77 163 1.06e-22 91.7
MsG0280006687.01.T01 MTR_7g098510 33.740 246 147 8 14 248 115 355 1.54e-22 95.5
MsG0280006687.01.T01 MTR_7g056287 33.333 255 138 9 7 245 102 340 1.60e-22 95.1
MsG0280006687.01.T01 MTR_7g098570 34.146 246 146 9 14 248 117 357 4.69e-22 94.7
MsG0280006687.01.T01 MTR_5g039490 32.353 238 130 5 7 239 120 331 7.32e-22 93.2
MsG0280006687.01.T01 MTR_3g109982 34.956 226 130 9 25 241 215 432 9.36e-22 94.4
MsG0280006687.01.T01 MTR_7g088260 31.200 250 151 8 5 241 179 420 1.09e-21 93.6
MsG0280006687.01.T01 MTR_3g023630 32.400 250 148 8 9 248 104 342 1.57e-21 92.4
MsG0280006687.01.T01 MTR_4g098590 31.496 254 148 8 7 241 98 344 1.62e-21 92.4
MsG0280006687.01.T01 MTR_3g087260 34.043 235 139 6 15 239 184 412 2.78e-21 92.4
MsG0280006687.01.T01 MTR_7g056277 33.333 255 138 9 7 245 358 596 5.14e-21 92.0
MsG0280006687.01.T01 MTR_3g071790 29.444 180 118 4 68 239 18 196 7.26e-21 87.4
MsG0280006687.01.T01 MTR_7g033990 30.928 194 120 6 52 241 158 341 8.68e-20 87.8
MsG0280006687.01.T01 MTR_7g056433 32.258 248 137 10 11 239 109 344 9.11e-20 87.8
MsG0280006687.01.T01 MTR_7g115270 30.040 253 150 8 11 239 108 357 1.86e-19 86.7
MsG0280006687.01.T01 MTR_3g107160 27.347 245 163 5 7 241 107 346 2.60e-19 86.3
MsG0280006687.01.T01 MTR_0543s0010 33.898 236 133 10 14 239 183 405 2.68e-19 86.7
MsG0280006687.01.T01 MTR_0492s0020 33.613 238 135 10 14 241 183 407 2.86e-19 86.7
MsG0280006687.01.T01 MTR_2g007500 29.719 249 142 8 8 231 95 335 3.08e-19 85.5
MsG0280006687.01.T01 MTR_3g108150 31.076 251 154 8 5 241 99 344 3.25e-19 85.9
MsG0280006687.01.T01 MTR_2g007400 28.916 249 144 9 2 226 108 347 4.07e-19 85.9
MsG0280006687.01.T01 MTR_7g007080 29.787 235 147 8 5 229 104 330 5.00e-19 85.5
MsG0280006687.01.T01 MTR_5g008920 34.052 232 139 9 15 239 114 338 5.81e-19 85.5
MsG0280006687.01.T01 MTR_3g040700 31.628 215 121 8 33 239 166 362 1.22e-18 84.7
MsG0280006687.01.T01 MTR_7g098480 31.878 229 145 6 25 248 131 353 1.75e-18 84.3
MsG0280006687.01.T01 MTR_3g107120 33.838 198 116 7 52 241 164 354 1.88e-18 84.0
MsG0280006687.01.T01 MTR_5g012840 28.112 249 123 8 5 241 73 277 4.47e-18 82.0
MsG0280006687.01.T01 MTR_5g013500 29.365 252 132 8 11 239 92 320 7.44e-18 82.0
MsG0280006687.01.T01 MTR_5g008950 29.268 205 132 5 41 239 125 322 5.25e-17 79.7
MsG0280006687.01.T01 MTR_1g053025 31.452 248 141 10 2 228 99 338 7.24e-17 79.3
MsG0280006687.01.T01 MTR_3g107100 33.632 223 127 8 31 241 133 346 9.29e-17 79.3
MsG0280006687.01.T01 MTR_3g105060 29.949 197 120 4 56 248 159 341 1.11e-16 78.6
MsG0280006687.01.T01 MTR_1g041245 30.522 249 150 12 8 241 104 344 1.21e-16 78.6
MsG0280006687.01.T01 MTR_3g036250 29.146 199 118 6 56 248 153 334 1.22e-16 78.6
MsG0280006687.01.T01 MTR_1g107385 34.272 213 113 10 33 229 170 371 3.71e-16 77.4
MsG0280006687.01.T01 MTR_7g060470 30.400 250 148 9 9 239 105 347 1.07e-15 75.9
MsG0280006687.01.T01 MTR_2g005990 29.719 249 136 8 4 226 104 339 1.09e-15 75.9
MsG0280006687.01.T01 MTR_3g108560 29.098 244 163 6 3 239 104 344 1.36e-15 75.9
MsG0280006687.01.T01 MTR_2g008320 32.547 212 122 8 28 226 168 371 1.58e-15 75.9
MsG0280006687.01.T01 MTR_7g075820 29.545 264 151 11 2 239 100 354 2.80e-15 74.7
MsG0280006687.01.T01 MTR_7g021990 29.596 223 135 7 33 241 168 382 3.69e-15 74.7
MsG0280006687.01.T01 MTR_3g082890 29.771 262 146 9 11 241 190 444 5.14e-15 74.3
MsG0280006687.01.T01 MTR_7g021950 29.596 223 135 7 33 241 168 382 6.04e-15 74.3
MsG0280006687.01.T01 MTR_7g022105 28.899 218 143 5 33 241 169 383 1.19e-14 73.2
MsG0280006687.01.T01 MTR_5g024060 42.045 88 50 1 153 239 79 166 1.93e-14 71.2
MsG0280006687.01.T01 MTR_7g056020 31.330 233 135 9 21 241 112 331 4.16e-14 71.6
MsG0280006687.01.T01 MTR_7g033915 32.353 170 103 6 76 241 162 323 4.87e-14 71.2
MsG0280006687.01.T01 MTR_3g099830 31.646 237 123 9 14 226 97 318 6.23e-14 70.9
MsG0280006687.01.T01 MTR_2g008310 31.604 212 125 8 28 227 114 317 7.44e-14 70.9
MsG0280006687.01.T01 MTR_3g110010 35.593 177 99 8 25 194 215 383 8.60e-13 68.2
MsG0280006687.01.T01 MTR_7g083740 30.660 212 110 7 50 241 133 327 1.16e-12 67.0
MsG0280006687.01.T01 MTR_7g114710 27.843 255 126 10 15 248 114 331 2.56e-12 66.2
MsG0280006687.01.T01 MTR_2g007360 29.487 234 127 11 20 226 94 316 8.22e-12 64.7
MsG0280006687.01.T01 MTR_5g083890 31.455 213 116 11 33 226 146 347 8.54e-12 64.7
MsG0280006687.01.T01 MTR_7g007340 31.140 228 119 10 18 226 93 301 1.24e-11 63.9
MsG0280006687.01.T01 MTR_7g032370 30.612 196 113 7 53 241 131 310 2.26e-11 63.2
MsG0280006687.01.T01 MTR_5g073400 40.000 100 56 3 4 101 23 120 3.78e-11 59.7
MsG0280006687.01.T01 MTR_7g007370 32.474 194 102 8 33 212 98 276 5.48e-11 62.0
MsG0280006687.01.T01 MTR_4g080610 31.959 194 122 7 56 241 124 315 8.51e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006687.01.T01 AT5G56420 26.190 294 158 11 8 248 99 386 3.26e-11 63.2
MsG0280006687.01.T01 AT5G56420 26.190 294 158 11 8 248 99 386 3.26e-11 63.2
MsG0280006687.01.T01 AT5G56420 26.190 294 158 11 8 248 99 386 3.26e-11 63.2

Find 45 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCGATTTGGAAAATAAA+TGG 0.182901 2:+4968665 None:intergenic
ACGCATCCAGGAACCGAAAT+TGG 0.193987 2:+4968167 None:intergenic
GTTTGAGAACAGCAGGAGTT+TGG 0.287433 2:+4968760 None:intergenic
AAATAATGGGATTCAATGTT+TGG 0.310571 2:+4968790 None:intergenic
AAGCTTCAAATTCTCTCTAT+TGG 0.313410 2:-4968312 MsG0280006687.01.T01:CDS
TCGTCACTCACTTCATTGTT+GGG 0.322689 2:-4968367 MsG0280006687.01.T01:CDS
AAATGCCCAATTTCGGTTCC+TGG 0.326154 2:-4968173 MsG0280006687.01.T01:CDS
ATCCTTGACATTGCCCAGTT+TGG 0.332035 2:-4968541 MsG0280006687.01.T01:CDS
GTCGTCACTCACTTCATTGT+TGG 0.333214 2:-4968368 MsG0280006687.01.T01:CDS
TGATTGCTCATCTTCATTCA+TGG 0.335813 2:-4968866 MsG0280006687.01.T01:CDS
TTGATGTAATCATTCCGATT+TGG 0.335900 2:+4968654 None:intergenic
TTTGAGAACAGCAGGAGTTT+GGG 0.337049 2:+4968761 None:intergenic
GATATTCGCTCTAACCAAAC+TGG 0.365768 2:+4968527 None:intergenic
AATTGGGCATTTCCATTCCT+TGG 0.388158 2:+4968184 None:intergenic
GGAATGGAAATGCCCAATTT+CGG 0.395851 2:-4968180 MsG0280006687.01.T01:CDS
TTTCCATTCCTTGGTTGAGC+TGG 0.397748 2:+4968193 None:intergenic
GCATGTAAATCTTCTAGAAT+AGG 0.398735 2:+4968615 None:intergenic
CGCATCCAGGAACCGAAATT+GGG 0.425515 2:+4968168 None:intergenic
GTTTGGGAGATGAAAATAAT+GGG 0.428323 2:+4968777 None:intergenic
AGTTTGGGAGATGAAAATAA+TGG 0.434465 2:+4968776 None:intergenic
AGTTCTATATGAACTAAGAT+TGG 0.439286 2:+4968399 None:intergenic
CAATGTTCGCATTATTTATG+TGG 0.444214 2:+4968583 None:intergenic
ATAGAGAGAATTTGAAGCTT+GGG 0.445729 2:+4968315 None:intergenic
AACTCAAGTTTGAGAACAGC+AGG 0.451826 2:+4968753 None:intergenic
AGAGCGAATATCAATTCAAC+AGG 0.468291 2:-4968516 MsG0280006687.01.T01:CDS
AAACTTGAGTTCTTACAACT+TGG 0.475761 2:-4968741 MsG0280006687.01.T01:CDS
GCGAACATTGCACAAGAAGA+AGG 0.490282 2:-4968570 MsG0280006687.01.T01:CDS
ATAAATGGATTTCAAATGCA+AGG 0.508417 2:+4968680 None:intergenic
AATAGAGAGAATTTGAAGCT+TGG 0.512060 2:+4968314 None:intergenic
CGTCACTCACTTCATTGTTG+GGG 0.519203 2:-4968366 MsG0280006687.01.T01:CDS
TGCAAAACGGCGTCATGTTG+AGG 0.531415 2:-4968835 MsG0280006687.01.T01:CDS
ACATTATCAATACCATAAAA+CGG 0.532777 2:+4968489 None:intergenic
AGGTGAGATGAAACGCATCC+AGG 0.533300 2:+4968155 None:intergenic
CGAACATTGCACAAGAAGAA+GGG 0.535809 2:-4968569 MsG0280006687.01.T01:CDS
CATGGCTTGAAGCTGCAAAA+CGG 0.539322 2:-4968848 MsG0280006687.01.T01:CDS
CACTCACTTCATTGTTGGGG+TGG 0.541314 2:-4968363 MsG0280006687.01.T01:CDS
TCAAATTCTCTCTATTGGCA+AGG 0.557428 2:-4968307 MsG0280006687.01.T01:intron
GAGTTACTATTTACAATCAC+AGG 0.559752 2:-4968465 MsG0280006687.01.T01:CDS
AACCAAACTGGGCAATGTCA+AGG 0.572835 2:+4968539 None:intergenic
TTTGAAGCTTGGGACAGTGA+CGG 0.595685 2:+4968325 None:intergenic
ATACCAGCTCAACCAAGGAA+TGG 0.606316 2:-4968196 MsG0280006687.01.T01:CDS
ATATTCGCTCTAACCAAACT+GGG 0.623085 2:+4968528 None:intergenic
TTAAAACAGTACATAATCTG+AGG 0.632792 2:+4968135 None:intergenic
GATGAATACCAGCTCAACCA+AGG 0.661340 2:-4968201 MsG0280006687.01.T01:CDS
GAAGCTTGGGACAGTGACGG+AGG 0.673240 2:+4968328 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTATTAATCAAAATATA+CGG + Chr2:4968688-4968707 None:intergenic 10.0%
!! ACATTATCAATACCATAAAA+CGG + Chr2:4968442-4968461 None:intergenic 20.0%
!!! AATCCATTTATTTTCCAAAT+CGG - Chr2:4968260-4968279 MsG0280006687.01.T01:intron 20.0%
!!! ATTAATACTTTTTTCTCTCT+TGG - Chr2:4968697-4968716 MsG0280006687.01.T01:CDS 20.0%
!!! TTAATACTTTTTTCTCTCTT+GGG - Chr2:4968698-4968717 MsG0280006687.01.T01:CDS 20.0%
! AGTTCTATATGAACTAAGAT+TGG + Chr2:4968532-4968551 None:intergenic 25.0%
! TTAAAACAGTACATAATCTG+AGG + Chr2:4968796-4968815 None:intergenic 25.0%
!! AAATAATGGGATTCAATGTT+TGG + Chr2:4968141-4968160 None:intergenic 25.0%
!! ATAAATGGATTTCAAATGCA+AGG + Chr2:4968251-4968270 None:intergenic 25.0%
!!! ATTCCGATTTGGAAAATAAA+TGG + Chr2:4968266-4968285 None:intergenic 25.0%
!!! TGTACTGTTTTAAACTTTCA+AGG - Chr2:4968803-4968822 MsG0280006687.01.T01:CDS 25.0%
AAACTTGAGTTCTTACAACT+TGG - Chr2:4968187-4968206 MsG0280006687.01.T01:CDS 30.0%
AAGCTTCAAATTCTCTCTAT+TGG - Chr2:4968616-4968635 MsG0280006687.01.T01:CDS 30.0%
AGTTTGGGAGATGAAAATAA+TGG + Chr2:4968155-4968174 None:intergenic 30.0%
CAATGTTCGCATTATTTATG+TGG + Chr2:4968348-4968367 None:intergenic 30.0%
GAGTTACTATTTACAATCAC+AGG - Chr2:4968463-4968482 MsG0280006687.01.T01:CDS 30.0%
GTTTGGGAGATGAAAATAAT+GGG + Chr2:4968154-4968173 None:intergenic 30.0%
TAGTAGTTCGTTTGTTTACT+TGG - Chr2:4968650-4968669 MsG0280006687.01.T01:CDS 30.0%
TTGATGTAATCATTCCGATT+TGG + Chr2:4968277-4968296 None:intergenic 30.0%
! AATAGAGAGAATTTGAAGCT+TGG + Chr2:4968617-4968636 None:intergenic 30.0%
! ATAGAGAGAATTTGAAGCTT+GGG + Chr2:4968616-4968635 None:intergenic 30.0%
! ATTTCAAATGCAAGGTTTTG+AGG + Chr2:4968243-4968262 None:intergenic 30.0%
!! GCATGTAAATCTTCTAGAAT+AGG + Chr2:4968316-4968335 None:intergenic 30.0%
!! TTTCAAATGCAAGGTTTTGA+GGG + Chr2:4968242-4968261 None:intergenic 30.0%
AGAGCGAATATCAATTCAAC+AGG - Chr2:4968412-4968431 MsG0280006687.01.T01:CDS 35.0%
ATATTCGCTCTAACCAAACT+GGG + Chr2:4968403-4968422 None:intergenic 35.0%
TCAAATTCTCTCTATTGGCA+AGG - Chr2:4968621-4968640 MsG0280006687.01.T01:CDS 35.0%
TGATTGCTCATCTTCATTCA+TGG - Chr2:4968062-4968081 MsG0280006687.01.T01:CDS 35.0%
AACTCAAGTTTGAGAACAGC+AGG + Chr2:4968178-4968197 None:intergenic 40.0%
AATTGGGCATTTCCATTCCT+TGG + Chr2:4968747-4968766 None:intergenic 40.0%
CGAACATTGCACAAGAAGAA+GGG - Chr2:4968359-4968378 MsG0280006687.01.T01:CDS 40.0%
GATATTCGCTCTAACCAAAC+TGG + Chr2:4968404-4968423 None:intergenic 40.0%
GGAATGGAAATGCCCAATTT+CGG - Chr2:4968748-4968767 MsG0280006687.01.T01:CDS 40.0%
TCGTCACTCACTTCATTGTT+GGG - Chr2:4968561-4968580 MsG0280006687.01.T01:CDS 40.0%
TTTGAGAACAGCAGGAGTTT+GGG + Chr2:4968170-4968189 None:intergenic 40.0%
! TCAACAGGTGATCCGTTTTA+TGG - Chr2:4968427-4968446 MsG0280006687.01.T01:CDS 40.0%
!!! AAATGCAAGGTTTTGAGGGA+TGG + Chr2:4968238-4968257 None:intergenic 40.0%
!!! TTTTTTCTCTCTTGGGACAG+TGG - Chr2:4968705-4968724 MsG0280006687.01.T01:CDS 40.0%
AAATGCCCAATTTCGGTTCC+TGG - Chr2:4968755-4968774 MsG0280006687.01.T01:CDS 45.0%
AACCAAACTGGGCAATGTCA+AGG + Chr2:4968392-4968411 None:intergenic 45.0%
ATACCAGCTCAACCAAGGAA+TGG - Chr2:4968732-4968751 MsG0280006687.01.T01:CDS 45.0%
ATCCTTGACATTGCCCAGTT+TGG - Chr2:4968387-4968406 MsG0280006687.01.T01:CDS 45.0%
CATGGCTTGAAGCTGCAAAA+CGG - Chr2:4968080-4968099 MsG0280006687.01.T01:CDS 45.0%
CGTCACTCACTTCATTGTTG+GGG - Chr2:4968562-4968581 MsG0280006687.01.T01:CDS 45.0%
GATGAATACCAGCTCAACCA+AGG - Chr2:4968727-4968746 MsG0280006687.01.T01:CDS 45.0%
GCGAACATTGCACAAGAAGA+AGG - Chr2:4968358-4968377 MsG0280006687.01.T01:CDS 45.0%
GTCGTCACTCACTTCATTGT+TGG - Chr2:4968560-4968579 MsG0280006687.01.T01:CDS 45.0%
GTTTGAGAACAGCAGGAGTT+TGG + Chr2:4968171-4968190 None:intergenic 45.0%
TTTCCATTCCTTGGTTGAGC+TGG + Chr2:4968738-4968757 None:intergenic 45.0%
! TTTGAAGCTTGGGACAGTGA+CGG + Chr2:4968606-4968625 None:intergenic 45.0%
ACGCATCCAGGAACCGAAAT+TGG + Chr2:4968764-4968783 None:intergenic 50.0%
AGGTGAGATGAAACGCATCC+AGG + Chr2:4968776-4968795 None:intergenic 50.0%
CACTCACTTCATTGTTGGGG+TGG - Chr2:4968565-4968584 MsG0280006687.01.T01:CDS 50.0%
CGCATCCAGGAACCGAAATT+GGG + Chr2:4968763-4968782 None:intergenic 50.0%
TGCAAAACGGCGTCATGTTG+AGG - Chr2:4968093-4968112 MsG0280006687.01.T01:CDS 50.0%
GAAGCTTGGGACAGTGACGG+AGG + Chr2:4968603-4968622 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 4968061 4968889 4968061 ID=MsG0280006687.01;Name=MsG0280006687.01
Chr2 mRNA 4968061 4968889 4968061 ID=MsG0280006687.01.T01;Parent=MsG0280006687.01;Name=MsG0280006687.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|248
Chr2 exon 4968308 4968889 4968308 ID=MsG0280006687.01.T01:exon:1872;Parent=MsG0280006687.01.T01
Chr2 exon 4968061 4968225 4968061 ID=MsG0280006687.01.T01:exon:1871;Parent=MsG0280006687.01.T01
Chr2 CDS 4968308 4968889 4968308 ID=MsG0280006687.01.T01:cds;Parent=MsG0280006687.01.T01
Chr2 CDS 4968061 4968225 4968061 ID=MsG0280006687.01.T01:cds;Parent=MsG0280006687.01.T01
Gene Sequence

>MsG0280006687.01.T01

ATGATTGCTCATCTTCATTCATGGCTTGAAGCTGCAAAACGGCGTCATGTTGAGGAATTACATCTCAATCTATATTTCCAAACATTGAATCCCATTATTTTCATCTCCCAAACTCCTGCTGTTCTCAAACTTGAGTTCTTACAACTTGGAATTGATACTTCGTGTGTTGATCTTCCATCCCTCAAAACCTTGCATTTGAAATCCATTTATTTTCCAAATCGGAATGATTACATCAATTTTCTTCTTTCTTGTCCTATTCTAGAAGATTTACATGCTAAATCTATCCACATAAATAATGCGAACATTGCACAAGAAGAAGGGTTTAAATCCTTGACATTGCCCAGTTTGGTTAGAGCGAATATCAATTCAACAGGTGATCCGTTTTATGGTATTGATAATGTCGAGTTACTATTTACAATCACAGGATTAATAGCTCAAGATACTATTTTCAAAGTCATTACACTGTTTCCAATCTTAGTTCATATAGAACTAGTGTTTTGTCGTCACTCACTTCATTGTTGGGGTGGTGTATTACAACTCCTCCGTCACTGTCCCAAGCTTCAAATTCTCTCTATTGGCAAGTGGATGAATACCAGCTCAACCAAGGAATGGAAATGCCCAATTTCGGTTCCTGGATGCGTTTCATCTCACCTCAGATTATGTACTGTTTTAAACTTTCAAGGCTCAATAAATGATCTTAAATTTGTAGCATATATTTGCAGAATGCAAGTCTATTACGAGACATGA
Protein sequence

>MsG0280006687.01.T01

MIAHLHSWLEAAKRRHVEELHLNLYFQTLNPIIFISQTPAVLKLEFLQLGIDTSCVDLPSLKTLHLKSIYFPNRNDYINFLLSCPILEDLHAKSIHINNANIAQEEGFKSLTLPSLVRANINSTGDPFYGIDNVELLFTITGLIAQDTIFKVITLFPILVHIELVFCRHSLHCWGGVLQLLRHCPKLQILSIGKWMNTSSTKEWKCPISVPGCVSSHLRLCTVLNFQGSINDLKFVAYICRMQVYYET*