AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027444.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027444.01.T01 MTR_1g066830 57.506 393 146 10 1 379 1 386 6.81e-133 386
MsG0580027444.01.T01 MTR_5g058000 54.404 386 163 7 1 382 1 377 1.54e-122 359
MsG0580027444.01.T01 MTR_5g058100 54.805 385 159 10 4 379 5 383 2.21e-120 354
MsG0580027444.01.T01 MTR_1089s0010 53.747 387 164 9 1 380 1 379 6.04e-115 340
MsG0580027444.01.T01 MTR_1g085120 53.608 388 157 11 8 380 92 471 2.67e-113 339
MsG0580027444.01.T01 MTR_1g085120 53.608 388 157 11 8 380 167 546 9.62e-113 340
MsG0580027444.01.T01 MTR_6g011460 53.003 383 165 10 7 380 45 421 5.53e-111 331
MsG0580027444.01.T01 MTR_6g040270 51.562 384 173 9 1 377 1 378 3.39e-108 323
MsG0580027444.01.T01 MTR_6g022500 48.586 389 177 11 7 382 100 478 4.52e-102 310
MsG0580027444.01.T01 MTR_5g073420 48.849 391 175 12 1 380 4 380 6.57e-102 306
MsG0580027444.01.T01 MTR_4g039440 49.614 389 172 13 7 380 33 412 5.42e-101 305
MsG0580027444.01.T01 MTR_7g055943 48.615 397 177 12 3 381 35 422 1.81e-99 302
MsG0580027444.01.T01 MTR_6g022360 47.028 387 170 13 7 379 42 407 4.29e-93 285
MsG0580027444.01.T01 MTR_3g095600 45.161 372 117 12 6 371 2 292 3.53e-80 248
MsG0580027444.01.T01 MTR_1g085120 53.061 294 122 7 8 289 179 468 3.42e-78 248
MsG0580027444.01.T01 MTR_1g108820 43.577 397 190 15 1 377 1 383 6.60e-77 243
MsG0580027444.01.T01 MTR_7g026500 39.950 403 203 12 1 379 7 394 1.85e-76 242
MsG0580027444.01.T01 MTR_6g045333 39.196 398 215 10 2 379 55 445 1.41e-75 241
MsG0580027444.01.T01 MTR_5g061680 46.349 315 133 11 6 313 9 294 1.82e-71 227
MsG0580027444.01.T01 MTR_5g045170 40.704 398 193 14 4 377 10 388 1.21e-70 227
MsG0580027444.01.T01 MTR_5g007410 38.360 378 213 9 10 372 28 400 1.51e-70 228
MsG0580027444.01.T01 MTR_6g044572 40.146 411 186 15 7 380 1 388 1.14e-69 224
MsG0580027444.01.T01 MTR_0009s0080 39.487 390 213 10 1 374 11 393 2.25e-68 222
MsG0580027444.01.T01 MTR_6g022520 45.988 324 145 11 76 380 1 313 3.29e-68 218
MsG0580027444.01.T01 MTR_6g044560 40.194 413 187 15 5 380 175 564 4.71e-68 225
MsG0580027444.01.T01 MTR_3g071850 38.131 396 214 11 3 376 19 405 2.03e-67 228
MsG0580027444.01.T01 MTR_5g058350 63.131 198 40 3 1 194 1 169 6.02e-64 202
MsG0580027444.01.T01 MTR_1g108800 41.221 393 161 14 1 377 1 339 6.91e-59 194
MsG0580027444.01.T01 MTR_5g076150 54.167 216 75 6 116 309 11 224 9.70e-58 188
MsG0580027444.01.T01 MTR_5g039450 36.082 388 202 10 4 378 2 356 1.66e-57 191
MsG0580027444.01.T01 MTR_2g036470 35.696 395 226 10 2 377 8 393 6.03e-57 191
MsG0580027444.01.T01 MTR_1g108820 42.997 307 148 11 1 289 1 298 7.46e-56 187
MsG0580027444.01.T01 MTR_1g041245 34.729 406 214 16 2 380 5 386 8.59e-56 188
MsG0580027444.01.T01 MTR_5g039470 37.838 333 188 8 24 342 1 328 1.63e-55 186
MsG0580027444.01.T01 MTR_5g045510 35.878 393 198 13 6 377 10 369 1.95e-55 187
MsG0580027444.01.T01 MTR_5g073370 38.918 388 202 16 8 376 5 376 2.40e-55 187
MsG0580027444.01.T01 MTR_5g039490 37.113 388 202 12 3 377 15 373 6.62e-54 182
MsG0580027444.01.T01 MTR_5g031970 34.817 382 201 7 4 377 12 353 2.89e-53 180
MsG0580027444.01.T01 MTR_3g095630 58.757 177 65 6 198 371 5 176 1.53e-51 171
MsG0580027444.01.T01 MTR_7g088260 33.933 389 224 14 8 380 91 462 2.72e-49 172
MsG0580027444.01.T01 MTR_5g063950 32.995 394 214 8 1 378 1 360 6.16e-48 167
MsG0580027444.01.T01 MTR_7g033915 33.333 396 210 14 2 379 5 364 2.34e-47 165
MsG0580027444.01.T01 MTR_7g033990 36.735 392 206 14 2 372 5 375 1.35e-46 164
MsG0580027444.01.T01 MTR_7g056433 33.167 401 217 14 8 380 12 389 5.67e-45 159
MsG0580027444.01.T01 MTR_3g107100 35.891 404 223 13 8 383 11 406 8.63e-45 159
MsG0580027444.01.T01 MTR_7g056287 35.641 390 214 18 8 380 3 372 8.65e-45 159
MsG0580027444.01.T01 MTR_7g034115 34.309 376 213 16 7 365 10 368 1.09e-44 159
MsG0580027444.01.T01 MTR_5g065100 34.828 379 192 13 13 379 13 348 4.15e-44 158
MsG0580027444.01.T01 MTR_7g056277 35.567 388 217 17 8 380 259 628 7.02e-44 161
MsG0580027444.01.T01 MTR_7g098510 32.995 394 237 11 1 380 11 391 2.22e-43 155
MsG0580027444.01.T01 MTR_3g108150 33.418 392 223 14 8 379 13 386 1.26e-42 153
MsG0580027444.01.T01 MTR_7g032380 32.564 390 206 13 6 380 9 356 1.39e-42 152
MsG0580027444.01.T01 MTR_3g107120 33.171 410 216 11 3 378 4 389 2.37e-42 153
MsG0580027444.01.T01 MTR_5g033200 52.410 166 73 5 209 371 11 173 4.71e-42 145
MsG0580027444.01.T01 MTR_5g073340 36.190 315 149 10 1 299 1 279 1.75e-41 148
MsG0580027444.01.T01 MTR_5g083890 33.976 415 213 17 8 378 6 403 3.23e-41 152
MsG0580027444.01.T01 MTR_2g007450 31.529 425 219 13 5 377 13 417 7.54e-40 146
MsG0580027444.01.T01 MTR_7g115270 31.172 401 232 15 8 377 12 399 8.79e-40 146
MsG0580027444.01.T01 MTR_3g099830 33.249 397 209 15 4 377 8 371 1.20e-39 145
MsG0580027444.01.T01 MTR_2g007400 33.090 411 220 17 4 377 8 400 3.90e-39 144
MsG0580027444.01.T01 MTR_7g098480 34.190 389 221 16 1 372 11 381 4.85e-39 145
MsG0580027444.01.T01 MTR_7g098570 32.143 392 234 13 1 375 12 388 1.77e-38 144
MsG0580027444.01.T01 MTR_3g107160 30.155 388 242 10 8 380 10 383 3.22e-38 141
MsG0580027444.01.T01 MTR_1377s0010 54.962 131 55 3 223 351 5 133 7.96e-38 133
MsG0580027444.01.T01 MTR_3g105060 29.716 387 243 11 2 380 8 373 1.01e-37 140
MsG0580027444.01.T01 MTR_3g023630 31.215 362 215 11 1 345 1 345 6.00e-37 137
MsG0580027444.01.T01 MTR_1g053025 33.580 405 218 18 7 378 1 387 1.18e-36 137
MsG0580027444.01.T01 MTR_3g467400 30.075 399 221 13 7 380 2 367 2.10e-36 136
MsG0580027444.01.T01 MTR_3g036250 32.570 393 210 15 7 377 4 363 2.17e-36 136
MsG0580027444.01.T01 MTR_7g075820 31.566 415 214 17 6 377 4 391 3.61e-36 136
MsG0580027444.01.T01 MTR_7g007340 34.819 359 179 15 4 345 9 329 5.90e-36 135
MsG0580027444.01.T01 MTR_5g054920 41.872 203 96 7 173 364 2 193 8.22e-36 130
MsG0580027444.01.T01 MTR_3g095640 46.707 167 76 6 1 156 11 175 8.61e-36 129
MsG0580027444.01.T01 MTR_2g008310 33.240 358 205 12 7 345 1 343 1.24e-35 134
MsG0580027444.01.T01 MTR_7g007080 32.741 394 220 16 8 377 4 376 1.51e-35 134
MsG0580027444.01.T01 MTR_2g005990 31.796 412 222 15 4 377 2 392 2.00e-35 134
MsG0580027444.01.T01 MTR_3g108560 32.225 391 224 17 8 379 20 388 6.01e-35 132
MsG0580027444.01.T01 MTR_3g082890 30.900 411 231 15 4 380 93 484 5.65e-34 132
MsG0580027444.01.T01 MTR_3g040700 33.898 354 186 15 5 337 40 366 8.55e-34 130
MsG0580027444.01.T01 MTR_2g008320 30.521 403 225 15 4 377 48 424 9.30e-34 130
MsG0580027444.01.T01 MTR_0543s0010 32.727 385 225 13 8 379 86 449 9.87e-34 130
MsG0580027444.01.T01 MTR_0492s0020 33.903 351 200 12 8 345 86 417 8.82e-33 127
MsG0580027444.01.T01 MTR_7g032370 30.933 375 215 16 23 380 5 352 1.07e-32 125
MsG0580027444.01.T01 MTR_7g114710 30.633 395 213 14 6 380 11 364 1.48e-32 125
MsG0580027444.01.T01 MTR_7g034120 33.754 317 174 14 85 381 9 309 2.77e-32 124
MsG0580027444.01.T01 MTR_7g083740 32.754 403 191 16 6 379 15 366 5.49e-32 124
MsG0580027444.01.T01 MTR_4g098590 31.332 383 226 13 10 365 1 373 6.16e-32 124
MsG0580027444.01.T01 MTR_6g022390 52.273 132 54 3 7 130 4 134 8.50e-32 118
MsG0580027444.01.T01 MTR_5g008920 28.856 402 245 13 1 381 1 382 3.01e-31 122
MsG0580027444.01.T01 MTR_3g082890 29.018 448 228 16 4 380 13 441 3.26e-31 123
MsG0580027444.01.T01 MTR_7g060470 30.414 411 228 14 8 382 3 391 4.23e-31 122
MsG0580027444.01.T01 MTR_2g007360 33.168 404 200 22 4 377 8 371 1.99e-30 120
MsG0580027444.01.T01 MTR_1g059860 32.248 307 157 7 78 337 8 310 2.34e-30 119
MsG0580027444.01.T01 MTR_1g107385 30.676 414 224 17 5 377 29 420 9.70e-30 119
MsG0580027444.01.T01 MTR_5g012840 30.028 363 183 12 32 380 13 318 2.19e-29 116
MsG0580027444.01.T01 MTR_5g061410 32.776 299 154 10 5 289 2 267 1.78e-27 110
MsG0580027444.01.T01 MTR_3g026920 28.972 428 206 17 7 378 18 403 1.12e-26 110
MsG0580027444.01.T01 MTR_5g008950 27.179 390 242 12 10 381 1 366 1.15e-26 109
MsG0580027444.01.T01 MTR_2g007500 31.429 350 192 11 2 325 8 335 1.21e-26 108
MsG0580027444.01.T01 MTR_3g108560 34.247 292 160 13 8 285 20 293 1.46e-26 108
MsG0580027444.01.T01 MTR_7g056020 30.000 360 206 10 8 350 16 346 9.22e-26 109
MsG0580027444.01.T01 MTR_7g056447 40.984 183 97 5 8 185 9 185 1.69e-25 105
MsG0580027444.01.T01 MTR_3g087260 34.351 262 157 9 127 379 201 456 2.84e-25 107
MsG0580027444.01.T01 MTR_3g087260 38.298 188 87 5 8 189 12 176 2.60e-19 89.7
MsG0580027444.01.T01 MTR_3g109982 34.386 285 163 9 8 285 13 280 3.00e-25 108
MsG0580027444.01.T01 MTR_3g109982 32.677 254 150 9 131 372 224 468 1.05e-18 88.6
MsG0580027444.01.T01 MTR_3g110010 34.386 285 163 9 8 285 13 280 3.25e-25 108
MsG0580027444.01.T01 MTR_3g110010 34.066 182 102 6 131 304 224 395 5.81e-12 67.8
MsG0580027444.01.T01 MTR_8g085430 37.563 197 105 7 6 189 9 200 5.59e-25 104
MsG0580027444.01.T01 MTR_3g071790 35.754 179 101 6 173 339 26 202 8.52e-25 100
MsG0580027444.01.T01 MTR_7g056430 27.970 404 209 16 2 372 3 357 2.16e-24 105
MsG0580027444.01.T01 MTR_7g056420 27.970 404 209 16 2 372 3 357 2.16e-24 105
MsG0580027444.01.T01 MTR_7g007370 30.769 351 178 10 7 343 16 315 3.58e-24 102
MsG0580027444.01.T01 MTR_0571s0010 59.524 84 31 1 8 91 32 112 6.63e-23 92.8
MsG0580027444.01.T01 MTR_7g034110 29.191 346 177 10 6 336 9 301 2.79e-22 97.1
MsG0580027444.01.T01 MTR_7g022105 29.722 360 232 11 6 351 47 399 2.28e-21 95.5
MsG0580027444.01.T01 MTR_7g021990 30.028 363 227 12 6 351 46 398 5.67e-21 94.4
MsG0580027444.01.T01 MTR_6g022410 52.128 94 39 4 290 380 17 107 6.62e-21 87.4
MsG0580027444.01.T01 MTR_7g021950 30.028 363 227 12 6 351 46 398 8.55e-21 94.4
MsG0580027444.01.T01 MTR_2g007550 28.571 392 199 15 2 378 8 333 9.74e-21 92.8
MsG0580027444.01.T01 MTR_6g033095 36.364 198 67 5 155 350 49 189 1.27e-20 89.4
MsG0580027444.01.T01 MTR_8g077460 27.792 403 224 16 8 380 10 375 3.39e-20 91.7
MsG0580027444.01.T01 MTR_4g080610 28.000 375 210 9 10 367 14 345 7.06e-20 90.5
MsG0580027444.01.T01 MTR_7g033945 35.057 174 96 6 2 164 5 172 8.36e-20 86.7
MsG0580027444.01.T01 MTR_3g114200 38.356 146 81 3 8 149 19 159 1.03e-19 85.5
MsG0580027444.01.T01 MTR_4g134150 33.663 202 114 8 8 203 14 201 1.80e-19 87.0
MsG0580027444.01.T01 MTR_7g075800 26.290 407 209 18 8 344 9 394 3.23e-18 87.0
MsG0580027444.01.T01 MTR_8g468760 28.302 424 246 18 2 377 3 416 4.20e-18 85.9
MsG0580027444.01.T01 MTR_4g093690 32.381 210 109 8 8 198 18 213 3.20e-17 81.3
MsG0580027444.01.T01 MTR_8g014260 26.638 458 245 18 2 382 10 453 1.74e-16 81.3
MsG0580027444.01.T01 MTR_5g080710 26.697 442 245 16 2 379 27 453 1.74e-16 81.3
MsG0580027444.01.T01 MTR_8g062270 32.000 200 117 6 6 188 14 211 1.94e-15 77.8
MsG0580027444.01.T01 MTR_5g013500 25.381 394 236 15 8 380 9 365 2.09e-15 77.4
MsG0580027444.01.T01 MTR_8g445780 33.495 206 110 7 2 191 7 201 2.14e-15 77.4
MsG0580027444.01.T01 MTR_8g014160 25.432 405 250 16 8 380 41 425 2.30e-15 77.4
MsG0580027444.01.T01 MTR_8g467800 32.105 190 115 6 8 188 20 204 5.73e-15 75.9
MsG0580027444.01.T01 MTR_1g021825 32.632 190 116 6 5 187 14 198 8.15e-15 75.9
MsG0580027444.01.T01 MTR_1g021825 32.632 190 116 6 5 187 85 269 8.22e-15 76.3
MsG0580027444.01.T01 MTR_8g467800 32.105 190 115 6 8 188 20 204 1.83e-14 75.1
MsG0580027444.01.T01 MTR_2g047858 32.461 191 115 7 8 188 115 301 2.15e-14 75.1
MsG0580027444.01.T01 MTR_1g013580 32.990 194 120 6 3 187 14 206 2.50e-14 74.3
MsG0580027444.01.T01 MTR_5g024060 39.062 128 68 5 249 372 79 200 2.57e-14 72.8
MsG0580027444.01.T01 MTR_4g032730 31.034 203 126 6 6 194 13 215 4.07e-14 73.9
MsG0580027444.01.T01 MTR_2g007090 32.203 236 120 10 152 377 86 291 5.77e-14 72.4
MsG0580027444.01.T01 MTR_4g056020 32.642 193 109 8 8 187 9 193 6.45e-14 73.2
MsG0580027444.01.T01 MTR_5g084070 25.754 431 244 15 7 378 12 425 7.30e-14 73.2
MsG0580027444.01.T01 MTR_5g073400 39.450 109 64 1 83 189 4 112 1.31e-13 67.8
MsG0580027444.01.T01 MTR_8g468810 31.122 196 122 6 8 191 25 219 1.85e-13 71.2
MsG0580027444.01.T01 MTR_8g468810 31.122 196 122 6 8 191 25 219 1.87e-13 71.2
MsG0580027444.01.T01 MTR_8g468810 31.122 196 122 6 8 191 25 219 1.89e-13 70.9
MsG0580027444.01.T01 MTR_8g468810 31.122 196 122 6 8 191 25 219 2.55e-13 71.6
MsG0580027444.01.T01 MTR_8g468810 31.122 196 122 6 8 191 25 219 2.67e-13 70.9
MsG0580027444.01.T01 MTR_2g020180 35.714 140 67 7 249 380 91 215 3.60e-13 68.6
MsG0580027444.01.T01 MTR_4g056040 30.000 250 124 11 8 215 9 249 3.62e-13 71.2
MsG0580027444.01.T01 MTR_8g062010 29.167 192 125 7 2 185 3 191 3.68e-13 70.9
MsG0580027444.01.T01 MTR_8g014290 35.526 152 77 6 8 140 10 159 9.09e-13 66.2
MsG0580027444.01.T01 MTR_7g033940 37.719 114 60 4 7 117 93 198 1.39e-12 67.0
MsG0580027444.01.T01 MTR_8g070950 32.143 196 116 9 2 187 9 197 2.29e-12 68.6
MsG0580027444.01.T01 MTR_2g100590 29.744 195 124 5 6 188 40 233 3.17e-12 68.2
MsG0580027444.01.T01 MTR_2g100590 29.231 195 125 5 6 188 40 233 3.49e-12 67.8
MsG0580027444.01.T01 MTR_2g100590 29.231 195 125 5 6 188 40 233 3.69e-12 67.8
MsG0580027444.01.T01 MTR_6g061720 53.846 65 29 1 13 77 13 76 5.62e-12 61.6
MsG0580027444.01.T01 MTR_1g038710 29.167 192 121 4 8 187 19 207 6.52e-12 67.0
MsG0580027444.01.T01 MTR_4g057725 31.818 198 117 6 3 187 17 209 8.00e-12 66.6
MsG0580027444.01.T01 MTR_2g083840 23.725 451 256 19 6 380 19 457 8.78e-12 66.6
MsG0580027444.01.T01 MTR_1g016340 31.156 199 118 7 5 188 12 206 1.30e-11 66.2
MsG0580027444.01.T01 MTR_1g013560 31.313 198 118 7 3 187 14 206 1.45e-11 65.5
MsG0580027444.01.T01 MTR_1g016340 31.156 199 118 7 5 188 17 211 1.51e-11 65.9
MsG0580027444.01.T01 MTR_1g090900 34.118 170 94 8 8 168 11 171 1.94e-11 63.2
MsG0580027444.01.T01 MTR_1g013560 31.313 198 118 7 3 187 14 206 1.97e-11 65.5
MsG0580027444.01.T01 MTR_4g056030 30.612 196 109 9 8 187 9 193 2.02e-11 65.5
MsG0580027444.01.T01 MTR_6g029350 33.803 213 110 11 177 377 2 195 2.34e-11 63.5
MsG0580027444.01.T01 MTR_7g033470 53.247 77 29 4 5 78 11 83 2.78e-11 61.6
MsG0580027444.01.T01 MTR_5g021550 35.616 146 79 5 8 140 19 162 3.23e-11 61.6
MsG0580027444.01.T01 MTR_7g098590 53.448 58 27 0 1 58 11 68 3.87e-11 60.8
MsG0580027444.01.T01 MTR_7g056280 32.973 185 103 8 177 345 367 546 6.93e-11 64.3
MsG0580027444.01.T01 MTR_7g056280 32.240 183 106 6 10 181 8 183 8.35e-11 63.9
MsG0580027444.01.T01 MTR_8g062310 30.481 187 114 8 7 187 24 200 9.26e-11 63.5
MsG0580027444.01.T01 MTR_4g055990 31.390 223 109 10 8 187 9 230 9.78e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027444.01.T01 AT5G56420 26.402 428 249 14 8 380 6 422 1.95e-23 101
MsG0580027444.01.T01 AT5G56420 26.402 428 249 14 8 380 6 422 1.95e-23 101
MsG0580027444.01.T01 AT5G56420 26.402 428 249 14 8 380 6 422 1.95e-23 101
MsG0580027444.01.T01 AT3G42770 28.474 439 220 19 13 377 4 422 1.03e-22 100
MsG0580027444.01.T01 AT2G42730 24.670 454 258 16 8 382 5 453 7.95e-21 94.0
MsG0580027444.01.T01 AT5G41840 34.653 202 111 5 5 187 11 210 8.74e-21 94.4
MsG0580027444.01.T01 AT3G58880 35.135 222 125 6 7 212 2 220 1.50e-20 93.2
MsG0580027444.01.T01 AT5G56690 37.097 186 107 4 10 187 4 187 3.44e-20 91.7
MsG0580027444.01.T01 AT4G00160 28.406 433 244 15 8 380 16 442 3.56e-20 92.0
MsG0580027444.01.T01 AT3G59200 38.342 193 106 7 5 187 4 193 4.42e-20 90.9
MsG0580027444.01.T01 AT1G66290 32.787 183 110 3 7 185 28 201 5.68e-20 91.7
MsG0580027444.01.T01 AT3G59190 37.000 200 104 8 4 187 8 201 7.56e-20 90.5
MsG0580027444.01.T01 AT4G10400 36.702 188 106 7 7 187 1 182 9.52e-20 90.5
MsG0580027444.01.T01 AT4G10400 36.702 188 106 7 7 187 1 182 9.52e-20 90.5
MsG0580027444.01.T01 AT4G10400 36.702 188 106 7 7 187 1 182 9.52e-20 90.5
MsG0580027444.01.T01 AT4G09920 36.170 188 107 7 7 187 1 182 1.35e-19 88.6
MsG0580027444.01.T01 AT4G09920 36.170 188 107 7 7 187 1 182 1.35e-19 88.6
MsG0580027444.01.T01 AT4G09920 36.170 188 107 7 7 187 1 182 1.35e-19 88.6
MsG0580027444.01.T01 AT3G59190 37.000 200 104 8 4 187 8 201 1.51e-19 90.5
MsG0580027444.01.T01 AT3G59200 38.342 193 106 7 5 187 4 193 1.74e-19 90.5
MsG0580027444.01.T01 AT1G78750 25.322 466 238 18 2 378 12 456 2.21e-19 89.7
MsG0580027444.01.T01 AT1G78750 25.322 466 238 18 2 378 12 456 2.21e-19 89.7
MsG0580027444.01.T01 AT3G58860 26.932 427 220 17 4 352 3 415 3.07e-19 89.4
MsG0580027444.01.T01 AT5G56370 26.802 444 230 19 7 379 1 420 3.16e-19 89.0
MsG0580027444.01.T01 AT5G56370 26.802 444 230 19 7 379 1 420 3.16e-19 89.0
MsG0580027444.01.T01 AT4G09920 35.294 187 110 5 7 187 1 182 4.00e-19 87.8
MsG0580027444.01.T01 AT4G09920 35.294 187 110 5 7 187 1 182 4.00e-19 87.8
MsG0580027444.01.T01 AT4G27050 25.764 458 245 20 8 379 4 452 5.03e-19 89.0
MsG0580027444.01.T01 AT4G27050 25.764 458 245 20 8 379 4 452 5.03e-19 89.0
MsG0580027444.01.T01 AT4G27050 25.764 458 245 20 8 379 4 452 5.03e-19 89.0
MsG0580027444.01.T01 AT4G27050 25.764 458 245 20 8 379 4 452 5.03e-19 89.0
MsG0580027444.01.T01 AT4G27050 25.764 458 245 20 8 379 4 452 5.03e-19 89.0
MsG0580027444.01.T01 AT4G14103 29.692 357 174 15 1 285 1 352 5.88e-19 88.6
MsG0580027444.01.T01 AT4G14103 29.692 357 174 15 1 285 1 352 6.55e-19 87.8
MsG0580027444.01.T01 AT4G14103 29.692 357 174 15 1 285 1 352 6.55e-19 87.8
MsG0580027444.01.T01 AT4G15060 36.316 190 107 5 7 187 25 209 8.96e-19 87.8
MsG0580027444.01.T01 AT4G15060 36.316 190 107 5 7 187 171 355 1.25e-18 87.8
MsG0580027444.01.T01 AT1G69630 25.000 456 245 16 2 378 12 449 2.68e-18 86.7
MsG0580027444.01.T01 AT5G41830 35.000 200 106 6 8 187 13 208 5.10e-18 85.9
MsG0580027444.01.T01 AT1G48400 32.843 204 125 5 1 195 3 203 5.89e-18 85.9
MsG0580027444.01.T01 AT1G48400 32.843 204 125 5 1 195 3 203 5.89e-18 85.9
MsG0580027444.01.T01 AT5G27750 31.217 189 121 3 8 187 5 193 8.79e-18 84.3
MsG0580027444.01.T01 AT5G27750 31.217 189 121 3 8 187 5 193 1.12e-17 84.7
MsG0580027444.01.T01 AT5G38590 32.973 185 115 3 7 187 1 180 1.25e-17 82.8
MsG0580027444.01.T01 AT1G06630 37.000 200 105 7 4 187 8 202 1.53e-17 82.8
MsG0580027444.01.T01 AT5G44960 25.647 425 249 14 8 379 5 415 1.64e-17 84.0
MsG0580027444.01.T01 AT5G56820 28.271 428 243 18 8 383 15 430 1.74e-17 84.0
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 8 349 2.38e-17 83.2
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 8 349 2.38e-17 83.2
MsG0580027444.01.T01 AT3G60040 33.333 210 117 7 6 194 11 218 2.40e-17 84.3
MsG0580027444.01.T01 AT5G38590 32.973 185 115 3 7 187 1 180 3.03e-17 83.2
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 17 358 3.07e-17 83.2
MsG0580027444.01.T01 AT3G60040 33.333 210 117 7 6 194 231 438 3.07e-17 84.0
MsG0580027444.01.T01 AT3G60040 33.333 210 117 7 6 194 230 437 3.19e-17 84.0
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 8 349 3.29e-17 83.2
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 8 349 3.29e-17 83.2
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 8 349 3.29e-17 83.2
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 8 349 3.29e-17 83.2
MsG0580027444.01.T01 AT5G41630 34.171 199 107 7 8 187 12 205 3.57e-17 83.2
MsG0580027444.01.T01 AT1G58310 27.807 374 171 13 6 285 6 374 3.73e-17 83.6
MsG0580027444.01.T01 AT3G60040 33.333 210 117 7 6 194 228 435 3.86e-17 83.6
MsG0580027444.01.T01 AT5G56380 35.233 193 108 5 7 187 1 188 3.92e-17 83.2
MsG0580027444.01.T01 AT5G56380 35.233 193 108 5 7 187 1 188 3.92e-17 83.2
MsG0580027444.01.T01 AT3G60040 33.333 210 117 7 6 194 230 437 4.16e-17 83.6
MsG0580027444.01.T01 AT3G59000 37.079 178 92 6 7 168 1 174 4.65e-17 83.2
MsG0580027444.01.T01 AT5G56370 36.702 188 100 7 7 185 1 178 4.72e-17 81.6
MsG0580027444.01.T01 AT1G06630 30.226 354 163 16 4 285 8 349 5.61e-17 82.8
MsG0580027444.01.T01 AT4G00320 33.498 203 111 6 5 187 10 208 7.30e-17 82.4
MsG0580027444.01.T01 AT3G58940 28.198 344 173 12 7 285 1 335 8.85e-17 82.4
MsG0580027444.01.T01 AT3G58940 28.198 344 173 12 7 285 1 335 8.85e-17 82.4
MsG0580027444.01.T01 AT5G44940 27.062 388 249 13 8 378 5 375 1.97e-16 80.5
MsG0580027444.01.T01 AT5G53840 23.288 438 252 15 8 378 18 438 3.08e-16 80.5
MsG0580027444.01.T01 AT4G14096 28.693 352 177 16 1 285 1 345 4.27e-16 80.1
MsG0580027444.01.T01 AT4G14096 28.693 352 177 16 1 285 1 345 4.27e-16 80.1
MsG0580027444.01.T01 AT3G52680 25.968 439 245 16 8 380 21 445 5.46e-16 79.7
MsG0580027444.01.T01 AT1G51370 25.057 435 242 18 8 378 19 433 5.59e-16 79.7
MsG0580027444.01.T01 AT4G22280 25.874 429 241 16 7 377 1 410 6.11e-16 79.3
MsG0580027444.01.T01 AT3G44810 27.171 449 236 17 4 372 3 440 6.67e-16 79.3
MsG0580027444.01.T01 AT3G03040 27.937 315 183 10 7 287 1 305 7.67e-16 79.3
MsG0580027444.01.T01 AT4G22280 34.225 187 110 6 7 187 1 180 9.56e-16 78.2
MsG0580027444.01.T01 AT4G13960 35.567 194 104 7 7 187 1 186 1.05e-15 79.0
MsG0580027444.01.T01 AT4G13960 35.567 194 104 7 7 187 1 186 1.05e-15 79.0
MsG0580027444.01.T01 AT5G38386 26.579 380 221 13 7 345 1 363 1.18e-15 78.2
MsG0580027444.01.T01 AT5G38386 26.579 380 221 13 7 345 1 363 1.18e-15 78.2
MsG0580027444.01.T01 AT4G26350 24.554 448 248 16 7 382 1 430 1.30e-15 78.6
MsG0580027444.01.T01 AT3G49150 34.211 190 111 7 8 187 16 201 1.38e-15 78.6
MsG0580027444.01.T01 AT5G53640 30.978 184 114 4 8 187 22 196 1.78e-15 75.5
MsG0580027444.01.T01 AT4G00315 35.417 192 107 8 7 187 1 186 1.83e-15 78.2
MsG0580027444.01.T01 AT5G60610 33.679 193 100 6 7 187 1 177 1.88e-15 77.8
MsG0580027444.01.T01 AT5G60610 33.679 193 100 6 7 187 1 177 1.88e-15 77.8
MsG0580027444.01.T01 AT5G53635 34.239 184 111 6 10 188 2 180 1.89e-15 77.8
MsG0580027444.01.T01 AT3G59150 34.359 195 119 7 3 188 8 202 2.03e-15 78.2
MsG0580027444.01.T01 AT1G55660 33.871 186 118 4 7 187 52 237 2.59e-15 77.0
MsG0580027444.01.T01 AT1G16930 30.208 192 121 3 2 187 9 193 2.66e-15 77.4
MsG0580027444.01.T01 AT1G16930 30.208 192 121 3 2 187 9 193 2.66e-15 77.4
MsG0580027444.01.T01 AT1G16930 30.208 192 121 3 2 187 9 193 2.66e-15 77.4
MsG0580027444.01.T01 AT1G66310 24.270 445 242 17 7 378 18 440 2.72e-15 77.4
MsG0580027444.01.T01 AT1G52650 33.505 194 109 7 7 187 1 187 2.97e-15 77.4
MsG0580027444.01.T01 AT2G04230 28.218 404 208 19 8 341 13 404 3.85e-15 77.0
MsG0580027444.01.T01 AT3G59170 34.247 219 105 9 4 187 3 217 4.22e-15 77.0
MsG0580027444.01.T01 AT2G29930 33.161 193 106 6 5 187 9 188 5.00e-15 76.6
MsG0580027444.01.T01 AT2G29930 33.161 193 106 6 5 187 9 188 5.00e-15 76.6
MsG0580027444.01.T01 AT1G55660 33.871 186 118 4 7 187 52 237 5.02e-15 77.0
MsG0580027444.01.T01 AT3G59160 33.796 216 108 7 4 187 9 221 5.76e-15 76.6
MsG0580027444.01.T01 AT5G56410 32.524 206 109 7 7 187 1 201 8.61e-15 76.3
MsG0580027444.01.T01 AT5G56810 32.642 193 119 5 1 187 8 195 1.23e-14 74.3
MsG0580027444.01.T01 AT3G59240 25.424 354 191 13 1 285 1 350 1.89e-14 75.1
MsG0580027444.01.T01 AT3G58900 34.375 192 111 6 7 187 1 188 1.97e-14 73.9
MsG0580027444.01.T01 AT3G58900 34.375 192 111 6 7 187 1 188 1.97e-14 73.9
MsG0580027444.01.T01 AT5G38392 33.500 200 108 7 7 187 1 194 2.06e-14 72.4
MsG0580027444.01.T01 AT2G26860 35.025 197 101 7 7 187 1 186 2.07e-14 74.7
MsG0580027444.01.T01 AT2G26860 35.025 197 101 7 7 187 1 186 2.07e-14 74.7
MsG0580027444.01.T01 AT5G56810 32.642 193 119 5 1 187 8 195 2.08e-14 74.7
MsG0580027444.01.T01 AT3G26922 32.796 186 112 4 8 187 14 192 2.15e-14 73.6
MsG0580027444.01.T01 AT3G26922 32.796 186 112 4 8 187 14 192 2.15e-14 73.6
MsG0580027444.01.T01 AT3G58900 34.375 192 111 6 7 187 1 188 2.26e-14 73.6
MsG0580027444.01.T01 AT1G64540 37.234 188 88 10 10 187 7 174 2.64e-14 74.3
MsG0580027444.01.T01 AT1G64540 37.234 188 88 10 10 187 7 174 2.64e-14 74.3
MsG0580027444.01.T01 AT3G44060 35.079 191 113 4 13 195 4 191 3.75e-14 73.9
MsG0580027444.01.T01 AT3G50710 24.537 432 259 14 7 378 1 425 4.46e-14 73.6
MsG0580027444.01.T01 AT1G32375 25.676 444 238 20 7 380 1 422 5.26e-14 73.6
MsG0580027444.01.T01 AT1G32375 25.676 444 238 20 7 380 1 422 5.26e-14 73.6
MsG0580027444.01.T01 AT3G58900 34.375 192 111 6 7 187 1 188 5.32e-14 73.6
MsG0580027444.01.T01 AT4G26340 25.225 444 237 18 7 380 1 419 5.91e-14 73.2
MsG0580027444.01.T01 AT5G35995 36.224 196 98 11 5 187 2 183 1.06e-13 72.8
MsG0580027444.01.T01 AT5G35995 36.224 196 98 11 5 187 2 183 1.06e-13 72.8
MsG0580027444.01.T01 AT5G22670 30.928 194 121 4 2 190 5 190 1.27e-13 72.4
MsG0580027444.01.T01 AT5G22720 32.461 191 114 7 5 187 20 203 1.39e-13 72.4
MsG0580027444.01.T01 AT5G56440 24.009 454 239 17 7 379 1 429 1.45e-13 72.0
MsG0580027444.01.T01 AT3G58820 26.290 407 236 15 7 367 1 389 1.50e-13 72.0
MsG0580027444.01.T01 AT2G42720 27.193 456 230 23 7 377 1 439 1.60e-13 72.0
MsG0580027444.01.T01 AT3G56780 33.155 187 104 7 10 187 9 183 1.80e-13 72.0
MsG0580027444.01.T01 AT3G56780 33.155 187 104 7 10 187 9 183 2.09e-13 72.0
MsG0580027444.01.T01 AT3G56780 33.155 187 104 7 10 187 9 183 2.26e-13 71.2
MsG0580027444.01.T01 AT5G25850 32.620 187 111 6 7 188 19 195 2.41e-13 71.6
MsG0580027444.01.T01 AT3G62430 26.009 446 241 14 7 377 1 432 4.32e-13 70.9
MsG0580027444.01.T01 AT1G51370 30.928 194 114 7 8 193 19 200 5.50e-13 70.1
MsG0580027444.01.T01 AT5G22660 29.348 184 119 3 8 187 13 189 6.87e-13 69.3
MsG0580027444.01.T01 AT1G51370 30.928 194 114 7 8 193 19 200 6.89e-13 70.1
MsG0580027444.01.T01 AT5G44980 26.457 446 238 19 8 379 4 433 7.87e-13 70.1
MsG0580027444.01.T01 AT5G44980 26.457 446 238 19 8 379 4 433 7.87e-13 70.1
MsG0580027444.01.T01 AT5G22660 28.571 189 124 3 3 187 8 189 7.90e-13 70.1
MsG0580027444.01.T01 AT3G52680 34.031 191 107 5 8 188 21 202 9.64e-13 69.3
MsG0580027444.01.T01 AT3G59000 38.333 120 65 3 7 120 1 117 1.12e-12 68.9
MsG0580027444.01.T01 AT5G25860 24.537 432 231 17 3 353 7 424 1.79e-12 68.9
MsG0580027444.01.T01 AT3G03030 29.648 199 117 6 7 188 1 193 1.93e-12 68.2
MsG0580027444.01.T01 AT1G55030 26.065 399 218 16 3 341 14 395 2.99e-12 68.2
MsG0580027444.01.T01 AT2G29910 29.798 198 106 7 5 187 2 181 3.05e-12 67.4
MsG0580027444.01.T01 AT2G29910 29.798 198 106 7 5 187 2 181 3.05e-12 67.4
MsG0580027444.01.T01 AT2G29910 29.798 198 106 7 5 187 26 205 3.22e-12 67.8
MsG0580027444.01.T01 AT2G29910 29.798 198 106 7 5 187 2 181 3.28e-12 67.8
MsG0580027444.01.T01 AT2G29910 29.798 198 106 7 5 187 2 181 3.28e-12 67.8
MsG0580027444.01.T01 AT2G29910 29.798 198 106 7 5 187 2 181 3.28e-12 67.8
MsG0580027444.01.T01 AT2G29910 29.798 198 106 7 5 187 2 181 3.28e-12 67.8
MsG0580027444.01.T01 AT3G03030 29.648 199 117 6 7 188 1 193 3.31e-12 68.2
MsG0580027444.01.T01 AT1G55030 26.065 399 218 16 3 341 4 385 3.54e-12 67.8
MsG0580027444.01.T01 AT5G44980 33.333 192 117 6 8 192 4 191 3.99e-12 67.0
MsG0580027444.01.T01 AT5G44980 33.333 192 117 6 8 192 4 191 3.99e-12 67.0
MsG0580027444.01.T01 AT5G22730 28.191 188 125 3 5 187 25 207 4.92e-12 67.8
MsG0580027444.01.T01 AT5G22730 28.191 188 125 3 5 187 25 207 4.92e-12 67.8
MsG0580027444.01.T01 AT5G22730 28.191 188 125 3 5 187 25 207 5.54e-12 67.0
MsG0580027444.01.T01 AT5G22700 27.174 184 123 3 8 187 6 182 6.40e-12 67.0
MsG0580027444.01.T01 AT5G22700 27.174 184 123 3 8 187 6 182 6.40e-12 67.0
MsG0580027444.01.T01 AT5G22700 27.174 184 123 3 8 187 6 182 6.40e-12 67.0
MsG0580027444.01.T01 AT5G22700 27.174 184 123 3 8 187 6 182 6.40e-12 67.0
MsG0580027444.01.T01 AT5G22700 27.174 184 123 3 8 187 43 219 6.87e-12 67.0
MsG0580027444.01.T01 AT1G66300 26.842 190 129 4 2 187 23 206 6.89e-12 67.0
MsG0580027444.01.T01 AT3G59210 36.410 195 105 8 6 187 5 193 7.04e-12 67.0
MsG0580027444.01.T01 AT3G59210 36.410 195 105 8 6 187 5 193 7.04e-12 67.0
MsG0580027444.01.T01 AT3G59210 36.410 195 105 8 6 187 5 193 7.04e-12 67.0
MsG0580027444.01.T01 AT3G59210 36.410 195 105 8 6 187 5 193 7.04e-12 67.0
MsG0580027444.01.T01 AT3G59210 36.410 195 105 8 6 187 5 193 7.04e-12 67.0
MsG0580027444.01.T01 AT4G13985 31.250 192 119 8 7 187 18 207 8.00e-12 67.0
MsG0580027444.01.T01 AT5G22700 27.174 184 123 3 8 187 43 219 8.26e-12 67.0
MsG0580027444.01.T01 AT5G38390 35.079 191 98 8 7 187 1 175 1.08e-11 66.6
MsG0580027444.01.T01 AT3G58960 32.124 193 112 7 7 188 1 185 1.12e-11 66.6
MsG0580027444.01.T01 AT1G66320 26.923 182 121 4 12 188 34 208 1.85e-11 65.9
MsG0580027444.01.T01 AT2G26030 28.947 190 115 6 8 187 4 183 2.16e-11 65.5
MsG0580027444.01.T01 AT2G26030 28.947 190 115 6 8 187 4 183 2.16e-11 65.5
MsG0580027444.01.T01 AT2G26030 28.947 190 115 6 8 187 4 183 2.41e-11 65.5
MsG0580027444.01.T01 AT5G38396 33.663 202 105 8 7 187 1 194 2.49e-11 65.5
MsG0580027444.01.T01 AT3G58920 30.882 204 108 8 7 187 1 194 2.92e-11 65.1
MsG0580027444.01.T01 AT1G78760 27.807 187 121 4 8 187 16 195 4.18e-11 64.7
MsG0580027444.01.T01 AT3G58980 32.124 193 111 7 7 187 1 185 4.63e-11 64.7
MsG0580027444.01.T01 AT1G21990 29.189 185 122 4 8 187 9 189 4.86e-11 64.7

Find 61 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCAACCTTTCAAAATATT+TGG 0.129722 5:+60987116 MsG0580027444.01.T01:CDS
TTAATATGTATCGGAAATTT+AGG 0.171816 5:-60987443 None:intergenic
GAAAATTATGGGATTCAATT+TGG 0.178239 5:-60987243 None:intergenic
ACATTACAAATCGCATTAAA+TGG 0.251813 5:-60987542 None:intergenic
CCTAGTTGTTCTTAAACTTA+AGG 0.281532 5:+60987277 MsG0580027444.01.T01:CDS
GCAATCAGCTCTGACCAATT+TGG 0.284863 5:-60987504 None:intergenic
ACAGAGTGGTGGCCATCTTT+TGG 0.301429 5:-60986979 None:intergenic
GGTTTGAGAGGTGAAAATTA+TGG 0.308210 5:-60987255 None:intergenic
CTAGTTGTTCTTAAACTTAA+GGG 0.318033 5:+60987278 MsG0580027444.01.T01:CDS
CTACGCAAATCTTGTAGAAT+TGG 0.321877 5:-60987413 None:intergenic
AATGCAAAGACATCAAATTA+TGG 0.340712 5:+60988013 MsG0580027444.01.T01:CDS
TGTCTTTGCATTAATCCATT+TGG 0.342461 5:-60988002 None:intergenic
GTTTGAGAGGTGAAAATTAT+GGG 0.345336 5:-60987254 None:intergenic
GAGCTCCAGCTTATATAATA+AGG 0.351047 5:+60987821 MsG0580027444.01.T01:CDS
ATCGTTGTTCTTGTCCAAAT+TGG 0.352646 5:+60987490 MsG0580027444.01.T01:CDS
GGACGTGGAGAAAGCTTGTT+TGG 0.376158 5:-60986949 None:intergenic
TCAAATTCTTTACATGACTA+AGG 0.392938 5:+60987715 MsG0580027444.01.T01:CDS
TTCTAGAATGCTCTCACCTT+CGG 0.420629 5:+60987865 MsG0580027444.01.T01:CDS
TGGAGAAAGCTTGTTTGGTT+GGG 0.422156 5:-60986944 None:intergenic
ATGTAAAGAATTTGAAGCTT+GGG 0.422475 5:-60987707 None:intergenic
TGTACAATTATAAACTTTGA+AGG 0.425912 5:+60987891 MsG0580027444.01.T01:CDS
GCAAAATATATGTTGCAAAT+CGG 0.438048 5:-60987929 None:intergenic
CCTTAAGTTTAAGAACAACT+AGG 0.441721 5:-60987277 None:intergenic
AACGAACATGTTTCAAAACT+AGG 0.442831 5:-60987349 None:intergenic
TGATTCCTTATTATATAAGC+TGG 0.448170 5:-60987826 None:intergenic
TTCATCGTCGAATTCGAGAA+TGG 0.450026 5:-60987012 None:intergenic
AGCATTCTAGAACTGAAATT+CGG 0.469232 5:-60987854 None:intergenic
GTGGAGAAAGCTTGTTTGGT+TGG 0.469474 5:-60986945 None:intergenic
GGAATGCCTTTGAACGAAGC+CGG 0.473611 5:-60987596 None:intergenic
AGCTTGTTTGGTTGGGAGCA+AGG 0.477261 5:-60986937 None:intergenic
ATTTAATGCGATTTGTAATG+TGG 0.487901 5:+60987544 MsG0580027444.01.T01:CDS
CATGTAAAGAATTTGAAGCT+TGG 0.488154 5:-60987708 None:intergenic
ATTGACCCGGCTTCGTTCAA+AGG 0.491684 5:+60987590 MsG0580027444.01.T01:CDS
CTTAAGTTTAAGAACAACTA+GGG 0.495382 5:-60987276 None:intergenic
AGAAGACAGCCTCCGTCGAC+AGG 0.499874 5:+60986874 MsG0580027444.01.T01:CDS
ACGAACATGTTTCAAAACTA+GGG 0.499968 5:-60987348 None:intergenic
GAATGCCTTTGAACGAAGCC+GGG 0.500010 5:-60987595 None:intergenic
GTTACTGCTAGTTCTCCAAA+TGG 0.510171 5:+60987987 MsG0580027444.01.T01:CDS
ATGATGGAAAGCAACGCATC+AGG 0.511060 5:-60986909 None:intergenic
TTACATCCCGGAGAGATCCT+TGG 0.515641 5:-60988053 None:intergenic
CACTTGGCCAAGGATCTCTC+CGG 0.517164 5:+60988046 MsG0580027444.01.T01:CDS
TCATATAAAACTTTACATCC+CGG 0.520727 5:-60988065 None:intergenic
TGGGAGCAAGGAGAGAATGA+TGG 0.524547 5:-60986925 None:intergenic
CGTCCGTTCTCTCCAAAAGA+TGG 0.528394 5:+60986967 MsG0580027444.01.T01:CDS
CGCTAAAAGACGTCATGTCG+AGG 0.537482 5:+60987196 MsG0580027444.01.T01:CDS
ACATATTAAAATTAATGAAG+AGG 0.552385 5:+60987457 MsG0580027444.01.T01:CDS
TCGCGTCATCGTTGTCATCA+CGG 0.552784 5:-60987040 None:intergenic
ACTTGGCCAAGGATCTCTCC+GGG 0.554761 5:+60988047 MsG0580027444.01.T01:CDS
AAAGGTTGGTTTCTCGCACA+AGG 0.559743 5:-60987104 None:intergenic
GTCATCGTTGTCATCACGGA+TGG 0.562624 5:-60987036 None:intergenic
AAGAACAACTAGGGTTTGAG+AGG 0.566638 5:-60987267 None:intergenic
CGGAGAGATCCTTGGCCAAG+TGG 0.610525 5:-60988045 None:intergenic
ATTCAATTTGGCGTATTGCG+CGG 0.610671 5:-60987231 None:intergenic
CATAACAATCAATATTGACC+CGG 0.618545 5:+60987577 MsG0580027444.01.T01:CDS
TTATAATTGTACACGACCGA+AGG 0.631606 5:-60987881 None:intergenic
AATTCTTTACATGACTAAGG+AGG 0.633060 5:+60987718 MsG0580027444.01.T01:CDS
TAAATTACTGATCCTGTCGA+CGG 0.640798 5:-60986886 None:intergenic
TAGCGTCAGGACGACACTTG+AGG 0.640975 5:-60987139 None:intergenic
GAAAGTGAATAACAGAGTGG+TGG 0.658670 5:-60986990 None:intergenic
ATTACTGATCCTGTCGACGG+AGG 0.685804 5:-60986883 None:intergenic
ATGGAAAGTGAATAACAGAG+TGG 0.697337 5:-60986993 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTAATTTTAATATGTAT+CGG - Chr5:60987455-60987474 None:intergenic 10.0%
!! ACATATTAAAATTAATGAAG+AGG + Chr5:60987457-60987476 MsG0580027444.01.T01:CDS 15.0%
!! TGTACAATTATAAACTTTGA+AGG + Chr5:60987891-60987910 MsG0580027444.01.T01:CDS 20.0%
!! TTAATATGTATCGGAAATTT+AGG - Chr5:60987446-60987465 None:intergenic 20.0%
!!! TGAATCAAGTTTTGAAAAAT+TGG - Chr5:60987620-60987639 None:intergenic 20.0%
! AACCAACCTTTCAAAATATT+TGG + Chr5:60987116-60987135 MsG0580027444.01.T01:CDS 25.0%
! AATGCAAAGACATCAAATTA+TGG + Chr5:60988013-60988032 MsG0580027444.01.T01:CDS 25.0%
! ACATTACAAATCGCATTAAA+TGG - Chr5:60987545-60987564 None:intergenic 25.0%
! ATTTAATGCGATTTGTAATG+TGG + Chr5:60987544-60987563 MsG0580027444.01.T01:CDS 25.0%
! CTAGTTGTTCTTAAACTTAA+GGG + Chr5:60987278-60987297 MsG0580027444.01.T01:CDS 25.0%
! CTTAAGTTTAAGAACAACTA+GGG - Chr5:60987279-60987298 None:intergenic 25.0%
! GAAAATTATGGGATTCAATT+TGG - Chr5:60987246-60987265 None:intergenic 25.0%
! GCAAAATATATGTTGCAAAT+CGG - Chr5:60987932-60987951 None:intergenic 25.0%
! TCAAATTCTTTACATGACTA+AGG + Chr5:60987715-60987734 MsG0580027444.01.T01:CDS 25.0%
! TCATATAAAACTTTACATCC+CGG - Chr5:60988068-60988087 None:intergenic 25.0%
! TGATTCCTTATTATATAAGC+TGG - Chr5:60987829-60987848 None:intergenic 25.0%
! TTATGGAAAAATTATCCACT+TGG + Chr5:60988030-60988049 MsG0580027444.01.T01:CDS 25.0%
!! ATGTAAAGAATTTGAAGCTT+GGG - Chr5:60987710-60987729 None:intergenic 25.0%
!! TATTTTATCCTTTTTGACAG+TGG + Chr5:60987799-60987818 MsG0580027444.01.T01:intron 25.0%
AACGAACATGTTTCAAAACT+AGG - Chr5:60987352-60987371 None:intergenic 30.0%
AATTCTTTACATGACTAAGG+AGG + Chr5:60987718-60987737 MsG0580027444.01.T01:CDS 30.0%
ACGAACATGTTTCAAAACTA+GGG - Chr5:60987351-60987370 None:intergenic 30.0%
CATAACAATCAATATTGACC+CGG + Chr5:60987577-60987596 MsG0580027444.01.T01:CDS 30.0%
CCTAGTTGTTCTTAAACTTA+AGG + Chr5:60987277-60987296 MsG0580027444.01.T01:CDS 30.0%
CCTTAAGTTTAAGAACAACT+AGG - Chr5:60987280-60987299 None:intergenic 30.0%
GTTTGAGAGGTGAAAATTAT+GGG - Chr5:60987257-60987276 None:intergenic 30.0%
TAAAAAAAGCTTGCATGCAT+GGG + Chr5:60987166-60987185 MsG0580027444.01.T01:CDS 30.0%
TGTCTTTGCATTAATCCATT+TGG - Chr5:60988005-60988024 None:intergenic 30.0%
TTAAAAAAAGCTTGCATGCA+TGG + Chr5:60987165-60987184 MsG0580027444.01.T01:CDS 30.0%
! CATGTAAAGAATTTGAAGCT+TGG - Chr5:60987711-60987730 None:intergenic 30.0%
!! AGCATTCTAGAACTGAAATT+CGG - Chr5:60987857-60987876 None:intergenic 30.0%
!! TTGAGGCCAAATATTTTGAA+AGG - Chr5:60987125-60987144 None:intergenic 30.0%
!!! CACATTCAACTAACGTTTTT+TGG + Chr5:60987638-60987657 MsG0580027444.01.T01:CDS 30.0%
!!! CTTTTTTTAAGATTAGCGTC+AGG - Chr5:60987155-60987174 None:intergenic 30.0%
AAAAATTATCCACTTGGCCA+AGG + Chr5:60988036-60988055 MsG0580027444.01.T01:CDS 35.0%
ATCGTTGTTCTTGTCCAAAT+TGG + Chr5:60987490-60987509 MsG0580027444.01.T01:CDS 35.0%
ATGGAAAGTGAATAACAGAG+TGG - Chr5:60986996-60987015 None:intergenic 35.0%
CTACGCAAATCTTGTAGAAT+TGG - Chr5:60987416-60987435 None:intergenic 35.0%
GAGCTCCAGCTTATATAATA+AGG + Chr5:60987821-60987840 MsG0580027444.01.T01:CDS 35.0%
GGTTTGAGAGGTGAAAATTA+TGG - Chr5:60987258-60987277 None:intergenic 35.0%
TAAATTACTGATCCTGTCGA+CGG - Chr5:60986889-60986908 None:intergenic 35.0%
TTATAATTGTACACGACCGA+AGG - Chr5:60987884-60987903 None:intergenic 35.0%
!! GGCCAAATATTTTGAAAGGT+TGG - Chr5:60987121-60987140 None:intergenic 35.0%
!!! AAAACTAGGGTTTTGAGAGA+TGG - Chr5:60987338-60987357 None:intergenic 35.0%
!!! ACGTTTTTTGGCTTGTTAAG+AGG + Chr5:60987650-60987669 MsG0580027444.01.T01:CDS 35.0%
!!! TTTTTGGCTTGTTAAGAGGT+TGG + Chr5:60987654-60987673 MsG0580027444.01.T01:CDS 35.0%
AAGAACAACTAGGGTTTGAG+AGG - Chr5:60987270-60987289 None:intergenic 40.0%
ATTCAATTTGGCGTATTGCG+CGG - Chr5:60987234-60987253 None:intergenic 40.0%
GAAAGTGAATAACAGAGTGG+TGG - Chr5:60986993-60987012 None:intergenic 40.0%
TTCATCGTCGAATTCGAGAA+TGG - Chr5:60987015-60987034 None:intergenic 40.0%
! GTTACTGCTAGTTCTCCAAA+TGG + Chr5:60987987-60988006 MsG0580027444.01.T01:CDS 40.0%
! TGGAGAAAGCTTGTTTGGTT+GGG - Chr5:60986947-60986966 None:intergenic 40.0%
!! TTCTAGAATGCTCTCACCTT+CGG + Chr5:60987865-60987884 MsG0580027444.01.T01:CDS 40.0%
! ATGATGGAAAGCAACGCATC+AGG - Chr5:60986912-60986931 None:intergenic 45.0%
! CTCGACATGACGTCTTTTAG+CGG - Chr5:60987198-60987217 None:intergenic 45.0%
! GCAATCAGCTCTGACCAATT+TGG - Chr5:60987507-60987526 None:intergenic 45.0%
! GTGGAGAAAGCTTGTTTGGT+TGG - Chr5:60986948-60986967 None:intergenic 45.0%
!! AAAGGTTGGTTTCTCGCACA+AGG - Chr5:60987107-60987126 None:intergenic 45.0%
!! TGGCCATCTTTTGGAGAGAA+CGG - Chr5:60986973-60986992 None:intergenic 45.0%
ATTACTGATCCTGTCGACGG+AGG - Chr5:60986886-60986905 None:intergenic 50.0%
ATTGACCCGGCTTCGTTCAA+AGG + Chr5:60987590-60987609 MsG0580027444.01.T01:CDS 50.0%
CGCTAAAAGACGTCATGTCG+AGG + Chr5:60987196-60987215 MsG0580027444.01.T01:CDS 50.0%
CGTCCGTTCTCTCCAAAAGA+TGG + Chr5:60986967-60986986 MsG0580027444.01.T01:CDS 50.0%
CTGGAGCTCCACTGTCAAAA+AGG - Chr5:60987810-60987829 None:intergenic 50.0%
GAATGCCTTTGAACGAAGCC+GGG - Chr5:60987598-60987617 None:intergenic 50.0%
GGAATGCCTTTGAACGAAGC+CGG - Chr5:60987599-60987618 None:intergenic 50.0%
GTCATCGTTGTCATCACGGA+TGG - Chr5:60987039-60987058 None:intergenic 50.0%
TCGCGTCATCGTTGTCATCA+CGG - Chr5:60987043-60987062 None:intergenic 50.0%
TGGGAGCAAGGAGAGAATGA+TGG - Chr5:60986928-60986947 None:intergenic 50.0%
TTACATCCCGGAGAGATCCT+TGG - Chr5:60988056-60988075 None:intergenic 50.0%
! ACAGAGTGGTGGCCATCTTT+TGG - Chr5:60986982-60987001 None:intergenic 50.0%
! AGCTTGTTTGGTTGGGAGCA+AGG - Chr5:60986940-60986959 None:intergenic 50.0%
! GGACGTGGAGAAAGCTTGTT+TGG - Chr5:60986952-60986971 None:intergenic 50.0%
!! TCTTTTGGAGAGAACGGACG+TGG - Chr5:60986967-60986986 None:intergenic 50.0%
ACTTGGCCAAGGATCTCTCC+GGG + Chr5:60988047-60988066 MsG0580027444.01.T01:CDS 55.0%
CACTTGGCCAAGGATCTCTC+CGG + Chr5:60988046-60988065 MsG0580027444.01.T01:CDS 55.0%
TAGCGTCAGGACGACACTTG+AGG - Chr5:60987142-60987161 None:intergenic 55.0%
AGAAGACAGCCTCCGTCGAC+AGG + Chr5:60986874-60986893 MsG0580027444.01.T01:CDS 60.0%
CGGAGAGATCCTTGGCCAAG+TGG - Chr5:60988048-60988067 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 60986870 60988100 60986870 ID=MsG0580027444.01;Name=MsG0580027444.01
Chr5 mRNA 60986870 60988100 60986870 ID=MsG0580027444.01.T01;Parent=MsG0580027444.01;Name=MsG0580027444.01.T01;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|383
Chr5 exon 60986870 60987739 60986870 ID=MsG0580027444.01.T01:exon:43054;Parent=MsG0580027444.01.T01
Chr5 exon 60987819 60988100 60987819 ID=MsG0580027444.01.T01:exon:43055;Parent=MsG0580027444.01.T01
Chr5 CDS 60986870 60987739 60986870 ID=MsG0580027444.01.T01:cds;Parent=MsG0580027444.01.T01
Chr5 CDS 60987819 60988100 60987819 ID=MsG0580027444.01.T01:cds;Parent=MsG0580027444.01.T01
Gene Sequence

>MsG0580027444.01.T01

ATGAAGAAGACAGCCTCCGTCGACAGGATCAGTAATTTACCTGATGCGTTGCTTTCCATCATTCTCTCCTTGCTCCCAACCAAACAAGCTTTCTCCACGTCCGTTCTCTCCAAAAGATGGCCACCACTCTGTTATTCACTTTCCATTCTCGAATTCGACGATGAAACCATCCGTGATGACAACGATGACGCGATCAATAGCTTCTGTCGTTTTGTTGACACAATTATGCTCTCTCCTTGTGCGAGAAACCAACCTTTCAAAATATTTGGCCTCAAGTGTCGTCCTGACGCTAATCTTAAAAAAAGCTTGCATGCATGGGTAGAAGCCGCTAAAAGACGTCATGTCGAGGAATTTAATCTCACCGCGCAATACGCCAAATTGAATCCCATAATTTTCACCTCTCAAACCCTAGTTGTTCTTAAACTTAAGGGCTTACTTGTTAAAACTCATTTCTATGCTGATCTTCCATCTCTCAAAACCCTAGTTTTGAAACATGTTCGTTTTGTAAATCAGAATGATTTCATTAAGCTTCTTAATGCATGTCCAATTCTACAAGATTTGCGTAGTTCTTATCCTAAATTTCCGATACATATTAAAATTAATGAAGAGGATGAGTTTAAATCGTTGTTCTTGTCCAAATTGGTCAGAGCTGATTGCAGTTTAGACGATGTTCCATTTAATGCGATTTGTAATGTGGAGTTTCTACGCATAACAATCAATATTGACCCGGCTTCGTTCAAAGGCATTCCAATTTTTCAAAACTTGATTCACATTCAACTAACGTTTTTTGGCTTGTTAAGAGGTTGGTTTCATGTAGTAGAATTGCTACAGCATTGTCCCAAGCTTCAAATTCTTTACATGACTAAGGAGTGGAGCTCCAGCTTATATAATAAGGAATCAGAATGCCGAATTTCAGTTCTAGAATGCTCTCACCTTCGGTCGTGTACAATTATAAACTTTGAAGGCTCTAGAAACGATCTCCGATTTGCAACATATATTTTGCAGAATGCAAGTCTTTTAGAAGTGATGAGAATCGATGTTACTGCTAGTTCTCCAAATGGATTAATGCAAAGACATCAAATTATGGAAAAATTATCCACTTGGCCAAGGATCTCTCCGGGATGTAAAGTTTTATATGAAATTATTGAGTAA
Protein sequence

>MsG0580027444.01.T01

MKKTASVDRISNLPDALLSIILSLLPTKQAFSTSVLSKRWPPLCYSLSILEFDDETIRDDNDDAINSFCRFVDTIMLSPCARNQPFKIFGLKCRPDANLKKSLHAWVEAAKRRHVEEFNLTAQYAKLNPIIFTSQTLVVLKLKGLLVKTHFYADLPSLKTLVLKHVRFVNQNDFIKLLNACPILQDLRSSYPKFPIHIKINEEDEFKSLFLSKLVRADCSLDDVPFNAICNVEFLRITINIDPASFKGIPIFQNLIHIQLTFFGLLRGWFHVVELLQHCPKLQILYMTKEWSSSLYNKESECRISVLECSHLRSCTIINFEGSRNDLRFATYILQNASLLEVMRIDVTASSPNGLMQRHQIMEKLSTWPRISPGCKVLYEIIE*