AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028083.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028083.01.T01 MTR_5g073420 43.377 385 139 8 8 321 1 377 1.67e-88 270
MsG0580028083.01.T01 MTR_1089s0010 46.032 378 131 8 13 321 3 376 4.52e-87 266
MsG0580028083.01.T01 MTR_5g058000 43.902 369 140 7 17 321 7 372 4.82e-80 248
MsG0580028083.01.T01 MTR_3g095600 49.211 317 116 10 17 315 3 292 1.07e-77 239
MsG0580028083.01.T01 MTR_1g066830 42.078 385 145 9 13 321 2 384 4.85e-72 228
MsG0580028083.01.T01 MTR_5g061680 45.608 296 118 5 8 262 1 294 1.97e-67 214
MsG0580028083.01.T01 MTR_6g040270 52.174 230 106 3 16 243 6 233 2.11e-67 216
MsG0580028083.01.T01 MTR_6g040270 54.023 87 34 1 241 321 292 378 9.41e-19 86.7
MsG0580028083.01.T01 MTR_5g058100 50.870 230 107 4 17 243 8 234 3.90e-64 207
MsG0580028083.01.T01 MTR_5g058100 54.023 87 36 1 239 321 295 381 4.41e-20 90.5
MsG0580028083.01.T01 MTR_6g022500 35.325 385 172 7 13 324 96 476 3.97e-59 197
MsG0580028083.01.T01 MTR_7g026500 34.937 395 174 9 6 321 2 392 5.29e-59 195
MsG0580028083.01.T01 MTR_5g045510 36.911 382 161 11 12 326 6 374 9.36e-57 188
MsG0580028083.01.T01 MTR_6g044572 38.520 392 159 10 17 327 1 391 3.77e-56 187
MsG0580028083.01.T01 MTR_1g085120 46.983 232 115 4 18 243 179 408 9.93e-56 188
MsG0580028083.01.T01 MTR_1g085120 46.983 232 115 4 18 243 92 321 1.12e-55 188
MsG0580028083.01.T01 MTR_1g085120 59.524 84 31 1 241 321 385 468 3.56e-22 97.1
MsG0580028083.01.T01 MTR_1g085120 46.983 232 115 4 18 243 167 396 4.40e-55 188
MsG0580028083.01.T01 MTR_1g085120 59.524 84 31 1 241 321 460 543 3.77e-22 97.4
MsG0580028083.01.T01 MTR_6g044560 38.520 392 159 10 17 327 177 567 2.34e-54 187
MsG0580028083.01.T01 MTR_0009s0080 35.294 357 148 10 16 294 16 367 1.66e-48 168
MsG0580028083.01.T01 MTR_4g039440 45.726 234 113 6 17 243 33 259 2.37e-48 167
MsG0580028083.01.T01 MTR_4g039440 52.874 87 35 1 241 321 323 409 1.34e-18 86.3
MsG0580028083.01.T01 MTR_6g011460 44.872 234 114 4 17 243 45 270 7.14e-48 166
MsG0580028083.01.T01 MTR_7g055943 45.249 221 117 3 13 230 35 254 1.12e-47 166
MsG0580028083.01.T01 MTR_7g055943 39.286 140 74 3 191 321 281 418 4.20e-18 85.1
MsG0580028083.01.T01 MTR_5g039490 34.817 382 181 11 4 326 6 378 6.41e-46 160
MsG0580028083.01.T01 MTR_1g108820 42.149 242 117 6 15 243 5 236 9.15e-44 154
MsG0580028083.01.T01 MTR_1g108820 42.149 242 117 6 15 243 5 236 1.26e-43 154
MsG0580028083.01.T01 MTR_1g108820 50.000 82 36 2 246 323 305 385 1.50e-14 74.3
MsG0580028083.01.T01 MTR_6g022360 40.851 235 120 4 13 243 38 257 1.29e-41 149
MsG0580028083.01.T01 MTR_3g095640 48.295 176 83 5 1 169 1 175 2.56e-39 137
MsG0580028083.01.T01 MTR_7g056287 31.635 373 182 10 18 322 3 370 6.41e-39 141
MsG0580028083.01.T01 MTR_7g056277 31.635 373 182 9 18 322 259 626 1.26e-38 145
MsG0580028083.01.T01 MTR_7g032380 29.396 364 202 9 8 324 1 356 1.18e-37 137
MsG0580028083.01.T01 MTR_3g467400 29.919 371 190 11 18 324 3 367 5.19e-36 134
MsG0580028083.01.T01 MTR_5g031970 30.387 362 182 10 12 321 10 353 2.64e-35 131
MsG0580028083.01.T01 MTR_5g058350 40.642 187 83 1 17 203 7 165 2.84e-33 121
MsG0580028083.01.T01 MTR_7g007080 32.564 390 164 18 18 323 4 378 5.02e-33 126
MsG0580028083.01.T01 MTR_5g045170 31.937 382 171 13 20 321 16 388 5.70e-33 126
MsG0580028083.01.T01 MTR_5g039450 31.948 385 150 12 16 321 4 355 1.95e-32 124
MsG0580028083.01.T01 MTR_1g041245 33.117 308 169 13 8 295 1 291 1.63e-31 122
MsG0580028083.01.T01 MTR_6g022390 47.059 136 65 2 17 146 4 138 4.67e-31 114
MsG0580028083.01.T01 MTR_5g073370 38.075 239 124 9 18 243 5 232 1.87e-30 119
MsG0580028083.01.T01 MTR_7g088260 29.211 380 182 12 18 321 91 459 3.11e-30 119
MsG0580028083.01.T01 MTR_7g034115 30.127 395 170 16 8 316 1 375 8.05e-30 117
MsG0580028083.01.T01 MTR_3g107100 28.398 412 186 15 8 324 1 398 1.00e-29 117
MsG0580028083.01.T01 MTR_8g085430 30.519 308 181 9 8 294 1 296 1.29e-29 115
MsG0580028083.01.T01 MTR_5g007410 36.123 227 140 4 20 243 28 252 2.51e-29 117
MsG0580028083.01.T01 MTR_5g007410 36.842 152 81 6 177 321 262 405 6.44e-16 78.6
MsG0580028083.01.T01 MTR_7g032370 30.411 365 170 13 30 324 2 352 2.52e-29 115
MsG0580028083.01.T01 MTR_6g045333 35.270 241 146 7 9 243 52 288 9.87e-29 115
MsG0580028083.01.T01 MTR_6g045333 37.313 134 80 3 192 321 310 443 1.22e-14 74.7
MsG0580028083.01.T01 MTR_7g056447 36.404 228 132 6 11 232 2 222 1.96e-28 112
MsG0580028083.01.T01 MTR_3g071850 34.802 227 138 7 10 230 16 238 2.32e-28 115
MsG0580028083.01.T01 MTR_3g071850 41.860 86 47 1 245 327 327 412 4.63e-13 70.5
MsG0580028083.01.T01 MTR_1g108800 35.983 239 102 6 15 243 5 202 4.40e-28 112
MsG0580028083.01.T01 MTR_1g108800 48.810 84 35 3 246 324 262 342 1.90e-13 70.5
MsG0580028083.01.T01 MTR_5g065100 30.919 359 181 10 12 319 2 344 8.40e-28 112
MsG0580028083.01.T01 MTR_3g036250 28.919 370 190 12 16 321 3 363 1.14e-27 111
MsG0580028083.01.T01 MTR_7g033915 27.273 374 200 11 8 321 1 362 2.49e-27 110
MsG0580028083.01.T01 MTR_5g073340 36.992 246 107 11 8 243 1 208 4.49e-27 108
MsG0580028083.01.T01 MTR_5g076150 50.376 133 59 4 128 255 11 141 5.55e-27 106
MsG0580028083.01.T01 MTR_7g098510 35.802 243 136 6 2 237 5 234 9.85e-27 108
MsG0580028083.01.T01 MTR_3g023630 38.660 194 109 5 18 207 8 195 3.50e-26 107
MsG0580028083.01.T01 MTR_7g098480 35.270 241 139 7 2 237 5 233 4.61e-26 108
MsG0580028083.01.T01 MTR_3g099830 30.548 383 170 19 17 323 11 373 7.08e-26 106
MsG0580028083.01.T01 MTR_6g033095 43.137 153 78 3 151 294 32 184 7.73e-26 102
MsG0580028083.01.T01 MTR_3g108560 36.771 223 116 9 18 232 20 225 2.51e-25 103
MsG0580028083.01.T01 MTR_3g108560 36.771 223 116 9 18 232 20 225 6.96e-25 103
MsG0580028083.01.T01 MTR_5g039470 30.060 336 149 13 34 291 1 328 3.36e-24 101
MsG0580028083.01.T01 MTR_3g040700 27.463 335 172 12 16 287 41 367 6.66e-24 101
MsG0580028083.01.T01 MTR_7g115270 32.636 239 133 8 15 233 9 239 7.02e-24 101
MsG0580028083.01.T01 MTR_2g005990 38.579 197 107 6 17 200 5 200 1.23e-23 100
MsG0580028083.01.T01 MTR_3g109982 39.894 188 101 6 16 200 11 189 1.49e-23 101
MsG0580028083.01.T01 MTR_7g114710 37.056 197 104 6 15 202 10 195 1.81e-23 99.8
MsG0580028083.01.T01 MTR_3g108150 33.469 245 129 10 15 245 10 234 1.83e-23 100
MsG0580028083.01.T01 MTR_3g110010 39.894 188 101 6 16 200 11 189 1.91e-23 101
MsG0580028083.01.T01 MTR_0543s0010 32.645 242 142 8 3 240 73 297 2.45e-23 100
MsG0580028083.01.T01 MTR_0492s0020 32.645 242 142 8 3 240 73 297 2.51e-23 100
MsG0580028083.01.T01 MTR_2g007400 34.921 252 131 11 17 243 11 254 6.81e-23 98.6
MsG0580028083.01.T01 MTR_7g098570 33.891 239 147 6 2 237 6 236 1.37e-22 98.2
MsG0580028083.01.T01 MTR_7g056433 34.894 235 131 10 8 230 1 225 2.70e-22 96.7
MsG0580028083.01.T01 MTR_2g036470 32.927 246 152 7 18 255 14 254 2.94e-22 96.7
MsG0580028083.01.T01 MTR_2g036470 33.939 165 97 5 166 321 232 393 1.91e-14 73.9
MsG0580028083.01.T01 MTR_2g008310 28.796 382 187 15 17 324 1 371 3.12e-22 96.7
MsG0580028083.01.T01 MTR_7g007340 29.491 373 161 16 16 318 11 351 6.22e-22 95.5
MsG0580028083.01.T01 MTR_7g034110 28.923 325 178 13 8 294 1 310 6.68e-22 95.1
MsG0580028083.01.T01 MTR_2g007450 30.435 253 144 8 4 230 2 248 1.07e-21 95.5
MsG0580028083.01.T01 MTR_7g060470 31.905 210 141 2 18 225 3 212 3.36e-21 93.6
MsG0580028083.01.T01 MTR_7g034120 28.053 303 137 10 94 321 9 305 5.77e-21 91.7
MsG0580028083.01.T01 MTR_3g105060 35.417 192 113 4 15 202 11 195 8.65e-21 92.0
MsG0580028083.01.T01 MTR_0571s0010 59.036 83 32 1 18 100 32 112 1.03e-20 86.3
MsG0580028083.01.T01 MTR_6g022520 42.515 167 84 5 85 243 1 163 2.59e-20 90.1
MsG0580028083.01.T01 MTR_6g022520 40.714 140 76 3 193 328 181 317 1.16e-18 85.5
MsG0580028083.01.T01 MTR_4g134150 36.126 191 106 8 15 202 11 188 3.21e-20 88.2
MsG0580028083.01.T01 MTR_5g033200 37.888 161 78 6 166 315 24 173 3.32e-20 87.0
MsG0580028083.01.T01 MTR_7g033945 34.444 180 100 6 8 177 1 172 4.96e-20 86.3
MsG0580028083.01.T01 MTR_3g082890 33.816 207 119 6 1 200 1 196 7.77e-20 90.1
MsG0580028083.01.T01 MTR_5g008950 31.532 222 132 6 20 234 1 209 1.11e-19 89.0
MsG0580028083.01.T01 MTR_3g082890 33.816 207 119 6 1 200 81 276 1.15e-19 89.7
MsG0580028083.01.T01 MTR_7g007370 33.929 224 100 6 9 230 8 185 1.62e-19 88.2
MsG0580028083.01.T01 MTR_7g034090 29.341 334 190 13 18 327 4 315 1.82e-19 89.0
MsG0580028083.01.T01 MTR_7g033990 33.750 240 133 9 17 242 10 237 2.09e-19 88.6
MsG0580028083.01.T01 MTR_5g073400 41.481 135 68 5 85 217 1 126 4.61e-19 82.4
MsG0580028083.01.T01 MTR_7g075820 32.068 237 139 5 15 230 3 238 1.53e-18 85.9
MsG0580028083.01.T01 MTR_3g107160 32.524 206 131 3 11 211 3 205 1.82e-18 85.9
MsG0580028083.01.T01 MTR_3g087260 33.962 212 105 6 16 223 10 190 2.34e-18 85.9
MsG0580028083.01.T01 MTR_3g087260 37.963 108 66 1 138 244 200 307 3.37e-13 70.5
MsG0580028083.01.T01 MTR_2g008320 34.673 199 115 8 10 200 44 235 3.54e-18 85.1
MsG0580028083.01.T01 MTR_8g058970 31.111 225 124 9 4 200 5 226 3.64e-18 85.5
MsG0580028083.01.T01 MTR_8g077460 26.110 383 209 12 8 324 1 375 9.21e-18 83.6
MsG0580028083.01.T01 MTR_2g007500 30.417 240 132 8 5 232 3 219 1.01e-17 83.2
MsG0580028083.01.T01 MTR_7g021990 31.579 228 135 6 15 233 45 260 1.49e-17 83.2
MsG0580028083.01.T01 MTR_7g021950 31.579 228 135 6 15 233 45 260 2.37e-17 83.2
MsG0580028083.01.T01 MTR_6g022410 48.864 88 41 2 238 321 17 104 4.97e-17 76.3
MsG0580028083.01.T01 MTR_3g107120 31.890 254 149 8 11 245 2 250 6.32e-17 81.3
MsG0580028083.01.T01 MTR_3g107120 32.192 146 65 4 183 327 282 394 1.76e-11 65.1
MsG0580028083.01.T01 MTR_1g053025 31.381 239 149 9 17 241 1 238 6.68e-17 81.3
MsG0580028083.01.T01 MTR_3g095630 53.846 78 30 2 242 315 101 176 1.52e-16 77.0
MsG0580028083.01.T01 MTR_5g083890 31.276 243 136 8 14 230 2 239 2.06e-16 80.1
MsG0580028083.01.T01 MTR_7g056020 28.010 382 165 17 18 318 16 368 3.51e-16 79.7
MsG0580028083.01.T01 MTR_5g008920 30.769 221 143 6 20 237 14 227 4.02e-16 79.0
MsG0580028083.01.T01 MTR_8g468810 29.048 210 133 6 3 200 10 215 1.30e-15 77.0
MsG0580028083.01.T01 MTR_8g468810 29.048 210 133 6 3 200 10 215 1.44e-15 76.6
MsG0580028083.01.T01 MTR_8g062270 32.836 201 119 5 17 203 15 213 1.57e-15 77.4
MsG0580028083.01.T01 MTR_4g032730 31.527 203 124 5 11 200 8 208 1.91e-15 77.0
MsG0580028083.01.T01 MTR_8g468810 29.048 210 133 6 3 200 10 215 2.10e-15 76.6
MsG0580028083.01.T01 MTR_8g468810 29.048 210 133 6 3 200 10 215 2.63e-15 76.3
MsG0580028083.01.T01 MTR_8g468810 29.048 210 133 6 3 200 10 215 4.03e-15 76.3
MsG0580028083.01.T01 MTR_2g083840 29.902 204 126 7 10 200 13 212 6.60e-15 75.5
MsG0580028083.01.T01 MTR_7g022105 30.000 230 140 6 15 235 46 263 6.91e-15 75.5
MsG0580028083.01.T01 MTR_5g061410 33.047 233 113 9 23 245 10 209 7.08e-15 73.9
MsG0580028083.01.T01 MTR_4g093690 32.075 212 119 9 1 199 1 200 9.10e-15 73.6
MsG0580028083.01.T01 MTR_5g063950 29.767 215 125 3 23 236 13 202 1.04e-14 74.3
MsG0580028083.01.T01 MTR_5g063950 35.172 145 88 2 183 321 215 359 1.45e-14 73.9
MsG0580028083.01.T01 MTR_1g107385 32.000 250 142 8 18 243 32 277 1.07e-14 74.7
MsG0580028083.01.T01 MTR_4g050250 30.172 232 130 9 1 203 1 229 1.80e-14 74.3
MsG0580028083.01.T01 MTR_8g469020 27.329 322 194 13 15 311 4 310 4.15e-14 73.2
MsG0580028083.01.T01 MTR_4g056030 32.000 200 114 8 14 201 5 194 5.12e-14 72.8
MsG0580028083.01.T01 MTR_2g047858 32.701 211 123 8 2 201 99 301 5.25e-14 73.2
MsG0580028083.01.T01 MTR_2g007360 29.960 247 129 11 10 243 4 219 1.39e-13 71.2
MsG0580028083.01.T01 MTR_7g033940 45.349 86 42 2 20 105 96 176 1.63e-13 69.3
MsG0580028083.01.T01 MTR_7g056430 30.493 223 118 9 18 234 9 200 1.90e-13 71.6
MsG0580028083.01.T01 MTR_5g044790 50.602 83 34 3 246 323 359 439 2.29e-13 70.9
MsG0580028083.01.T01 MTR_8g467800 31.905 210 129 7 5 205 4 208 2.51e-13 70.1
MsG0580028083.01.T01 MTR_7g056420 30.493 223 118 9 18 234 9 200 2.56e-13 71.2
MsG0580028083.01.T01 MTR_5g024060 37.398 123 74 2 195 316 80 200 3.68e-13 68.9
MsG0580028083.01.T01 MTR_7g068570 33.333 147 87 4 15 157 2 141 4.02e-13 67.4
MsG0580028083.01.T01 MTR_8g467800 32.039 206 129 6 6 205 8 208 4.16e-13 70.1
MsG0580028083.01.T01 MTR_2g100590 31.193 218 132 8 4 209 30 241 5.79e-13 70.1
MsG0580028083.01.T01 MTR_2g100590 31.193 218 132 8 4 209 30 241 5.79e-13 69.7
MsG0580028083.01.T01 MTR_2g100590 31.193 218 132 8 4 209 30 241 7.40e-13 69.3
MsG0580028083.01.T01 MTR_4g024720 36.290 124 68 5 4 121 5 123 1.04e-12 66.6
MsG0580028083.01.T01 MTR_2g091145 28.846 208 134 6 4 201 7 210 1.26e-12 68.6
MsG0580028083.01.T01 MTR_1g059860 36.842 133 76 3 115 243 38 166 1.36e-12 67.8
MsG0580028083.01.T01 MTR_8g445780 31.132 212 121 7 1 201 1 198 2.00e-12 67.8
MsG0580028083.01.T01 MTR_5g054920 55.769 52 23 0 245 296 128 179 2.48e-12 65.1
MsG0580028083.01.T01 MTR_5g084070 33.679 193 108 5 14 200 9 187 3.02e-12 67.4
MsG0580028083.01.T01 MTR_8g468760 30.622 209 115 7 13 200 4 203 3.06e-12 67.4
MsG0580028083.01.T01 MTR_5g092960 32.877 219 117 7 2 200 3 211 3.61e-12 67.0
MsG0580028083.01.T01 MTR_3g114200 31.737 167 100 6 1 161 1 159 3.77e-12 63.9
MsG0580028083.01.T01 MTR_1377s0010 59.259 54 22 0 241 294 74 127 3.80e-12 63.5
MsG0580028083.01.T01 MTR_1g095750 41.758 91 50 2 15 105 43 130 4.20e-12 63.5
MsG0580028083.01.T01 MTR_4g056020 31.818 198 115 8 14 200 5 193 4.47e-12 67.0
MsG0580028083.01.T01 MTR_5g092960 33.032 221 114 7 2 200 3 211 5.16e-12 67.0
MsG0580028083.01.T01 MTR_8g070950 30.516 213 117 9 5 203 7 202 5.92e-12 66.6
MsG0580028083.01.T01 MTR_1g016340 29.245 212 134 6 1 200 3 210 9.33e-12 65.9
MsG0580028083.01.T01 MTR_1g013560 28.780 205 127 6 13 205 14 211 1.37e-11 65.1
MsG0580028083.01.T01 MTR_8g058965 27.602 221 131 7 8 203 1 217 1.44e-11 65.5
MsG0580028083.01.T01 MTR_8g014290 32.704 159 88 6 12 152 2 159 1.74e-11 62.0
MsG0580028083.01.T01 MTR_1g016340 29.469 207 130 6 6 200 3 205 1.90e-11 65.1
MsG0580028083.01.T01 MTR_8g062010 29.949 197 118 8 18 203 9 196 2.13e-11 64.7
MsG0580028083.01.T01 MTR_7g098590 38.739 111 60 3 2 112 5 107 2.38e-11 61.2
MsG0580028083.01.T01 MTR_1g013560 28.780 205 127 6 13 205 14 211 2.45e-11 64.7
MsG0580028083.01.T01 MTR_8g062310 29.493 217 129 9 1 205 1 205 2.62e-11 64.7
MsG0580028083.01.T01 MTR_1g090900 32.597 181 105 8 8 181 1 171 3.13e-11 62.4
MsG0580028083.01.T01 MTR_8g014260 28.111 217 131 5 2 201 4 212 3.55e-11 64.3
MsG0580028083.01.T01 MTR_1g021820 28.230 209 128 6 5 200 11 210 4.15e-11 63.9
MsG0580028083.01.T01 MTR_4g098590 28.889 225 140 7 20 228 1 221 5.44e-11 63.5
MsG0580028083.01.T01 MTR_1g016310 28.037 214 131 7 1 200 3 207 7.16e-11 62.8
MsG0580028083.01.T01 MTR_1g016310 28.037 214 131 7 1 200 3 207 8.54e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028083.01.T01 AT3G59200 37.688 199 110 6 18 207 7 200 1.40e-22 97.1
MsG0580028083.01.T01 AT5G41840 33.981 206 104 6 18 200 14 210 2.22e-22 98.2
MsG0580028083.01.T01 AT3G59200 37.688 199 110 6 18 207 7 200 2.74e-22 97.8
MsG0580028083.01.T01 AT4G10400 33.862 189 113 4 17 200 1 182 6.92e-20 90.1
MsG0580028083.01.T01 AT4G10400 33.862 189 113 4 17 200 1 182 6.92e-20 90.1
MsG0580028083.01.T01 AT4G10400 33.862 189 113 4 17 200 1 182 6.92e-20 90.1
MsG0580028083.01.T01 AT4G09920 33.333 189 114 4 17 200 1 182 7.38e-20 89.0
MsG0580028083.01.T01 AT4G09920 33.333 189 114 4 17 200 1 182 7.38e-20 89.0
MsG0580028083.01.T01 AT4G09920 33.333 189 114 4 17 200 1 182 8.14e-20 88.2
MsG0580028083.01.T01 AT4G09920 33.333 189 114 4 17 200 1 182 8.14e-20 88.2
MsG0580028083.01.T01 AT4G09920 33.333 189 114 4 17 200 1 182 8.14e-20 88.2
MsG0580028083.01.T01 AT1G78750 30.233 215 133 6 1 204 1 209 4.53e-19 88.2
MsG0580028083.01.T01 AT1G78750 30.233 215 133 6 1 204 1 209 4.53e-19 88.2
MsG0580028083.01.T01 AT5G41830 31.308 214 120 6 14 207 9 215 3.28e-18 85.5
MsG0580028083.01.T01 AT3G58880 36.224 196 108 6 17 201 2 191 3.95e-18 85.1
MsG0580028083.01.T01 AT4G00320 31.308 214 120 6 14 207 9 215 5.15e-18 85.1
MsG0580028083.01.T01 AT3G59190 33.636 220 113 9 6 207 4 208 7.93e-18 84.0
MsG0580028083.01.T01 AT3G59190 33.636 220 113 9 6 207 4 208 1.01e-17 84.3
MsG0580028083.01.T01 AT1G16930 32.569 218 118 9 18 228 15 210 1.03e-17 84.0
MsG0580028083.01.T01 AT1G16930 32.569 218 118 9 18 228 15 210 1.03e-17 84.0
MsG0580028083.01.T01 AT1G16930 32.569 218 118 9 18 228 15 210 1.03e-17 84.0
MsG0580028083.01.T01 AT5G62970 35.681 213 102 8 17 200 1 207 1.79e-17 83.2
MsG0580028083.01.T01 AT5G25850 32.836 201 119 6 4 200 6 194 1.01e-16 81.3
MsG0580028083.01.T01 AT5G38392 36.893 206 96 10 17 200 1 194 1.32e-16 77.8
MsG0580028083.01.T01 AT4G00160 34.197 193 114 5 18 204 16 201 1.37e-16 80.5
MsG0580028083.01.T01 AT5G53635 31.915 188 117 4 20 203 2 182 2.63e-16 79.7
MsG0580028083.01.T01 AT3G58860 35.354 198 106 7 16 200 5 193 3.75e-16 79.3
MsG0580028083.01.T01 AT4G14096 34.031 191 110 6 18 200 8 190 6.99e-16 78.6
MsG0580028083.01.T01 AT4G14096 34.031 191 110 6 18 200 8 190 6.99e-16 78.6
MsG0580028083.01.T01 AT5G22670 31.606 193 118 5 18 206 11 193 7.57e-16 78.6
MsG0580028083.01.T01 AT3G59160 34.211 228 110 11 4 200 3 221 7.88e-16 78.6
MsG0580028083.01.T01 AT4G14103 34.555 191 111 6 18 200 8 192 8.94e-16 77.8
MsG0580028083.01.T01 AT4G14103 34.555 191 111 6 18 200 8 192 8.94e-16 77.8
MsG0580028083.01.T01 AT4G14103 34.555 191 111 6 18 200 8 192 9.46e-16 78.2
MsG0580028083.01.T01 AT3G58940 30.736 231 125 7 17 223 1 220 1.74e-15 77.8
MsG0580028083.01.T01 AT3G58940 30.736 231 125 7 17 223 1 220 1.74e-15 77.8
MsG0580028083.01.T01 AT2G26860 33.668 199 112 6 17 204 1 190 2.25e-15 76.6
MsG0580028083.01.T01 AT2G26860 33.668 199 112 6 17 204 1 190 2.25e-15 76.6
MsG0580028083.01.T01 AT3G59170 33.645 214 108 9 18 200 7 217 2.46e-15 77.0
MsG0580028083.01.T01 AT1G69630 28.708 209 137 4 1 204 1 202 2.97e-15 76.6
MsG0580028083.01.T01 AT1G66290 28.947 190 125 4 16 204 27 207 3.10e-15 76.6
MsG0580028083.01.T01 AT3G59210 33.171 205 121 7 13 207 2 200 3.61e-15 76.6
MsG0580028083.01.T01 AT3G59210 33.171 205 121 7 13 207 2 200 3.61e-15 76.6
MsG0580028083.01.T01 AT3G59210 33.171 205 121 7 13 207 2 200 3.61e-15 76.6
MsG0580028083.01.T01 AT3G59210 33.171 205 121 7 13 207 2 200 3.61e-15 76.6
MsG0580028083.01.T01 AT3G59210 33.171 205 121 7 13 207 2 200 3.61e-15 76.6
MsG0580028083.01.T01 AT4G15060 27.854 219 143 5 1 211 9 220 4.25e-15 76.3
MsG0580028083.01.T01 AT1G58310 34.928 209 105 7 18 201 8 210 4.60e-15 76.3
MsG0580028083.01.T01 AT3G49150 33.173 208 118 7 12 207 10 208 5.78e-15 75.9
MsG0580028083.01.T01 AT5G38390 33.168 202 112 7 17 211 1 186 5.90e-15 75.9
MsG0580028083.01.T01 AT1G66310 29.268 205 132 6 4 204 5 200 6.59e-15 75.5
MsG0580028083.01.T01 AT4G26340 31.053 190 116 4 17 200 1 181 7.17e-15 75.5
MsG0580028083.01.T01 AT3G44060 30.366 191 109 5 23 200 4 183 7.72e-15 75.5
MsG0580028083.01.T01 AT4G22280 33.158 190 113 5 17 201 1 181 8.48e-15 74.7
MsG0580028083.01.T01 AT3G50710 30.729 192 118 4 17 200 1 185 9.03e-15 75.1
MsG0580028083.01.T01 AT3G26922 28.571 203 133 4 6 204 2 196 1.05e-14 73.9
MsG0580028083.01.T01 AT3G26922 28.571 203 133 4 6 204 2 196 1.05e-14 73.9
MsG0580028083.01.T01 AT4G13960 32.579 221 123 8 17 223 1 209 1.09e-14 75.1
MsG0580028083.01.T01 AT4G13960 32.579 221 123 8 17 223 1 209 1.09e-14 75.1
MsG0580028083.01.T01 AT5G38590 29.876 241 127 7 17 242 1 214 1.10e-14 73.6
MsG0580028083.01.T01 AT4G22280 33.158 190 113 5 17 201 1 181 1.28e-14 74.7
MsG0580028083.01.T01 AT5G53840 28.141 199 126 5 11 204 11 197 1.73e-14 74.3
MsG0580028083.01.T01 AT5G38590 29.876 241 127 7 17 242 1 214 1.76e-14 74.3
MsG0580028083.01.T01 AT5G56690 31.527 203 112 6 17 204 1 191 1.77e-14 73.9
MsG0580028083.01.T01 AT3G59240 31.443 194 115 8 18 200 8 194 1.79e-14 74.3
MsG0580028083.01.T01 AT4G15060 29.064 203 129 5 17 211 171 366 1.95e-14 74.3
MsG0580028083.01.T01 AT1G64540 34.409 186 101 8 20 201 7 175 2.06e-14 73.9
MsG0580028083.01.T01 AT1G64540 34.409 186 101 8 20 201 7 175 2.06e-14 73.9
MsG0580028083.01.T01 AT5G56420 29.843 191 123 4 18 204 6 189 2.16e-14 73.9
MsG0580028083.01.T01 AT5G56420 29.843 191 123 4 18 204 6 189 2.16e-14 73.9
MsG0580028083.01.T01 AT5G56420 29.843 191 123 4 18 204 6 189 2.16e-14 73.9
MsG0580028083.01.T01 AT5G38386 35.664 143 76 5 17 149 1 137 3.83e-14 73.2
MsG0580028083.01.T01 AT5G38386 35.664 143 76 5 17 149 1 137 3.83e-14 73.2
MsG0580028083.01.T01 AT3G52680 34.184 196 109 7 18 204 21 205 5.61e-14 72.4
MsG0580028083.01.T01 AT3G52680 34.184 196 109 7 18 204 21 205 7.21e-14 72.4
MsG0580028083.01.T01 AT1G48400 32.547 212 123 8 8 211 1 200 7.95e-14 72.4
MsG0580028083.01.T01 AT1G48400 32.701 211 122 8 8 210 1 199 8.91e-14 72.4
MsG0580028083.01.T01 AT4G00315 29.231 195 126 5 17 204 1 190 1.05e-13 72.0
MsG0580028083.01.T01 AT2G42720 32.990 194 116 7 17 200 1 190 1.28e-13 71.6
MsG0580028083.01.T01 AT3G62440 32.057 209 110 9 17 202 1 200 1.62e-13 71.2
MsG0580028083.01.T01 AT5G56370 31.313 198 112 6 17 204 1 184 2.10e-13 70.5
MsG0580028083.01.T01 AT3G60040 30.469 256 146 10 12 238 217 469 2.20e-13 71.2
MsG0580028083.01.T01 AT3G60040 30.469 256 146 10 12 238 219 471 2.28e-13 71.2
MsG0580028083.01.T01 AT3G59000 35.000 180 96 6 17 181 1 174 2.35e-13 70.9
MsG0580028083.01.T01 AT3G60040 30.453 243 144 9 18 238 13 252 2.38e-13 71.2
MsG0580028083.01.T01 AT3G60040 30.469 256 146 10 12 238 219 471 2.59e-13 71.2
MsG0580028083.01.T01 AT3G60040 30.469 256 146 10 12 238 220 472 2.64e-13 71.2
MsG0580028083.01.T01 AT3G44810 30.041 243 134 7 23 246 12 237 2.93e-13 70.5
MsG0580028083.01.T01 AT1G32375 29.648 199 124 5 17 207 1 191 3.55e-13 70.5
MsG0580028083.01.T01 AT1G32375 29.648 199 124 5 17 207 1 191 3.55e-13 70.5
MsG0580028083.01.T01 AT5G56370 31.313 198 112 6 17 204 1 184 4.18e-13 70.1
MsG0580028083.01.T01 AT5G56370 31.313 198 112 6 17 204 1 184 4.18e-13 70.1
MsG0580028083.01.T01 AT5G60610 29.956 227 130 7 17 233 1 208 4.23e-13 70.1
MsG0580028083.01.T01 AT5G60610 29.956 227 130 7 17 233 1 208 4.23e-13 70.1
MsG0580028083.01.T01 AT5G38396 32.843 204 107 9 17 200 1 194 4.24e-13 70.1
MsG0580028083.01.T01 AT1G51370 28.205 234 137 9 18 233 19 239 5.08e-13 69.3
MsG0580028083.01.T01 AT5G22700 32.195 205 117 7 16 212 41 231 5.13e-13 69.7
MsG0580028083.01.T01 AT5G56410 31.925 213 116 8 17 206 1 207 5.36e-13 70.1
MsG0580028083.01.T01 AT5G22700 32.195 205 117 7 16 212 41 231 5.70e-13 69.7
MsG0580028083.01.T01 AT1G51370 28.205 234 137 9 18 233 19 239 5.79e-13 69.7
MsG0580028083.01.T01 AT5G22700 32.195 205 117 7 16 212 4 194 6.17e-13 69.7
MsG0580028083.01.T01 AT5G22700 32.195 205 117 7 16 212 4 194 6.17e-13 69.7
MsG0580028083.01.T01 AT5G22700 32.195 205 117 7 16 212 4 194 6.17e-13 69.7
MsG0580028083.01.T01 AT5G22700 32.195 205 117 7 16 212 4 194 6.17e-13 69.7
MsG0580028083.01.T01 AT1G51370 28.205 234 137 9 18 233 19 239 6.85e-13 69.3
MsG0580028083.01.T01 AT4G27050 31.373 204 113 7 18 200 4 201 7.20e-13 69.3
MsG0580028083.01.T01 AT4G27050 31.373 204 113 7 18 200 4 201 7.20e-13 69.3
MsG0580028083.01.T01 AT4G27050 31.373 204 113 7 18 200 4 201 7.20e-13 69.3
MsG0580028083.01.T01 AT4G27050 31.373 204 113 7 18 200 4 201 7.20e-13 69.3
MsG0580028083.01.T01 AT4G27050 31.373 204 113 7 18 200 4 201 7.20e-13 69.3
MsG0580028083.01.T01 AT5G53640 26.866 201 129 6 16 212 20 206 7.30e-13 67.4
MsG0580028083.01.T01 AT1G60410 29.327 208 122 8 8 203 1 195 8.03e-13 69.3
MsG0580028083.01.T01 AT5G56400 27.751 209 138 6 1 204 16 216 8.29e-13 69.3
MsG0580028083.01.T01 AT5G44950 27.632 228 140 6 18 239 4 212 8.60e-13 69.3
MsG0580028083.01.T01 AT3G58820 33.987 153 81 5 17 155 1 147 1.10e-12 68.9
MsG0580028083.01.T01 AT5G56560 34.392 189 111 7 16 200 3 182 1.29e-12 68.6
MsG0580028083.01.T01 AT3G59000 27.987 318 161 12 17 300 1 284 2.19e-12 67.4
MsG0580028083.01.T01 AT5G56560 34.392 189 111 7 16 200 3 182 2.83e-12 67.8
MsG0580028083.01.T01 AT5G22660 28.571 259 148 9 4 251 3 235 4.55e-12 66.2
MsG0580028083.01.T01 AT2G42730 30.808 198 115 9 18 200 5 195 6.25e-12 66.6
MsG0580028083.01.T01 AT1G52650 30.631 222 127 7 17 223 1 210 8.03e-12 66.2
MsG0580028083.01.T01 AT5G22660 28.571 259 148 9 4 251 3 235 8.63e-12 66.2
MsG0580028083.01.T01 AT1G55660 28.272 191 125 5 17 200 52 237 8.97e-12 65.9
MsG0580028083.01.T01 AT2G26030 28.061 196 120 6 18 204 4 187 1.10e-11 65.9
MsG0580028083.01.T01 AT2G26030 28.061 196 120 6 18 204 4 187 1.10e-11 65.9
MsG0580028083.01.T01 AT2G26030 28.061 196 120 6 18 204 4 187 1.10e-11 65.9
MsG0580028083.01.T01 AT1G55660 28.272 191 125 5 17 200 52 237 1.16e-11 65.9
MsG0580028083.01.T01 AT3G59230 30.476 210 122 8 15 207 10 212 1.67e-11 65.5
MsG0580028083.01.T01 AT5G38590 26.441 295 157 10 17 294 1 252 1.84e-11 64.3
MsG0580028083.01.T01 AT4G26350 27.411 197 122 6 17 204 1 185 1.87e-11 65.1
MsG0580028083.01.T01 AT1G78760 26.500 200 134 6 4 200 6 195 2.04e-11 65.1
MsG0580028083.01.T01 AT5G44940 30.412 194 127 4 16 204 3 193 2.36e-11 64.7
MsG0580028083.01.T01 AT3G58900 34.694 196 110 7 17 201 1 189 2.53e-11 63.9
MsG0580028083.01.T01 AT3G58900 34.694 196 110 7 17 201 1 189 2.54e-11 64.3
MsG0580028083.01.T01 AT3G58900 34.694 196 110 7 17 201 1 189 2.54e-11 64.3
MsG0580028083.01.T01 AT5G56440 28.571 231 141 8 17 238 1 216 3.18e-11 64.3
MsG0580028083.01.T01 AT3G58900 34.694 196 110 7 17 201 1 189 3.90e-11 64.3
MsG0580028083.01.T01 AT3G03040 30.622 209 126 5 17 212 1 203 4.56e-11 63.9
MsG0580028083.01.T01 AT3G58980 31.500 200 106 8 17 200 1 185 5.50e-11 63.9
MsG0580028083.01.T01 AT5G56820 33.166 199 113 7 11 203 8 192 7.48e-11 63.2
MsG0580028083.01.T01 AT5G56810 34.359 195 102 9 18 200 15 195 9.57e-11 62.4

Find 57 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTGGCAATGTCCAATTT+TGG 0.184981 5:+74350155 MsG0580028083.01.T01:CDS
TTGCCAATCCTTGGATAAAT+TGG 0.202313 5:-74350142 None:intergenic
TCGCTGATTCTATCCATCTT+TGG 0.255439 5:-74349178 None:intergenic
AGATGCTTGAAGGAATTATT+AGG 0.283001 5:-74350309 None:intergenic
ATCCTACATTTGAAATTTGT+TGG 0.295155 5:+74349652 MsG0580028083.01.T01:CDS
ACACATTCAAGATCCAAAAT+TGG 0.299269 5:-74350168 None:intergenic
CGCTGATTCTATCCATCTTT+GGG 0.328363 5:-74349177 None:intergenic
CCTCAAGTTTCATAACTACT+AGG 0.345024 5:-74349579 None:intergenic
TTTCATAACTACTAGGGTTT+CGG 0.354655 5:-74349572 None:intergenic
TGTATTATTTATAACTTTGA+AGG 0.359111 5:+74350210 MsG0580028083.01.T01:CDS
CCTTGCATTCCGCAGAATAT+AGG 0.365976 5:-74350259 None:intergenic
TTCTACAATTAGATGCTTGA+AGG 0.386751 5:-74350319 None:intergenic
TGCTCTAACACACTTGGATA+AGG 0.394060 5:-74349797 None:intergenic
TCCTCAGCACAACGCCGTTT+AGG 0.398465 5:-74349499 None:intergenic
GCTCTAACACACTTGGATAA+GGG 0.411582 5:-74349796 None:intergenic
AATTGGACATTGCCAATCCT+TGG 0.425720 5:-74350151 None:intergenic
ACATTATAAAATACATCAAA+TGG 0.429945 5:-74349841 None:intergenic
TTCATAGTCGAAGTTGAGAT+TGG 0.433859 5:-74349308 None:intergenic
TTACCAATTTATCCAAGGAT+TGG 0.459769 5:+74350139 MsG0580028083.01.T01:CDS
GTGTTCAAATCTTCTAGAAC+AGG 0.480215 5:-74349718 None:intergenic
AACCAACAAATTTCAAATGT+AGG 0.483121 5:-74349654 None:intergenic
CCTATATTCTGCGGAATGCA+AGG 0.496946 5:+74350259 MsG0580028083.01.T01:CDS
AGTCAAGGTGTAGTTATTCA+TGG 0.501280 5:-74349533 None:intergenic
CTCAAGTTTCATAACTACTA+GGG 0.503525 5:-74349578 None:intergenic
ATCAACACCTCTTTGACGCA+TGG 0.514280 5:+74349467 MsG0580028083.01.T01:CDS
CATGGGTGGAAGCACCTAAA+CGG 0.514726 5:+74349485 MsG0580028083.01.T01:CDS
CGCCGTAGAAATCCTTGGAC+AGG 0.519271 5:-74350352 None:intergenic
GTCGTCAGAGGACCCAAAGA+TGG 0.531377 5:+74349165 MsG0580028083.01.T01:CDS
TTACACGCCGTAGAAATCCT+TGG 0.533442 5:-74350357 None:intergenic
AAGAAATATCATCCTGTCCA+AGG 0.559485 5:+74350340 MsG0580028083.01.T01:CDS
GGGCTCATCGTCCTTTGCAA+AGG 0.560320 5:-74349332 None:intergenic
GGTAGTAAACGCTTGTCTGA+TGG 0.561954 5:-74349242 None:intergenic
TAGTCGAAGTTGAGATTGGT+GGG 0.564776 5:-74349304 None:intergenic
CCACAGTTCTTTCGAAGCAG+TGG 0.568400 5:+74349263 MsG0580028083.01.T01:CDS
TCAACACCTCTTTGACGCAT+GGG 0.568559 5:+74349468 MsG0580028083.01.T01:CDS
GTAGTAAACGCTTGTCTGAT+GGG 0.569480 5:-74349241 None:intergenic
ACCTAAACGGCGTTGTGCTG+AGG 0.569852 5:+74349498 MsG0580028083.01.T01:CDS
ATAGTCGAAGTTGAGATTGG+TGG 0.571824 5:-74349305 None:intergenic
GTGGCTTACCAATTTATCCA+AGG 0.574219 5:+74350134 MsG0580028083.01.T01:intron
GATATCTGCTCTAACACACT+TGG 0.578144 5:-74349803 None:intergenic
TAACTTTGAAGGCTCAGAAG+AGG 0.581790 5:+74350221 MsG0580028083.01.T01:CDS
AATTTGCAACCTATATTCTG+CGG 0.583626 5:+74350250 MsG0580028083.01.T01:CDS
CGACTATGAAACCTTTGCAA+AGG 0.600327 5:+74349321 MsG0580028083.01.T01:CDS
ATCCTGTCCAAGGATTTCTA+CGG 0.610254 5:+74350350 MsG0580028083.01.T01:CDS
ACACCTCTTTGACGCATGGG+TGG 0.617105 5:+74349471 MsG0580028083.01.T01:CDS
AACTAGAACCACCACAGTTG+AGG 0.619736 5:-74349432 None:intergenic
CCTAGTAGTTATGAAACTTG+AGG 0.624967 5:+74349579 MsG0580028083.01.T01:CDS
ATGTGACACAACAATTCAGT+AGG 0.625457 5:-74349205 None:intergenic
AAACAACAGAAACGATGGAA+GGG 0.628221 5:-74349352 None:intergenic
ACGTTTAGCCTCAACTGTGG+TGG 0.629576 5:+74349424 MsG0580028083.01.T01:CDS
AAGAATGGCACAGTCGTCAG+AGG 0.631566 5:+74349153 MsG0580028083.01.T01:CDS
AAAACAACAGAAACGATGGA+AGG 0.633426 5:-74349353 None:intergenic
CTTCCACCCATGCGTCAAAG+AGG 0.641323 5:-74349474 None:intergenic
TCACAAAACAACAGAAACGA+TGG 0.648812 5:-74349357 None:intergenic
TTTCAGATAGACAATACGAA+AGG 0.662135 5:-74349740 None:intergenic
CCACTGCTTCGAAAGAACTG+TGG 0.704062 5:-74349263 None:intergenic
AAAACGTTTAGCCTCAACTG+TGG 0.719661 5:+74349421 MsG0580028083.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTATAAAATACATCAAA+TGG - Chr5:74349844-74349863 None:intergenic 15.0%
!! TGTATTATTTATAACTTTGA+AGG + Chr5:74350210-74350229 MsG0580028083.01.T01:CDS 15.0%
!! ACAAAAATAATACAACAGAA+GGG + Chr5:74349767-74349786 MsG0580028083.01.T01:CDS 20.0%
!! ACAAATAATAAACACAGAAA+GGG + Chr5:74349873-74349892 MsG0580028083.01.T01:intron 20.0%
!! TACAAATAATAAACACAGAA+AGG + Chr5:74349872-74349891 MsG0580028083.01.T01:intron 20.0%
!!! ATTTTAAAACTTTGAAGCTT+AGG - Chr5:74350020-74350039 None:intergenic 20.0%
!!! TCAAAGTTTTAAAATTGCAA+AGG + Chr5:74350025-74350044 MsG0580028083.01.T01:intron 20.0%
! AACCAACAAATTTCAAATGT+AGG - Chr5:74349657-74349676 None:intergenic 25.0%
! ATGATATGAAGAAAATCAAC+AGG - Chr5:74350076-74350095 None:intergenic 25.0%
! GACAAAAATAATACAACAGA+AGG + Chr5:74349766-74349785 MsG0580028083.01.T01:CDS 25.0%
!! ATCCTACATTTGAAATTTGT+TGG + Chr5:74349652-74349671 MsG0580028083.01.T01:CDS 25.0%
!! TTTAAAATTGCAAAGGTTTG+TGG + Chr5:74350032-74350051 MsG0580028083.01.T01:intron 25.0%
AATTTGCAACCTATATTCTG+CGG + Chr5:74350250-74350269 MsG0580028083.01.T01:CDS 30.0%
ACACATTCAAGATCCAAAAT+TGG - Chr5:74350171-74350190 None:intergenic 30.0%
AGATGCTTGAAGGAATTATT+AGG - Chr5:74350312-74350331 None:intergenic 30.0%
CTCAAGTTTCATAACTACTA+GGG - Chr5:74349581-74349600 None:intergenic 30.0%
GAGTCCTAACAAAAAAAGAA+TGG + Chr5:74349138-74349157 MsG0580028083.01.T01:CDS 30.0%
GGTTTCGGATGAAAAAATAA+TGG - Chr5:74349560-74349579 None:intergenic 30.0%
TGAAAAAATAATGGCAGTCA+AGG - Chr5:74349551-74349570 None:intergenic 30.0%
TTACCAATTTATCCAAGGAT+TGG + Chr5:74350139-74350158 MsG0580028083.01.T01:CDS 30.0%
TTCTACAATTAGATGCTTGA+AGG - Chr5:74350322-74350341 None:intergenic 30.0%
TTTCAGATAGACAATACGAA+AGG - Chr5:74349743-74349762 None:intergenic 30.0%
TTTCATAACTACTAGGGTTT+CGG - Chr5:74349575-74349594 None:intergenic 30.0%
!! AAATGTAGGATTTTGAGTGA+TGG - Chr5:74349643-74349662 None:intergenic 30.0%
!!! TGTGCCATTCTTTTTTTGTT+AGG - Chr5:74349145-74349164 None:intergenic 30.0%
AAAACAACAGAAACGATGGA+AGG - Chr5:74349356-74349375 None:intergenic 35.0%
AAACAACAGAAACGATGGAA+GGG - Chr5:74349355-74349374 None:intergenic 35.0%
AAGAAATATCATCCTGTCCA+AGG + Chr5:74350340-74350359 MsG0580028083.01.T01:CDS 35.0%
AGTCAAGGTGTAGTTATTCA+TGG - Chr5:74349536-74349555 None:intergenic 35.0%
ATGTGACACAACAATTCAGT+AGG - Chr5:74349208-74349227 None:intergenic 35.0%
ATTCAACTCCGCTTATGTTT+AGG + Chr5:74349939-74349958 MsG0580028083.01.T01:intron 35.0%
CAGTAAACCCTAAACATAAG+CGG - Chr5:74349950-74349969 None:intergenic 35.0%
CCTAGTAGTTATGAAACTTG+AGG + Chr5:74349579-74349598 MsG0580028083.01.T01:CDS 35.0%
CCTCAAGTTTCATAACTACT+AGG - Chr5:74349582-74349601 None:intergenic 35.0%
CTTGAGGAGTTAAAAATTGC+AGG + Chr5:74349595-74349614 MsG0580028083.01.T01:CDS 35.0%
TATTCTCAATGCGATACATC+TGG - Chr5:74349900-74349919 None:intergenic 35.0%
TCACAAAACAACAGAAACGA+TGG - Chr5:74349360-74349379 None:intergenic 35.0%
TTCAACTCCGCTTATGTTTA+GGG + Chr5:74349940-74349959 MsG0580028083.01.T01:intron 35.0%
TTCATAGTCGAAGTTGAGAT+TGG - Chr5:74349311-74349330 None:intergenic 35.0%
TTGCCAATCCTTGGATAAAT+TGG - Chr5:74350145-74350164 None:intergenic 35.0%
!! GTGTTCAAATCTTCTAGAAC+AGG - Chr5:74349721-74349740 None:intergenic 35.0%
!! TTGAGGCTAAACGTTTTGAT+GGG - Chr5:74349418-74349437 None:intergenic 35.0%
AAAACGTTTAGCCTCAACTG+TGG + Chr5:74349421-74349440 MsG0580028083.01.T01:CDS 40.0%
AATTGGACATTGCCAATCCT+TGG - Chr5:74350154-74350173 None:intergenic 40.0%
AATTGGTAAGCCACTGTCAA+AGG - Chr5:74350128-74350147 None:intergenic 40.0%
ACTTCTATCTTGGCTGGAAT+GGG + Chr5:74349970-74349989 MsG0580028083.01.T01:intron 40.0%
ATAGTCGAAGTTGAGATTGG+TGG - Chr5:74349308-74349327 None:intergenic 40.0%
ATCCTGTCCAAGGATTTCTA+CGG + Chr5:74350350-74350369 MsG0580028083.01.T01:CDS 40.0%
ATTGGTAAGCCACTGTCAAA+GGG - Chr5:74350127-74350146 None:intergenic 40.0%
CGACTATGAAACCTTTGCAA+AGG + Chr5:74349321-74349340 MsG0580028083.01.T01:CDS 40.0%
GATATCTGCTCTAACACACT+TGG - Chr5:74349806-74349825 None:intergenic 40.0%
GCTCTAACACACTTGGATAA+GGG - Chr5:74349799-74349818 None:intergenic 40.0%
GTAGTAAACGCTTGTCTGAT+GGG - Chr5:74349244-74349263 None:intergenic 40.0%
GTGGCTTACCAATTTATCCA+AGG + Chr5:74350134-74350153 MsG0580028083.01.T01:intron 40.0%
TAGTCGAAGTTGAGATTGGT+GGG - Chr5:74349307-74349326 None:intergenic 40.0%
TGCTCTAACACACTTGGATA+AGG - Chr5:74349800-74349819 None:intergenic 40.0%
! GTTGAGGCTAAACGTTTTGA+TGG - Chr5:74349419-74349438 None:intergenic 40.0%
! TAACTTTGAAGGCTCAGAAG+AGG + Chr5:74350221-74350240 MsG0580028083.01.T01:CDS 40.0%
! TTTTGTATCCCCTTTGACAG+TGG + Chr5:74350115-74350134 MsG0580028083.01.T01:intron 40.0%
!! CGCTGATTCTATCCATCTTT+GGG - Chr5:74349180-74349199 None:intergenic 40.0%
!! GGATTGGCAATGTCCAATTT+TGG + Chr5:74350155-74350174 MsG0580028083.01.T01:CDS 40.0%
!! GGGTTTACTGACTTCTATCT+TGG + Chr5:74349960-74349979 MsG0580028083.01.T01:intron 40.0%
!! TCGCTGATTCTATCCATCTT+TGG - Chr5:74349181-74349200 None:intergenic 40.0%
!! TTACTGACTTCTATCTTGGC+TGG + Chr5:74349964-74349983 MsG0580028083.01.T01:intron 40.0%
AACTAGAACCACCACAGTTG+AGG - Chr5:74349435-74349454 None:intergenic 45.0%
ATCAACACCTCTTTGACGCA+TGG + Chr5:74349467-74349486 MsG0580028083.01.T01:CDS 45.0%
CCTATATTCTGCGGAATGCA+AGG + Chr5:74350259-74350278 MsG0580028083.01.T01:CDS 45.0%
CCTTGCATTCCGCAGAATAT+AGG - Chr5:74350262-74350281 None:intergenic 45.0%
GACTTCTATCTTGGCTGGAA+TGG + Chr5:74349969-74349988 MsG0580028083.01.T01:intron 45.0%
GGTAGTAAACGCTTGTCTGA+TGG - Chr5:74349245-74349264 None:intergenic 45.0%
TCAACACCTCTTTGACGCAT+GGG + Chr5:74349468-74349487 MsG0580028083.01.T01:CDS 45.0%
TTACACGCCGTAGAAATCCT+TGG - Chr5:74350360-74350379 None:intergenic 45.0%
TTGGTAAGCCACTGTCAAAG+GGG - Chr5:74350126-74350145 None:intergenic 45.0%
!! GGCTAAACGTTTTGATGGGT+TGG - Chr5:74349414-74349433 None:intergenic 45.0%
AAGAATGGCACAGTCGTCAG+AGG + Chr5:74349153-74349172 MsG0580028083.01.T01:CDS 50.0%
ACGTTTAGCCTCAACTGTGG+TGG + Chr5:74349424-74349443 MsG0580028083.01.T01:CDS 50.0%
CCACAGTTCTTTCGAAGCAG+TGG + Chr5:74349263-74349282 MsG0580028083.01.T01:CDS 50.0%
CCACTGCTTCGAAAGAACTG+TGG - Chr5:74349266-74349285 None:intergenic 50.0%
!! CATGGGTGGAAGCACCTAAA+CGG + Chr5:74349485-74349504 MsG0580028083.01.T01:CDS 50.0%
ACACCTCTTTGACGCATGGG+TGG + Chr5:74349471-74349490 MsG0580028083.01.T01:CDS 55.0%
ACCTAAACGGCGTTGTGCTG+AGG + Chr5:74349498-74349517 MsG0580028083.01.T01:CDS 55.0%
CGCCGTAGAAATCCTTGGAC+AGG - Chr5:74350355-74350374 None:intergenic 55.0%
CTTCCACCCATGCGTCAAAG+AGG - Chr5:74349477-74349496 None:intergenic 55.0%
GGGCTCATCGTCCTTTGCAA+AGG - Chr5:74349335-74349354 None:intergenic 55.0%
GTCGTCAGAGGACCCAAAGA+TGG + Chr5:74349165-74349184 MsG0580028083.01.T01:CDS 55.0%
TCCTCAGCACAACGCCGTTT+AGG - Chr5:74349502-74349521 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 74349136 74350407 74349136 ID=MsG0580028083.01;Name=MsG0580028083.01
Chr5 mRNA 74349136 74350407 74349136 ID=MsG0580028083.01.T01;Parent=MsG0580028083.01;Name=MsG0580028083.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|1|1|2|0|328
Chr5 exon 74349136 74349849 74349136 ID=MsG0580028083.01.T01:exon:23705;Parent=MsG0580028083.01.T01
Chr5 exon 74350135 74350407 74350135 ID=MsG0580028083.01.T01:exon:23706;Parent=MsG0580028083.01.T01
Chr5 CDS 74349136 74349849 74349136 ID=MsG0580028083.01.T01:cds;Parent=MsG0580028083.01.T01
Chr5 CDS 74350135 74350407 74350135 ID=MsG0580028083.01.T01:cds;Parent=MsG0580028083.01.T01
Gene Sequence

>MsG0580028083.01.T01

ATGAGTCCTAACAAAAAAAGAATGGCACAGTCGTCAGAGGACCCAAAGATGGATAGAATCAGCGATTTACCTACTGAATTGTTGTGTCACATACTCTCTCTTCTTCCCATCAGACAAGCGTTTACTACCACAGTTCTTTCGAAGCAGTGGACGCAACTCAGCTATTCACCCACCAATCTCAACTTCGACTATGAAACCTTTGCAAAGGACGATGAGCCCTTCCATCGTTTCTGTTGTTTTGTGAACACTGTCATGCTCTCTCATCACTCATCAAGCCAACCCATCAAAACGTTTAGCCTCAACTGTGGTGGTTCTAGTTTCAGTGATTCTGATCAACACCTCTTTGACGCATGGGTGGAAGCACCTAAACGGCGTTGTGCTGAGGAATTTCATCTATCCATGAATAACTACACCTTGACTGCCATTATTTTTTCATCCGAAACCCTAGTAGTTATGAAACTTGAGGAGTTAAAAATTGCAGGTGATAATTTGCATGTTGATCTTCCATCACTCAAAATCCTACATTTGAAATTTGTTGGTTTTGAAAATCGTAGTGTTCTAAAAAAACTTCTCAATGCTTGTCCTGTTCTAGAAGATTTGAACACCTTTCGTATTGTCTATCTGAAAGATGACAAAAATAATACAACAGAAGGGTTTAAACCCTTATCCAAGTGTGTTAGAGCAGATATCGATTCAAGTCATGTTCCATTTGATTGGCTTACCAATTTATCCAAGGATTGGCAATGTCCAATTTTGGATCTTGAATGTGTTTTGTCTCATCTCAGATCTTGTATTATTTATAACTTTGAAGGCTCAGAAGAGGATCTTCAATTTGCAACCTATATTCTGCGGAATGCAAGGCTTTTACAAGTCATGTCAATTTATGTTCCTAATAATTCCTTCAAGCATCTAATTGTAGAAGAAATATCATCCTGTCCAAGGATTTCTACGGCGTGTAAACTTTATGTTGATCGATCGAGATGCTAG
Protein sequence

>MsG0580028083.01.T01

MSPNKKRMAQSSEDPKMDRISDLPTELLCHILSLLPIRQAFTTTVLSKQWTQLSYSPTNLNFDYETFAKDDEPFHRFCCFVNTVMLSHHSSSQPIKTFSLNCGGSSFSDSDQHLFDAWVEAPKRRCAEEFHLSMNNYTLTAIIFSSETLVVMKLEELKIAGDNLHVDLPSLKILHLKFVGFENRSVLKKLLNACPVLEDLNTFRIVYLKDDKNNTTEGFKPLSKCVRADIDSSHVPFDWLTNLSKDWQCPILDLECVLSHLRSCIIYNFEGSEEDLQFATYILRNARLLQVMSIYVPNNSFKHLIVEEISSCPRISTACKLYVDRSRC*