AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019781.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019781.01.T01 MTR_4g039440 80.145 413 75 2 2 407 5 417 0.0 634
MsG0480019781.01.T01 MTR_6g011460 61.314 411 139 7 3 406 28 425 5.46e-160 457
MsG0480019781.01.T01 MTR_1g085120 61.675 394 139 6 18 404 85 473 7.28e-154 443
MsG0480019781.01.T01 MTR_1g085120 61.675 394 139 6 18 404 160 548 2.94e-153 444
MsG0480019781.01.T01 MTR_7g055943 56.429 420 159 11 1 405 14 424 6.68e-139 404
MsG0480019781.01.T01 MTR_6g022360 53.957 417 160 9 2 401 6 407 4.41e-126 370
MsG0480019781.01.T01 MTR_6g022500 51.546 388 174 5 22 403 98 477 2.21e-120 358
MsG0480019781.01.T01 MTR_6g022520 61.420 324 117 5 86 407 1 318 3.86e-120 352
MsG0480019781.01.T01 MTR_1g085120 60.201 299 111 4 18 310 172 468 1.71e-109 330
MsG0480019781.01.T01 MTR_1g066830 48.985 394 171 12 24 401 7 386 2.56e-103 311
MsG0480019781.01.T01 MTR_5g058100 50.633 395 165 13 24 404 8 386 2.66e-102 308
MsG0480019781.01.T01 MTR_1089s0010 49.492 394 177 12 19 404 2 381 1.13e-101 307
MsG0480019781.01.T01 MTR_5g073420 47.208 394 179 12 24 407 10 384 3.05e-99 301
MsG0480019781.01.T01 MTR_6g044572 46.283 417 159 12 24 403 1 389 1.83e-97 296
MsG0480019781.01.T01 MTR_6g044560 46.283 417 159 12 24 403 177 565 3.30e-95 296
MsG0480019781.01.T01 MTR_5g058000 48.969 388 168 13 24 401 7 374 2.38e-94 288
MsG0480019781.01.T01 MTR_6g040270 48.825 383 178 10 27 402 10 381 4.34e-93 285
MsG0480019781.01.T01 MTR_1g108820 40.816 392 203 13 24 400 7 384 2.63e-69 224
MsG0480019781.01.T01 MTR_7g026500 39.055 402 199 14 25 401 14 394 2.05e-65 214
MsG0480019781.01.T01 MTR_5g061680 41.284 327 151 10 16 335 2 294 1.72e-61 202
MsG0480019781.01.T01 MTR_5g045170 38.250 400 217 12 17 401 6 390 2.82e-61 203
MsG0480019781.01.T01 MTR_0009s0080 37.360 356 200 9 27 367 20 367 1.91e-60 202
MsG0480019781.01.T01 MTR_6g045333 35.768 397 225 11 24 401 60 445 6.77e-59 198
MsG0480019781.01.T01 MTR_5g045510 35.949 395 210 11 24 405 11 375 1.35e-56 190
MsG0480019781.01.T01 MTR_5g007410 35.990 389 212 14 27 394 28 400 1.84e-54 187
MsG0480019781.01.T01 MTR_3g071850 34.684 395 226 12 24 398 23 405 3.81e-52 187
MsG0480019781.01.T01 MTR_5g076150 50.000 222 89 6 128 332 11 227 7.07e-52 174
MsG0480019781.01.T01 MTR_3g095600 47.083 240 89 5 24 254 3 213 7.59e-51 173
MsG0480019781.01.T01 MTR_5g073370 34.750 400 223 15 25 406 5 384 4.35e-50 174
MsG0480019781.01.T01 MTR_1g108800 37.076 383 186 12 24 400 7 340 1.53e-48 168
MsG0480019781.01.T01 MTR_3g108560 31.620 389 234 9 25 401 20 388 2.64e-48 169
MsG0480019781.01.T01 MTR_7g056287 37.028 397 204 20 25 402 3 372 1.24e-47 167
MsG0480019781.01.T01 MTR_2g036470 34.264 394 232 13 22 399 11 393 1.62e-47 167
MsG0480019781.01.T01 MTR_7g056277 36.471 425 219 21 2 402 231 628 1.97e-47 171
MsG0480019781.01.T01 MTR_1g108820 38.636 308 164 10 24 316 7 304 6.23e-47 164
MsG0480019781.01.T01 MTR_5g039470 35.629 334 197 11 41 363 1 327 1.19e-45 160
MsG0480019781.01.T01 MTR_5g039450 33.850 387 209 14 24 399 5 355 1.93e-45 160
MsG0480019781.01.T01 MTR_1g041245 33.671 395 228 12 24 402 10 386 2.37e-45 161
MsG0480019781.01.T01 MTR_3g107100 33.333 417 232 13 12 402 2 398 1.20e-44 160
MsG0480019781.01.T01 MTR_5g039490 32.289 415 227 13 1 401 1 375 7.86e-44 157
MsG0480019781.01.T01 MTR_7g056433 33.503 394 230 12 25 402 12 389 6.89e-42 152
MsG0480019781.01.T01 MTR_7g098510 33.077 390 235 11 24 402 17 391 9.58e-42 151
MsG0480019781.01.T01 MTR_3g095630 49.704 169 79 3 224 392 13 175 3.92e-41 144
MsG0480019781.01.T01 MTR_5g033200 51.462 171 77 4 227 396 11 176 4.92e-41 144
MsG0480019781.01.T01 MTR_5g073340 34.146 328 167 12 24 336 7 300 5.01e-41 147
MsG0480019781.01.T01 MTR_0543s0010 31.701 388 230 11 25 401 86 449 8.77e-41 150
MsG0480019781.01.T01 MTR_5g063950 31.043 393 202 12 30 399 13 359 9.47e-41 148
MsG0480019781.01.T01 MTR_5g031970 33.594 384 202 13 24 399 15 353 9.53e-41 148
MsG0480019781.01.T01 MTR_2g007450 33.028 436 212 18 24 406 15 423 1.27e-40 149
MsG0480019781.01.T01 MTR_6g033095 43.318 217 60 3 152 368 32 185 1.45e-40 143
MsG0480019781.01.T01 MTR_3g099830 32.187 407 201 13 24 400 11 372 5.57e-40 146
MsG0480019781.01.T01 MTR_2g007400 32.289 415 219 16 24 400 11 401 6.13e-40 147
MsG0480019781.01.T01 MTR_7g033915 30.789 393 219 13 24 401 10 364 1.70e-39 145
MsG0480019781.01.T01 MTR_7g075820 32.771 415 212 18 25 400 6 392 1.93e-39 145
MsG0480019781.01.T01 MTR_7g007080 32.170 401 220 14 25 400 4 377 5.04e-39 144
MsG0480019781.01.T01 MTR_0492s0020 32.670 352 208 9 25 367 86 417 6.33e-39 145
MsG0480019781.01.T01 MTR_7g083740 31.421 401 209 12 24 405 16 369 6.75e-39 143
MsG0480019781.01.T01 MTR_3g108150 30.769 390 241 11 25 401 13 386 1.14e-38 143
MsG0480019781.01.T01 MTR_2g005990 31.719 413 222 13 24 400 5 393 2.66e-38 142
MsG0480019781.01.T01 MTR_2g008310 32.152 395 228 13 24 402 1 371 5.34e-38 142
MsG0480019781.01.T01 MTR_3g095640 51.829 164 67 5 19 170 12 175 6.41e-38 135
MsG0480019781.01.T01 MTR_1g053025 31.358 405 230 15 24 399 1 386 6.49e-38 141
MsG0480019781.01.T01 MTR_3g023630 32.170 401 222 14 16 399 4 371 6.68e-38 141
MsG0480019781.01.T01 MTR_7g088260 31.458 391 236 12 25 402 91 462 6.91e-38 142
MsG0480019781.01.T01 MTR_7g115270 30.576 399 242 12 25 399 12 399 1.58e-37 140
MsG0480019781.01.T01 MTR_5g054920 42.703 185 87 5 192 369 7 179 3.27e-37 134
MsG0480019781.01.T01 MTR_3g107160 33.420 383 211 16 25 382 10 373 4.97e-37 139
MsG0480019781.01.T01 MTR_3g036250 33.501 397 206 15 24 399 4 363 8.15e-37 137
MsG0480019781.01.T01 MTR_5g058350 43.655 197 85 5 23 217 6 178 1.05e-35 129
MsG0480019781.01.T01 MTR_5g065100 30.749 387 202 12 30 401 13 348 1.13e-35 136
MsG0480019781.01.T01 MTR_7g098570 33.075 387 229 14 24 397 19 388 3.17e-35 135
MsG0480019781.01.T01 MTR_5g083890 33.174 419 214 21 25 399 6 402 3.37e-35 136
MsG0480019781.01.T01 MTR_7g033990 28.607 402 258 9 17 406 3 387 4.62e-35 134
MsG0480019781.01.T01 MTR_2g008320 31.296 409 219 17 24 402 51 427 5.52e-35 134
MsG0480019781.01.T01 MTR_5g008950 30.151 398 227 12 27 404 1 367 6.51e-35 133
MsG0480019781.01.T01 MTR_5g008920 31.969 391 238 12 24 404 11 383 1.44e-34 132
MsG0480019781.01.T01 MTR_7g032380 30.534 393 213 14 24 402 10 356 1.51e-34 131
MsG0480019781.01.T01 MTR_7g098480 33.673 392 226 15 24 401 17 388 2.69e-34 133
MsG0480019781.01.T01 MTR_3g105060 29.381 388 238 12 24 402 13 373 4.02e-34 130
MsG0480019781.01.T01 MTR_3g108560 31.633 294 177 6 25 310 20 297 4.84e-34 129
MsG0480019781.01.T01 MTR_3g082890 31.116 421 249 14 10 402 77 484 1.65e-33 131
MsG0480019781.01.T01 MTR_3g087260 34.035 285 164 9 127 401 186 456 2.86e-33 130
MsG0480019781.01.T01 MTR_1377s0010 50.725 138 64 2 241 378 5 138 3.41e-33 121
MsG0480019781.01.T01 MTR_2g007360 31.144 411 200 14 24 400 11 372 6.75e-33 127
MsG0480019781.01.T01 MTR_3g107120 32.632 380 201 14 25 370 9 367 8.27e-33 127
MsG0480019781.01.T01 MTR_7g007340 33.056 360 183 15 24 367 12 329 9.90e-33 127
MsG0480019781.01.T01 MTR_7g114710 31.514 403 202 14 24 402 12 364 1.25e-32 126
MsG0480019781.01.T01 MTR_1g107385 31.429 420 226 16 19 400 26 421 2.99e-32 126
MsG0480019781.01.T01 MTR_3g467400 28.993 407 222 13 23 402 1 367 6.06e-32 124
MsG0480019781.01.T01 MTR_7g034120 32.432 333 186 12 86 403 1 309 1.40e-31 122
MsG0480019781.01.T01 MTR_3g040700 31.421 366 209 13 8 359 29 366 1.43e-31 125
MsG0480019781.01.T01 MTR_7g034115 30.541 370 217 13 17 367 3 351 1.76e-31 124
MsG0480019781.01.T01 MTR_3g026920 30.000 430 208 17 21 399 15 402 5.25e-30 120
MsG0480019781.01.T01 MTR_7g032370 30.526 380 221 15 37 402 2 352 5.38e-30 119
MsG0480019781.01.T01 MTR_3g082890 29.258 458 246 15 5 402 2 441 1.95e-29 119
MsG0480019781.01.T01 MTR_6g022390 47.917 144 56 6 24 150 4 145 5.64e-29 110
MsG0480019781.01.T01 MTR_1g059860 30.345 290 154 8 108 359 31 310 9.99e-29 115
MsG0480019781.01.T01 MTR_7g056430 30.311 386 216 13 25 394 9 357 2.36e-28 118
MsG0480019781.01.T01 MTR_7g056420 30.311 386 216 13 25 394 9 357 2.39e-28 118
MsG0480019781.01.T01 MTR_2g007500 31.487 343 186 13 24 342 13 330 6.22e-28 113
MsG0480019781.01.T01 MTR_7g007370 28.571 399 205 16 7 390 2 335 1.12e-27 112
MsG0480019781.01.T01 MTR_3g109982 31.944 288 161 11 132 401 211 481 3.78e-27 114
MsG0480019781.01.T01 MTR_3g109982 40.000 185 103 4 25 205 13 193 6.09e-25 107
MsG0480019781.01.T01 MTR_4g098590 30.352 369 214 13 27 367 1 354 1.78e-26 109
MsG0480019781.01.T01 MTR_7g060470 30.749 374 211 13 25 367 3 359 2.53e-26 109
MsG0480019781.01.T01 MTR_7g056020 28.974 390 222 13 25 396 16 368 4.21e-26 110
MsG0480019781.01.T01 MTR_3g110010 40.000 185 103 4 25 205 13 193 8.68e-25 107
MsG0480019781.01.T01 MTR_3g110010 35.349 215 106 9 132 330 211 408 2.58e-18 87.8
MsG0480019781.01.T01 MTR_5g012840 28.686 373 190 13 44 402 8 318 5.10e-24 101
MsG0480019781.01.T01 MTR_3g071790 31.746 189 115 4 179 359 18 200 2.14e-22 94.7
MsG0480019781.01.T01 MTR_7g034110 28.280 343 175 11 24 352 10 295 2.46e-21 94.7
MsG0480019781.01.T01 MTR_5g024060 36.667 180 97 4 223 394 30 200 1.19e-20 90.9
MsG0480019781.01.T01 MTR_6g022410 51.064 94 42 2 310 402 17 107 2.01e-20 86.3
MsG0480019781.01.T01 MTR_5g061410 27.740 292 166 8 30 310 10 267 2.11e-20 90.5
MsG0480019781.01.T01 MTR_4g080610 26.817 399 212 16 27 401 14 356 4.23e-20 91.3
MsG0480019781.01.T01 MTR_4g056030 27.384 409 225 17 25 367 9 411 1.57e-19 90.5
MsG0480019781.01.T01 MTR_8g467800 26.490 453 255 16 18 403 13 454 1.66e-19 90.5
MsG0480019781.01.T01 MTR_8g062310 25.571 438 280 16 1 402 1 428 2.99e-19 89.7
MsG0480019781.01.T01 MTR_7g022105 29.086 361 224 12 24 367 48 393 3.13e-19 89.4
MsG0480019781.01.T01 MTR_5g084070 27.619 420 243 14 24 394 12 419 7.27e-19 88.6
MsG0480019781.01.T01 MTR_0571s0010 54.321 81 32 2 25 100 32 112 1.55e-18 81.3
MsG0480019781.01.T01 MTR_7g075800 27.512 418 222 18 25 380 9 407 2.04e-18 87.8
MsG0480019781.01.T01 MTR_8g085430 33.010 206 120 9 16 206 1 203 8.62e-18 84.3
MsG0480019781.01.T01 MTR_4g056020 26.812 414 221 18 25 367 9 411 9.95e-18 85.1
MsG0480019781.01.T01 MTR_8g070950 27.740 447 227 23 25 402 15 434 2.21e-17 84.0
MsG0480019781.01.T01 MTR_7g021990 28.338 367 219 14 24 367 47 392 3.61e-17 83.2
MsG0480019781.01.T01 MTR_7g056447 34.807 181 108 5 25 199 9 185 3.98e-17 81.6
MsG0480019781.01.T01 MTR_4g056040 24.943 437 230 18 25 367 9 441 5.02e-17 83.2
MsG0480019781.01.T01 MTR_7g021950 28.338 367 219 14 24 367 47 392 7.63e-17 82.8
MsG0480019781.01.T01 MTR_2g007090 31.276 243 127 8 165 401 85 293 5.18e-16 78.6
MsG0480019781.01.T01 MTR_5g080710 26.464 427 246 15 24 394 32 446 6.73e-16 79.7
MsG0480019781.01.T01 MTR_4g055580 25.390 449 219 20 25 367 100 538 1.09e-15 79.3
MsG0480019781.01.T01 MTR_8g062080 25.734 443 246 20 24 402 22 445 1.13e-15 79.0
MsG0480019781.01.T01 MTR_4g055990 25.721 451 221 19 25 367 9 453 1.33e-15 79.0
MsG0480019781.01.T01 MTR_4g055990 25.721 451 221 19 25 367 9 453 1.36e-15 79.0
MsG0480019781.01.T01 MTR_8g467800 33.333 195 119 4 18 203 13 205 1.98e-15 77.4
MsG0480019781.01.T01 MTR_7g033945 33.735 166 96 4 24 178 10 172 2.34e-15 74.3
MsG0480019781.01.T01 MTR_3g115430 32.308 130 78 4 278 402 1 125 6.14e-14 68.6
MsG0480019781.01.T01 MTR_4g093690 33.158 190 106 9 25 200 18 200 9.23e-14 71.6
MsG0480019781.01.T01 MTR_3g114200 33.540 161 93 5 5 158 2 155 9.72e-14 68.9
MsG0480019781.01.T01 MTR_1g090900 34.091 176 93 7 25 187 11 176 1.23e-13 69.7
MsG0480019781.01.T01 MTR_8g468810 25.364 481 262 18 1 402 1 463 1.42e-13 72.4
MsG0480019781.01.T01 MTR_6g029350 30.837 227 120 10 192 407 3 203 1.58e-13 70.1
MsG0480019781.01.T01 MTR_1g492880 46.154 91 45 1 25 111 6 96 2.53e-13 65.9
MsG0480019781.01.T01 MTR_2g047858 27.005 374 191 17 2 344 94 416 3.36e-13 71.6
MsG0480019781.01.T01 MTR_1g492880 46.154 91 45 1 25 111 6 96 3.38e-13 65.9
MsG0480019781.01.T01 MTR_1g038710 25.845 414 231 16 25 367 19 427 7.13e-13 70.5
MsG0480019781.01.T01 MTR_5g073400 43.478 92 50 2 113 203 22 112 1.06e-12 65.5
MsG0480019781.01.T01 MTR_4g134150 31.658 199 122 7 25 217 14 204 1.11e-12 67.8
MsG0480019781.01.T01 MTR_7g033940 37.615 109 64 2 22 128 91 197 1.73e-12 67.0
MsG0480019781.01.T01 MTR_8g062270 24.779 452 253 17 24 401 15 453 2.01e-12 68.9
MsG0480019781.01.T01 MTR_1g090883 32.161 199 106 9 25 205 19 206 2.04e-12 68.6
MsG0480019781.01.T01 MTR_2g020180 36.170 141 67 7 269 402 91 215 8.51e-12 64.7
MsG0480019781.01.T01 MTR_8g468910 31.443 194 117 7 2 182 24 214 8.66e-12 66.6
MsG0480019781.01.T01 MTR_7g081290 34.507 142 77 5 269 402 123 256 1.78e-11 64.3
MsG0480019781.01.T01 MTR_7g098590 49.315 73 35 1 24 94 17 89 2.13e-11 61.6
MsG0480019781.01.T01 MTR_2g007550 29.231 195 102 5 224 399 155 332 3.05e-11 64.7
MsG0480019781.01.T01 MTR_8g058965 28.910 211 123 7 19 203 7 216 4.95e-11 64.7
MsG0480019781.01.T01 MTR_5g087940 34.831 178 102 7 10 182 11 179 6.32e-11 63.9
MsG0480019781.01.T01 MTR_1g013580 23.671 414 261 14 23 388 17 423 9.11e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019781.01.T01 AT5G56420 25.986 431 260 13 21 402 2 422 9.11e-26 108
MsG0480019781.01.T01 AT5G56420 25.986 431 260 13 21 402 2 422 9.11e-26 108
MsG0480019781.01.T01 AT5G56420 25.986 431 260 13 21 402 2 422 9.11e-26 108
MsG0480019781.01.T01 AT4G00160 28.798 441 247 16 25 407 16 447 1.24e-24 105
MsG0480019781.01.T01 AT1G06630 26.448 397 223 13 25 363 21 406 1.90e-22 99.0
MsG0480019781.01.T01 AT1G06630 26.448 397 223 13 25 363 12 397 1.93e-22 98.6
MsG0480019781.01.T01 AT1G06630 26.448 397 223 13 25 363 12 397 1.93e-22 98.6
MsG0480019781.01.T01 AT1G06630 26.448 397 223 13 25 363 12 397 1.93e-22 98.6
MsG0480019781.01.T01 AT1G06630 26.448 397 223 13 25 363 12 397 1.93e-22 98.6
MsG0480019781.01.T01 AT1G06630 28.280 343 186 11 25 309 12 352 4.79e-22 97.1
MsG0480019781.01.T01 AT1G06630 28.280 343 186 11 25 309 12 352 4.79e-22 97.1
MsG0480019781.01.T01 AT1G06630 28.280 343 186 11 25 309 12 352 2.71e-21 95.9
MsG0480019781.01.T01 AT4G26340 25.986 431 255 14 24 402 1 419 3.51e-21 95.1
MsG0480019781.01.T01 AT4G15060 31.939 263 158 7 4 255 5 257 4.23e-21 95.1
MsG0480019781.01.T01 AT3G52680 28.929 439 247 18 25 407 21 450 1.08e-20 94.0
MsG0480019781.01.T01 AT2G29930 25.758 462 253 15 20 401 7 458 2.49e-20 93.2
MsG0480019781.01.T01 AT2G29930 25.758 462 253 15 20 401 7 458 2.49e-20 93.2
MsG0480019781.01.T01 AT4G15060 32.510 243 143 7 24 255 171 403 1.60e-19 90.9
MsG0480019781.01.T01 AT5G56400 27.314 443 239 14 24 402 32 455 5.44e-19 89.0
MsG0480019781.01.T01 AT3G59190 34.673 199 99 8 25 201 12 201 1.95e-18 86.7
MsG0480019781.01.T01 AT3G59190 34.673 199 99 8 25 201 12 201 2.52e-18 87.4
MsG0480019781.01.T01 AT5G38590 26.128 421 234 12 24 387 1 401 2.60e-18 86.7
MsG0480019781.01.T01 AT4G14103 28.451 355 177 13 25 309 8 355 5.44e-18 85.9
MsG0480019781.01.T01 AT2G42730 24.396 455 267 13 21 402 1 451 5.49e-18 85.9
MsG0480019781.01.T01 AT4G14103 28.451 355 177 13 25 309 8 355 8.08e-18 85.1
MsG0480019781.01.T01 AT4G14103 28.451 355 177 13 25 309 8 355 8.08e-18 85.1
MsG0480019781.01.T01 AT4G13965 26.603 421 255 13 24 399 9 420 1.33e-17 84.7
MsG0480019781.01.T01 AT4G22280 25.346 434 250 14 24 403 1 414 1.63e-17 84.3
MsG0480019781.01.T01 AT4G22280 27.353 340 184 10 24 309 1 331 1.87e-17 83.2
MsG0480019781.01.T01 AT3G60040 24.434 442 250 13 25 393 230 660 3.60e-17 84.0
MsG0480019781.01.T01 AT3G60040 24.434 442 250 13 25 393 232 662 3.85e-17 84.0
MsG0480019781.01.T01 AT3G60040 24.887 442 248 14 25 393 233 663 3.98e-17 84.0
MsG0480019781.01.T01 AT3G60040 24.434 442 250 13 25 393 13 443 4.35e-17 84.0
MsG0480019781.01.T01 AT3G49030 25.435 460 247 16 15 401 4 440 5.07e-17 83.2
MsG0480019781.01.T01 AT3G60040 24.887 442 248 14 25 393 232 662 5.40e-17 83.6
MsG0480019781.01.T01 AT5G38590 33.679 193 104 6 24 203 1 182 6.56e-17 80.9
MsG0480019781.01.T01 AT1G55660 31.020 245 151 6 22 256 50 286 7.62e-17 82.0
MsG0480019781.01.T01 AT2G04230 26.768 396 229 11 25 363 13 404 8.96e-17 82.4
MsG0480019781.01.T01 AT4G00315 29.461 241 154 6 24 255 1 234 1.37e-16 81.6
MsG0480019781.01.T01 AT1G55660 31.020 245 151 6 22 256 50 286 1.50e-16 81.6
MsG0480019781.01.T01 AT1G06630 34.031 191 112 5 25 201 12 202 2.35e-16 79.7
MsG0480019781.01.T01 AT3G59200 26.292 445 216 20 21 367 1 431 4.58e-16 80.5
MsG0480019781.01.T01 AT5G53840 31.325 249 152 9 25 269 18 251 6.74e-16 79.7
MsG0480019781.01.T01 AT5G56690 32.353 204 117 7 27 219 4 197 7.30e-16 79.3
MsG0480019781.01.T01 AT5G60610 33.333 192 105 7 24 204 1 180 8.80e-16 79.0
MsG0480019781.01.T01 AT5G60610 33.333 192 105 7 24 204 1 180 8.80e-16 79.0
MsG0480019781.01.T01 AT3G56780 31.694 183 113 6 27 203 9 185 1.17e-15 79.0
MsG0480019781.01.T01 AT3G52680 30.395 329 173 14 25 306 21 340 1.17e-15 78.2
MsG0480019781.01.T01 AT3G56780 31.694 183 113 6 27 203 9 185 1.36e-15 79.0
MsG0480019781.01.T01 AT5G56560 24.528 424 262 13 26 402 6 418 1.46e-15 78.6
MsG0480019781.01.T01 AT3G56780 31.694 183 113 6 27 203 9 185 1.55e-15 78.2
MsG0480019781.01.T01 AT3G58860 26.741 359 188 13 24 318 6 353 1.60e-15 78.6
MsG0480019781.01.T01 AT5G56440 24.276 449 249 18 24 401 1 429 1.90e-15 78.2
MsG0480019781.01.T01 AT3G59240 24.714 437 225 19 19 365 2 424 1.91e-15 78.6
MsG0480019781.01.T01 AT4G27050 24.946 461 250 18 25 401 4 452 2.35e-15 78.2
MsG0480019781.01.T01 AT4G27050 24.946 461 250 18 25 401 4 452 2.35e-15 78.2
MsG0480019781.01.T01 AT4G27050 24.946 461 250 18 25 401 4 452 2.35e-15 78.2
MsG0480019781.01.T01 AT4G27050 24.946 461 250 18 25 401 4 452 2.35e-15 78.2
MsG0480019781.01.T01 AT4G27050 24.946 461 250 18 25 401 4 452 2.35e-15 78.2
MsG0480019781.01.T01 AT5G38570 26.485 404 242 13 24 401 1 375 2.40e-15 77.4
MsG0480019781.01.T01 AT5G53635 32.418 182 116 4 27 203 2 181 2.92e-15 77.4
MsG0480019781.01.T01 AT3G59160 25.255 392 194 14 25 319 13 402 3.00e-15 77.8
MsG0480019781.01.T01 AT3G42770 34.197 193 103 5 30 203 4 191 3.11e-15 77.8
MsG0480019781.01.T01 AT5G22670 29.167 216 135 6 25 235 11 213 3.29e-15 77.4
MsG0480019781.01.T01 AT3G49150 32.663 199 109 8 25 206 16 206 3.73e-15 77.4
MsG0480019781.01.T01 AT5G35995 25.561 446 226 19 25 378 5 436 4.54e-15 77.0
MsG0480019781.01.T01 AT5G35995 25.561 446 226 19 25 378 5 436 4.54e-15 77.0
MsG0480019781.01.T01 AT5G22660 31.858 226 136 7 25 245 13 225 8.63e-15 75.1
MsG0480019781.01.T01 AT3G03040 25.275 455 238 16 24 387 1 444 1.12e-14 75.9
MsG0480019781.01.T01 AT4G14096 26.265 415 224 16 25 365 8 414 1.16e-14 75.9
MsG0480019781.01.T01 AT4G14096 26.265 415 224 16 25 365 8 414 1.16e-14 75.9
MsG0480019781.01.T01 AT1G48400 31.553 206 100 8 25 205 10 199 1.18e-14 75.9
MsG0480019781.01.T01 AT2G26860 32.530 249 146 8 24 260 1 239 1.28e-14 75.5
MsG0480019781.01.T01 AT2G26860 32.530 249 146 8 24 260 1 239 1.28e-14 75.5
MsG0480019781.01.T01 AT1G48400 31.553 206 100 8 25 205 10 199 1.31e-14 75.9
MsG0480019781.01.T01 AT5G38392 33.488 215 95 10 24 206 1 199 1.39e-14 72.8
MsG0480019781.01.T01 AT5G22660 31.858 226 136 7 25 245 13 225 1.82e-14 75.1
MsG0480019781.01.T01 AT5G53640 30.220 182 119 5 25 203 22 198 2.16e-14 72.4
MsG0480019781.01.T01 AT3G59000 26.579 380 183 12 24 318 1 369 2.30e-14 75.1
MsG0480019781.01.T01 AT3G59200 26.471 374 180 15 21 309 1 364 2.43e-14 74.3
MsG0480019781.01.T01 AT3G50710 24.194 434 261 13 24 399 1 424 2.71e-14 74.7
MsG0480019781.01.T01 AT3G59170 26.302 384 177 15 25 306 7 386 2.71e-14 74.7
MsG0480019781.01.T01 AT4G10400 25.400 437 238 13 24 401 1 408 3.65e-14 73.9
MsG0480019781.01.T01 AT4G10400 25.400 437 238 13 24 401 1 408 3.65e-14 73.9
MsG0480019781.01.T01 AT4G10400 25.400 437 238 13 24 401 1 408 3.65e-14 73.9
MsG0480019781.01.T01 AT5G56380 25.714 455 244 19 24 401 1 438 3.71e-14 74.3
MsG0480019781.01.T01 AT5G56380 25.714 455 244 19 24 401 1 438 3.71e-14 74.3
MsG0480019781.01.T01 AT2G42720 24.295 461 250 17 24 403 1 443 4.58e-14 73.9
MsG0480019781.01.T01 AT3G58880 25.876 371 192 12 23 319 1 362 6.62e-14 73.6
MsG0480019781.01.T01 AT5G22700 29.921 254 144 9 15 256 33 264 6.90e-14 73.6
MsG0480019781.01.T01 AT1G32375 23.059 438 262 15 24 402 1 422 7.32e-14 73.2
MsG0480019781.01.T01 AT1G32375 23.059 438 262 15 24 402 1 422 7.32e-14 73.2
MsG0480019781.01.T01 AT5G22610 26.027 438 251 20 19 399 12 433 8.10e-14 73.2
MsG0480019781.01.T01 AT5G22700 29.921 254 144 9 15 256 33 264 8.36e-14 73.2
MsG0480019781.01.T01 AT5G41830 26.279 430 204 20 25 351 13 432 9.12e-14 73.2
MsG0480019781.01.T01 AT5G22700 29.960 247 139 9 22 256 3 227 1.00e-13 72.8
MsG0480019781.01.T01 AT5G22700 29.960 247 139 9 22 256 3 227 1.00e-13 72.8
MsG0480019781.01.T01 AT5G22700 29.960 247 139 9 22 256 3 227 1.00e-13 72.8
MsG0480019781.01.T01 AT5G22700 29.960 247 139 9 22 256 3 227 1.00e-13 72.8
MsG0480019781.01.T01 AT4G00320 26.630 368 174 17 25 306 13 370 1.20e-13 72.8
MsG0480019781.01.T01 AT5G22720 31.132 212 128 7 25 228 23 224 1.74e-13 72.4
MsG0480019781.01.T01 AT3G59210 33.168 202 113 7 25 210 7 202 2.65e-13 71.6
MsG0480019781.01.T01 AT3G59210 33.168 202 113 7 25 210 7 202 2.65e-13 71.6
MsG0480019781.01.T01 AT3G59210 33.168 202 113 7 25 210 7 202 2.65e-13 71.6
MsG0480019781.01.T01 AT3G59210 33.168 202 113 7 25 210 7 202 2.65e-13 71.6
MsG0480019781.01.T01 AT3G59210 33.168 202 113 7 25 210 7 202 2.65e-13 71.6
MsG0480019781.01.T01 AT5G56370 24.711 433 258 15 24 401 1 420 3.12e-13 71.2
MsG0480019781.01.T01 AT5G56370 24.711 433 258 15 24 401 1 420 3.12e-13 71.2
MsG0480019781.01.T01 AT5G44490 30.612 196 108 10 25 203 17 201 3.64e-13 71.2
MsG0480019781.01.T01 AT5G44490 30.612 196 108 10 25 203 17 201 3.85e-13 71.2
MsG0480019781.01.T01 AT1G64540 34.595 185 102 8 27 205 7 178 5.23e-13 70.9
MsG0480019781.01.T01 AT1G64540 34.595 185 102 8 27 205 7 178 5.23e-13 70.9
MsG0480019781.01.T01 AT5G22610 30.357 224 135 10 19 226 12 230 5.79e-13 70.9
MsG0480019781.01.T01 AT3G58940 26.558 369 175 17 24 318 1 347 7.67e-13 70.5
MsG0480019781.01.T01 AT3G58940 26.558 369 175 17 24 318 1 347 7.67e-13 70.5
MsG0480019781.01.T01 AT5G44940 24.181 397 252 13 25 399 5 374 7.97e-13 69.7
MsG0480019781.01.T01 AT4G09920 33.333 192 116 5 24 207 1 188 1.31e-12 68.6
MsG0480019781.01.T01 AT4G09920 33.333 192 116 5 24 207 1 188 1.31e-12 68.6
MsG0480019781.01.T01 AT4G09920 33.333 192 116 5 24 207 1 188 1.31e-12 68.6
MsG0480019781.01.T01 AT3G58920 24.000 475 260 17 24 403 1 469 1.35e-12 69.7
MsG0480019781.01.T01 AT3G58930 23.907 389 191 13 24 318 1 378 1.67e-12 69.3
MsG0480019781.01.T01 AT3G58930 23.907 389 191 13 24 318 1 378 1.67e-12 69.3
MsG0480019781.01.T01 AT3G58930 23.907 389 191 13 24 318 1 378 1.67e-12 69.3
MsG0480019781.01.T01 AT3G58980 21.882 457 258 16 24 399 1 439 1.87e-12 69.3
MsG0480019781.01.T01 AT4G09920 32.487 197 111 5 24 207 1 188 2.43e-12 67.8
MsG0480019781.01.T01 AT4G09920 32.487 197 111 5 24 207 1 188 2.43e-12 67.8
MsG0480019781.01.T01 AT3G62430 25.843 356 180 14 24 309 1 342 2.53e-12 68.6
MsG0480019781.01.T01 AT3G26922 33.152 184 115 4 25 203 14 194 3.06e-12 67.4
MsG0480019781.01.T01 AT3G26922 33.152 184 115 4 25 203 14 194 3.06e-12 67.4
MsG0480019781.01.T01 AT3G49020 26.457 446 246 20 21 402 18 445 3.56e-12 68.2
MsG0480019781.01.T01 AT5G41840 25.693 397 182 16 25 319 14 399 3.58e-12 68.6
MsG0480019781.01.T01 AT3G51530 24.719 445 251 18 25 404 30 455 4.27e-12 67.8
MsG0480019781.01.T01 AT3G62440 23.881 469 248 18 24 399 1 453 6.14e-12 67.4
MsG0480019781.01.T01 AT5G56370 26.687 326 183 12 24 306 1 313 1.07e-11 65.9
MsG0480019781.01.T01 AT3G49030 24.208 442 249 13 15 401 4 414 1.22e-11 66.2
MsG0480019781.01.T01 AT5G22730 27.113 284 180 9 25 293 28 299 1.30e-11 66.2
MsG0480019781.01.T01 AT1G78750 28.497 193 123 6 24 203 17 207 1.36e-11 66.2
MsG0480019781.01.T01 AT1G78750 28.497 193 123 6 24 203 17 207 1.36e-11 66.2
MsG0480019781.01.T01 AT5G22730 27.113 284 180 9 25 293 28 299 1.67e-11 66.2
MsG0480019781.01.T01 AT5G22730 27.113 284 180 9 25 293 28 299 1.67e-11 66.2
MsG0480019781.01.T01 AT5G38390 33.333 189 111 6 24 206 1 180 1.80e-11 65.9
MsG0480019781.01.T01 AT3G58900 31.683 202 116 6 24 209 1 196 2.18e-11 65.1
MsG0480019781.01.T01 AT3G58900 31.683 202 116 6 24 209 1 196 2.18e-11 65.1
MsG0480019781.01.T01 AT3G58900 31.683 202 116 6 24 209 1 196 2.58e-11 64.7
MsG0480019781.01.T01 AT1G21990 30.645 186 115 5 25 201 9 189 4.00e-11 65.1
MsG0480019781.01.T01 AT1G66290 26.667 225 144 8 2 214 6 221 4.26e-11 64.7
MsG0480019781.01.T01 AT2G26030 29.570 186 114 7 25 200 4 182 4.66e-11 64.7
MsG0480019781.01.T01 AT2G26030 29.570 186 114 7 25 200 4 182 4.66e-11 64.7
MsG0480019781.01.T01 AT2G26030 29.570 186 114 7 25 200 4 182 5.49e-11 64.3
MsG0480019781.01.T01 AT3G58900 31.683 202 116 6 24 209 1 196 6.70e-11 64.3
MsG0480019781.01.T01 AT5G38386 24.675 385 229 13 24 368 1 364 8.09e-11 63.9
MsG0480019781.01.T01 AT5G38386 24.675 385 229 13 24 368 1 364 8.09e-11 63.9

Find 70 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTGACATTGGCTAAAT+TGG 0.142411 4:+27040362 MsG0480019781.01.T01:CDS
GTCACTCAAAACCCTGAATT+TGG 0.161461 4:+27040197 MsG0480019781.01.T01:CDS
TCAAATGATGCTCTATTTAA+TGG 0.174361 4:+27040402 MsG0480019781.01.T01:CDS
AAGAAACATCTTCCAAATTC+AGG 0.200499 4:-27040209 None:intergenic
CTCCTCAAATGAAATACTTT+TGG 0.206726 4:+27040893 MsG0480019781.01.T01:CDS
CCTCAACTTGTAAATCTTCT+AGG 0.218492 4:-27040278 None:intergenic
AAACTTCAACGGTTAGATAT+TGG 0.255915 4:+27040147 MsG0480019781.01.T01:CDS
TCCTTTCCCAGGAAATCTTT+AGG 0.282615 4:+27040942 MsG0480019781.01.T01:CDS
GTTTAAGAACAACAAATGTT+TGG 0.320571 4:-27040128 None:intergenic
GAAACAGAGTTCTGCAGTTC+AGG 0.322790 4:+27039539 MsG0480019781.01.T01:CDS
TTTACATCCTAAAGATTTCC+TGG 0.324601 4:-27040949 None:intergenic
CGATCGCTCAATTCATTGTT+GGG 0.332264 4:+27040536 MsG0480019781.01.T01:CDS
GATGAAACACATTCAAGATT+TGG 0.334766 4:-27040750 None:intergenic
ATTTACAAGTTGAGGATATC+AGG 0.347288 4:+27040286 MsG0480019781.01.T01:CDS
TTTAGCCTCAACTGTTCCTT+TGG 0.349805 4:+27039979 MsG0480019781.01.T01:CDS
TTAAAATAGTACATGATCTA+AGG 0.354932 4:-27040776 None:intergenic
TTTAAGAACAACAAATGTTT+GGG 0.355661 4:-27040127 None:intergenic
CACATTCAAGATTTGGAGTT+GGG 0.367411 4:-27040743 None:intergenic
TTCCAAAAGTATTTCATTTG+AGG 0.375758 4:-27040895 None:intergenic
GTTTGGGAGATGAGAATAAT+GGG 0.383572 4:-27040111 None:intergenic
ATGTCCTCAAATCGGAGAAC+AGG 0.391999 4:-27039880 None:intergenic
GAATTTGGAGCTTGGGAGAA+TGG 0.393863 4:-27040581 None:intergenic
AGTTGGGTATTTCCATTCCT+TGG 0.401889 4:-27040727 None:intergenic
CAGGGAGTAAATAGCATAGT+TGG 0.402196 4:-27039861 None:intergenic
GCGATCGCTCAATTCATTGT+TGG 0.403461 4:+27040535 MsG0480019781.01.T01:CDS
ACTCCCTGTTCTCCGATTTG+AGG 0.407587 4:+27039876 MsG0480019781.01.T01:CDS
CTACATCTGTTCTTTCGAAA+AGG 0.423271 4:+27039833 MsG0480019781.01.T01:CDS
TGTTTGGGAGATGAGAATAA+TGG 0.429600 4:-27040112 None:intergenic
AGCCTCAACTGTTCCTTTGG+AGG 0.429902 4:+27039982 MsG0480019781.01.T01:CDS
GACGAAATTCAGATCATCAT+TGG 0.434411 4:-27039737 None:intergenic
AGAAACATCTTCCAAATTCA+GGG 0.436827 4:-27040208 None:intergenic
ATGTGCCGCAATAACTCATC+TGG 0.443887 4:-27039778 None:intergenic
TGATGAAAACAATGTATTAG+AGG 0.447862 4:+27040329 MsG0480019781.01.T01:CDS
GATGAGAATAATGGGCTTCA+AGG 0.459006 4:-27040103 None:intergenic
TAGTGAAAGCAATATTTGTT+GGG 0.473357 4:-27039813 None:intergenic
GTAGTGAAAGCAATATTTGT+TGG 0.480174 4:-27039814 None:intergenic
TGAAATAAGTTTGAAAACAC+TGG 0.484228 4:-27040495 None:intergenic
TTTCCATTCCTTGGACGAGC+AGG 0.487223 4:-27040718 None:intergenic
CCTAGAAGATTTACAAGTTG+AGG 0.491124 4:+27040278 MsG0480019781.01.T01:CDS
ACACATTCAAGATTTGGAGT+TGG 0.517487 4:-27040744 None:intergenic
TTACATCCTAAAGATTTCCT+GGG 0.523523 4:-27040948 None:intergenic
TCCTAAAGATTTCCTGGGAA+AGG 0.524319 4:-27040943 None:intergenic
AGTCGTTGATGTCCTCAAAT+CGG 0.525469 4:-27039888 None:intergenic
TAATGGGCTTCAAGGTGTGC+TGG 0.530449 4:-27040095 None:intergenic
AGGGAGTAAATAGCATAGTT+GGG 0.532413 4:-27039860 None:intergenic
GAAAACAATGTATTAGAGGG+AGG 0.541473 4:+27040333 MsG0480019781.01.T01:CDS
CAAAGGATATAGATTTAAAG+AGG 0.543414 4:+27040455 MsG0480019781.01.T01:CDS
AGACCTGCTCGTCCAAGGAA+TGG 0.547794 4:+27040715 MsG0480019781.01.T01:CDS
CACTGGAATAAATTCGAAAG+AGG 0.551511 4:-27040478 None:intergenic
TTGTTGTTCTTAAACTTCAA+CGG 0.554150 4:+27040136 MsG0480019781.01.T01:CDS
AGGGTTTAAATCCTTGACAT+TGG 0.556240 4:+27040353 MsG0480019781.01.T01:CDS
GATGAAGACCTGCTCGTCCA+AGG 0.558184 4:+27040710 MsG0480019781.01.T01:CDS
GATGAAAACAATGTATTAGA+GGG 0.560782 4:+27040330 MsG0480019781.01.T01:CDS
CACAAAACGACATCGTATTG+AGG 0.561287 4:+27040050 MsG0480019781.01.T01:CDS
ACTTGTAAATCTTCTAGGAT+AGG 0.568145 4:-27040273 None:intergenic
AAAACAATGTATTAGAGGGA+GGG 0.570710 4:+27040334 MsG0480019781.01.T01:CDS
CATCTGTTCTTTCGAAAAGG+TGG 0.572284 4:+27039836 MsG0480019781.01.T01:CDS
AACCAATTTAGCCAATGTCA+AGG 0.585877 4:-27040364 None:intergenic
TGGCTAAATTGGTTAGAGCA+AGG 0.591209 4:+27040373 MsG0480019781.01.T01:CDS
TAAAGATTTCCTGGGAAAGG+AGG 0.592204 4:-27040940 None:intergenic
TGACAATGCGACAAAAGCGA+TGG 0.592237 4:-27039912 None:intergenic
AAATTTCTACGCATAATCAA+AGG 0.597883 4:+27040438 MsG0480019781.01.T01:CDS
GACAATGCGACAAAAGCGAT+GGG 0.603116 4:-27039911 None:intergenic
TGTCCTCAAATCGGAGAACA+GGG 0.609889 4:-27039879 None:intergenic
TTGAGGATATCAGGATGCGA+AGG 0.628076 4:+27040295 MsG0480019781.01.T01:CDS
ATTTACCAGATGAGTTATTG+CGG 0.633191 4:+27039773 MsG0480019781.01.T01:CDS
AATGAAGGAACGATCATCCA+CGG 0.643579 4:+27039515 None:intergenic
TGCAGAACTCTGTTTCTCCG+TGG 0.656936 4:-27039532 None:intergenic
TTTGGAGCTTGGGAGAATGG+CGG 0.661471 4:-27040578 None:intergenic
GTCCTCCAAAGGAACAGTTG+AGG 0.706825 4:-27039984 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATTTATCAAAATATT+TGG - Chr4:27040670-27040689 None:intergenic 10.0%
!! AAATATATTATAGTAATGGT+AGG + Chr4:27039638-27039657 MsG0480019781.01.T01:intron 15.0%
!! AATCGAATCATAAAAAATAT+TGG - Chr4:27039597-27039616 None:intergenic 15.0%
!! ACCATTACTATAATATATTT+GGG - Chr4:27039638-27039657 None:intergenic 15.0%
!! TACCATTACTATAATATATT+TGG - Chr4:27039639-27039658 None:intergenic 15.0%
!!! ATTTTACAATACATGAAAAT+CGG + Chr4:27040858-27040877 MsG0480019781.01.T01:CDS 15.0%
!!! CCAAATTCTTTTTATTAAAA+AGG + Chr4:27040596-27040615 MsG0480019781.01.T01:CDS 15.0%
!!! CCTTTTTAATAAAAAGAATT+TGG - Chr4:27040599-27040618 None:intergenic 15.0%
!! ACCCAAATATATTATAGTAA+TGG + Chr4:27039634-27039653 MsG0480019781.01.T01:intron 20.0%
!! GTCCATTTAATATGAAAAAA+TGG + Chr4:27040019-27040038 MsG0480019781.01.T01:CDS 20.0%
!! TTAAAATAGTACATGATCTA+AGG - Chr4:27040779-27040798 None:intergenic 20.0%
!! TTTAAGAACAACAAATGTTT+GGG - Chr4:27040130-27040149 None:intergenic 20.0%
!!! AACAAAACTATTTTCTATTG+TGG + Chr4:27039704-27039723 MsG0480019781.01.T01:intron 20.0%
!!! AAGATGTTTCTTTTGAAAAT+TGG + Chr4:27040220-27040239 MsG0480019781.01.T01:CDS 20.0%
!!! AGCCATTTTTTCATATTAAA+TGG - Chr4:27040024-27040043 None:intergenic 20.0%
!!! ATTTGCAAAATATATTTTGC+AGG + Chr4:27040827-27040846 MsG0480019781.01.T01:CDS 20.0%
!!! TATTTTAAACTTTGATGACT+CGG + Chr4:27040791-27040810 MsG0480019781.01.T01:CDS 20.0%
! AAATTTCTACGCATAATCAA+AGG + Chr4:27040438-27040457 MsG0480019781.01.T01:CDS 25.0%
! CAAAGGATATAGATTTAAAG+AGG + Chr4:27040455-27040474 MsG0480019781.01.T01:CDS 25.0%
! GATGAAAACAATGTATTAGA+GGG + Chr4:27040330-27040349 MsG0480019781.01.T01:CDS 25.0%
! GTTTAAGAACAACAAATGTT+TGG - Chr4:27040131-27040150 None:intergenic 25.0%
! TAGTGAAAGCAATATTTGTT+GGG - Chr4:27039816-27039835 None:intergenic 25.0%
! TCAAATGATGCTCTATTTAA+TGG + Chr4:27040402-27040421 MsG0480019781.01.T01:CDS 25.0%
! TGAAATAAGTTTGAAAACAC+TGG - Chr4:27040498-27040517 None:intergenic 25.0%
! TGATGAAAACAATGTATTAG+AGG + Chr4:27040329-27040348 MsG0480019781.01.T01:CDS 25.0%
!! AATAAAAAGAATTTGGAGCT+TGG - Chr4:27040592-27040611 None:intergenic 25.0%
!! ATAAAAAGAATTTGGAGCTT+GGG - Chr4:27040591-27040610 None:intergenic 25.0%
!! CTATTTTCTATTGTGGTTTT+AGG + Chr4:27039711-27039730 MsG0480019781.01.T01:intron 25.0%
!! TTGTTGTTCTTAAACTTCAA+CGG + Chr4:27040136-27040155 MsG0480019781.01.T01:CDS 25.0%
!!! TTCCAAAAGTATTTCATTTG+AGG - Chr4:27040898-27040917 None:intergenic 25.0%
AAAACAATGTATTAGAGGGA+GGG + Chr4:27040334-27040353 MsG0480019781.01.T01:CDS 30.0%
AAACTTCAACGGTTAGATAT+TGG + Chr4:27040147-27040166 MsG0480019781.01.T01:CDS 30.0%
AAGAAACATCTTCCAAATTC+AGG - Chr4:27040212-27040231 None:intergenic 30.0%
AGAAACATCTTCCAAATTCA+GGG - Chr4:27040211-27040230 None:intergenic 30.0%
ATTTACCAGATGAGTTATTG+CGG + Chr4:27039773-27039792 MsG0480019781.01.T01:CDS 30.0%
GATGAAACACATTCAAGATT+TGG - Chr4:27040753-27040772 None:intergenic 30.0%
GTAGTGAAAGCAATATTTGT+TGG - Chr4:27039817-27039836 None:intergenic 30.0%
TTACATCCTAAAGATTTCCT+GGG - Chr4:27040951-27040970 None:intergenic 30.0%
TTGGTCTCAACAAAACAATT+AGG - Chr4:27039578-27039597 None:intergenic 30.0%
TTTACATCCTAAAGATTTCC+TGG - Chr4:27040952-27040971 None:intergenic 30.0%
! ATTTACAAGTTGAGGATATC+AGG + Chr4:27040286-27040305 MsG0480019781.01.T01:CDS 30.0%
! CTCCTCAAATGAAATACTTT+TGG + Chr4:27040893-27040912 MsG0480019781.01.T01:CDS 30.0%
!! ACTTGTAAATCTTCTAGGAT+AGG - Chr4:27040276-27040295 None:intergenic 30.0%
AACCAATTTAGCCAATGTCA+AGG - Chr4:27040367-27040386 None:intergenic 35.0%
AGGGAGTAAATAGCATAGTT+GGG - Chr4:27039863-27039882 None:intergenic 35.0%
AGGGTTTAAATCCTTGACAT+TGG + Chr4:27040353-27040372 MsG0480019781.01.T01:CDS 35.0%
CACTGGAATAAATTCGAAAG+AGG - Chr4:27040481-27040500 None:intergenic 35.0%
CCTAGAAGATTTACAAGTTG+AGG + Chr4:27040278-27040297 MsG0480019781.01.T01:CDS 35.0%
CCTCAACTTGTAAATCTTCT+AGG - Chr4:27040281-27040300 None:intergenic 35.0%
CTACATCTGTTCTTTCGAAA+AGG + Chr4:27039833-27039852 MsG0480019781.01.T01:CDS 35.0%
GAAAACAATGTATTAGAGGG+AGG + Chr4:27040333-27040352 MsG0480019781.01.T01:CDS 35.0%
GACGAAATTCAGATCATCAT+TGG - Chr4:27039740-27039759 None:intergenic 35.0%
GTTTGGGAGATGAGAATAAT+GGG - Chr4:27040114-27040133 None:intergenic 35.0%
TGTTTGGGAGATGAGAATAA+TGG - Chr4:27040115-27040134 None:intergenic 35.0%
! ACACATTCAAGATTTGGAGT+TGG - Chr4:27040747-27040766 None:intergenic 35.0%
! AGTTGAGGCTAAAGATTTTG+TGG - Chr4:27039972-27039991 None:intergenic 35.0%
! ATCCTTGACATTGGCTAAAT+TGG + Chr4:27040362-27040381 MsG0480019781.01.T01:CDS 35.0%
! CACATTCAAGATTTGGAGTT+GGG - Chr4:27040746-27040765 None:intergenic 35.0%
! GTTGAGGCTAAAGATTTTGT+GGG - Chr4:27039971-27039990 None:intergenic 35.0%
! TTGAGGCTAAAGATTTTGTG+GGG - Chr4:27039970-27039989 None:intergenic 35.0%
!! AAAGATTTTGTGGGGTTGAT+TGG - Chr4:27039962-27039981 None:intergenic 35.0%
!!! AAATTCAGGGTTTTGAGTGA+CGG - Chr4:27040198-27040217 None:intergenic 35.0%
!!! CTTTTTTATCCCTTTGACAG+TGG + Chr4:27040688-27040707 MsG0480019781.01.T01:intron 35.0%
AAAAATTGTCCTCCTTTCCC+AGG + Chr4:27040931-27040950 MsG0480019781.01.T01:CDS 40.0%
AGTCGTTGATGTCCTCAAAT+CGG - Chr4:27039891-27039910 None:intergenic 40.0%
AGTTGGGTATTTCCATTCCT+TGG - Chr4:27040730-27040749 None:intergenic 40.0%
CACAAAACGACATCGTATTG+AGG + Chr4:27040050-27040069 MsG0480019781.01.T01:CDS 40.0%
CAGGGAGTAAATAGCATAGT+TGG - Chr4:27039864-27039883 None:intergenic 40.0%
CATCTGTTCTTTCGAAAAGG+TGG + Chr4:27039836-27039855 MsG0480019781.01.T01:CDS 40.0%
CGATCGCTCAATTCATTGTT+GGG + Chr4:27040536-27040555 MsG0480019781.01.T01:CDS 40.0%
GTCACTCAAAACCCTGAATT+TGG + Chr4:27040197-27040216 MsG0480019781.01.T01:CDS 40.0%
TAAAGATTTCCTGGGAAAGG+AGG - Chr4:27040943-27040962 None:intergenic 40.0%
TCCTAAAGATTTCCTGGGAA+AGG - Chr4:27040946-27040965 None:intergenic 40.0%
TCCTTTCCCAGGAAATCTTT+AGG + Chr4:27040942-27040961 MsG0480019781.01.T01:CDS 40.0%
TGGCTAAATTGGTTAGAGCA+AGG + Chr4:27040373-27040392 MsG0480019781.01.T01:CDS 40.0%
TTTAGCCTCAACTGTTCCTT+TGG + Chr4:27039979-27039998 MsG0480019781.01.T01:CDS 40.0%
!! GATGAGAATAATGGGCTTCA+AGG - Chr4:27040106-27040125 None:intergenic 40.0%
!!! CTCAATACGATGTCGTTTTG+TGG - Chr4:27040052-27040071 None:intergenic 40.0%
AGGTCTTCATCCACTGTCAA+AGG - Chr4:27040701-27040720 None:intergenic 45.0%
ATGTCCTCAAATCGGAGAAC+AGG - Chr4:27039883-27039902 None:intergenic 45.0%
ATGTGCCGCAATAACTCATC+TGG - Chr4:27039781-27039800 None:intergenic 45.0%
GAAACAGAGTTCTGCAGTTC+AGG + Chr4:27039539-27039558 MsG0480019781.01.T01:CDS 45.0%
GACAATGCGACAAAAGCGAT+GGG - Chr4:27039914-27039933 None:intergenic 45.0%
GCGATCGCTCAATTCATTGT+TGG + Chr4:27040535-27040554 MsG0480019781.01.T01:CDS 45.0%
GGTCTTCATCCACTGTCAAA+GGG - Chr4:27040700-27040719 None:intergenic 45.0%
TGACAATGCGACAAAAGCGA+TGG - Chr4:27039915-27039934 None:intergenic 45.0%
TGTCCTCAAATCGGAGAACA+GGG - Chr4:27039882-27039901 None:intergenic 45.0%
TTGAGGATATCAGGATGCGA+AGG + Chr4:27040295-27040314 MsG0480019781.01.T01:CDS 45.0%
! ATTTTGCTTGCGTCCTCCAA+AGG - Chr4:27039998-27040017 None:intergenic 45.0%
! GAATTTGGAGCTTGGGAGAA+TGG - Chr4:27040584-27040603 None:intergenic 45.0%
AGCCTCAACTGTTCCTTTGG+AGG + Chr4:27039982-27040001 MsG0480019781.01.T01:CDS 50.0%
GTCCTCCAAAGGAACAGTTG+AGG - Chr4:27039987-27040006 None:intergenic 50.0%
TTTCCATTCCTTGGACGAGC+AGG - Chr4:27040721-27040740 None:intergenic 50.0%
! ACTCCCTGTTCTCCGATTTG+AGG + Chr4:27039876-27039895 MsG0480019781.01.T01:CDS 50.0%
! TGCAGAACTCTGTTTCTCCG+TGG - Chr4:27039535-27039554 None:intergenic 50.0%
! TTTGGAGCTTGGGAGAATGG+CGG - Chr4:27040581-27040600 None:intergenic 50.0%
!! TAATGGGCTTCAAGGTGTGC+TGG - Chr4:27040098-27040117 None:intergenic 50.0%
AGACCTGCTCGTCCAAGGAA+TGG + Chr4:27040715-27040734 MsG0480019781.01.T01:CDS 55.0%
GATGAAGACCTGCTCGTCCA+AGG + Chr4:27040710-27040729 MsG0480019781.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 27039516 27041001 27039516 ID=MsG0480019781.01;Name=MsG0480019781.01
Chr4 mRNA 27039516 27041001 27039516 ID=MsG0480019781.01.T01;Parent=MsG0480019781.01;Name=MsG0480019781.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|0.66|1|1|3|0|407
Chr4 exon 27039516 27039560 27039516 ID=MsG0480019781.01.T01:exon:11756;Parent=MsG0480019781.01.T01
Chr4 exon 27039733 27040617 27039733 ID=MsG0480019781.01.T01:exon:11757;Parent=MsG0480019781.01.T01
Chr4 exon 27040708 27041001 27040708 ID=MsG0480019781.01.T01:exon:11758;Parent=MsG0480019781.01.T01
Chr4 CDS 27039516 27039560 27039516 ID=MsG0480019781.01.T01:cds;Parent=MsG0480019781.01.T01
Chr4 CDS 27039733 27040617 27039733 ID=MsG0480019781.01.T01:cds;Parent=MsG0480019781.01.T01
Chr4 CDS 27040708 27041001 27040708 ID=MsG0480019781.01.T01:cds;Parent=MsG0480019781.01.T01
Gene Sequence

>MsG0480019781.01.T01

ATGAAGGAACGATCATCCACGGAGAAACAGAGTTCTGCAGTTCAGGTGTCCAATGATGATCTGAATTTCGTCGATAGAATTAGTGATTTACCAGATGAGTTATTGCGGCACATACTTTGTTTTCTCCCAACAAATATTGCTTTCACTACATCTGTTCTTTCGAAAAGGTGGACCCAACTATGCTATTTACTCCCTGTTCTCCGATTTGAGGACATCAACGACTCCCATCGCTTTTGTCGCATTGTCAACAATGTCATGCTTTCTCGTGTAACCAATCAACCCCACAAAATCTTTAGCCTCAACTGTTCCTTTGGAGGACGCAAGCAAAATAGTCCATTTAATATGAAAAAATGGCTAGAAGCCACAAAACGACATCGTATTGAGGAATTTCATCTCAAACTGTGTTACCAGCACACCTTGAAGCCCATTATTCTCATCTCCCAAACATTTGTTGTTCTTAAACTTCAACGGTTAGATATTGGAAAAAATACTTCGTTTGTTGATCTTCCGTCACTCAAAACCCTGAATTTGGAAGATGTTTCTTTTGAAAATTGGAATGATTATATAAATTTTCTTCATGCTTGTCCTATCCTAGAAGATTTACAAGTTGAGGATATCAGGATGCGAAGGTTGATGAAACATGATGAAAACAATGTATTAGAGGGAGGGTTTAAATCCTTGACATTGGCTAAATTGGTTAGAGCAAGGATCGATTCAAATGATGCTCTATTTAATGGTATTGATAATGTCAAATTTCTACGCATAATCAAAGGATATAGATTTAAAGAGGCCTCTTTCGAATTTATTCCAGTGTTTTCAAACTTATTTCAAATTGAACTAGTGTTTTGCGATCGCTCAATTCATTGTTGGGATGCTGTAGTAGAACTGCTCCGCCATTCTCCCAAGCTCCAAATTCTTTTTATTAAAAAGTGGATGAAGACCTGCTCGTCCAAGGAATGGAAATACCCAACTCCAAATCTTGAATGTGTTTCATCTCACCTTAGATCATGTACTATTTTAAACTTTGATGACTCGGCAAATGATCTTCGATTTGCAAAATATATTTTGCAGGATGCGAGTATTTTACAATACATGAAAATCGGAGTTGTTATTGACTCCTCAAATGAAATACTTTTGGAAAAACGTCAAATTAAAAAATTGTCCTCCTTTCCCAGGAAATCTTTAGGATGTAAACTTTCATTTGAATTTAAGTATATTTACTAG
Protein sequence

>MsG0480019781.01.T01

MKERSSTEKQSSAVQVSNDDLNFVDRISDLPDELLRHILCFLPTNIAFTTSVLSKRWTQLCYLLPVLRFEDINDSHRFCRIVNNVMLSRVTNQPHKIFSLNCSFGGRKQNSPFNMKKWLEATKRHRIEEFHLKLCYQHTLKPIILISQTFVVLKLQRLDIGKNTSFVDLPSLKTLNLEDVSFENWNDYINFLHACPILEDLQVEDIRMRRLMKHDENNVLEGGFKSLTLAKLVRARIDSNDALFNGIDNVKFLRIIKGYRFKEASFEFIPVFSNLFQIELVFCDRSIHCWDAVVELLRHSPKLQILFIKKWMKTCSSKEWKYPTPNLECVSSHLRSCTILNFDDSANDLRFAKYILQDASILQYMKIGVVIDSSNEILLEKRQIKKLSSFPRKSLGCKLSFEFKYIY*