AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033401.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033401.01.T01 MTR_6g045333 87.444 446 56 0 1 446 1 446 0.0 801
MsG0680033401.01.T01 MTR_3g071850 77.916 403 89 0 38 440 1 403 0.0 642
MsG0680033401.01.T01 MTR_5g007410 53.960 404 176 5 40 438 2 400 9.64e-134 393
MsG0680033401.01.T01 MTR_5g045510 53.299 394 158 5 51 444 3 370 8.65e-127 372
MsG0680033401.01.T01 MTR_2g036470 52.605 403 170 9 53 446 6 396 5.66e-122 361
MsG0680033401.01.T01 MTR_5g045170 50.510 392 176 8 60 446 13 391 7.75e-119 353
MsG0680033401.01.T01 MTR_0009s0080 51.531 392 181 8 55 444 12 396 7.85e-118 351
MsG0680033401.01.T01 MTR_5g039490 49.367 395 157 8 58 445 17 375 1.98e-110 330
MsG0680033401.01.T01 MTR_3g071790 82.178 202 36 0 206 407 1 202 1.14e-108 320
MsG0680033401.01.T01 MTR_5g039450 45.153 392 170 9 58 443 3 355 7.71e-98 298
MsG0680033401.01.T01 MTR_5g031970 43.367 392 171 7 58 446 13 356 1.11e-93 287
MsG0680033401.01.T01 MTR_5g039470 46.608 339 165 7 77 410 1 328 8.39e-92 281
MsG0680033401.01.T01 MTR_1g066830 40.153 391 222 7 58 445 5 386 4.82e-87 271
MsG0680033401.01.T01 MTR_5g063950 42.487 386 185 8 61 443 8 359 4.76e-85 265
MsG0680033401.01.T01 MTR_5g058100 40.816 392 214 10 58 445 6 383 5.60e-84 263
MsG0680033401.01.T01 MTR_7g026500 41.519 395 207 11 61 445 14 394 5.49e-83 261
MsG0680033401.01.T01 MTR_5g058000 40.617 389 207 9 60 445 7 374 7.17e-80 252
MsG0680033401.01.T01 MTR_5g073420 37.852 391 217 8 60 445 10 379 2.08e-79 251
MsG0680033401.01.T01 MTR_1089s0010 39.646 396 207 11 59 445 6 378 1.47e-77 246
MsG0680033401.01.T01 MTR_1g085120 40.355 394 211 10 61 445 92 470 1.22e-76 247
MsG0680033401.01.T01 MTR_1g085120 40.355 394 211 10 61 445 167 545 5.07e-76 247
MsG0680033401.01.T01 MTR_6g022500 38.107 391 220 11 60 444 100 474 1.79e-73 239
MsG0680033401.01.T01 MTR_6g040270 37.783 397 221 11 55 444 2 379 1.53e-71 231
MsG0680033401.01.T01 MTR_1g108820 39.899 396 209 14 60 444 7 384 1.20e-70 228
MsG0680033401.01.T01 MTR_1g059860 46.945 311 123 9 131 406 8 311 1.70e-70 226
MsG0680033401.01.T01 MTR_6g011460 38.539 397 216 8 58 445 43 420 1.03e-68 225
MsG0680033401.01.T01 MTR_7g055943 37.284 405 226 11 53 445 32 420 1.88e-67 221
MsG0680033401.01.T01 MTR_4g039440 36.776 397 222 10 60 445 33 411 3.01e-67 221
MsG0680033401.01.T01 MTR_5g065100 39.332 389 184 11 62 446 9 349 2.59e-65 216
MsG0680033401.01.T01 MTR_1g108800 38.889 396 169 12 60 444 7 340 1.68e-60 201
MsG0680033401.01.T01 MTR_6g022360 33.671 395 226 10 60 446 42 408 1.30e-56 192
MsG0680033401.01.T01 MTR_5g073370 34.351 393 230 9 61 444 5 378 1.21e-55 189
MsG0680033401.01.T01 MTR_5g061680 35.258 329 176 5 52 380 2 293 1.15e-52 180
MsG0680033401.01.T01 MTR_5g061410 38.851 296 151 6 58 353 2 267 1.69e-52 177
MsG0680033401.01.T01 MTR_3g107100 31.281 406 237 13 61 444 11 396 2.18e-47 168
MsG0680033401.01.T01 MTR_1g085120 39.073 302 163 9 61 353 179 468 1.47e-46 167
MsG0680033401.01.T01 MTR_7g098510 32.763 409 241 8 50 445 3 390 1.65e-46 165
MsG0680033401.01.T01 MTR_6g044572 33.570 423 208 15 60 445 1 387 2.32e-46 165
MsG0680033401.01.T01 MTR_2g007450 31.640 433 247 13 46 444 1 418 2.69e-46 166
MsG0680033401.01.T01 MTR_6g044560 33.562 438 216 16 47 445 162 563 3.16e-46 168
MsG0680033401.01.T01 MTR_1g108820 37.829 304 167 10 60 353 7 298 1.24e-45 162
MsG0680033401.01.T01 MTR_7g075820 32.688 413 223 14 61 444 6 392 3.18e-45 162
MsG0680033401.01.T01 MTR_3g107120 32.603 411 232 14 54 443 2 388 1.34e-44 160
MsG0680033401.01.T01 MTR_5g073340 36.556 331 165 12 60 382 7 300 1.99e-44 157
MsG0680033401.01.T01 MTR_3g107160 30.147 408 227 13 59 443 8 380 4.47e-44 159
MsG0680033401.01.T01 MTR_5g054920 44.262 183 95 3 231 413 2 177 1.20e-43 152
MsG0680033401.01.T01 MTR_5g024060 47.340 188 85 5 260 442 26 204 1.31e-43 154
MsG0680033401.01.T01 MTR_1g053025 31.358 405 238 16 60 443 1 386 1.99e-43 157
MsG0680033401.01.T01 MTR_2g007400 31.175 417 233 14 58 444 9 401 2.75e-43 157
MsG0680033401.01.T01 MTR_4g098590 32.626 377 213 14 63 417 1 358 5.58e-43 155
MsG0680033401.01.T01 MTR_7g115270 31.127 408 236 13 61 443 12 399 7.87e-43 155
MsG0680033401.01.T01 MTR_6g022520 36.223 323 189 8 129 445 1 312 2.99e-42 152
MsG0680033401.01.T01 MTR_0543s0010 31.061 396 232 10 61 446 86 450 3.64e-42 155
MsG0680033401.01.T01 MTR_3g108560 31.234 397 235 11 61 446 20 389 4.08e-42 153
MsG0680033401.01.T01 MTR_7g098570 34.063 411 228 14 50 442 4 389 1.25e-41 154
MsG0680033401.01.T01 MTR_1g041245 33.500 400 228 15 60 445 10 385 1.76e-41 152
MsG0680033401.01.T01 MTR_5g083890 32.779 421 221 15 61 443 6 402 2.33e-41 154
MsG0680033401.01.T01 MTR_7g056433 31.051 409 252 12 46 445 1 388 6.14e-41 150
MsG0680033401.01.T01 MTR_7g098480 33.086 405 243 11 50 445 3 388 7.84e-41 152
MsG0680033401.01.T01 MTR_7g056277 32.564 390 237 9 61 445 259 627 1.34e-40 154
MsG0680033401.01.T01 MTR_7g056287 32.051 390 239 9 61 445 3 371 2.50e-40 148
MsG0680033401.01.T01 MTR_7g033990 31.407 398 232 11 55 438 5 375 4.28e-40 149
MsG0680033401.01.T01 MTR_7g033915 31.202 391 230 13 60 446 10 365 2.13e-39 145
MsG0680033401.01.T01 MTR_3g040700 29.843 382 227 11 35 406 17 367 4.75e-39 146
MsG0680033401.01.T01 MTR_0492s0020 30.366 382 225 10 61 432 86 436 6.74e-39 146
MsG0680033401.01.T01 MTR_7g007080 31.343 402 230 14 61 444 4 377 5.82e-38 142
MsG0680033401.01.T01 MTR_7g088260 31.818 396 234 13 61 445 91 461 6.28e-38 144
MsG0680033401.01.T01 MTR_7g032370 32.391 389 208 17 73 445 2 351 2.39e-37 140
MsG0680033401.01.T01 MTR_3g036250 29.620 395 234 11 59 443 3 363 4.42e-37 139
MsG0680033401.01.T01 MTR_3g023630 32.507 363 218 9 58 414 5 346 5.28e-37 139
MsG0680033401.01.T01 MTR_7g032380 30.808 396 214 14 60 445 10 355 7.14e-37 139
MsG0680033401.01.T01 MTR_2g008310 29.620 395 242 10 60 444 1 369 3.27e-36 137
MsG0680033401.01.T01 MTR_3g108150 30.750 400 238 11 61 446 13 387 3.79e-36 137
MsG0680033401.01.T01 MTR_1g107385 30.455 440 250 15 36 444 7 421 7.31e-36 137
MsG0680033401.01.T01 MTR_5g008920 30.357 392 245 12 60 445 11 380 1.20e-35 136
MsG0680033401.01.T01 MTR_3g105060 29.949 394 234 11 60 445 13 372 4.44e-35 134
MsG0680033401.01.T01 MTR_5g008950 29.563 389 233 12 68 445 6 364 5.33e-35 134
MsG0680033401.01.T01 MTR_2g005990 30.918 414 232 12 60 444 5 393 1.70e-34 133
MsG0680033401.01.T01 MTR_7g034115 28.729 362 230 10 60 413 10 351 1.13e-33 130
MsG0680033401.01.T01 MTR_2g007500 30.508 354 197 14 54 388 7 330 2.14e-33 129
MsG0680033401.01.T01 MTR_7g083740 28.571 392 233 9 60 445 16 366 7.15e-33 128
MsG0680033401.01.T01 MTR_7g034120 31.250 320 185 12 139 445 10 307 1.08e-31 123
MsG0680033401.01.T01 MTR_3g099830 28.710 411 222 13 58 444 9 372 5.51e-30 120
MsG0680033401.01.T01 MTR_7g056420 29.262 393 233 11 54 438 2 357 5.96e-30 124
MsG0680033401.01.T01 MTR_7g056430 29.262 393 233 11 54 438 2 357 5.98e-30 124
MsG0680033401.01.T01 MTR_3g095600 33.906 233 130 3 60 291 3 212 6.28e-30 118
MsG0680033401.01.T01 MTR_2g008320 29.584 409 234 16 58 444 49 425 1.13e-29 120
MsG0680033401.01.T01 MTR_3g026920 29.208 404 196 14 60 413 18 381 3.94e-29 118
MsG0680033401.01.T01 MTR_5g033200 41.379 174 86 5 267 437 13 173 5.73e-29 112
MsG0680033401.01.T01 MTR_3g087260 28.726 463 240 15 59 446 10 457 8.21e-29 118
MsG0680033401.01.T01 MTR_1377s0010 45.185 135 62 4 279 413 5 127 1.07e-28 110
MsG0680033401.01.T01 MTR_7g007340 30.871 379 201 14 46 413 1 329 1.95e-28 115
MsG0680033401.01.T01 MTR_5g024050 62.921 89 32 1 206 293 1 89 2.20e-28 108
MsG0680033401.01.T01 MTR_3g095630 39.459 185 89 8 267 445 18 185 1.00e-27 109
MsG0680033401.01.T01 MTR_2g007360 29.398 415 214 17 58 444 9 372 1.78e-27 113
MsG0680033401.01.T01 MTR_3g467400 27.160 405 236 11 60 445 2 366 1.89e-27 113
MsG0680033401.01.T01 MTR_7g034110 29.191 346 174 9 60 395 10 294 4.59e-27 111
MsG0680033401.01.T01 MTR_5g084070 29.371 429 234 16 59 438 11 419 5.36e-27 112
MsG0680033401.01.T01 MTR_7g056020 27.621 391 216 13 61 431 16 359 1.71e-26 112
MsG0680033401.01.T01 MTR_7g022105 27.960 397 249 11 54 432 35 412 1.08e-25 108
MsG0680033401.01.T01 MTR_7g021990 28.321 399 243 13 54 431 34 410 1.33e-25 108
MsG0680033401.01.T01 MTR_3g082890 27.778 414 247 14 59 445 95 483 1.66e-25 108
MsG0680033401.01.T01 MTR_5g013500 29.107 347 192 13 121 445 50 364 4.98e-25 106
MsG0680033401.01.T01 MTR_7g021950 28.321 399 243 13 54 431 34 410 5.02e-25 107
MsG0680033401.01.T01 MTR_5g080710 27.191 445 260 16 52 446 24 454 1.45e-24 105
MsG0680033401.01.T01 MTR_7g060470 28.155 412 223 15 61 433 3 380 3.05e-24 104
MsG0680033401.01.T01 MTR_3g095640 38.750 160 92 3 60 214 17 175 4.71e-24 99.0
MsG0680033401.01.T01 MTR_3g108560 30.592 304 174 10 61 353 20 297 5.42e-24 102
MsG0680033401.01.T01 MTR_8g058965 26.549 452 258 16 60 445 12 455 7.18e-24 103
MsG0680033401.01.T01 MTR_2g007550 29.189 370 195 11 54 417 7 315 3.02e-23 100
MsG0680033401.01.T01 MTR_5g044790 41.830 153 55 4 324 446 292 440 8.09e-23 100
MsG0680033401.01.T01 MTR_3g082890 26.154 455 239 16 59 445 15 440 1.18e-22 100
MsG0680033401.01.T01 MTR_7g114710 27.764 407 218 14 60 445 12 363 1.65e-22 99.0
MsG0680033401.01.T01 MTR_5g076150 35.377 212 115 7 183 378 22 227 1.84e-22 95.9
MsG0680033401.01.T01 MTR_8g077460 26.551 403 240 13 61 445 10 374 1.92e-22 99.0
MsG0680033401.01.T01 MTR_5g012840 27.035 344 175 11 86 418 14 292 6.28e-22 96.3
MsG0680033401.01.T01 MTR_3g109982 32.872 289 150 10 57 318 9 280 8.06e-22 99.0
MsG0680033401.01.T01 MTR_3g109982 32.584 267 151 10 183 438 220 468 2.99e-21 97.1
MsG0680033401.01.T01 MTR_7g056447 36.022 186 107 4 61 243 9 185 9.27e-22 95.5
MsG0680033401.01.T01 MTR_3g110010 32.872 289 150 10 57 318 9 280 1.25e-21 98.2
MsG0680033401.01.T01 MTR_4g080610 24.747 396 234 11 63 446 14 357 2.26e-20 92.4
MsG0680033401.01.T01 MTR_8g085430 34.694 196 115 7 60 247 10 200 3.60e-20 91.7
MsG0680033401.01.T01 MTR_8g085430 34.259 108 64 2 311 413 191 296 2.83e-12 68.2
MsG0680033401.01.T01 MTR_4g032730 25.161 465 257 17 60 445 14 466 7.30e-20 92.0
MsG0680033401.01.T01 MTR_8g467800 27.494 451 243 19 61 445 20 452 1.07e-19 91.7
MsG0680033401.01.T01 MTR_5g092960 24.169 451 270 16 60 445 18 461 2.28e-19 90.5
MsG0680033401.01.T01 MTR_5g058350 33.846 195 99 5 55 249 2 166 3.07e-19 85.5
MsG0680033401.01.T01 MTR_7g075800 24.939 413 228 18 61 416 9 396 8.27e-19 89.7
MsG0680033401.01.T01 MTR_8g062010 26.770 452 247 20 54 445 2 429 1.22e-18 88.2
MsG0680033401.01.T01 MTR_6g022390 39.837 123 69 3 60 177 4 126 1.69e-18 82.4
MsG0680033401.01.T01 MTR_2g007090 29.098 244 132 9 209 445 84 293 8.47e-18 84.0
MsG0680033401.01.T01 MTR_8g014160 24.402 418 255 13 58 445 38 424 1.38e-17 85.1
MsG0680033401.01.T01 MTR_6g029350 30.942 223 113 8 235 444 2 196 2.06e-17 81.6
MsG0680033401.01.T01 MTR_0571s0010 42.857 84 45 1 61 144 32 112 7.44e-17 76.6
MsG0680033401.01.T01 MTR_8g445780 23.250 400 234 13 55 398 7 389 2.57e-16 80.9
MsG0680033401.01.T01 MTR_8g062270 23.297 455 266 19 60 446 15 454 4.52e-16 80.5
MsG0680033401.01.T01 MTR_8g468840 24.000 450 260 16 54 436 7 441 7.32e-16 79.7
MsG0680033401.01.T01 MTR_5g073400 41.593 113 61 3 136 247 4 112 1.03e-15 74.3
MsG0680033401.01.T01 MTR_8g070950 23.620 453 256 17 55 445 9 433 2.53e-15 78.2
MsG0680033401.01.T01 MTR_7g007370 34.454 238 127 11 185 411 96 315 2.85e-15 77.0
MsG0680033401.01.T01 MTR_6g083130 45.161 93 39 1 159 251 233 313 5.46e-15 76.3
MsG0680033401.01.T01 MTR_8g062310 23.095 433 261 13 58 445 22 427 8.30e-15 76.6
MsG0680033401.01.T01 MTR_7g033945 31.429 175 102 6 60 225 10 175 1.02e-14 72.4
MsG0680033401.01.T01 MTR_3g106960 34.532 139 72 6 281 413 46 171 1.13e-14 73.9
MsG0680033401.01.T01 MTR_8g014260 22.545 448 283 11 55 445 10 450 1.40e-14 75.9
MsG0680033401.01.T01 MTR_6g022410 44.304 79 44 0 367 445 28 106 2.10e-14 69.7
MsG0680033401.01.T01 MTR_8g468810 30.882 204 129 8 61 255 25 225 3.07e-14 73.9
MsG0680033401.01.T01 MTR_8g468810 30.882 204 129 8 61 255 25 225 3.48e-14 73.9
MsG0680033401.01.T01 MTR_4g134150 31.579 190 113 5 59 247 15 188 3.51e-14 72.0
MsG0680033401.01.T01 MTR_8g468810 30.882 204 129 8 61 255 25 225 4.19e-14 73.6
MsG0680033401.01.T01 MTR_8g468810 30.882 204 129 8 61 255 25 225 4.48e-14 74.3
MsG0680033401.01.T01 MTR_8g468810 30.882 204 129 8 61 255 25 225 5.12e-14 73.6
MsG0680033401.01.T01 MTR_3g114200 37.805 164 85 7 47 205 8 159 1.21e-13 68.9
MsG0680033401.01.T01 MTR_3g107140 30.729 192 111 6 70 247 1 184 1.42e-13 69.7
MsG0680033401.01.T01 MTR_5g024040 55.172 58 24 1 44 99 3 60 1.84e-13 65.5
MsG0680033401.01.T01 MTR_4g093690 27.801 241 143 10 61 289 18 239 4.41e-13 69.7
MsG0680033401.01.T01 MTR_5g045700 50.000 68 24 1 40 107 2 59 4.87e-13 64.3
MsG0680033401.01.T01 MTR_8g058970 29.911 224 128 10 52 249 10 230 4.91e-13 71.2
MsG0680033401.01.T01 MTR_8g062080 29.902 204 125 9 61 254 23 218 5.35e-13 70.9
MsG0680033401.01.T01 MTR_6g045307 73.333 45 12 0 158 202 750 794 5.72e-13 71.6
MsG0680033401.01.T01 MTR_5g092960 26.848 257 166 8 60 298 18 270 8.06e-13 70.1
MsG0680033401.01.T01 MTR_7g056280 27.746 173 103 5 278 443 413 570 9.05e-13 70.5
MsG0680033401.01.T01 MTR_4g056030 30.457 197 119 6 61 248 9 196 1.03e-12 70.1
MsG0680033401.01.T01 MTR_2g083840 23.649 444 272 19 61 445 21 456 1.07e-12 70.1
MsG0680033401.01.T01 MTR_3g094980 37.209 86 51 2 331 413 32 117 1.43e-12 66.2
MsG0680033401.01.T01 MTR_4g056020 30.412 194 117 7 61 245 9 193 1.66e-12 69.3
MsG0680033401.01.T01 MTR_4g080787 23.653 427 250 13 55 413 13 431 1.97e-12 69.3
MsG0680033401.01.T01 MTR_8g467800 27.174 276 144 10 61 304 20 270 2.20e-12 68.6
MsG0680033401.01.T01 MTR_8g467790 29.064 203 119 8 60 247 147 339 3.96e-12 68.6
MsG0680033401.01.T01 MTR_7g034090 35.461 141 71 7 313 445 183 311 4.11e-12 68.2
MsG0680033401.01.T01 MTR_2g020180 32.143 140 71 4 313 445 92 214 5.21e-12 65.5
MsG0680033401.01.T01 MTR_6g033095 44.872 78 40 1 336 413 110 184 5.54e-12 65.1
MsG0680033401.01.T01 MTR_7g056417 50.000 68 34 0 180 247 4 71 9.25e-12 63.5
MsG0680033401.01.T01 MTR_8g014290 30.201 149 77 4 61 186 10 154 1.25e-11 63.2
MsG0680033401.01.T01 MTR_2g082800 29.032 217 117 9 61 249 27 234 1.80e-11 66.2
MsG0680033401.01.T01 MTR_5g021550 31.757 148 85 4 61 196 19 162 2.05e-11 62.8
MsG0680033401.01.T01 MTR_2g007610 30.061 163 88 6 293 444 2 149 4.61e-11 62.0
MsG0680033401.01.T01 MTR_8g469020 28.936 235 135 10 61 272 7 232 5.70e-11 64.7
MsG0680033401.01.T01 MTR_1g038710 31.841 201 117 9 57 245 15 207 6.40e-11 64.7
MsG0680033401.01.T01 MTR_3g115430 29.231 130 81 4 321 445 1 124 7.54e-11 60.1
MsG0680033401.01.T01 MTR_4g024780 26.220 328 201 9 42 342 130 443 8.49e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033401.01.T01 AT4G26340 26.097 433 258 14 60 445 1 418 3.58e-22 98.6
MsG0680033401.01.T01 AT5G56440 26.846 447 248 17 60 445 1 429 7.65e-22 97.8
MsG0680033401.01.T01 AT5G56560 25.635 433 250 13 63 445 7 417 1.96e-21 96.3
MsG0680033401.01.T01 AT5G56420 27.273 429 255 15 61 445 6 421 2.66e-21 96.3
MsG0680033401.01.T01 AT5G56420 27.273 429 255 15 61 445 6 421 2.66e-21 96.3
MsG0680033401.01.T01 AT5G56420 27.273 429 255 15 61 445 6 421 2.66e-21 96.3
MsG0680033401.01.T01 AT4G26350 27.069 447 245 16 60 445 1 427 8.10e-21 94.7
MsG0680033401.01.T01 AT3G42770 25.792 442 253 18 63 446 1 425 3.81e-20 93.2
MsG0680033401.01.T01 AT5G56370 24.598 435 264 12 60 445 1 420 1.33e-19 90.9
MsG0680033401.01.T01 AT5G56370 24.598 435 264 12 60 445 1 420 1.33e-19 90.9
MsG0680033401.01.T01 AT5G22670 34.896 192 109 5 61 248 11 190 2.09e-19 90.5
MsG0680033401.01.T01 AT4G14103 37.949 195 101 6 61 245 8 192 1.60e-18 87.4
MsG0680033401.01.T01 AT4G14103 37.949 195 101 6 61 245 8 192 1.60e-18 87.4
MsG0680033401.01.T01 AT4G14103 37.949 195 101 6 61 245 8 192 2.06e-18 87.8
MsG0680033401.01.T01 AT3G51530 27.654 405 214 16 61 409 30 411 3.72e-18 87.0
MsG0680033401.01.T01 AT3G59200 34.872 195 109 9 61 245 7 193 4.61e-18 85.9
MsG0680033401.01.T01 AT3G44060 24.885 434 243 14 68 438 6 419 5.54e-18 86.3
MsG0680033401.01.T01 AT3G59200 34.359 195 110 8 61 245 7 193 1.05e-17 85.9
MsG0680033401.01.T01 AT4G00160 26.914 405 220 18 61 409 16 400 1.65e-17 85.1
MsG0680033401.01.T01 AT5G22610 24.186 430 265 14 61 443 18 433 2.55e-17 84.3
MsG0680033401.01.T01 AT4G27050 23.542 463 264 16 61 446 4 453 4.49e-17 83.6
MsG0680033401.01.T01 AT4G27050 23.542 463 264 16 61 446 4 453 4.49e-17 83.6
MsG0680033401.01.T01 AT4G27050 23.542 463 264 16 61 446 4 453 4.49e-17 83.6
MsG0680033401.01.T01 AT4G27050 23.542 463 264 16 61 446 4 453 4.49e-17 83.6
MsG0680033401.01.T01 AT4G27050 23.542 463 264 16 61 446 4 453 4.49e-17 83.6
MsG0680033401.01.T01 AT5G56690 25.245 408 242 15 63 416 4 402 6.07e-17 82.8
MsG0680033401.01.T01 AT5G41840 33.824 204 115 6 61 248 14 213 1.00e-16 82.8
MsG0680033401.01.T01 AT4G22280 24.312 436 256 15 60 445 1 412 1.61e-16 81.6
MsG0680033401.01.T01 AT5G60610 24.634 410 233 11 60 415 1 388 1.63e-16 81.3
MsG0680033401.01.T01 AT5G60610 24.634 410 233 11 60 415 1 388 1.63e-16 81.3
MsG0680033401.01.T01 AT5G41830 32.843 204 110 6 61 245 13 208 2.58e-16 81.6
MsG0680033401.01.T01 AT3G58880 35.468 203 116 7 60 253 2 198 3.49e-16 80.9
MsG0680033401.01.T01 AT3G59240 34.694 196 108 9 61 245 8 194 1.23e-15 79.3
MsG0680033401.01.T01 AT1G32375 24.719 445 252 16 60 445 1 421 1.41e-15 79.0
MsG0680033401.01.T01 AT1G32375 24.719 445 252 16 60 445 1 421 1.41e-15 79.0
MsG0680033401.01.T01 AT4G22280 32.461 191 113 6 60 245 1 180 2.01e-15 77.4
MsG0680033401.01.T01 AT5G56410 32.524 206 114 7 60 245 1 201 5.36e-15 77.4
MsG0680033401.01.T01 AT4G10400 26.478 423 259 16 60 445 1 408 5.89e-15 77.0
MsG0680033401.01.T01 AT4G10400 26.478 423 259 16 60 445 1 408 5.89e-15 77.0
MsG0680033401.01.T01 AT4G10400 26.478 423 259 16 60 445 1 408 5.89e-15 77.0
MsG0680033401.01.T01 AT4G00320 31.841 201 116 5 61 245 13 208 5.97e-15 77.4
MsG0680033401.01.T01 AT5G02930 32.663 199 109 8 60 252 27 206 7.62e-15 77.0
MsG0680033401.01.T01 AT3G52680 27.094 406 216 19 61 409 21 403 1.00e-14 76.3
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 1.84e-14 74.3
MsG0680033401.01.T01 AT4G00315 32.812 192 117 6 60 245 1 186 2.71e-14 75.1
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 2.78e-14 74.3
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 2.78e-14 74.3
MsG0680033401.01.T01 AT2G29910 31.016 187 117 4 61 245 5 181 2.94e-14 73.9
MsG0680033401.01.T01 AT2G29910 31.016 187 117 4 61 245 5 181 2.94e-14 73.9
MsG0680033401.01.T01 AT2G26860 26.551 403 224 16 60 405 1 388 3.62e-14 74.3
MsG0680033401.01.T01 AT2G26860 26.551 403 224 16 60 405 1 388 3.62e-14 74.3
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 21 211 3.71e-14 74.3
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 4.26e-14 74.3
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 4.26e-14 74.3
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 4.26e-14 74.3
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 4.26e-14 74.3
MsG0680033401.01.T01 AT2G29910 31.016 187 117 4 61 245 5 181 5.03e-14 73.6
MsG0680033401.01.T01 AT2G29910 31.016 187 117 4 61 245 5 181 5.03e-14 73.6
MsG0680033401.01.T01 AT2G29910 31.016 187 117 4 61 245 5 181 5.03e-14 73.6
MsG0680033401.01.T01 AT2G29910 31.016 187 117 4 61 245 5 181 5.03e-14 73.6
MsG0680033401.01.T01 AT1G06630 31.606 193 122 5 61 245 12 202 5.49e-14 74.3
MsG0680033401.01.T01 AT3G26930 26.977 430 225 18 79 445 39 442 5.66e-14 73.9
MsG0680033401.01.T01 AT2G29910 31.016 187 117 4 61 245 29 205 6.82e-14 73.6
MsG0680033401.01.T01 AT3G49150 33.673 196 117 7 57 245 12 201 7.10e-14 73.9
MsG0680033401.01.T01 AT3G56780 30.851 188 112 6 63 245 9 183 8.24e-14 73.6
MsG0680033401.01.T01 AT5G56370 33.333 192 106 7 60 243 1 178 9.81e-14 72.4
MsG0680033401.01.T01 AT3G58960 30.052 193 121 4 60 246 1 185 9.84e-14 73.6
MsG0680033401.01.T01 AT3G56780 30.851 188 112 6 63 245 9 183 1.00e-13 73.6
MsG0680033401.01.T01 AT3G56780 30.851 188 112 6 63 245 9 183 1.59e-13 72.4
MsG0680033401.01.T01 AT3G58980 31.606 193 117 6 60 245 1 185 2.97e-13 72.4
MsG0680033401.01.T01 AT3G59000 32.778 180 98 6 60 224 1 172 4.00e-13 71.6
MsG0680033401.01.T01 AT5G56400 25.658 456 267 18 44 445 17 454 4.59e-13 71.2
MsG0680033401.01.T01 AT3G26922 31.606 193 110 7 61 245 14 192 5.30e-13 70.1
MsG0680033401.01.T01 AT3G26922 31.606 193 110 7 61 245 14 192 5.30e-13 70.1
MsG0680033401.01.T01 AT2G26030 30.366 191 116 7 61 245 4 183 5.67e-13 70.9
MsG0680033401.01.T01 AT2G26030 30.366 191 116 7 61 245 4 183 5.67e-13 70.9
MsG0680033401.01.T01 AT2G26030 30.366 191 116 7 61 245 4 183 5.76e-13 70.9
MsG0680033401.01.T01 AT4G14096 35.025 197 102 10 61 245 8 190 6.01e-13 70.9
MsG0680033401.01.T01 AT4G14096 35.025 197 102 10 61 245 8 190 6.01e-13 70.9
MsG0680033401.01.T01 AT5G44940 24.938 405 247 17 61 443 5 374 7.56e-13 70.1
MsG0680033401.01.T01 AT1G48400 30.348 201 119 7 56 245 5 195 1.07e-12 70.1
MsG0680033401.01.T01 AT1G48400 30.348 201 119 7 56 245 5 195 1.10e-12 70.1
MsG0680033401.01.T01 AT1G55660 33.161 193 115 7 60 245 52 237 1.28e-12 69.3
MsG0680033401.01.T01 AT4G09920 31.053 190 119 5 60 245 1 182 1.30e-12 68.9
MsG0680033401.01.T01 AT4G09920 31.053 190 119 5 60 245 1 182 1.30e-12 68.9
MsG0680033401.01.T01 AT1G55660 33.161 193 115 7 60 245 52 237 1.69e-12 69.7
MsG0680033401.01.T01 AT3G58860 30.612 196 122 6 58 245 4 193 1.94e-12 69.3
MsG0680033401.01.T01 AT4G09920 30.769 195 113 6 60 245 1 182 2.44e-12 67.8
MsG0680033401.01.T01 AT4G09920 30.769 195 113 6 60 245 1 182 2.44e-12 67.8
MsG0680033401.01.T01 AT4G09920 30.769 195 113 6 60 245 1 182 2.44e-12 67.8
MsG0680033401.01.T01 AT2G29930 30.890 191 120 4 61 249 12 192 2.84e-12 68.9
MsG0680033401.01.T01 AT2G29930 30.890 191 120 4 61 249 12 192 2.84e-12 68.9
MsG0680033401.01.T01 AT5G53640 27.749 191 116 4 61 245 22 196 3.11e-12 66.6
MsG0680033401.01.T01 AT1G05080 23.333 420 257 13 79 445 31 438 3.15e-12 68.6
MsG0680033401.01.T01 AT4G15060 30.000 200 127 4 52 245 17 209 3.94e-12 68.2
MsG0680033401.01.T01 AT1G78750 29.358 218 109 8 52 245 9 205 4.61e-12 68.2
MsG0680033401.01.T01 AT1G78750 29.358 218 109 8 52 245 9 205 4.61e-12 68.2
MsG0680033401.01.T01 AT5G56380 32.323 198 112 7 60 245 1 188 5.04e-12 68.2
MsG0680033401.01.T01 AT5G56380 32.323 198 112 7 60 245 1 188 5.04e-12 68.2
MsG0680033401.01.T01 AT3G52680 25.895 363 218 14 61 413 21 342 7.38e-12 67.0
MsG0680033401.01.T01 AT5G53635 30.319 188 118 5 63 246 2 180 7.57e-12 67.4
MsG0680033401.01.T01 AT1G58310 33.645 214 113 8 61 251 8 215 8.80e-12 67.4
MsG0680033401.01.T01 AT1G51370 24.711 433 253 16 61 441 19 430 1.26e-11 66.6
MsG0680033401.01.T01 AT5G22700 25.843 356 215 14 58 385 40 374 1.90e-11 66.2
MsG0680033401.01.T01 AT4G15060 29.744 195 124 4 57 245 168 355 2.05e-11 66.2
MsG0680033401.01.T01 AT5G22730 29.293 198 109 6 61 245 28 207 2.17e-11 66.2
MsG0680033401.01.T01 AT5G22730 29.293 198 109 6 61 245 28 207 2.17e-11 66.2
MsG0680033401.01.T01 AT5G22730 29.293 198 109 6 61 245 28 207 2.21e-11 65.9
MsG0680033401.01.T01 AT4G13960 32.995 197 110 8 60 245 1 186 2.44e-11 65.9
MsG0680033401.01.T01 AT4G13960 32.995 197 110 8 60 245 1 186 2.44e-11 65.9
MsG0680033401.01.T01 AT1G64540 32.796 186 104 7 63 245 7 174 2.54e-11 65.9
MsG0680033401.01.T01 AT1G64540 32.796 186 104 7 63 245 7 174 2.54e-11 65.9
MsG0680033401.01.T01 AT3G62440 28.986 207 127 5 60 250 1 203 2.62e-11 65.9
MsG0680033401.01.T01 AT3G44810 24.123 456 260 15 62 446 8 448 3.93e-11 65.1
MsG0680033401.01.T01 AT5G41630 30.435 207 109 8 61 245 12 205 4.33e-11 65.1
MsG0680033401.01.T01 AT3G58900 31.220 205 105 9 60 245 1 188 5.20e-11 64.3
MsG0680033401.01.T01 AT3G58900 31.220 205 105 9 60 245 1 188 5.20e-11 64.3
MsG0680033401.01.T01 AT3G58900 31.220 205 105 9 60 245 1 188 6.19e-11 63.9
MsG0680033401.01.T01 AT5G22610 27.363 201 132 4 61 254 18 211 6.23e-11 64.7
MsG0680033401.01.T01 AT5G22720 27.461 193 126 4 58 245 20 203 8.52e-11 64.3

Find 84 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTTAATCAACTTGTATA+AGG 0.185708 6:-64054765 None:intergenic
TCAAGTGTCGGTACGATTTC+TGG 0.206732 6:+64054399 MsG0680033401.01.T01:CDS
TAATTGAACTTCGACTATTT+TGG 0.213375 6:+64055289 MsG0680033401.01.T01:CDS
ACACATTCGGGAATTGTATA+TGG 0.248235 6:-64055540 None:intergenic
GTGCAATTTCTAACTGTAAC+AGG 0.287183 6:+64054830 MsG0680033401.01.T01:CDS
TTCGATCCATTGATTGATAC+TGG 0.287922 6:-64054435 None:intergenic
GTTGGTTGGCGAAGAAGGTT+GGG 0.291673 6:-64054095 None:intergenic
AAATCTAAAATCTGCTTCTA+TGG 0.297622 6:-64055604 None:intergenic
ATTGAAAGACTTTGTAGTTT+GGG 0.316509 6:-64055366 None:intergenic
AATATCTCTTACTGTGTGTT+GGG 0.320398 6:-64054118 None:intergenic
AAATCCGCTATAGAAGTAAT+TGG 0.335779 6:+64055670 MsG0680033401.01.T01:CDS
CACTTTGGATATCGTTGAAT+TGG 0.336757 6:-64054277 None:intergenic
AATTGAAAGACTTTGTAGTT+TGG 0.357804 6:-64055367 None:intergenic
GCTTTAATCAACTTGTATAA+GGG 0.364318 6:-64054764 None:intergenic
TTGGGGTTGGTTGGCGAAGA+AGG 0.364375 6:-64054100 None:intergenic
ATATGAATTGATTTCTTGAT+TGG 0.372343 6:-64055238 None:intergenic
CTCTTACTGTGTGTTGGGGT+TGG 0.373219 6:-64054113 None:intergenic
GGTTGGTTGGCGAAGAAGGT+TGG 0.373396 6:-64054096 None:intergenic
TTTGTAGTTTGGGACAATAA+TGG 0.396867 6:-64055356 None:intergenic
GAATATCTCTTACTGTGTGT+TGG 0.398701 6:-64054119 None:intergenic
GTTCTGAAAGCGTCTTTGAT+TGG 0.402538 6:-64054203 None:intergenic
TATGAATTGATTTCTTGATT+GGG 0.408255 6:-64055237 None:intergenic
TTGATCATTGCATTCATGAT+TGG 0.409141 6:+64055313 MsG0680033401.01.T01:CDS
TAAATGTGATGAAACACATT+CGG 0.420317 6:-64055553 None:intergenic
TTTCCAATCTTCAATGACTT+TGG 0.423956 6:-64055514 None:intergenic
TCATCTGAGTGATGTTTGTT+TGG 0.425779 6:+64054625 MsG0680033401.01.T01:CDS
ATCCGGGTGTCCCATGTTAG+AGG 0.427480 6:+64054676 MsG0680033401.01.T01:CDS
TTGGTTGGCGAAGAAGGTTG+GGG 0.431904 6:-64054094 None:intergenic
TACTGTGTGTTGGGGTTGGT+TGG 0.448158 6:-64054109 None:intergenic
TCACATCAAGTGTCGGGGTT+GGG 0.450252 6:+64054717 MsG0680033401.01.T01:CDS
CATATGTCACATCAAGTGTC+GGG 0.450423 6:+64054711 MsG0680033401.01.T01:CDS
GACCCACCTCTTTGAAAGAA+TGG 0.452124 6:-64054228 None:intergenic
AAATGTGATGAAACACATTC+GGG 0.452197 6:-64055552 None:intergenic
CTACCAAAGTCATTGAAGAT+TGG 0.453055 6:+64055511 MsG0680033401.01.T01:CDS
GGATTTGAGTGTCTGTTGTT+GGG 0.457690 6:-64054369 None:intergenic
AACGTCGAATAAACGAATAT+TGG 0.459449 6:-64054786 None:intergenic
GATTTAAAGAAACTTATATC+CGG 0.461392 6:+64054659 MsG0680033401.01.T01:CDS
CGATTTCGTTCACGCCACTT+TGG 0.463659 6:-64054292 None:intergenic
TATAAATGACAGGTTACATC+CGG 0.463776 6:-64055751 None:intergenic
TAGAAGTAATTGGAATTCAA+TGG 0.463941 6:+64055680 MsG0680033401.01.T01:CDS
AGGATTTGAGTGTCTGTTGT+TGG 0.464862 6:-64054370 None:intergenic
ACTATTCCAGTATCAATCAA+TGG 0.467254 6:+64054429 MsG0680033401.01.T01:CDS
ACAAAGTCTTTCAATTTCAA+AGG 0.484316 6:+64055374 MsG0680033401.01.T01:CDS
TGTCTCTGATGACAGTGGAC+AGG 0.486498 6:+64055480 MsG0680033401.01.T01:intron
ATGAATTGATTTCTTGATTG+GGG 0.487037 6:-64055236 None:intergenic
GTCGGGGTTGGGATTACAGC+TGG 0.497800 6:+64054728 MsG0680033401.01.T01:CDS
CACATTCGGGAATTGTATAT+GGG 0.497936 6:-64055539 None:intergenic
TTGCATTCATGATTGGTATG+AGG 0.499072 6:+64055320 MsG0680033401.01.T01:CDS
TTACATCCGGGAGAGATCCT+TGG 0.504647 6:-64055738 None:intergenic
ATCCTCTAACATGGGACACC+CGG 0.506662 6:-64054678 None:intergenic
AAGATTTATTCTCCTATCCA+AGG 0.514060 6:+64055721 MsG0680033401.01.T01:CDS
GTCACATCAAGTGTCGGGGT+TGG 0.518820 6:+64054716 MsG0680033401.01.T01:CDS
GATGAACTTCTGTAAAATGT+TGG 0.527987 6:+64054322 MsG0680033401.01.T01:CDS
TCCTATCCAAGGATCTCTCC+CGG 0.535461 6:+64055732 MsG0680033401.01.T01:CDS
GAACTACCATTCTTTCAAAG+AGG 0.537018 6:+64054222 MsG0680033401.01.T01:CDS
CTACCATTCTTTCAAAGAGG+TGG 0.537737 6:+64054225 MsG0680033401.01.T01:CDS
ATTTAAAGAAACTTATATCC+GGG 0.547410 6:+64054660 MsG0680033401.01.T01:CDS
AGTATAGAAGCGATCTATTG+AGG 0.549813 6:-64054049 None:intergenic
TACCATTCTTTCAAAGAGGT+GGG 0.550479 6:+64054226 MsG0680033401.01.T01:CDS
TGTGACTTAGTATGTCGTCT+TGG 0.563498 6:-64054166 None:intergenic
AATTCCAATTACTTCTATAG+CGG 0.568661 6:-64055674 None:intergenic
TGTTTGTTTGGTTGATATCG+AGG 0.573126 6:+64054637 MsG0680033401.01.T01:CDS
ATATCTCTTACTGTGTGTTG+GGG 0.579343 6:-64054117 None:intergenic
TGCAATTTCTAACTGTAACA+GGG 0.580241 6:+64054831 MsG0680033401.01.T01:CDS
GAAACATTCATATAAATGAC+AGG 0.580365 6:-64055761 None:intergenic
GCATATGTCACATCAAGTGT+CGG 0.582260 6:+64054710 MsG0680033401.01.T01:CDS
GCTTCTATACTCAACGCCAA+TGG 0.582437 6:+64054061 MsG0680033401.01.T01:CDS
AACAGCAATACGTCGACACG+TGG 0.584263 6:+64054457 MsG0680033401.01.T01:CDS
TTTCTGCTGTAAAACACTCG+TGG 0.591783 6:+64054529 MsG0680033401.01.T01:CDS
AGTGTCTGTTGTTGGGCGCG+TGG 0.594054 6:-64054362 None:intergenic
TACAGTTAGAAATTGCACAT+TGG 0.602369 6:-64054825 None:intergenic
AGCAATACGTCGACACGTGG+AGG 0.613366 6:+64054460 MsG0680033401.01.T01:CDS
AATCCTTTCATCTCAAGTGT+CGG 0.619851 6:+64054387 MsG0680033401.01.T01:CDS
GAAATCAATTCATATTACAA+AGG 0.621488 6:+64055246 MsG0680033401.01.T01:CDS
CAATTCAACGATATCCAAAG+TGG 0.623927 6:+64054278 MsG0680033401.01.T01:CDS
GCGTGAACGAAATCGAGTCA+TGG 0.624337 6:+64054300 MsG0680033401.01.T01:CDS
TCCGGGAGAGATCCTTGGAT+AGG 0.627628 6:-64055733 None:intergenic
GCAATTTCTAACTGTAACAG+GGG 0.628391 6:+64054832 MsG0680033401.01.T01:CDS
GTACCGACACTTGAGATGAA+AGG 0.639373 6:-64054390 None:intergenic
ATAAATGACAGGTTACATCC+GGG 0.661899 6:-64055750 None:intergenic
GGGGTTGGGATTACAGCTGG+AGG 0.680101 6:+64054731 MsG0680033401.01.T01:CDS
ATATGTCACATCAAGTGTCG+GGG 0.697715 6:+64054712 MsG0680033401.01.T01:CDS
ACATTGGAAACTGCTCTGAG+CGG 0.715303 6:-64054809 None:intergenic
GCAGACGTCAAAGTCACACG+TGG 0.772254 6:-64054503 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTGATGTTAAAAG+AGG - Chr6:64054891-64054910 None:intergenic 15.0%
!! TTCAAAAATGTTTATACATA+TGG - Chr6:64054947-64054966 None:intergenic 15.0%
!!! AGAATAAATCTTCTAAAAAT+TGG - Chr6:64055713-64055732 None:intergenic 15.0%
!! ATTTAAAGAAACTTATATCC+GGG + Chr6:64054660-64054679 MsG0680033401.01.T01:CDS 20.0%
!! GAAATCAATTCATATTACAA+AGG + Chr6:64055246-64055265 MsG0680033401.01.T01:CDS 20.0%
!! GATTTAAAGAAACTTATATC+CGG + Chr6:64054659-64054678 MsG0680033401.01.T01:CDS 20.0%
!! TAAAAATCTTATAGCTCATA+TGG + Chr6:64055054-64055073 MsG0680033401.01.T01:intron 20.0%
!!! AAGATTTTTATAAGACAACT+CGG - Chr6:64055044-64055063 None:intergenic 20.0%
!!! ATATGAATTGATTTCTTGAT+TGG - Chr6:64055241-64055260 None:intergenic 20.0%
!!! TATGAATTGATTTCTTGATT+GGG - Chr6:64055240-64055259 None:intergenic 20.0%
!!! TATTTTTTTTTTTGGCAGAT+GGG + Chr6:64055204-64055223 MsG0680033401.01.T01:intron 20.0%
! AATTCCAATTACTTCTATAG+CGG - Chr6:64055677-64055696 None:intergenic 25.0%
! AATTGAAAGACTTTGTAGTT+TGG - Chr6:64055370-64055389 None:intergenic 25.0%
! ACAAAGTCATAGATCATATT+TGG - Chr6:64055168-64055187 None:intergenic 25.0%
! ACAAAGTCTTTCAATTTCAA+AGG + Chr6:64055374-64055393 MsG0680033401.01.T01:CDS 25.0%
! ATATGATCTATGACTTTGTT+TGG + Chr6:64055169-64055188 MsG0680033401.01.T01:intron 25.0%
! ATTGAAAGACTTTGTAGTTT+GGG - Chr6:64055369-64055388 None:intergenic 25.0%
! GCTTTAATCAACTTGTATAA+GGG - Chr6:64054767-64054786 None:intergenic 25.0%
! TAAATGTGATGAAACACATT+CGG - Chr6:64055556-64055575 None:intergenic 25.0%
! TAGAAGTAATTGGAATTCAA+TGG + Chr6:64055680-64055699 MsG0680033401.01.T01:CDS 25.0%
! TTTCAATTTCAAAGGTTTGT+TGG + Chr6:64055382-64055401 MsG0680033401.01.T01:intron 25.0%
!! AAATCTAAAATCTGCTTCTA+TGG - Chr6:64055607-64055626 None:intergenic 25.0%
!! ATGAATTGATTTCTTGATTG+GGG - Chr6:64055239-64055258 None:intergenic 25.0%
!! CAATTAAGTTTTCAAACACA+GGG - Chr6:64055275-64055294 None:intergenic 25.0%
!! TAATTGAACTTCGACTATTT+TGG + Chr6:64055289-64055308 MsG0680033401.01.T01:CDS 25.0%
!! TCAATTAAGTTTTCAAACAC+AGG - Chr6:64055276-64055295 None:intergenic 25.0%
!!! AAACTATTTTAGAGAGTTCA+GGG + Chr6:64054965-64054984 MsG0680033401.01.T01:intron 25.0%
!!! ATATTTTTATGTGTCTGTTG+TGG + Chr6:64054903-64054922 MsG0680033401.01.T01:intron 25.0%
!!! ATTTTTTTTTTTGGCAGATG+GGG + Chr6:64055205-64055224 MsG0680033401.01.T01:intron 25.0%
!!! GAATAGTTATTGGTTTATGT+TGG + Chr6:64055415-64055434 MsG0680033401.01.T01:intron 25.0%
!!! GTATTTTTTTTTTTGGCAGA+TGG + Chr6:64055203-64055222 MsG0680033401.01.T01:intron 25.0%
AAATCCGCTATAGAAGTAAT+TGG + Chr6:64055670-64055689 MsG0680033401.01.T01:CDS 30.0%
AAATGTGATGAAACACATTC+GGG - Chr6:64055555-64055574 None:intergenic 30.0%
AACGTCGAATAAACGAATAT+TGG - Chr6:64054789-64054808 None:intergenic 30.0%
AAGATTTATTCTCCTATCCA+AGG + Chr6:64055721-64055740 MsG0680033401.01.T01:CDS 30.0%
AATATCTCTTACTGTGTGTT+GGG - Chr6:64054121-64054140 None:intergenic 30.0%
ACTATTCCAGTATCAATCAA+TGG + Chr6:64054429-64054448 MsG0680033401.01.T01:CDS 30.0%
GATGAACTTCTGTAAAATGT+TGG + Chr6:64054322-64054341 MsG0680033401.01.T01:CDS 30.0%
TACAGTTAGAAATTGCACAT+TGG - Chr6:64054828-64054847 None:intergenic 30.0%
TATAAATGACAGGTTACATC+CGG - Chr6:64055754-64055773 None:intergenic 30.0%
TGCAATTTCTAACTGTAACA+GGG + Chr6:64054831-64054850 MsG0680033401.01.T01:CDS 30.0%
TTGATCATTGCATTCATGAT+TGG + Chr6:64055313-64055332 MsG0680033401.01.T01:CDS 30.0%
TTTCCAATCTTCAATGACTT+TGG - Chr6:64055517-64055536 None:intergenic 30.0%
! AGTTTTCAAATCCTCTAACA+TGG - Chr6:64054690-64054709 None:intergenic 30.0%
! GGCTTTAATCAACTTGTATA+AGG - Chr6:64054768-64054787 None:intergenic 30.0%
! GTTTTCAAATCCTCTAACAT+GGG - Chr6:64054689-64054708 None:intergenic 30.0%
! TCACGTTGATGAATAGTTAT+TGG + Chr6:64055405-64055424 MsG0680033401.01.T01:intron 30.0%
! TTTGTAGTTTGGGACAATAA+TGG - Chr6:64055359-64055378 None:intergenic 30.0%
!! GAAACTATTTTAGAGAGTTC+AGG + Chr6:64054964-64054983 MsG0680033401.01.T01:intron 30.0%
AATCCTTTCATCTCAAGTGT+CGG + Chr6:64054387-64054406 MsG0680033401.01.T01:CDS 35.0%
ACACATTCGGGAATTGTATA+TGG - Chr6:64055543-64055562 None:intergenic 35.0%
ACTGTCATCAGAGACAAAAA+AGG - Chr6:64055476-64055495 None:intergenic 35.0%
AGTATAGAAGCGATCTATTG+AGG - Chr6:64054052-64054071 None:intergenic 35.0%
ATAAATGACAGGTTACATCC+GGG - Chr6:64055753-64055772 None:intergenic 35.0%
ATATCTCTTACTGTGTGTTG+GGG - Chr6:64054120-64054139 None:intergenic 35.0%
CAATTCAACGATATCCAAAG+TGG + Chr6:64054278-64054297 MsG0680033401.01.T01:CDS 35.0%
CACATTCGGGAATTGTATAT+GGG - Chr6:64055542-64055561 None:intergenic 35.0%
CACTTTGGATATCGTTGAAT+TGG - Chr6:64054280-64054299 None:intergenic 35.0%
CTACCAAAGTCATTGAAGAT+TGG + Chr6:64055511-64055530 MsG0680033401.01.T01:CDS 35.0%
GAACTACCATTCTTTCAAAG+AGG + Chr6:64054222-64054241 MsG0680033401.01.T01:CDS 35.0%
GAATATCTCTTACTGTGTGT+TGG - Chr6:64054122-64054141 None:intergenic 35.0%
GCAATTTCTAACTGTAACAG+GGG + Chr6:64054832-64054851 MsG0680033401.01.T01:CDS 35.0%
GTGCAATTTCTAACTGTAAC+AGG + Chr6:64054830-64054849 MsG0680033401.01.T01:CDS 35.0%
TACCATTCTTTCAAAGAGGT+GGG + Chr6:64054226-64054245 MsG0680033401.01.T01:CDS 35.0%
TCATCTGAGTGATGTTTGTT+TGG + Chr6:64054625-64054644 MsG0680033401.01.T01:CDS 35.0%
TTGCATTCATGATTGGTATG+AGG + Chr6:64055320-64055339 MsG0680033401.01.T01:CDS 35.0%
! AGAGTGAGAGTAGAATTTTG+AGG - Chr6:64054002-64054021 None:intergenic 35.0%
! GCAAAATGCAAGACTTTTAC+AGG + Chr6:64055641-64055660 MsG0680033401.01.T01:CDS 35.0%
! TGCAAGACTTTTACAGGTTA+TGG + Chr6:64055647-64055666 MsG0680033401.01.T01:CDS 35.0%
! TGTTTGTTTGGTTGATATCG+AGG + Chr6:64054637-64054656 MsG0680033401.01.T01:CDS 35.0%
! TTCGATCCATTGATTGATAC+TGG - Chr6:64054438-64054457 None:intergenic 35.0%
!! AGATGAAGCGTTTTAAGTAC+AGG - Chr6:64054611-64054630 None:intergenic 35.0%
!!! TTTTTTGTCTCTGATGACAG+TGG + Chr6:64055475-64055494 MsG0680033401.01.T01:intron 35.0%
AGGATTTGAGTGTCTGTTGT+TGG - Chr6:64054373-64054392 None:intergenic 40.0%
CATATGTCACATCAAGTGTC+GGG + Chr6:64054711-64054730 MsG0680033401.01.T01:CDS 40.0%
CTACCATTCTTTCAAAGAGG+TGG + Chr6:64054225-64054244 MsG0680033401.01.T01:CDS 40.0%
GCATATGTCACATCAAGTGT+CGG + Chr6:64054710-64054729 MsG0680033401.01.T01:CDS 40.0%
GGATTTGAGTGTCTGTTGTT+GGG - Chr6:64054372-64054391 None:intergenic 40.0%
TGTGACTTAGTATGTCGTCT+TGG - Chr6:64054169-64054188 None:intergenic 40.0%
TTTCTGCTGTAAAACACTCG+TGG + Chr6:64054529-64054548 MsG0680033401.01.T01:CDS 40.0%
! ATATGTCACATCAAGTGTCG+GGG + Chr6:64054712-64054731 MsG0680033401.01.T01:CDS 40.0%
! TTGGGGATGTTTTCTTCCAT+TGG - Chr6:64054080-64054099 None:intergenic 40.0%
!! GTTCTGAAAGCGTCTTTGAT+TGG - Chr6:64054206-64054225 None:intergenic 40.0%
GCTTCTATACTCAACGCCAA+TGG + Chr6:64054061-64054080 MsG0680033401.01.T01:CDS 45.0%
! ACATTGGAAACTGCTCTGAG+CGG - Chr6:64054812-64054831 None:intergenic 45.0%
! GACCCACCTCTTTGAAAGAA+TGG - Chr6:64054231-64054250 None:intergenic 45.0%
! GTACCGACACTTGAGATGAA+AGG - Chr6:64054393-64054412 None:intergenic 45.0%
!! TCAAGTGTCGGTACGATTTC+TGG + Chr6:64054399-64054418 MsG0680033401.01.T01:CDS 45.0%
!!! ATAATATGTATTTTTTTTTT+TGG + Chr6:64055196-64055215 MsG0680033401.01.T01:intron 5.0%
AACAGCAATACGTCGACACG+TGG + Chr6:64054457-64054476 MsG0680033401.01.T01:CDS 50.0%
ATCCTCTAACATGGGACACC+CGG - Chr6:64054681-64054700 None:intergenic 50.0%
CGATTTCGTTCACGCCACTT+TGG - Chr6:64054295-64054314 None:intergenic 50.0%
CTCTTACTGTGTGTTGGGGT+TGG - Chr6:64054116-64054135 None:intergenic 50.0%
GCGTGAACGAAATCGAGTCA+TGG + Chr6:64054300-64054319 MsG0680033401.01.T01:CDS 50.0%
GTTGGTTGGCGAAGAAGGTT+GGG - Chr6:64054098-64054117 None:intergenic 50.0%
TCCTATCCAAGGATCTCTCC+CGG + Chr6:64055732-64055751 MsG0680033401.01.T01:CDS 50.0%
TGTCTCTGATGACAGTGGAC+AGG + Chr6:64055480-64055499 MsG0680033401.01.T01:intron 50.0%
TTACATCCGGGAGAGATCCT+TGG - Chr6:64055741-64055760 None:intergenic 50.0%
TTGGTTGGCGAAGAAGGTTG+GGG - Chr6:64054097-64054116 None:intergenic 50.0%
! TACTGTGTGTTGGGGTTGGT+TGG - Chr6:64054112-64054131 None:intergenic 50.0%
!! TCACATCAAGTGTCGGGGTT+GGG + Chr6:64054717-64054736 MsG0680033401.01.T01:CDS 50.0%
AGCAATACGTCGACACGTGG+AGG + Chr6:64054460-64054479 MsG0680033401.01.T01:CDS 55.0%
ATCCGGGTGTCCCATGTTAG+AGG + Chr6:64054676-64054695 MsG0680033401.01.T01:CDS 55.0%
GCAGACGTCAAAGTCACACG+TGG - Chr6:64054506-64054525 None:intergenic 55.0%
TCCGGGAGAGATCCTTGGAT+AGG - Chr6:64055736-64055755 None:intergenic 55.0%
! GGTTGGTTGGCGAAGAAGGT+TGG - Chr6:64054099-64054118 None:intergenic 55.0%
!! GTCACATCAAGTGTCGGGGT+TGG + Chr6:64054716-64054735 MsG0680033401.01.T01:CDS 55.0%
!! TTGGGGTTGGTTGGCGAAGA+AGG - Chr6:64054103-64054122 None:intergenic 55.0%
AGTGTCTGTTGTTGGGCGCG+TGG - Chr6:64054365-64054384 None:intergenic 60.0%
GGGGTTGGGATTACAGCTGG+AGG + Chr6:64054731-64054750 MsG0680033401.01.T01:CDS 60.0%
GTCGGGGTTGGGATTACAGC+TGG + Chr6:64054728-64054747 MsG0680033401.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 64053969 64055776 64053969 ID=MsG0680033401.01;Name=MsG0680033401.01
Chr6 mRNA 64053969 64055776 64053969 ID=MsG0680033401.01.T01;Parent=MsG0680033401.01;Name=MsG0680033401.01.T01;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|446
Chr6 exon 64053969 64054853 64053969 ID=MsG0680033401.01.T01:exon:4047;Parent=MsG0680033401.01.T01
Chr6 exon 64055222 64055395 64055222 ID=MsG0680033401.01.T01:exon:4046;Parent=MsG0680033401.01.T01
Chr6 exon 64055495 64055776 64055495 ID=MsG0680033401.01.T01:exon:4045;Parent=MsG0680033401.01.T01
Chr6 CDS 64053969 64054853 64053969 ID=MsG0680033401.01.T01:cds;Parent=MsG0680033401.01.T01
Chr6 CDS 64055222 64055395 64055222 ID=MsG0680033401.01.T01:cds;Parent=MsG0680033401.01.T01
Chr6 CDS 64055495 64055776 64055495 ID=MsG0680033401.01.T01:cds;Parent=MsG0680033401.01.T01
Gene Sequence

>MsG0680033401.01.T01

TTGATAAAACTAAAAACAGAGAATCTATTTCCTCAAAATTCTACTCTCACTCTTCATTGTAGTCATCAATTCAGATCTGACCTCAATAGATCGCTTCTATACTCAACGCCAATGGAAGAAAACATCCCCAACCTTCTTCGCCAACCAACCCCAACACACAGTAAGAGATATTCAAGAGTAGATTCTCTCAACGACTTCCAAGACGACATACTAAGTCACATTCTCTCTTTTCTTCCAATCAAAGACGCTTTCAGAACTACCATTCTTTCAAAGAGGTGGGTCTCATTATGTCACTCACGTGCTGTTCACCAATTCAACGATATCCAAAGTGGCGTGAACGAAATCGAGTCATGGATGAACTTCTGTAAAATGTTGGATGCAATCTTACTCTCACCACGCGCCCAACAACAGACACTCAAATCCTTTCATCTCAAGTGTCGGTACGATTTCTGGCAGTTTGACTATTCCAGTATCAATCAATGGATCGAAACAGCAATACGTCGACACGTGGAGGATCTCTCTCTATTCTTGTTACCACGTGTGACTTTGACGTCTGCTATTTTCTGCTGTAAAACACTCGTGGAGTTGAATTTAACAAACTTACTTGTCGCAACTATGTCTGATTGTTCTGTTCATCTTCCTGTACTTAAAACGCTTCATCTGAGTGATGTTTGTTTGGTTGATATCGAGGATTTAAAGAAACTTATATCCGGGTGTCCCATGTTAGAGGATTTGAAAACTGCATATGTCACATCAAGTGTCGGGGTTGGGATTACAGCTGGAGGCTACGCTAAACCCTTATACAAGTTGATTAAAGCCAATATTCGTTTATTCGACGTTCCGCTCAGAGCAGTTTCCAATGTGCAATTTCTAACTGTAACAGGGATGGGGCAAAGTCTCCCCAATCAAGAAATCAATTCATATTACAAAGGCTGCCCTGTGTTTGAAAACTTAATTGAACTTCGACTATTTTGGTTTGATCATTGCATTCATGATTGGTATGAGGTAGTGCAAATGCTCCATTATTGTCCCAAACTACAAAGTCTTTCAATTTCAAAGTGGACAGGTTTATCAACTACCAAAGTCATTGAAGATTGGAAATACCCATATACAATTCCCGAATGTGTTTCATCACATTTAACAACATGCAAAATTTTAGACTATCATGCCATAGAAGCAGATTTTAGATTTGTAACATATATTTTGCAAAATGCAAGACTTTTACAGGTTATGGAAATCCGCTATAGAAGTAATTGGAATTCAATGGAAAATCTCCAATTTTTAGAAGATTTATTCTCCTATCCAAGGATCTCTCCCGGATGTAACCTGTCATTTATATGA
Protein sequence

>MsG0680033401.01.T01

LIKLKTENLFPQNSTLTLHCSHQFRSDLNRSLLYSTPMEENIPNLLRQPTPTHSKRYSRVDSLNDFQDDILSHILSFLPIKDAFRTTILSKRWVSLCHSRAVHQFNDIQSGVNEIESWMNFCKMLDAILLSPRAQQQTLKSFHLKCRYDFWQFDYSSINQWIETAIRRHVEDLSLFLLPRVTLTSAIFCCKTLVELNLTNLLVATMSDCSVHLPVLKTLHLSDVCLVDIEDLKKLISGCPMLEDLKTAYVTSSVGVGITAGGYAKPLYKLIKANIRLFDVPLRAVSNVQFLTVTGMGQSLPNQEINSYYKGCPVFENLIELRLFWFDHCIHDWYEVVQMLHYCPKLQSLSISKWTGLSTTKVIEDWKYPYTIPECVSSHLTTCKILDYHAIEADFRFVTYILQNARLLQVMEIRYRSNWNSMENLQFLEDLFSYPRISPGCNLSFI*