AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035322.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035322.01.T01 MTR_6g081410 97.386 153 4 0 1 153 1 153 8.93e-98 295
MsG0680035322.01.T01 MTR_6g081410 79.646 113 11 2 161 272 302 403 4.64e-43 153
MsG0680035322.01.T01 MTR_6g081780 92.810 153 11 0 1 153 1 153 1.51e-94 287
MsG0680035322.01.T01 MTR_6g081780 69.027 113 23 2 161 272 302 403 1.61e-38 141
MsG0680035322.01.T01 MTR_6g081810 87.097 155 18 1 1 153 1 155 5.92e-89 272
MsG0680035322.01.T01 MTR_6g081810 69.912 113 22 2 161 272 276 377 5.23e-35 131
MsG0680035322.01.T01 MTR_6g066380 80.000 155 29 1 1 153 1 155 5.00e-78 244
MsG0680035322.01.T01 MTR_6g066380 67.257 113 25 2 161 272 304 405 1.06e-33 128
MsG0680035322.01.T01 MTR_1g108810 54.762 168 61 2 3 164 6 164 7.88e-58 192
MsG0680035322.01.T01 MTR_1g108810 52.542 118 41 3 159 272 304 410 1.11e-28 114
MsG0680035322.01.T01 MTR_8g106670 63.704 135 49 0 16 150 3 137 3.31e-51 175
MsG0680035322.01.T01 MTR_8g106670 34.158 202 103 7 80 272 208 388 2.48e-23 99.4
MsG0680035322.01.T01 MTR_6g081300 56.061 132 58 0 20 151 5 136 8.73e-43 152
MsG0680035322.01.T01 MTR_6g081300 38.793 116 53 3 161 272 285 386 2.06e-17 82.0
MsG0680035322.01.T01 MTR_6g081390 51.111 135 65 1 20 153 7 141 7.42e-40 144
MsG0680035322.01.T01 MTR_6g081390 58.036 112 35 2 161 271 288 388 3.12e-28 113
MsG0680035322.01.T01 MTR_1g108840 46.452 155 74 1 10 164 26 171 2.59e-39 143
MsG0680035322.01.T01 MTR_1g108840 38.938 113 57 2 161 272 316 417 2.48e-18 85.1
MsG0680035322.01.T01 MTR_6g081400 51.880 133 63 1 20 151 10 142 4.34e-39 142
MsG0680035322.01.T01 MTR_6g081400 52.679 112 41 2 161 271 291 391 1.67e-26 108
MsG0680035322.01.T01 MTR_6g081240 50.746 134 64 2 19 151 4 136 5.31e-39 142
MsG0680035322.01.T01 MTR_6g081240 41.593 113 54 2 161 272 285 386 2.20e-17 82.0
MsG0680035322.01.T01 MTR_6g081310 52.632 133 48 2 20 151 5 123 3.74e-35 132
MsG0680035322.01.T01 MTR_6g081310 45.133 113 50 2 161 272 283 384 4.36e-19 87.0
MsG0680035322.01.T01 MTR_1g109060 44.521 146 76 1 13 153 7 152 9.83e-34 128
MsG0680035322.01.T01 MTR_1g109060 38.938 113 57 2 161 272 299 400 2.06e-15 76.3
MsG0680035322.01.T01 MTR_1g109060 44.521 146 76 1 13 153 7 152 1.09e-33 128
MsG0680035322.01.T01 MTR_1g109060 38.938 113 57 2 161 272 299 400 2.21e-15 76.3
MsG0680035322.01.T01 MTR_7g082810 40.964 166 86 2 9 171 1 157 4.26e-32 124
MsG0680035322.01.T01 MTR_7g082810 41.284 109 52 2 163 270 297 394 5.09e-17 80.9
MsG0680035322.01.T01 MTR_1g108990 51.908 131 63 0 23 153 23 153 2.16e-30 119
MsG0680035322.01.T01 MTR_1g108990 42.478 113 53 2 161 272 300 401 6.32e-19 86.7
MsG0680035322.01.T01 MTR_6g004220 41.497 147 81 2 5 150 14 156 4.43e-30 115
MsG0680035322.01.T01 MTR_3g111020 38.889 144 84 1 10 149 32 175 8.08e-30 118
MsG0680035322.01.T01 MTR_6g004220 41.497 147 81 2 5 150 14 156 2.22e-29 115
MsG0680035322.01.T01 MTR_6g004220 45.055 91 49 1 161 250 306 396 7.53e-17 80.5
MsG0680035322.01.T01 MTR_6g004220 41.497 147 81 2 5 150 14 156 3.44e-29 115
MsG0680035322.01.T01 MTR_6g004220 41.593 113 54 2 161 272 306 407 2.56e-18 84.7
MsG0680035322.01.T01 MTR_6g004220 41.497 147 81 2 5 150 7 149 4.10e-29 115
MsG0680035322.01.T01 MTR_6g004220 41.593 113 54 2 161 272 299 400 3.46e-18 84.3
MsG0680035322.01.T01 MTR_2g078960 43.046 151 85 1 4 153 11 161 4.18e-29 115
MsG0680035322.01.T01 MTR_2g078960 33.333 189 95 9 98 272 238 409 1.28e-12 67.8
MsG0680035322.01.T01 MTR_2g078930 40.994 161 84 1 4 153 11 171 5.53e-29 115
MsG0680035322.01.T01 MTR_2g078930 37.190 121 48 4 161 272 318 419 2.30e-13 70.1
MsG0680035322.01.T01 MTR_5g067460 40.310 129 77 0 21 149 51 179 3.74e-28 113
MsG0680035322.01.T01 MTR_1g101500 38.028 142 88 0 8 149 47 188 4.30e-28 113
MsG0680035322.01.T01 MTR_2g078970 40.828 169 89 2 14 171 13 181 6.72e-28 112
MsG0680035322.01.T01 MTR_2g078970 27.511 229 127 8 57 272 205 407 7.33e-11 62.8
MsG0680035322.01.T01 MTR_5g010830 36.735 147 91 1 5 149 43 189 9.53e-28 112
MsG0680035322.01.T01 MTR_2g079020 41.060 151 82 1 10 153 15 165 5.09e-27 110
MsG0680035322.01.T01 MTR_2g079020 37.168 113 59 2 161 272 312 413 1.79e-13 70.5
MsG0680035322.01.T01 MTR_0039s0080 36.184 152 94 1 1 149 11 162 8.32e-26 106
MsG0680035322.01.T01 MTR_7g087400 38.571 140 84 2 10 148 15 153 1.17e-25 105
MsG0680035322.01.T01 MTR_2g022980 34.545 165 90 3 3 149 8 172 9.01e-25 103
MsG0680035322.01.T01 MTR_2g022980 37.500 112 50 3 166 272 328 424 3.38e-13 69.7
MsG0680035322.01.T01 MTR_8g102430 34.266 143 93 1 7 149 6 147 9.93e-25 103
MsG0680035322.01.T01 MTR_6g043810 32.847 137 90 2 15 150 23 158 1.88e-24 102
MsG0680035322.01.T01 MTR_6g043810 32.847 137 90 2 15 150 13 148 1.90e-24 102
MsG0680035322.01.T01 MTR_5g032720 36.571 175 101 2 6 179 16 181 2.58e-24 102
MsG0680035322.01.T01 MTR_1g100180 38.194 144 86 2 11 153 30 171 8.39e-24 100
MsG0680035322.01.T01 MTR_5g032750 36.250 160 92 2 6 164 16 166 9.45e-24 100
MsG0680035322.01.T01 MTR_5g033100 32.367 207 118 3 15 216 46 235 2.39e-23 99.8
MsG0680035322.01.T01 MTR_7g087410 40.260 154 79 3 21 172 27 169 3.09e-23 99.0
MsG0680035322.01.T01 MTR_4g048000 39.669 121 73 0 26 146 65 185 5.40e-23 98.6
MsG0680035322.01.T01 MTR_4g048000 38.053 113 58 2 161 272 339 440 1.36e-14 73.9
MsG0680035322.01.T01 MTR_6g088805 31.757 148 97 1 2 149 8 151 6.00e-23 98.2
MsG0680035322.01.T01 MTR_1g021740 34.483 174 95 4 1 164 1 165 8.03e-23 97.8
MsG0680035322.01.T01 MTR_6g027200 39.437 142 81 3 10 148 21 160 2.00e-22 96.7
MsG0680035322.01.T01 MTR_6g047610 30.918 207 124 4 3 201 1 196 3.88e-22 95.9
MsG0680035322.01.T01 MTR_3g099720 33.728 169 97 4 6 168 16 175 4.61e-22 95.9
MsG0680035322.01.T01 MTR_2g088400 36.290 124 79 0 26 149 53 176 2.82e-21 93.2
MsG0680035322.01.T01 MTR_2g088400 35.398 113 61 2 161 272 327 428 9.25e-13 68.2
MsG0680035322.01.T01 MTR_2g088400 36.290 124 79 0 26 149 53 176 3.72e-21 93.2
MsG0680035322.01.T01 MTR_2g088400 35.398 113 61 2 161 272 327 428 1.81e-12 67.4
MsG0680035322.01.T01 MTR_6g027190 39.583 144 82 2 10 150 9 150 4.45e-21 92.8
MsG0680035322.01.T01 MTR_6g047640 29.952 207 127 3 3 201 1 197 1.91e-20 90.9
MsG0680035322.01.T01 MTR_6g047640 29.952 207 127 3 3 201 1 197 2.19e-20 90.9
MsG0680035322.01.T01 MTR_6g047590 33.333 156 95 2 3 150 1 155 4.81e-20 89.7
MsG0680035322.01.T01 MTR_3g099700 32.164 171 105 3 10 179 31 191 1.86e-19 88.2
MsG0680035322.01.T01 MTR_8g069470 37.671 146 78 3 21 164 46 180 2.06e-19 88.2
MsG0680035322.01.T01 MTR_8g069470 32.593 135 76 3 138 271 304 424 5.16e-12 66.2
MsG0680035322.01.T01 MTR_2g435930 26.027 146 108 0 7 152 1 146 3.67e-19 87.4
MsG0680035322.01.T01 MTR_5g011540 36.170 141 90 0 9 149 27 167 7.30e-19 86.7
MsG0680035322.01.T01 MTR_4g027920 35.200 125 81 0 25 149 156 280 1.07e-18 86.3
MsG0680035322.01.T01 MTR_8g063590 39.231 130 78 1 22 150 49 178 1.25e-18 85.9
MsG0680035322.01.T01 MTR_8g063590 32.512 203 110 8 78 272 247 430 3.19e-13 69.7
MsG0680035322.01.T01 MTR_5g090290 32.727 165 103 3 9 165 26 190 2.09e-18 85.1
MsG0680035322.01.T01 MTR_5g090290 34.545 110 56 3 166 272 326 422 3.96e-12 66.6
MsG0680035322.01.T01 MTR_7g082800 39.823 113 56 2 161 272 217 318 4.39e-15 75.1
MsG0680035322.01.T01 MTR_7g082800 41.791 67 39 0 84 150 1 67 5.00e-11 63.2
MsG0680035322.01.T01 MTR_7g087370 38.144 97 59 1 10 105 14 110 1.18e-14 73.9
MsG0680035322.01.T01 MTR_7g087410 44.944 89 40 1 84 172 1 80 5.21e-14 72.0
MsG0680035322.01.T01 MTR_5g087930 32.174 115 74 1 50 160 51 165 2.15e-13 70.1
MsG0680035322.01.T01 MTR_7g087430 49.275 69 35 0 84 152 1 69 1.43e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035322.01.T01 AT5G52450 66.667 135 45 0 19 153 19 153 1.66e-56 189
MsG0680035322.01.T01 AT5G52450 58.407 113 35 2 161 272 300 401 1.26e-34 130
MsG0680035322.01.T01 AT1G73700 62.162 148 52 1 6 153 8 151 2.01e-55 186
MsG0680035322.01.T01 AT1G73700 46.903 113 48 2 161 272 298 399 8.64e-25 103
MsG0680035322.01.T01 AT2G34360 59.459 148 55 1 6 153 12 154 1.63e-52 177
MsG0680035322.01.T01 AT2G34360 51.456 103 38 2 171 272 263 354 6.86e-25 103
MsG0680035322.01.T01 AT2G34360 59.459 148 55 1 6 153 12 154 4.51e-52 177
MsG0680035322.01.T01 AT2G34360 55.752 113 38 2 161 272 295 396 7.95e-33 125
MsG0680035322.01.T01 AT1G15150 40.994 161 86 1 4 164 9 160 1.20e-34 130
MsG0680035322.01.T01 AT1G15150 34.234 111 61 2 163 272 307 406 7.92e-16 77.4
MsG0680035322.01.T01 AT1G71140 43.137 153 76 2 14 164 12 155 7.06e-34 129
MsG0680035322.01.T01 AT1G71140 40.870 115 56 2 159 272 298 401 5.67e-18 84.0
MsG0680035322.01.T01 AT3G23560 40.764 157 83 1 5 151 8 164 9.38e-33 124
MsG0680035322.01.T01 AT3G23560 40.764 157 83 1 5 151 8 164 1.85e-32 124
MsG0680035322.01.T01 AT3G23550 46.154 130 70 0 24 153 29 158 3.24e-32 124
MsG0680035322.01.T01 AT3G23550 30.196 255 129 11 36 272 183 406 2.92e-12 67.0
MsG0680035322.01.T01 AT1G15160 39.130 161 89 1 4 164 9 160 3.37e-32 124
MsG0680035322.01.T01 AT1G15160 36.937 111 58 2 163 272 307 406 1.65e-17 82.4
MsG0680035322.01.T01 AT1G66760 37.059 170 94 4 2 168 4 163 6.00e-32 122
MsG0680035322.01.T01 AT1G66760 45.349 86 46 1 166 250 307 392 4.68e-13 68.9
MsG0680035322.01.T01 AT1G66760 37.059 170 94 4 2 168 4 163 1.83e-31 122
MsG0680035322.01.T01 AT1G66760 42.593 108 50 2 166 272 307 403 9.81e-16 77.4
MsG0680035322.01.T01 AT1G66760 37.059 170 94 4 2 168 4 163 2.02e-31 122
MsG0680035322.01.T01 AT1G66760 42.593 108 50 2 166 272 307 403 1.07e-15 77.0
MsG0680035322.01.T01 AT1G15170 43.125 160 80 2 7 164 13 163 3.20e-30 118
MsG0680035322.01.T01 AT1G15170 38.739 111 56 2 163 272 310 409 4.15e-19 87.0
MsG0680035322.01.T01 AT1G15180 43.624 149 82 1 7 153 14 162 3.18e-29 115
MsG0680035322.01.T01 AT1G15180 37.838 111 57 2 163 272 311 410 4.66e-18 84.0
MsG0680035322.01.T01 AT2G04040 42.675 157 81 1 23 179 24 171 7.25e-29 115
MsG0680035322.01.T01 AT2G04040 39.823 113 56 2 161 272 301 402 7.86e-17 80.5
MsG0680035322.01.T01 AT2G04050 43.885 139 69 1 26 164 27 156 7.77e-29 114
MsG0680035322.01.T01 AT2G04050 41.176 119 58 2 161 278 301 408 5.39e-19 87.0
MsG0680035322.01.T01 AT1G58340 41.270 126 74 0 24 149 56 181 8.24e-28 112
MsG0680035322.01.T01 AT2G04080 41.007 139 73 1 26 164 27 156 1.83e-27 110
MsG0680035322.01.T01 AT2G04080 42.241 116 55 2 161 275 301 405 3.53e-20 90.1
MsG0680035322.01.T01 AT2G04080 41.007 139 73 1 26 164 27 156 2.06e-27 110
MsG0680035322.01.T01 AT2G04080 42.241 116 55 2 161 275 301 405 3.57e-20 90.1
MsG0680035322.01.T01 AT2G04100 39.161 143 87 0 8 150 12 154 1.12e-26 108
MsG0680035322.01.T01 AT2G04100 40.708 113 55 2 161 272 304 405 1.28e-19 88.6
MsG0680035322.01.T01 AT2G04100 39.161 143 87 0 8 150 12 154 1.28e-26 108
MsG0680035322.01.T01 AT2G04100 40.708 113 55 2 161 272 304 405 1.26e-19 88.6
MsG0680035322.01.T01 AT2G04090 41.085 129 76 0 22 150 26 154 4.28e-26 107
MsG0680035322.01.T01 AT2G04090 36.607 112 59 2 162 272 305 405 2.48e-16 79.0
MsG0680035322.01.T01 AT2G04070 44.000 125 70 0 26 150 27 151 1.63e-25 105
MsG0680035322.01.T01 AT2G04070 41.176 119 58 2 161 278 301 408 1.62e-19 88.2
MsG0680035322.01.T01 AT4G00350 43.077 130 72 2 22 149 82 211 2.93e-24 102
MsG0680035322.01.T01 AT4G00350 32.192 146 76 5 131 270 331 459 3.61e-12 66.6
MsG0680035322.01.T01 AT1G71870 30.496 141 96 2 10 149 8 147 1.21e-23 100
MsG0680035322.01.T01 AT5G49130 32.026 153 96 4 7 152 1 152 1.39e-23 100
MsG0680035322.01.T01 AT1G64820 37.681 138 75 2 33 168 36 164 1.55e-23 100
MsG0680035322.01.T01 AT1G64820 36.364 121 51 3 166 278 308 410 1.34e-12 68.2
MsG0680035322.01.T01 AT3G59030 35.912 181 98 3 3 165 14 194 5.74e-23 98.6
MsG0680035322.01.T01 AT3G59030 35.526 152 78 6 125 272 291 426 1.35e-12 68.2
MsG0680035322.01.T01 AT3G59030 35.429 175 96 2 8 165 20 194 5.77e-23 97.8
MsG0680035322.01.T01 AT3G59030 36.923 130 73 5 125 250 291 415 2.73e-11 63.9
MsG0680035322.01.T01 AT4G25640 35.000 160 96 3 1 152 1 160 6.68e-23 98.2
MsG0680035322.01.T01 AT1G23300 35.519 183 97 4 21 201 39 202 6.83e-23 98.2
MsG0680035322.01.T01 AT1G23300 38.053 113 52 4 162 270 318 416 8.68e-12 65.5
MsG0680035322.01.T01 AT4G25640 35.000 160 96 3 1 152 1 160 9.03e-23 97.8
MsG0680035322.01.T01 AT5G19700 34.722 144 91 1 9 149 16 159 9.97e-23 97.8
MsG0680035322.01.T01 AT1G47530 32.710 214 130 5 4 216 13 213 1.05e-22 97.8
MsG0680035322.01.T01 AT4G25640 35.000 160 96 3 1 152 1 160 1.09e-22 97.8
MsG0680035322.01.T01 AT2G38510 34.400 125 82 0 25 149 5 129 1.13e-22 97.4
MsG0680035322.01.T01 AT5G65380 35.802 162 92 2 3 164 17 166 1.44e-22 97.4
MsG0680035322.01.T01 AT1G61890 30.570 193 110 4 2 179 8 191 2.18e-22 96.7
MsG0680035322.01.T01 AT1G61890 35.398 113 61 2 161 272 321 422 1.23e-13 70.9
MsG0680035322.01.T01 AT4G21910 34.911 169 88 3 2 149 12 179 2.52e-22 96.7
MsG0680035322.01.T01 AT4G21910 36.522 115 53 4 161 270 330 429 2.88e-13 70.1
MsG0680035322.01.T01 AT4G21910 34.911 169 88 3 2 149 12 179 2.52e-22 96.7
MsG0680035322.01.T01 AT4G21910 36.522 115 53 4 161 270 330 429 2.88e-13 70.1
MsG0680035322.01.T01 AT1G61890 30.570 193 110 4 2 179 8 191 2.61e-22 96.7
MsG0680035322.01.T01 AT1G61890 35.398 113 61 2 161 272 321 422 2.33e-13 70.1
MsG0680035322.01.T01 AT1G61890 30.570 193 110 4 2 179 8 191 4.19e-22 95.9
MsG0680035322.01.T01 AT1G61890 35.398 113 61 2 161 272 321 422 2.08e-13 70.5
MsG0680035322.01.T01 AT1G66780 41.732 127 63 2 44 168 53 170 5.85e-22 95.5
MsG0680035322.01.T01 AT4G29140 31.293 147 94 1 10 149 33 179 9.68e-22 95.1
MsG0680035322.01.T01 AT4G21910 38.060 134 78 2 20 149 45 177 2.20e-21 94.0
MsG0680035322.01.T01 AT4G21910 36.522 115 53 4 161 270 328 427 2.24e-13 70.5
MsG0680035322.01.T01 AT4G21910 38.060 134 78 2 20 149 45 177 2.20e-21 94.0
MsG0680035322.01.T01 AT4G21910 36.522 115 53 4 161 270 328 427 2.24e-13 70.5
MsG0680035322.01.T01 AT5G52050 34.211 114 75 0 33 146 42 155 5.57e-21 92.8
MsG0680035322.01.T01 AT4G22790 36.585 123 78 0 21 143 25 147 5.59e-21 92.8
MsG0680035322.01.T01 AT5G44050 33.714 175 96 3 13 179 22 184 1.66e-20 91.3
MsG0680035322.01.T01 AT1G33110 38.462 143 78 4 8 142 12 152 2.20e-20 90.5
MsG0680035322.01.T01 AT1G33110 38.462 143 78 4 8 142 12 152 2.78e-20 90.5
MsG0680035322.01.T01 AT4G21903 43.269 104 58 1 40 143 67 169 3.17e-20 90.5
MsG0680035322.01.T01 AT4G21903 38.261 115 51 4 161 270 326 425 3.32e-14 72.8
MsG0680035322.01.T01 AT4G21903 43.269 104 58 1 40 143 67 169 4.08e-20 90.1
MsG0680035322.01.T01 AT4G21903 38.261 115 51 4 161 270 326 425 3.41e-14 72.8
MsG0680035322.01.T01 AT1G11670 31.818 154 96 2 26 179 50 194 4.72e-20 90.1
MsG0680035322.01.T01 AT1G11670 31.469 143 80 4 132 270 295 423 5.87e-12 66.2
MsG0680035322.01.T01 AT1G12950 31.915 188 115 4 30 216 70 245 1.14e-19 89.0
MsG0680035322.01.T01 AT1G33090 38.462 143 78 4 8 142 12 152 1.23e-19 89.0
MsG0680035322.01.T01 AT1G33080 36.879 141 83 2 8 142 12 152 1.24e-19 89.0
MsG0680035322.01.T01 AT1G33080 36.879 141 83 2 8 142 12 152 1.29e-19 88.6
MsG0680035322.01.T01 AT5G10420 37.419 155 84 2 14 164 22 167 1.58e-19 88.6
MsG0680035322.01.T01 AT1G15170 38.739 111 56 2 163 272 191 290 3.05e-19 86.7
MsG0680035322.01.T01 AT4G23030 37.857 140 83 2 11 146 14 153 5.24e-19 87.0
MsG0680035322.01.T01 AT3G26590 30.102 196 125 3 21 216 40 223 6.36e-19 86.7
MsG0680035322.01.T01 AT3G26590 33.813 139 71 4 138 272 298 419 1.33e-11 65.1
MsG0680035322.01.T01 AT3G21690 34.646 127 83 0 20 146 46 172 1.23e-18 85.9
MsG0680035322.01.T01 AT3G21690 36.283 113 60 2 161 272 326 427 1.68e-15 76.6
MsG0680035322.01.T01 AT5G38030 33.594 128 85 0 26 153 45 172 1.26e-18 85.9
MsG0680035322.01.T01 AT5G38030 35.252 139 69 4 138 272 298 419 5.37e-12 66.2
MsG0680035322.01.T01 AT1G33100 36.879 141 80 5 8 142 12 149 8.38e-18 83.6
MsG0680035322.01.T01 AT1G66760 42.593 108 50 2 166 272 179 275 7.54e-16 77.0
MsG0680035322.01.T01 AT1G15150 34.234 111 61 2 163 272 191 290 8.94e-16 77.0
MsG0680035322.01.T01 AT1G15180 37.363 91 56 1 161 250 189 279 1.90e-14 73.2
MsG0680035322.01.T01 AT5G17700 31.655 139 87 3 10 143 16 151 2.17e-14 73.2
MsG0680035322.01.T01 AT5G17700 31.655 139 87 3 10 143 16 151 2.42e-14 73.2
MsG0680035322.01.T01 AT5G17700 31.655 139 87 3 10 143 16 151 2.42e-14 73.2
MsG0680035322.01.T01 AT4G21903 38.596 114 50 4 162 270 218 316 3.11e-14 72.4
MsG0680035322.01.T01 AT4G21903 46.667 60 32 0 84 143 1 60 9.25e-12 65.1
MsG0680035322.01.T01 AT3G03620 31.056 161 93 4 11 165 19 167 2.74e-13 70.1
MsG0680035322.01.T01 AT3G03620 31.056 161 93 4 11 165 19 167 2.74e-13 70.1
MsG0680035322.01.T01 AT2G04066 44.286 70 28 1 206 275 42 100 9.04e-12 62.8
MsG0680035322.01.T01 AT1G47530 44.444 81 36 1 84 164 1 72 1.63e-11 64.3
MsG0680035322.01.T01 AT3G26590 33.813 139 71 4 138 272 196 317 1.64e-11 64.3

Find 62 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATACTAGTTCGTAATTTA+TGG 0.163853 6:-102190753 MsG0680035322.01.T01:CDS
CTATTCCCCTCGCGATTATT+TGG 0.190931 6:-102191881 MsG0680035322.01.T01:CDS
TGTTACTGGTTTCAGTTTAT+TGG 0.197279 6:-102193419 MsG0680035322.01.T01:intron
GGAATGCAAGCTGTTCTTTC+AGG 0.202710 6:-102190646 MsG0680035322.01.T01:intron
CTGTAGATATTTCATGATCT+TGG 0.274075 6:+102191826 None:intergenic
AAGACACAGTTATGGTTATC+AGG 0.292681 6:-102193559 MsG0680035322.01.T01:CDS
TATTCCCCTCGCGATTATTT+GGG 0.313645 6:-102191880 MsG0680035322.01.T01:CDS
GAGAATGAAGAGACATGTTT+TGG 0.315699 6:+102193647 None:intergenic
AGGATGTGGTTGGCAGAAAT+TGG 0.317645 6:-102190295 MsG0680035322.01.T01:CDS
GTCATCACAGGCTGCGCGTT+TGG 0.317785 6:-102190831 MsG0680035322.01.T01:CDS
CTTATGTTTGTTGGTCATCT+TGG 0.328499 6:-102193487 MsG0680035322.01.T01:CDS
TCAGTTACACTCTTAAATTA+TGG 0.341516 6:-102193526 MsG0680035322.01.T01:CDS
ATTATTTCACTTATGTTTGT+TGG 0.354686 6:-102193496 MsG0680035322.01.T01:CDS
TATACTAGTTCGTAATTTAT+GGG 0.361051 6:-102190752 MsG0680035322.01.T01:CDS
TGGCAGCTATGCAAAGTTAA+TGG 0.367835 6:-102191799 MsG0680035322.01.T01:intron
TTGTCCACATAATGTGTCTA+AGG 0.380227 6:+102191977 None:intergenic
TTTGTTTCTTCAACAATCAA+TGG 0.392959 6:+102193625 None:intergenic
ACAAATGATCTCCTTCACTA+TGG 0.397743 6:-102190333 MsG0680035322.01.T01:CDS
CTTGGTGAGTTATCTCTCTC+TGG 0.414750 6:-102193469 MsG0680035322.01.T01:CDS
GATCTCCTTCACTATGGTTC+AGG 0.421679 6:-102190327 MsG0680035322.01.T01:CDS
ATGATCCCCTTCGGACTTAG+TGG 0.428230 6:-102191041 MsG0680035322.01.T01:CDS
ATCTCTCTCTGGTGCTTCCA+TGG 0.446304 6:-102193458 MsG0680035322.01.T01:CDS
GCAAAGCAGTACCGCATGTC+AGG 0.449733 6:-102191945 MsG0680035322.01.T01:CDS
AAGTGGGATACGGCAAGAAT+TGG 0.472050 6:+102190676 None:intergenic
ACATTATGTGGACAATCATA+TGG 0.474719 6:-102191969 MsG0680035322.01.T01:CDS
ATTCGTGTTTCGAATGAACT+TGG 0.485317 6:-102190859 MsG0680035322.01.T01:CDS
GCCGTATCCCACTTACTAGA+TGG 0.486822 6:-102190667 MsG0680035322.01.T01:CDS
ATTGGAGCGTTTGTCAACCT+TGG 0.487798 6:-102190277 MsG0680035322.01.T01:CDS
AGAAGCAAAAGAAGTAGCCA+TGG 0.492944 6:+102193441 None:intergenic
GACTAAGATGCTCTCAATAA+CGG 0.495838 6:+102190786 None:intergenic
AGCTGTTGGATGATCCCCTT+CGG 0.496192 6:-102191050 MsG0680035322.01.T01:CDS
CATGAAATATCTACAGAAGC+TGG 0.501346 6:-102191819 MsG0680035322.01.T01:CDS
CTTGCATTCCATCTAGTAAG+TGG 0.503895 6:+102190659 None:intergenic
TTAAATACAACTGCAGCTGT+TGG 0.509683 6:-102191064 MsG0680035322.01.T01:CDS
TCGGACTTAGTGGAGCTGTA+AGG 0.514444 6:-102191031 MsG0680035322.01.T01:intron
TTGGCCAAGTAAAATGAGAA+TGG 0.519826 6:+102191845 None:intergenic
TCAGGCACTGCTAGAGGATG+TGG 0.519915 6:-102190309 MsG0680035322.01.T01:CDS
AAGAAGTGAAGACACAGTTA+TGG 0.538327 6:-102193567 MsG0680035322.01.T01:CDS
AAGAGTGTAACTGATATCAA+TGG 0.542636 6:+102193535 None:intergenic
AACTTGGTGCTGGTCATCAC+AGG 0.545399 6:-102190843 MsG0680035322.01.T01:CDS
TCCATCTAGTAAGTGGGATA+CGG 0.545689 6:+102190666 None:intergenic
TTTGATTTAATAGATAGGAA+TGG 0.551294 6:-102192006 MsG0680035322.01.T01:intron
GTTTCGAATGAACTTGGTGC+TGG 0.552325 6:-102190853 MsG0680035322.01.T01:CDS
CAACTAAATAATATGATCCA+AGG 0.560535 6:+102190260 None:intergenic
ATACTAGTTCGTAATTTATG+GGG 0.564636 6:-102190751 MsG0680035322.01.T01:CDS
AGTGCCTTAGACACATTATG+TGG 0.575750 6:-102191981 MsG0680035322.01.T01:CDS
TACAGCTCCACTAAGTCCGA+AGG 0.592565 6:+102191034 None:intergenic
TGAGAGCATCTTAGTCGGAA+CGG 0.605010 6:-102190779 MsG0680035322.01.T01:CDS
TATGGTTCAGGCACTGCTAG+AGG 0.605754 6:-102190315 MsG0680035322.01.T01:CDS
ACAGCTCCACTAAGTCCGAA+GGG 0.616463 6:+102191035 None:intergenic
TTGCATTCCATCTAGTAAGT+GGG 0.618025 6:+102190660 None:intergenic
GTTTGCCCAAATAATCGCGA+GGG 0.618210 6:+102191875 None:intergenic
AGACACAGTTATGGTTATCA+GGG 0.618539 6:-102193558 MsG0680035322.01.T01:CDS
GTTATTGAGAGCATCTTAGT+CGG 0.638872 6:-102190784 MsG0680035322.01.T01:CDS
CAGTGCCTGAACCATAGTGA+AGG 0.642213 6:+102190322 None:intergenic
TGTTTGCCCAAATAATCGCG+AGG 0.649848 6:+102191874 None:intergenic
TGAAGAAACAAAACAAAACA+AGG 0.651044 6:-102193614 MsG0680035322.01.T01:CDS
GCACTGCTAGAGGATGTGGT+TGG 0.664505 6:-102190305 MsG0680035322.01.T01:CDS
GACGATCATGAGAATGAACA+TGG 0.672131 6:+102191905 None:intergenic
CAGCTCCACTAAGTCCGAAG+GGG 0.684598 6:+102191036 None:intergenic
TTTGCCCAAATAATCGCGAG+GGG 0.704818 6:+102191876 None:intergenic
GCATGTGTATGCCTGACATG+CGG 0.723702 6:+102191934 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTCAAACTTAAATTTA+TGG - Chr6:102191792-102191811 MsG0680035322.01.T01:intron 10.0%
!! TAAAATTCTATTATAATATG+TGG + Chr6:102192537-102192556 None:intergenic 10.0%
!!! ATAACTAATGTATTTTTTTT+TGG - Chr6:102190720-102190739 MsG0680035322.01.T01:CDS 10.0%
!! AAAATAAAATCAAAAGTTGT+TGG + Chr6:102193341-102193360 None:intergenic 15.0%
!! ATAATGTAACAATGTTAATT+TGG - Chr6:102191066-102191085 MsG0680035322.01.T01:CDS 15.0%
!!! AAATTTTTCAAGGAAAAAAA+TGG + Chr6:102190578-102190597 None:intergenic 15.0%
!!! CTTTTTATATATGTAAATTC+CGG + Chr6:102191279-102191298 None:intergenic 15.0%
!!! TTATTTTGTTCATAAGATTT+GGG - Chr6:102193354-102193373 MsG0680035322.01.T01:intron 15.0%
!!! TTGTTTTTGATTTAATAGAT+AGG - Chr6:102191941-102191960 MsG0680035322.01.T01:CDS 15.0%
!!! TTTATTTTGTTCATAAGATT+TGG - Chr6:102193353-102193372 MsG0680035322.01.T01:intron 15.0%
!! AGAAACATTCATTTCATTAA+CGG + Chr6:102191541-102191560 None:intergenic 20.0%
!! ATTATAAATGAGAACTTCTA+CGG - Chr6:102190627-102190646 MsG0680035322.01.T01:intron 20.0%
!! ATTATTTCACTTATGTTTGT+TGG - Chr6:102190456-102190475 MsG0680035322.01.T01:intron 20.0%
!! GTATAACTAATGTATTAATG+TGG - Chr6:102190749-102190768 MsG0680035322.01.T01:CDS 20.0%
!! TACTACTAAGATTACAAAAT+TGG + Chr6:102191003-102191022 None:intergenic 20.0%
!! TAGGATTAAGTTAAATAGTT+AGG + Chr6:102192964-102192983 None:intergenic 20.0%
!! TATACTAGTTCGTAATTTAT+GGG - Chr6:102193200-102193219 MsG0680035322.01.T01:intron 20.0%
!! TCTAATATATTGGTACAAAA+AGG - Chr6:102193406-102193425 MsG0680035322.01.T01:intron 20.0%
!! TTATACTAGTTCGTAATTTA+TGG - Chr6:102193199-102193218 MsG0680035322.01.T01:intron 20.0%
!! TTATGGTATAAATTCTTAAC+CGG - Chr6:102191257-102191276 MsG0680035322.01.T01:intron 20.0%
!!! AAAAAAAAGTTTTACGCTTA+TGG - Chr6:102191240-102191259 MsG0680035322.01.T01:intron 20.0%
!!! ATACAATATTTTGAGTTTGT+AGG + Chr6:102192224-102192243 None:intergenic 20.0%
!!! TAAAGTTTGAGTTTCTTTTT+TGG - Chr6:102190907-102190926 MsG0680035322.01.T01:intron 20.0%
!!! TCTGATTATGAAATTTTTCA+AGG + Chr6:102190588-102190607 None:intergenic 20.0%
!!! TTTGATTTAATAGATAGGAA+TGG - Chr6:102191946-102191965 MsG0680035322.01.T01:CDS 20.0%
! AAAAATCATGGATTCAATTG+TGG - Chr6:102191040-102191059 MsG0680035322.01.T01:CDS 25.0%
! AAATCTCAAATATAGAAACG+AGG - Chr6:102191157-102191176 MsG0680035322.01.T01:intron 25.0%
! AATGTGGTCATTTGAATTAA+TGG - Chr6:102192659-102192678 MsG0680035322.01.T01:intron 25.0%
! AATTAATAGTCTACTAATGC+TGG + Chr6:102190696-102190715 None:intergenic 25.0%
! ATACTAGTTCGTAATTTATG+GGG - Chr6:102193201-102193220 MsG0680035322.01.T01:intron 25.0%
! ATTCATTTCATTAACGGAAA+TGG + Chr6:102191535-102191554 None:intergenic 25.0%
! CAATAATTCATAAAACCCTA+GGG + Chr6:102191433-102191452 None:intergenic 25.0%
! GTACAAAAAGGTAACTAATT+TGG - Chr6:102193418-102193437 MsG0680035322.01.T01:intron 25.0%
! GTTCATGTATGCTTAAAAAT+CGG + Chr6:102191612-102191631 None:intergenic 25.0%
! TACGTGAACTTCTAATATAT+TGG - Chr6:102193396-102193415 MsG0680035322.01.T01:intron 25.0%
! TCACAATGAATAAGAACATA+TGG + Chr6:102191666-102191685 None:intergenic 25.0%
! TCAGTTACACTCTTAAATTA+TGG - Chr6:102190426-102190445 MsG0680035322.01.T01:intron 25.0%
! TCTTATTCATTGTGATGTTT+GGG - Chr6:102191671-102191690 MsG0680035322.01.T01:intron 25.0%
! TGAAGAAACAAAACAAAACA+AGG - Chr6:102190338-102190357 MsG0680035322.01.T01:CDS 25.0%
! TTCTTATTCATTGTGATGTT+TGG - Chr6:102191670-102191689 MsG0680035322.01.T01:intron 25.0%
!! AGTCTAAACTTGTTCATAAT+TGG - Chr6:102191763-102191782 MsG0680035322.01.T01:intron 25.0%
!! CTTTAGTCTCTAAAAAATCA+TGG - Chr6:102191028-102191047 MsG0680035322.01.T01:intron 25.0%
!! TTTGTTTCTTCAACAATCAA+TGG + Chr6:102190330-102190349 None:intergenic 25.0%
!! TTTTCCTATACTCTAATAGT+AGG - Chr6:102191853-102191872 MsG0680035322.01.T01:CDS 25.0%
!!! AGAAAAAAGCTTTGAGAATT+AGG + Chr6:102192983-102193002 None:intergenic 25.0%
!!! CTAGGGTTTTATGAATTATT+GGG - Chr6:102191432-102191451 MsG0680035322.01.T01:intron 25.0%
!!! GTTCTAGTTTAACTTAAACA+TGG + Chr6:102191190-102191209 None:intergenic 25.0%
!!! TATTTTTGGACAAATGACAA+AGG + Chr6:102191908-102191927 None:intergenic 25.0%
AACACCTACTATTAGAGTAT+AGG + Chr6:102191860-102191879 None:intergenic 30.0%
ACATTATGTGGACAATCATA+TGG - Chr6:102191983-102192002 MsG0680035322.01.T01:CDS 30.0%
AGCAAATTCAATATCGTACT+GGG - Chr6:102192342-102192361 MsG0680035322.01.T01:intron 30.0%
ATTGGAGGAAACATTAATAC+AGG - Chr6:102190973-102190992 MsG0680035322.01.T01:intron 30.0%
CAAATATGCATTCAACACAA+GGG - Chr6:102191496-102191515 MsG0680035322.01.T01:intron 30.0%
CCAATAATTCATAAAACCCT+AGG + Chr6:102191434-102191453 None:intergenic 30.0%
CTGTAGATATTTCATGATCT+TGG + Chr6:102192129-102192148 None:intergenic 30.0%
CTTATTCATTGTGATGTTTG+GGG - Chr6:102191672-102191691 MsG0680035322.01.T01:intron 30.0%
CTTGTGTTGAATGCATATTT+GGG + Chr6:102191497-102191516 None:intergenic 30.0%
TAATGGTATACAAGTCGATT+AGG - Chr6:102192301-102192320 MsG0680035322.01.T01:intron 30.0%
TAGCAAATTCAATATCGTAC+TGG - Chr6:102192341-102192360 MsG0680035322.01.T01:intron 30.0%
TATACCATTATCCAACATAG+AGG + Chr6:102192291-102192310 None:intergenic 30.0%
TTAGAGTTGAGAGAAATAGA+GGG + Chr6:102191712-102191731 None:intergenic 30.0%
TTCATGTAAGAAAACATGGA+TGG - Chr6:102192405-102192424 MsG0680035322.01.T01:intron 30.0%
! AAGAGTGTAACTGATATCAA+TGG + Chr6:102190420-102190439 None:intergenic 30.0%
! AGATCCATTCTCATTTTACT+TGG - Chr6:102192103-102192122 MsG0680035322.01.T01:intron 30.0%
! ATCCATGTTTTCTTACATGA+AGG + Chr6:102192406-102192425 None:intergenic 30.0%
! TAATGTGGTTTGTGTGAATT+AGG - Chr6:102190764-102190783 MsG0680035322.01.T01:CDS 30.0%
! TTTAGAGTTGAGAGAAATAG+AGG + Chr6:102191713-102191732 None:intergenic 30.0%
!! CCTAGGGTTTTATGAATTAT+TGG - Chr6:102191431-102191450 MsG0680035322.01.T01:intron 30.0%
!! GTACGATATTGAATTTGCTA+TGG + Chr6:102192341-102192360 None:intergenic 30.0%
!! TGTTACTGGTTTCAGTTTAT+TGG - Chr6:102190533-102190552 MsG0680035322.01.T01:intron 30.0%
!! TTAACCTTTTGTTTGTGACT+TGG - Chr6:102192855-102192874 MsG0680035322.01.T01:intron 30.0%
AAACATCTGTGCTTTCTATC+TGG - Chr6:102192718-102192737 MsG0680035322.01.T01:intron 35.0%
AAGAAGTGAAGACACAGTTA+TGG - Chr6:102190385-102190404 MsG0680035322.01.T01:intron 35.0%
AAGACACAGTTATGGTTATC+AGG - Chr6:102190393-102190412 MsG0680035322.01.T01:intron 35.0%
AAGTTTAGACTTCGAGGTAA+TGG + Chr6:102191754-102191773 None:intergenic 35.0%
ACAAATGATCTCCTTCACTA+TGG - Chr6:102193619-102193638 MsG0680035322.01.T01:CDS 35.0%
AGAACCAAGTCACAAACAAA+AGG + Chr6:102192862-102192881 None:intergenic 35.0%
AGACACAGTTATGGTTATCA+GGG - Chr6:102190394-102190413 MsG0680035322.01.T01:intron 35.0%
AGAGAAATAGAGGGAAACAA+AGG + Chr6:102191703-102191722 None:intergenic 35.0%
AGTTTAGACTTCGAGGTAAT+GGG + Chr6:102191753-102191772 None:intergenic 35.0%
ATGAACAAGTTTAGACTTCG+AGG + Chr6:102191760-102191779 None:intergenic 35.0%
ATGAAGTAATGTTGTAACCG+AGG + Chr6:102192265-102192284 None:intergenic 35.0%
ATTCGTGTTTCGAATGAACT+TGG - Chr6:102193093-102193112 MsG0680035322.01.T01:intron 35.0%
CATGAAATATCTACAGAAGC+TGG - Chr6:102192133-102192152 MsG0680035322.01.T01:intron 35.0%
CATTTCATTAACGGAAATGG+AGG + Chr6:102191532-102191551 None:intergenic 35.0%
CCAAATATGCATTCAACACA+AGG - Chr6:102191495-102191514 MsG0680035322.01.T01:intron 35.0%
CCTTGTGTTGAATGCATATT+TGG + Chr6:102191498-102191517 None:intergenic 35.0%
CTACGGTACACACATAAATA+TGG - Chr6:102190644-102190663 MsG0680035322.01.T01:intron 35.0%
CTCCTTCATGTAAGAAAACA+TGG - Chr6:102192401-102192420 MsG0680035322.01.T01:intron 35.0%
GAATTAATGGTTCTCCTTTC+TGG - Chr6:102192672-102192691 MsG0680035322.01.T01:intron 35.0%
GACTAAGATGCTCTCAATAA+CGG + Chr6:102193169-102193188 None:intergenic 35.0%
GATGTTTCCAACTTTGGATT+TGG + Chr6:102192705-102192724 None:intergenic 35.0%
TAAACAACAGTCATCGAAGT+TGG - Chr6:102193528-102193547 MsG0680035322.01.T01:CDS 35.0%
TACTTCATCTTCCTCTATGT+TGG - Chr6:102192277-102192296 MsG0680035322.01.T01:intron 35.0%
TCTTCCTCTATGTTGGATAA+TGG - Chr6:102192284-102192303 MsG0680035322.01.T01:intron 35.0%
TCTTCTTCCAAATCCAAAGT+TGG - Chr6:102192695-102192714 MsG0680035322.01.T01:intron 35.0%
TTAAATACAACTGCAGCTGT+TGG - Chr6:102192888-102192907 MsG0680035322.01.T01:intron 35.0%
TTAGAAGTTCACGTATGTCT+CGG + Chr6:102193391-102193410 None:intergenic 35.0%
TTGCATTCCATCTAGTAAGT+GGG + Chr6:102193295-102193314 None:intergenic 35.0%
TTGGCCAAGTAAAATGAGAA+TGG + Chr6:102192110-102192129 None:intergenic 35.0%
TTGTCCACATAATGTGTCTA+AGG + Chr6:102191978-102191997 None:intergenic 35.0%
! AAACATGGATGGTTTTTCCA+AGG - Chr6:102192416-102192435 MsG0680035322.01.T01:intron 35.0%
! ACTTCTTTTGCTTCTGTTAC+TGG - Chr6:102190519-102190538 MsG0680035322.01.T01:intron 35.0%
! CTTATGTTTGTTGGTCATCT+TGG - Chr6:102190465-102190484 MsG0680035322.01.T01:intron 35.0%
! GAGAATGAAGAGACATGTTT+TGG + Chr6:102190308-102190327 None:intergenic 35.0%
! GGTTGTCAGAATCTTTTTGA+AGG - Chr6:102190928-102190947 MsG0680035322.01.T01:intron 35.0%
!! AGGTAATGGGAAAAGAGAAA+AGG + Chr6:102191740-102191759 None:intergenic 35.0%
!! GGACGAAAATTTTTGTTTGC+TGG - Chr6:102191087-102191106 MsG0680035322.01.T01:intron 35.0%
!! GTTATTGAGAGCATCTTAGT+CGG - Chr6:102193168-102193187 MsG0680035322.01.T01:intron 35.0%
AGAAGCAAAAGAAGTAGCCA+TGG + Chr6:102190514-102190533 None:intergenic 40.0%
AGCACAGATGTTTCCAACTT+TGG + Chr6:102192711-102192730 None:intergenic 40.0%
AGTGCCTTAGACACATTATG+TGG - Chr6:102191971-102191990 MsG0680035322.01.T01:CDS 40.0%
ATGGCAAGCTTCAGGAAAAT+TGG + Chr6:102192465-102192484 None:intergenic 40.0%
ATTCATGCAATCAGACATGG+TGG - Chr6:102190819-102190838 MsG0680035322.01.T01:CDS 40.0%
CACAATCCTAGAATTGTACC+TGG - Chr6:102191350-102191369 MsG0680035322.01.T01:intron 40.0%
CATCGTGACGAGGAAAAAAA+TGG + Chr6:102192628-102192647 None:intergenic 40.0%
CCTAGAATTGTACCTGGTTA+AGG - Chr6:102191356-102191375 MsG0680035322.01.T01:intron 40.0%
CCTTAACCAGGTACAATTCT+AGG + Chr6:102191359-102191378 None:intergenic 40.0%
CTTGCATTCCATCTAGTAAG+TGG + Chr6:102193296-102193315 None:intergenic 40.0%
GAATTGTACCTGGTTAAGGA+TGG - Chr6:102191360-102191379 MsG0680035322.01.T01:intron 40.0%
GACGATCATGAGAATGAACA+TGG + Chr6:102192050-102192069 None:intergenic 40.0%
GAGCTGTAAGGTTTGAATAC+AGG - Chr6:102192933-102192952 MsG0680035322.01.T01:intron 40.0%
GATTTGGAAGAAGACCAGAA+AGG + Chr6:102192689-102192708 None:intergenic 40.0%
GTAGAAGACCGTAAGCAAAA+AGG + Chr6:102192186-102192205 None:intergenic 40.0%
TATTCCCCTCGCGATTATTT+GGG - Chr6:102192072-102192091 MsG0680035322.01.T01:intron 40.0%
TCATTAACGGAAATGGAGGA+TGG + Chr6:102191528-102191547 None:intergenic 40.0%
TCATTGTCGTGTCCAAATCA+CGG - Chr6:102191459-102191478 MsG0680035322.01.T01:intron 40.0%
TCCATCTAGTAAGTGGGATA+CGG + Chr6:102193289-102193308 None:intergenic 40.0%
TGACAAAGGTTGAATCTCAG+TGG + Chr6:102191894-102191913 None:intergenic 40.0%
TGCATTCATGCAATCAGACA+TGG - Chr6:102190816-102190835 MsG0680035322.01.T01:CDS 40.0%
TGGCAAGCTTCAGGAAAATT+GGG + Chr6:102192464-102192483 None:intergenic 40.0%
TGGCAGCTATGCAAAGTTAA+TGG - Chr6:102192153-102192172 MsG0680035322.01.T01:intron 40.0%
TTTGACATAGAGTGCGAGTA+TGG + Chr6:102192377-102192396 None:intergenic 40.0%
! GGTGTTATGAGTACTAGAGT+AGG + Chr6:102192516-102192535 None:intergenic 40.0%
! GTTCCATGCCTTTTTGCTTA+CGG - Chr6:102192175-102192194 MsG0680035322.01.T01:intron 40.0%
! TCCAATGATGTTTAGCTCCT+CGG - Chr6:102192245-102192264 MsG0680035322.01.T01:intron 40.0%
! TGATTTGGACACGACAATGA+AGG + Chr6:102191459-102191478 None:intergenic 40.0%
!! GATGGATGTCTGGGATTTTA+GGG - Chr6:102191378-102191397 MsG0680035322.01.T01:intron 40.0%
AAGTGGGATACGGCAAGAAT+TGG + Chr6:102193279-102193298 None:intergenic 45.0%
ACAAGTCGATTAGGTAGCAG+AGG - Chr6:102192310-102192329 MsG0680035322.01.T01:intron 45.0%
ACCGAGGAGCTAAACATCAT+TGG + Chr6:102192249-102192268 None:intergenic 45.0%
AGACCGTAAGCAAAAAGGCA+TGG + Chr6:102192181-102192200 None:intergenic 45.0%
AGGATGTGGTTGGCAGAAAT+TGG - Chr6:102193657-102193676 MsG0680035322.01.T01:exon 45.0%
ATTCATAAAACCCTAGGGCC+AGG + Chr6:102191428-102191447 None:intergenic 45.0%
CATCTGTGCTTTCTATCTGG+TGG - Chr6:102192721-102192740 MsG0680035322.01.T01:intron 45.0%
CTATTCCCCTCGCGATTATT+TGG - Chr6:102192071-102192090 MsG0680035322.01.T01:intron 45.0%
CTGGTTAAGGATGGATGTCT+GGG - Chr6:102191369-102191388 MsG0680035322.01.T01:intron 45.0%
CTTGGTGAGTTATCTCTCTC+TGG - Chr6:102190483-102190502 MsG0680035322.01.T01:intron 45.0%
GACCATTACAGCTGAAGGAA+TGG + Chr6:102192484-102192503 None:intergenic 45.0%
GATCTCCTTCACTATGGTTC+AGG - Chr6:102193625-102193644 MsG0680035322.01.T01:CDS 45.0%
GGAATGCAAGCTGTTCTTTC+AGG - Chr6:102193306-102193325 MsG0680035322.01.T01:intron 45.0%
GGTTGAATCTCAGTGGATCA+TGG + Chr6:102191887-102191906 None:intergenic 45.0%
GTTTGCCCAAATAATCGCGA+GGG + Chr6:102192080-102192099 None:intergenic 45.0%
TACCAGACCATTACAGCTGA+AGG + Chr6:102192489-102192508 None:intergenic 45.0%
TCATTGTGATGTTTGGGGAC+TGG - Chr6:102191677-102191696 MsG0680035322.01.T01:intron 45.0%
TGCATTCAACACAAGGGTCT+TGG - Chr6:102191502-102191521 MsG0680035322.01.T01:intron 45.0%
TGCCATTCCTTCAGCTGTAA+TGG - Chr6:102192479-102192498 MsG0680035322.01.T01:intron 45.0%
TGTGTGGTCGAAAATTGTCC+TGG - Chr6:102191407-102191426 MsG0680035322.01.T01:intron 45.0%
TGTTTGCCCAAATAATCGCG+AGG + Chr6:102192081-102192100 None:intergenic 45.0%
TTCCTCCAATCGTGTAGTCA+GGG + Chr6:102190963-102190982 None:intergenic 45.0%
TTCCTTCAGCTGTAATGGTC+TGG - Chr6:102192484-102192503 MsG0680035322.01.T01:intron 45.0%
TTTCCTCCAATCGTGTAGTC+AGG + Chr6:102190964-102190983 None:intergenic 45.0%
TTTGCCCAAATAATCGCGAG+GGG + Chr6:102192079-102192098 None:intergenic 45.0%
! ATTGGAGCGTTTGTCAACCT+TGG - Chr6:102193675-102193694 MsG0680035322.01.T01:five_prime_UTR 45.0%
!! GGATGGATGTCTGGGATTTT+AGG - Chr6:102191377-102191396 MsG0680035322.01.T01:intron 45.0%
!! GTTTCGAATGAACTTGGTGC+TGG - Chr6:102193099-102193118 MsG0680035322.01.T01:intron 45.0%
!! TGAGAGCATCTTAGTCGGAA+CGG - Chr6:102193173-102193192 MsG0680035322.01.T01:intron 45.0%
!!! GATTTTAGGGTGAGTGTGTG+TGG - Chr6:102191391-102191410 MsG0680035322.01.T01:intron 45.0%
!!! AAACTTTTTTTTTTTTTTTT+TGG + Chr6:102191232-102191251 None:intergenic 5.0%
!!! AATAAAATCAAATTTATTTT+TGG + Chr6:102191922-102191941 None:intergenic 5.0%
ACAGCTCCACTAAGTCCGAA+GGG + Chr6:102192920-102192939 None:intergenic 50.0%
ACATGTACCCCACCGTGATT+TGG + Chr6:102191474-102191493 None:intergenic 50.0%
AGCTGTTGGATGATCCCCTT+CGG - Chr6:102192902-102192921 MsG0680035322.01.T01:intron 50.0%
ATCTCTCTCTGGTGCTTCCA+TGG - Chr6:102190494-102190513 MsG0680035322.01.T01:intron 50.0%
ATGATCCCCTTCGGACTTAG+TGG - Chr6:102192911-102192930 MsG0680035322.01.T01:intron 50.0%
CAATCGTGTAGTCAGGGTAC+TGG + Chr6:102190957-102190976 None:intergenic 50.0%
CAGTACCCTGACTACACGAT+TGG - Chr6:102190955-102190974 MsG0680035322.01.T01:intron 50.0%
CAGTGCCTGAACCATAGTGA+AGG + Chr6:102193633-102193652 None:intergenic 50.0%
CCAGACATCCATCCTTAACC+AGG + Chr6:102191371-102191390 None:intergenic 50.0%
CCTGGTTAAGGATGGATGTC+TGG - Chr6:102191368-102191387 MsG0680035322.01.T01:intron 50.0%
CGAAAATTGTCCTGGCCCTA+GGG - Chr6:102191415-102191434 MsG0680035322.01.T01:intron 50.0%
CGATGAGCAGCTTGGAAATG+TGG - Chr6:102192643-102192662 MsG0680035322.01.T01:intron 50.0%
CTGAAGGAATGGCAAGCTTC+AGG + Chr6:102192473-102192492 None:intergenic 50.0%
GCATGTGTATGCCTGACATG+CGG + Chr6:102192021-102192040 None:intergenic 50.0%
GCCGTATCCCACTTACTAGA+TGG - Chr6:102193285-102193304 MsG0680035322.01.T01:intron 50.0%
TACAGCTCCACTAAGTCCGA+AGG + Chr6:102192921-102192940 None:intergenic 50.0%
TACCCTGACTACACGATTGG+AGG - Chr6:102190958-102190977 MsG0680035322.01.T01:intron 50.0%
TCGAAAATTGTCCTGGCCCT+AGG - Chr6:102191414-102191433 MsG0680035322.01.T01:intron 50.0%
TCGGACTTAGTGGAGCTGTA+AGG - Chr6:102192921-102192940 MsG0680035322.01.T01:intron 50.0%
TGTCGTGTCCAAATCACGGT+GGG - Chr6:102191463-102191482 MsG0680035322.01.T01:intron 50.0%
TTGTCGTGTCCAAATCACGG+TGG - Chr6:102191462-102191481 MsG0680035322.01.T01:intron 50.0%
! TATGGTTCAGGCACTGCTAG+AGG - Chr6:102193637-102193656 MsG0680035322.01.T01:CDS 50.0%
!! AACTTGGTGCTGGTCATCAC+AGG - Chr6:102193109-102193128 MsG0680035322.01.T01:intron 50.0%
CAGCTCCACTAAGTCCGAAG+GGG + Chr6:102192919-102192938 None:intergenic 55.0%
GCAAAGCAGTACCGCATGTC+AGG - Chr6:102192007-102192026 MsG0680035322.01.T01:intron 55.0%
GCACTGCTAGAGGATGTGGT+TGG - Chr6:102193647-102193666 MsG0680035322.01.T01:exon 55.0%
GTCGTGTCCAAATCACGGTG+GGG - Chr6:102191464-102191483 MsG0680035322.01.T01:intron 55.0%
GTTCAGCGCAAGTGCTTCCT+TGG + Chr6:102192436-102192455 None:intergenic 55.0%
! TCAGGCACTGCTAGAGGATG+TGG - Chr6:102193643-102193662 MsG0680035322.01.T01:CDS 55.0%
!! TCGTGTAGTCAGGGTACTGG+AGG + Chr6:102190954-102190973 None:intergenic 55.0%
CCAAGCTGCTCATCGTGACG+AGG + Chr6:102192638-102192657 None:intergenic 60.0%
CCTCGTCACGATGAGCAGCT+TGG - Chr6:102192635-102192654 MsG0680035322.01.T01:intron 60.0%
GTCATCACAGGCTGCGCGTT+TGG - Chr6:102193121-102193140 MsG0680035322.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 102190263 102193711 102190263 ID=MsG0680035322.01;Name=MsG0680035322.01
Chr6 mRNA 102190263 102193711 102190263 ID=MsG0680035322.01.T01;Parent=MsG0680035322.01;Name=MsG0680035322.01.T01;_AED=0.47;_eAED=0.47;_QI=49|0.5|0.6|1|1|1|5|0|282
Chr6 exon 102190263 102190360 102190263 ID=MsG0680035322.01.T01:exon:10853;Parent=MsG0680035322.01.T01
Chr6 exon 102190647 102190882 102190647 ID=MsG0680035322.01.T01:exon:10852;Parent=MsG0680035322.01.T01
Chr6 exon 102191032 102191087 102191032 ID=MsG0680035322.01.T01:exon:10851;Parent=MsG0680035322.01.T01
Chr6 exon 102191800 102192015 102191800 ID=MsG0680035322.01.T01:exon:10850;Parent=MsG0680035322.01.T01
Chr6 exon 102193420 102193711 102193420 ID=MsG0680035322.01.T01:exon:10849;Parent=MsG0680035322.01.T01
Chr6 five_prime_UTR 102193663 102193711 102193663 ID=MsG0680035322.01.T01:five_prime_utr;Parent=MsG0680035322.01.T01
Chr6 CDS 102193420 102193662 102193420 ID=MsG0680035322.01.T01:cds;Parent=MsG0680035322.01.T01
Chr6 CDS 102191800 102192015 102191800 ID=MsG0680035322.01.T01:cds;Parent=MsG0680035322.01.T01
Chr6 CDS 102191032 102191087 102191032 ID=MsG0680035322.01.T01:cds;Parent=MsG0680035322.01.T01
Chr6 CDS 102190647 102190882 102190647 ID=MsG0680035322.01.T01:cds;Parent=MsG0680035322.01.T01
Chr6 CDS 102190263 102190360 102190263 ID=MsG0680035322.01.T01:cds;Parent=MsG0680035322.01.T01
Gene Sequence

>MsG0680035322.01.T01

ATGTCTCTTCATTCTCCATTGATTGTTGAAGAAACAAAACAAAACAAGGAAGAAGAAAGAAGAAGATTAGTTGAAGAAGTGAAGACACAGTTATGGTTATCAGGGCCATTGATATCAGTTACACTCTTAAATTATGGTATCAATATTATTTCACTTATGTTTGTTGGTCATCTTGGTGAGTTATCTCTCTCTGGTGCTTCCATGGCTACTTCTTTTGCTTCTGTTACTGGTTTCAGTTTATTGATAGGAATGGCAAGTGCCTTAGACACATTATGTGGACAATCATATGGCGCAAAGCAGTACCGCATGTCAGGCATACACATGCAAAGAGCCATGTTCATTCTCATGATCGTCGCTATTCCCCTCGCGATTATTTGGGCAAACACAAGATCCATTCTCATTTTACTTGGCCAAGATCATGAAATATCTACAGAAGCTGGCAGCTATGCAAAGTTAATGTTTAAATACAACTGCAGCTGTTGGATGATCCCCTTCGGACTTAGTGGAGCTGTAAGCATTCGTGTTTCGAATGAACTTGGTGCTGGTCATCACAGGCTGCGCGTTTGGCAGTTTGTCGTTGTAGTGATTGCCGTTATTGAGAGCATCTTAGTCGGAACGGTGATTATACTAGTTCGTAATTTATGGGGATATGCTTATAGCAACGAAGAAGAAGTAGTCAAATATGTTGCAACTATGATGCCAATTCTTGCCGTATCCCACTTACTAGATGGAATGCAAGCTGTTCTTTCAGTCGTTACAAATGATCTCCTTCACTATGGTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAATTGGAGCGTTTGTCAACCTTGGATCATATTATTTAG

Protein sequence

>MsG0680035322.01.T01

MSLHSPLIVEETKQNKEEERRRLVEEVKTQLWLSGPLISVTLLNYGINIISLMFVGHLGELSLSGASMATSFASVTGFSLLIGMASALDTLCGQSYGAKQYRMSGIHMQRAMFILMIVAIPLAIIWANTRSILILLGQDHEISTEAGSYAKLMFKYNCSCWMIPFGLSGAVSIRVSNELGAGHHRLRVWQFVVVVIAVIESILVGTVIILVRNLWGYAYSNEEEVVKYVATMMPILAVSHLLDGMQAVLSVVTNDLLHYGSGTARGCGWQKLERLSTLDHII*