AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333420 MtrunA17_Chr4g0057141 70.287 488 47 6 1 393 1 485 0.0 635
Msa1333420 MtrunA17_Chr1g0185891 72.330 412 48 5 45 393 16 424 0.0 564
Msa1333420 MtrunA17_Chr8g0361561 36.054 147 87 3 250 393 107 249 1.72e-20 92.8
Msa1333420 MtrunA17_Chr4g0067151 34.752 141 85 4 254 392 112 247 5.71e-17 81.6
Msa1333420 MtrunA17_Chr4g0067151 30.526 190 111 7 238 417 6 184 8.27e-16 78.2
Msa1333420 MtrunA17_Chr6g0448921 32.836 134 82 5 253 384 92 219 8.78e-16 79.7
Msa1333420 MtrunA17_Chr6g0448921 32.061 131 78 6 252 378 133 256 3.97e-12 68.2
Msa1333420 MtrunA17_Chr2g0281451 32.836 134 82 5 253 384 91 218 3.23e-15 78.2
Msa1333420 MtrunA17_Chr8g0383711 34.848 132 82 4 250 381 6 133 1.68e-14 73.9
Msa1333420 MtrunA17_Chr7g0253861 32.231 121 80 2 259 379 52 170 5.29e-13 69.7
Msa1333420 MtrunA17_Chr1g0185501 29.545 132 87 4 254 384 61 187 8.31e-13 68.9
Msa1333420 MtrunA17_Chr1g0185501 29.167 144 96 4 249 391 14 152 1.16e-12 68.6
Msa1333420 MtrunA17_Chr1g0185501 28.986 138 95 3 255 392 104 238 9.02e-12 65.9
Msa1333420 MtrunA17_Chr4g0058091 34.043 94 60 2 253 346 305 396 6.46e-12 67.4
Msa1333420 MtrunA17_Chr4g0058091 29.412 136 93 3 250 385 218 350 7.71e-12 67.0
Msa1333420 MtrunA17_Chr3g0099061 28.302 159 99 6 186 344 244 387 7.84e-11 63.9
Msa1333420 MtrunA17_Chr5g0442391 25.581 172 120 5 244 411 243 410 8.65e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333420 AT1G10580.1 62.766 376 73 6 78 393 45 413 4.61e-149 436
Msa1333420 AT5G54520.1 33.987 153 98 2 242 393 140 290 7.92e-21 94.7
Msa1333420 AT1G61210.1 32.331 133 84 4 253 384 91 218 1.83e-15 79.3
Msa1333420 AT1G61210.1 31.008 129 82 5 252 378 132 255 2.08e-12 69.7
Msa1333420 AT1G61210.3 32.331 133 84 4 253 384 91 218 1.98e-15 79.3
Msa1333420 AT1G61210.3 31.008 129 82 5 252 378 132 255 2.27e-12 69.7
Msa1333420 AT1G61210.2 32.331 133 84 4 253 384 91 218 2.08e-15 79.3
Msa1333420 AT1G61210.2 31.008 129 82 5 252 378 132 255 2.17e-12 69.7
Msa1333420 AT5G08390.1 33.582 134 81 5 253 384 92 219 3.49e-15 78.2
Msa1333420 AT5G08390.1 32.283 127 83 3 252 378 133 256 3.28e-13 72.0
Msa1333420 AT3G49660.1 31.206 141 90 4 254 392 105 240 3.99e-15 76.3
Msa1333420 AT3G49660.1 28.188 149 96 5 249 391 11 154 1.46e-13 71.6
Msa1333420 AT1G11160.3 30.075 133 87 4 253 384 49 176 1.09e-14 77.0
Msa1333420 AT1G11160.3 30.534 131 80 6 252 378 90 213 6.67e-12 68.2
Msa1333420 AT1G11160.2 30.075 133 87 4 253 384 91 218 1.10e-14 77.0
Msa1333420 AT1G11160.2 30.534 131 80 6 252 378 132 255 7.12e-12 68.2
Msa1333420 AT1G11160.1 30.075 133 87 4 253 384 91 218 1.18e-14 76.6
Msa1333420 AT1G11160.1 30.534 131 80 6 252 378 132 255 7.13e-12 68.2
Msa1333420 AT1G11160.4 30.075 133 87 4 253 384 91 218 1.20e-14 76.6
Msa1333420 AT1G11160.4 30.534 131 80 6 252 378 132 255 7.33e-12 68.2
Msa1333420 AT5G64730.1 30.968 155 97 6 250 400 6 154 1.35e-14 74.7
Msa1333420 AT5G23430.3 32.090 134 83 5 253 384 92 219 1.47e-14 76.3
Msa1333420 AT5G23430.3 29.921 127 86 3 252 378 133 256 7.50e-12 67.8
Msa1333420 AT5G23430.2 32.090 134 83 5 253 384 92 219 1.47e-14 76.3
Msa1333420 AT5G23430.2 29.921 127 86 3 252 378 133 256 7.50e-12 67.8
Msa1333420 AT5G23430.1 32.090 134 83 5 253 384 92 219 1.47e-14 76.3
Msa1333420 AT5G23430.1 29.921 127 86 3 252 378 133 256 7.77e-12 67.8
Msa1333420 AT4G02730.1 27.000 200 132 6 202 391 59 254 1.66e-12 68.6
Msa1333420 AT4G02730.1 28.402 169 111 5 251 417 32 192 2.04e-11 65.5
Msa1333420 AT2G43770.1 30.000 130 89 2 259 388 50 177 9.47e-12 66.6
Msa1333420 AT4G15900.1 36.290 124 71 5 260 381 174 291 1.69e-11 66.2
Msa1333420 AT5G16750.1 34.409 93 57 3 254 344 531 621 6.35e-11 65.1

Find 137 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGCAATAAATTGAAAATT+AGG 0.074405 8_4:-53544849 None:intergenic
AATTAGGGTTCATCCGAATT+TGG 0.147965 8_4:-53544833 None:intergenic
GATTGAGGGAATTCTGAATT+TGG 0.213060 8_4:-53544869 None:intergenic
CATTCTCTTCTTTCTTCTTA+AGG 0.216922 8_4:-53546276 None:intergenic
GGGTTGGTTCGGTGGAGTCC+TGG 0.255899 8_4:-53545849 None:intergenic
AGCATGGTGTCGTCGACTTT+GGG 0.258974 8_4:-53545903 None:intergenic
AAATTGTTTCATGGCAATTT+AGG 0.265357 8_4:-53544739 None:intergenic
ATTCTCTTCTTTCTTCTTAA+GGG 0.283276 8_4:-53546275 None:intergenic
GGTGGAGTCCTGGGTGAATC+AGG 0.287543 8_4:-53545839 None:intergenic
GGGCAATAAATTGAAAATTA+GGG 0.292681 8_4:-53544848 None:intergenic
GGGTGAGAGGGCCTTGGAGG+GGG 0.305331 8_4:-53546018 None:intergenic
GGCAGAACGGGAAGGAGAGG+GGG 0.322530 8_4:-53545877 None:intergenic
TGGATACTAAGGTTAAGATT+TGG 0.323671 8_4:+53546717 Msa1333420:CDS
CAAGAGTATGATCAGCATTT+GGG 0.330357 8_4:+53547025 Msa1333420:CDS
GGATACTAAGGTTAAGATTT+GGG 0.331103 8_4:+53546718 Msa1333420:CDS
GATGGGTTTAGAGAGGGTTT+TGG 0.334072 8_4:-53545945 None:intergenic
TGATAAGAATATTAAGTATT+GGG 0.340716 8_4:+53546847 Msa1333420:CDS
TAAGGGTGAGAGGGCCTTGG+AGG 0.347949 8_4:-53546021 None:intergenic
ATTAGGGTTCATCCGAATTT+GGG 0.348575 8_4:-53544832 None:intergenic
GCTAAACCGTCTTTAGCTTA+AGG 0.350790 8_4:-53546039 None:intergenic
CGATATAACCTGCCCTGTTT+CGG 0.352782 8_4:-53546873 None:intergenic
TGGGTCATTCCAAAGCTGTT+AGG 0.358107 8_4:+53546777 Msa1333420:CDS
CAACCCTACCTATGACCAAC+TGG 0.361291 8_4:+53545994 Msa1333420:CDS
TAGCATGGTGTCGTCGACTT+TGG 0.362731 8_4:-53545904 None:intergenic
TCCCTCAGGGTATGGGAGTA+TGG 0.364907 8_4:+53547111 Msa1333420:CDS
CGGCAGAACGGGAAGGAGAG+GGG 0.365630 8_4:-53545878 None:intergenic
CAAAGAGATTGGTGCATACT+TGG 0.367144 8_4:+53546621 Msa1333420:CDS
TCAAGAGTATGATCAGCATT+TGG 0.367145 8_4:+53547024 Msa1333420:CDS
GCAGAACGGGAAGGAGAGGG+GGG 0.372322 8_4:-53545876 None:intergenic
CGTGTTCATCTTTAGCTTCA+AGG 0.372867 8_4:+53544950 Msa1333420:CDS
ACATTCTGTTTATCCTCATC+CGG 0.374087 8_4:-53546938 None:intergenic
AAGTATTGGGATACCGAAAC+AGG 0.381659 8_4:+53546860 Msa1333420:CDS
GGCGGCAGAACGGGAAGGAG+AGG 0.383203 8_4:-53545880 None:intergenic
CAAAAGGGGTTTCTGCGATT+AGG 0.383880 8_4:+53546654 Msa1333420:CDS
CAAGTATGCACCAATCTCTT+TGG 0.386596 8_4:-53546620 None:intergenic
ACAAATATCCCTAACAGCTT+TGG 0.389574 8_4:-53546786 None:intergenic
CTAAACCGTCTTTAGCTTAA+GGG 0.390215 8_4:-53546038 None:intergenic
GGGTTAAGCTTCACAACATA+AGG 0.392453 8_4:-53546917 None:intergenic
ATTGAGGGAATTCTGAATTT+GGG 0.395524 8_4:-53544868 None:intergenic
AGAATCAAATGACCCGAATT+CGG 0.398493 8_4:-53546683 None:intergenic
TTACTCGCCTTAGCATCTTT+CGG 0.401503 8_4:-53546581 None:intergenic
GGTTGGTTCGGTGGAGTCCT+GGG 0.403987 8_4:-53545848 None:intergenic
AGGGTGAGAGGGCCTTGGAG+GGG 0.413768 8_4:-53546019 None:intergenic
GCTTAAGGGTGAGAGGGCCT+TGG 0.415797 8_4:-53546024 None:intergenic
ATGATAAGAATATTAAGTAT+TGG 0.420715 8_4:+53546846 Msa1333420:CDS
TCTTCTTCTGTTCGCGGTGT+GGG 0.431476 8_4:-53546240 None:intergenic
GGGATTATCAAGGTAGGTCT+TGG 0.431742 8_4:+53546549 Msa1333420:CDS
ATGACAAGTCCCTCAGGGTA+TGG 0.434880 8_4:+53547103 Msa1333420:CDS
GAGTCCTTGGGCTGGGAAGA+AGG 0.437077 8_4:+53546383 Msa1333420:CDS
AATAACCACGCCTCAGAAGC+TGG 0.437350 8_4:-53546348 None:intergenic
GCGGCAGAACGGGAAGGAGA+GGG 0.438693 8_4:-53545879 None:intergenic
TGAAGAATAAGAAGAGTCCT+TGG 0.443248 8_4:+53546370 Msa1333420:CDS
CTCTTCTTCTGTTCGCGGTG+TGG 0.444110 8_4:-53546241 None:intergenic
GTTCAGTGGGATATGAATAC+AGG 0.451594 8_4:+53546992 Msa1333420:CDS
GGGTCATTCCAAAGCTGTTA+GGG 0.454301 8_4:+53546778 Msa1333420:CDS
AGGTTTACAAGGAGAGTTAA+CGG 0.457451 8_4:+53546407 Msa1333420:CDS
GGGCCCAGTTGGTCATAGGT+AGG 0.459914 8_4:-53545998 None:intergenic
GTTATATCGACGTTCTCCAC+TGG 0.463024 8_4:+53546887 Msa1333420:CDS
TTCGGGTCATTTGATTCTCT+CGG 0.463515 8_4:+53546688 Msa1333420:CDS
CGAATTTGGGTGGAAAAGTA+AGG 0.469562 8_4:-53544819 None:intergenic
CAGAACGGGAAGGAGAGGGG+GGG 0.469820 8_4:-53545875 None:intergenic
GAGGAGCACGCCAAGAAGAA+AGG 0.472310 8_4:+53546450 Msa1333420:CDS
CTAGTGATGACAAGTCCCTC+AGG 0.475381 8_4:+53547097 Msa1333420:CDS
TCAACACTGGTAAATGTATG+AGG 0.476160 8_4:+53546747 Msa1333420:CDS
ACTTGGAGCGGACATACAAA+AGG 0.478707 8_4:+53546638 Msa1333420:CDS
AGGCGACAAGGTGTTGAGTT+GGG 0.487361 8_4:-53545970 None:intergenic
CTCGGCTGGTATGGATACTA+AGG 0.491505 8_4:+53546706 Msa1333420:CDS
TTGGGTCGATGGGTTTAGAG+AGG 0.491971 8_4:-53545952 None:intergenic
TTTGATTCTCTCGGCTGGTA+TGG 0.492749 8_4:+53546697 Msa1333420:CDS
AAGGGTGAGAGGGCCTTGGA+GGG 0.500222 8_4:-53546020 None:intergenic
GGTCATTTGATTCTCTCGGC+TGG 0.501830 8_4:+53546692 Msa1333420:CDS
AGGTGTTGAGTTGGGTCGAT+GGG 0.504885 8_4:-53545962 None:intergenic
GTGTTCATCTTTAGCTTCAA+GGG 0.505034 8_4:+53544951 Msa1333420:CDS
TTGGGTTTGATGTGGATTGA+GGG 0.506170 8_4:-53544883 None:intergenic
GGCCCAGTTGGTCATAGGTA+GGG 0.517959 8_4:-53545997 None:intergenic
TTGGTCATAGGTAGGGTTGA+AGG 0.522779 8_4:-53545990 None:intergenic
CATTCTGTTTATCCTCATCC+GGG 0.523411 8_4:-53546937 None:intergenic
CGCGCCTCCGAAAGATGCTA+AGG 0.529557 8_4:+53546574 Msa1333420:CDS
CTAATATACTTTATAACCAC+GGG 0.530865 8_4:-53547138 None:intergenic
CTTGGAGCGGACATACAAAA+GGG 0.531466 8_4:+53546639 Msa1333420:CDS
ATTGGGTTTGATGTGGATTG+AGG 0.532755 8_4:-53544884 None:intergenic
AAGGCGACAAGGTGTTGAGT+TGG 0.535225 8_4:-53545971 None:intergenic
GTGGAGTCCTGGGTGAATCA+GGG 0.538486 8_4:-53545838 None:intergenic
TGATAAGAAGATTGTTCAGT+GGG 0.538924 8_4:+53546979 Msa1333420:CDS
ATAAGAAGAGTCCTTGGGCT+GGG 0.539663 8_4:+53546376 Msa1333420:CDS
GATTGAGAATCCAGCTTCTG+AGG 0.541239 8_4:+53546338 Msa1333420:intron
TTATGTTGTGAAGCTTAACC+CGG 0.541534 8_4:+53546919 Msa1333420:CDS
AAGGTGTTGAGTTGGGTCGA+TGG 0.542762 8_4:-53545963 None:intergenic
TGGGTCGATGGGTTTAGAGA+GGG 0.542777 8_4:-53545951 None:intergenic
GCATGGTGTCGTCGACTTTG+GGG 0.545386 8_4:-53545902 None:intergenic
GAAGAATAAGAAGAGTCCTT+GGG 0.545960 8_4:+53546371 Msa1333420:CDS
GTTGTTATCAACAAAAGTAA+TGG 0.548421 8_4:-53547058 None:intergenic
TGACAAGTCCCTCAGGGTAT+GGG 0.550285 8_4:+53547104 Msa1333420:CDS
TTATATCGACGTTCTCCACT+GGG 0.551618 8_4:+53546888 Msa1333420:CDS
CCTTCCTTCTTCCCAGCCCA+AGG 0.553576 8_4:-53546387 None:intergenic
CACACCGCGAACAGAAGAAG+AGG 0.557884 8_4:+53546242 Msa1333420:CDS
GGTTAAGCTTCACAACATAA+GGG 0.563836 8_4:-53546916 None:intergenic
CCTTGGGCTGGGAAGAAGGA+AGG 0.564772 8_4:+53546387 Msa1333420:CDS
GGGAAGAAGGAAGGTTTACA+AGG 0.566983 8_4:+53546396 Msa1333420:CDS
AATAAGAAGAGTCCTTGGGC+TGG 0.567302 8_4:+53546375 Msa1333420:CDS
AAAGAGGAAAGGGATTATCA+AGG 0.572402 8_4:+53546539 Msa1333420:CDS
TTGGGATACCGAAACAGGGC+AGG 0.573233 8_4:+53546865 Msa1333420:CDS
CAATCCACATCAAACCCAAT+CGG 0.574554 8_4:+53544887 Msa1333420:CDS
GTCTTTAGCTTAAGGGTGAG+AGG 0.576377 8_4:-53546031 None:intergenic
TCGACCGATTGGGTTTGATG+TGG 0.578370 8_4:-53544891 None:intergenic
TGTGAAGCTTAACCCGGATG+AGG 0.580826 8_4:+53546925 Msa1333420:CDS
TAAATGTATGAGGACTTACA+TGG 0.581377 8_4:+53546757 Msa1333420:CDS
AGAATCCAGCTTCTGAGGCG+TGG 0.583927 8_4:+53546343 Msa1333420:CDS
AGGGTTCATCCGAATTTGGG+TGG 0.592292 8_4:-53544829 None:intergenic
ACTAATATACTTTATAACCA+CGG 0.592566 8_4:-53547139 None:intergenic
GGCTACAGTTAGGGTTAGCA+TGG 0.595515 8_4:-53545919 None:intergenic
TCTTTAGCTTAAGGGTGAGA+GGG 0.596324 8_4:-53546030 None:intergenic
CTCGCCTTAGCATCTTTCGG+AGG 0.597269 8_4:-53546578 None:intergenic
CATGGTGTCGTCGACTTTGG+GGG 0.604119 8_4:-53545901 None:intergenic
AGGAAAGGGATTATCAAGGT+AGG 0.608842 8_4:+53546543 Msa1333420:CDS
AAGAGTATGATCAGCATTTG+GGG 0.615907 8_4:+53547026 Msa1333420:CDS
TCTCACCCTTAAGCTAAAGA+CGG 0.622312 8_4:+53546033 Msa1333420:CDS
TTCAGTGGGATATGAATACA+GGG 0.624256 8_4:+53546993 Msa1333420:CDS
AGGTAGGGTTGAAGGCGACA+AGG 0.626351 8_4:-53545982 None:intergenic
ACCATACTCCCATACCCTGA+GGG 0.627909 8_4:-53547112 None:intergenic
TAGTGATGACAAGTCCCTCA+GGG 0.628378 8_4:+53547098 Msa1333420:CDS
AACCCTACCTATGACCAACT+GGG 0.631508 8_4:+53545995 Msa1333420:CDS
CTCAAAACCCTGATTCACCC+AGG 0.641880 8_4:+53545831 Msa1333420:CDS
AGATTGGTGCATACTTGGAG+CGG 0.649087 8_4:+53546626 Msa1333420:CDS
CGTCTGTACCGTCTCCAACA+CGG 0.654419 8_4:-53544926 None:intergenic
GTGATAAGAAGATTGTTCAG+TGG 0.659340 8_4:+53546978 Msa1333420:CDS
ACGACGAAAATAACGACGAG+AGG 0.671191 8_4:+53546308 Msa1333420:CDS
CGACGAAAATAACGACGAGA+GGG 0.675472 8_4:+53546309 Msa1333420:CDS
CTTGAAGCTAAAGATGAACA+CGG 0.677617 8_4:-53544949 None:intergenic
AAATGTATGAGGACTTACAT+GGG 0.686630 8_4:+53546758 Msa1333420:CDS
ATGGGAGTATGGTATTCCCG+TGG 0.688322 8_4:+53547122 Msa1333420:CDS
TTGGAGCGGACATACAAAAG+GGG 0.692861 8_4:+53546640 Msa1333420:CDS
AGTATTGGGATACCGAAACA+GGG 0.695845 8_4:+53546861 Msa1333420:CDS
TACCATACTCCCATACCCTG+AGG 0.704189 8_4:-53547113 None:intergenic
AACATAAGGGATCTTCCCAG+TGG 0.720474 8_4:-53546903 None:intergenic
AGATCAGAAGAAATACGCTG+AGG 0.728271 8_4:+53546431 Msa1333420:CDS
CTGTACCGTCTCCAACACGG+AGG 0.795438 8_4:-53544923 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATAAAATTGTTTCA+TGG - chr8_4:53544751-53544770 None:intergenic 10.0%
!! GTTTATTATTTCATTTAAAT+TGG + chr8_4:53545552-53545571 Msa1333420:intron 10.0%
!!! TTTTTAATAAAATTGTTTCA+TGG - chr8_4:53544751-53544770 None:intergenic 10.0%
!! GTTTATTATTTCATTTAAAT+TGG + chr8_4:53545552-53545571 Msa1333420:intron 10.0%
!!! TGCTTTTTTTTATCATTATT+TGG + chr8_4:53545471-53545490 Msa1333420:intron 15.0%
!! ATGATAAGAATATTAAGTAT+TGG + chr8_4:53546846-53546865 Msa1333420:CDS 15.0%
!! TGATAAGAATATTAAGTATT+GGG + chr8_4:53546847-53546866 Msa1333420:CDS 15.0%
!!! TGCTTTTTTTTATCATTATT+TGG + chr8_4:53545471-53545490 Msa1333420:intron 15.0%
!! ATGATAAGAATATTAAGTAT+TGG + chr8_4:53546846-53546865 Msa1333420:CDS 15.0%
!! TGATAAGAATATTAAGTATT+GGG + chr8_4:53546847-53546866 Msa1333420:CDS 15.0%
!! ATTAAATCCAGAAAAATATC+TGG + chr8_4:53544792-53544811 Msa1333420:five_prime_UTR 20.0%
!! TTAAATCCAGAAAAATATCT+GGG + chr8_4:53544793-53544812 Msa1333420:five_prime_UTR 20.0%
!!! AGAGTTTTAATAGCAATTTA+AGG - chr8_4:53544991-53545010 None:intergenic 20.0%
!!! TTATTTTTGAAATCCGATTT+TGG + chr8_4:53545031-53545050 Msa1333420:intron 20.0%
!! TATGTCTTAATAACCAAAAT+CGG - chr8_4:53545047-53545066 None:intergenic 20.0%
!!! TTTTTATCATTATTTGGCTA+TGG + chr8_4:53545477-53545496 Msa1333420:intron 20.0%
!! AACTTAGAGATAATACTATT+TGG + chr8_4:53545588-53545607 Msa1333420:intron 20.0%
!!! ATTATTGATAATACTGTATG+AGG + chr8_4:53545631-53545650 Msa1333420:intron 20.0%
!!! CATAACACCTTTTTAAAATT+CGG + chr8_4:53546134-53546153 Msa1333420:intron 20.0%
!!! GATATTTGTTTTACTAATGA+TGG + chr8_4:53546800-53546819 Msa1333420:CDS 20.0%
!! ATTAAATCCAGAAAAATATC+TGG + chr8_4:53544792-53544811 Msa1333420:five_prime_UTR 20.0%
!! TTAAATCCAGAAAAATATCT+GGG + chr8_4:53544793-53544812 Msa1333420:five_prime_UTR 20.0%
!!! AGAGTTTTAATAGCAATTTA+AGG - chr8_4:53544991-53545010 None:intergenic 20.0%
!!! TTATTTTTGAAATCCGATTT+TGG + chr8_4:53545031-53545050 Msa1333420:intron 20.0%
!! TATGTCTTAATAACCAAAAT+CGG - chr8_4:53545047-53545066 None:intergenic 20.0%
!!! TTTTTATCATTATTTGGCTA+TGG + chr8_4:53545477-53545496 Msa1333420:intron 20.0%
!! AACTTAGAGATAATACTATT+TGG + chr8_4:53545588-53545607 Msa1333420:intron 20.0%
!!! ATTATTGATAATACTGTATG+AGG + chr8_4:53545631-53545650 Msa1333420:intron 20.0%
!!! CATAACACCTTTTTAAAATT+CGG + chr8_4:53546134-53546153 Msa1333420:intron 20.0%
!!! GATATTTGTTTTACTAATGA+TGG + chr8_4:53546800-53546819 Msa1333420:CDS 20.0%
! AAATTGTTTCATGGCAATTT+AGG - chr8_4:53544742-53544761 None:intergenic 25.0%
! GGGCAATAAATTGAAAATTA+GGG - chr8_4:53544851-53544870 None:intergenic 25.0%
! TGGGCAATAAATTGAAAATT+AGG - chr8_4:53544852-53544871 None:intergenic 25.0%
! CAAGTTTCAAAAACAAGTTT+GGG + chr8_4:53545188-53545207 Msa1333420:intron 25.0%
! AAACAATATAAGCTCTCATA+TGG + chr8_4:53545321-53545340 Msa1333420:intron 25.0%
! AACAATATAAGCTCTCATAT+GGG + chr8_4:53545322-53545341 Msa1333420:intron 25.0%
!!! AATGTTCTTTTGATTGAGAT+GGG + chr8_4:53545418-53545437 Msa1333420:intron 25.0%
! TTTAAATTGGAAATACTGCT+TGG + chr8_4:53545565-53545584 Msa1333420:intron 25.0%
! TAATTAAAGATGAGTGACAA+AGG - chr8_4:53545615-53545634 None:intergenic 25.0%
! GTTGTGAATGTAATTGAAAA+AGG - chr8_4:53545761-53545780 None:intergenic 25.0%
! AATTACATTCACAACAACAA+TGG + chr8_4:53545766-53545785 Msa1333420:intron 25.0%
! ATTCTCTTCTTTCTTCTTAA+GGG - chr8_4:53546278-53546297 None:intergenic 25.0%
!!! TTGTTTTATACCAAAGAGAT+TGG + chr8_4:53546610-53546629 Msa1333420:CDS 25.0%
! GTTGTTATCAACAAAAGTAA+TGG - chr8_4:53547061-53547080 None:intergenic 25.0%
!!! TTACTTTTGTTGATAACAAC+AGG + chr8_4:53547061-53547080 Msa1333420:CDS 25.0%
! AAATTGTTTCATGGCAATTT+AGG - chr8_4:53544742-53544761 None:intergenic 25.0%
! GGGCAATAAATTGAAAATTA+GGG - chr8_4:53544851-53544870 None:intergenic 25.0%
! TGGGCAATAAATTGAAAATT+AGG - chr8_4:53544852-53544871 None:intergenic 25.0%
! CAAGTTTCAAAAACAAGTTT+GGG + chr8_4:53545188-53545207 Msa1333420:intron 25.0%
! AAACAATATAAGCTCTCATA+TGG + chr8_4:53545321-53545340 Msa1333420:intron 25.0%
! AACAATATAAGCTCTCATAT+GGG + chr8_4:53545322-53545341 Msa1333420:intron 25.0%
!!! AATGTTCTTTTGATTGAGAT+GGG + chr8_4:53545418-53545437 Msa1333420:intron 25.0%
! TTTAAATTGGAAATACTGCT+TGG + chr8_4:53545565-53545584 Msa1333420:intron 25.0%
! TAATTAAAGATGAGTGACAA+AGG - chr8_4:53545615-53545634 None:intergenic 25.0%
! GTTGTGAATGTAATTGAAAA+AGG - chr8_4:53545761-53545780 None:intergenic 25.0%
! AATTACATTCACAACAACAA+TGG + chr8_4:53545766-53545785 Msa1333420:intron 25.0%
! ATTCTCTTCTTTCTTCTTAA+GGG - chr8_4:53546278-53546297 None:intergenic 25.0%
!!! TTGTTTTATACCAAAGAGAT+TGG + chr8_4:53546610-53546629 Msa1333420:CDS 25.0%
! GTTGTTATCAACAAAAGTAA+TGG - chr8_4:53547061-53547080 None:intergenic 25.0%
!!! TTACTTTTGTTGATAACAAC+AGG + chr8_4:53547061-53547080 Msa1333420:CDS 25.0%
ATTGAGGGAATTCTGAATTT+GGG - chr8_4:53544871-53544890 None:intergenic 30.0%
! AAGACATATTTTGCTCTGTT+TGG + chr8_4:53545059-53545078 Msa1333420:intron 30.0%
!! TGTTTCTGAAATGTGTTCTT+GGG + chr8_4:53545133-53545152 Msa1333420:intron 30.0%
!!! CCAAACTTGTTTTTGAAACT+TGG - chr8_4:53545190-53545209 None:intergenic 30.0%
CCAAGTTTCAAAAACAAGTT+TGG + chr8_4:53545187-53545206 Msa1333420:intron 30.0%
!! GAATGTTCTTTTGATTGAGA+TGG + chr8_4:53545417-53545436 Msa1333420:intron 30.0%
TTATCATTATTTGGCTATGG+TGG + chr8_4:53545480-53545499 Msa1333420:intron 30.0%
AAACTAACATGAAGCACAAT+AGG - chr8_4:53545536-53545555 None:intergenic 30.0%
AGAAGAAGAAACAACAAGTT+GGG - chr8_4:53545670-53545689 None:intergenic 30.0%
AAGAAGAAGAAACAACAAGT+TGG - chr8_4:53545671-53545690 None:intergenic 30.0%
!! TTGACAGATTTTGAAGAAGA+AGG - chr8_4:53545696-53545715 None:intergenic 30.0%
CATTCTCTTCTTTCTTCTTA+AGG - chr8_4:53546279-53546298 None:intergenic 30.0%
!!! AAGGATAAGAGTACTTTTCA+TGG + chr8_4:53546515-53546534 Msa1333420:CDS 30.0%
!!! AGGATAAGAGTACTTTTCAT+GGG + chr8_4:53546516-53546535 Msa1333420:CDS 30.0%
!!! GATTAGGTTTTTTCCGAATT+CGG + chr8_4:53546670-53546689 Msa1333420:CDS 30.0%
!!! ATTAGGTTTTTTCCGAATTC+GGG + chr8_4:53546671-53546690 Msa1333420:CDS 30.0%
TGGATACTAAGGTTAAGATT+TGG + chr8_4:53546717-53546736 Msa1333420:CDS 30.0%
GGATACTAAGGTTAAGATTT+GGG + chr8_4:53546718-53546737 Msa1333420:CDS 30.0%
TAAATGTATGAGGACTTACA+TGG + chr8_4:53546757-53546776 Msa1333420:CDS 30.0%
AAATGTATGAGGACTTACAT+GGG + chr8_4:53546758-53546777 Msa1333420:CDS 30.0%
! GGATAAACAGAATGTTTTGT+TGG + chr8_4:53546946-53546965 Msa1333420:CDS 30.0%
TGATAAGAAGATTGTTCAGT+GGG + chr8_4:53546979-53546998 Msa1333420:CDS 30.0%
ATTGAGGGAATTCTGAATTT+GGG - chr8_4:53544871-53544890 None:intergenic 30.0%
! AAGACATATTTTGCTCTGTT+TGG + chr8_4:53545059-53545078 Msa1333420:intron 30.0%
!! TGTTTCTGAAATGTGTTCTT+GGG + chr8_4:53545133-53545152 Msa1333420:intron 30.0%
!!! CCAAACTTGTTTTTGAAACT+TGG - chr8_4:53545190-53545209 None:intergenic 30.0%
CCAAGTTTCAAAAACAAGTT+TGG + chr8_4:53545187-53545206 Msa1333420:intron 30.0%
!! GAATGTTCTTTTGATTGAGA+TGG + chr8_4:53545417-53545436 Msa1333420:intron 30.0%
TTATCATTATTTGGCTATGG+TGG + chr8_4:53545480-53545499 Msa1333420:intron 30.0%
AAACTAACATGAAGCACAAT+AGG - chr8_4:53545536-53545555 None:intergenic 30.0%
AGAAGAAGAAACAACAAGTT+GGG - chr8_4:53545670-53545689 None:intergenic 30.0%
AAGAAGAAGAAACAACAAGT+TGG - chr8_4:53545671-53545690 None:intergenic 30.0%
!! TTGACAGATTTTGAAGAAGA+AGG - chr8_4:53545696-53545715 None:intergenic 30.0%
CATTCTCTTCTTTCTTCTTA+AGG - chr8_4:53546279-53546298 None:intergenic 30.0%
!!! AAGGATAAGAGTACTTTTCA+TGG + chr8_4:53546515-53546534 Msa1333420:CDS 30.0%
!!! AGGATAAGAGTACTTTTCAT+GGG + chr8_4:53546516-53546535 Msa1333420:CDS 30.0%
!!! GATTAGGTTTTTTCCGAATT+CGG + chr8_4:53546670-53546689 Msa1333420:CDS 30.0%
!!! ATTAGGTTTTTTCCGAATTC+GGG + chr8_4:53546671-53546690 Msa1333420:CDS 30.0%
TGGATACTAAGGTTAAGATT+TGG + chr8_4:53546717-53546736 Msa1333420:CDS 30.0%
GGATACTAAGGTTAAGATTT+GGG + chr8_4:53546718-53546737 Msa1333420:CDS 30.0%
TAAATGTATGAGGACTTACA+TGG + chr8_4:53546757-53546776 Msa1333420:CDS 30.0%
AAATGTATGAGGACTTACAT+GGG + chr8_4:53546758-53546777 Msa1333420:CDS 30.0%
! GGATAAACAGAATGTTTTGT+TGG + chr8_4:53546946-53546965 Msa1333420:CDS 30.0%
TGATAAGAAGATTGTTCAGT+GGG + chr8_4:53546979-53546998 Msa1333420:CDS 30.0%
!! CTTACTTTTCCACCCAAATT+CGG + chr8_4:53544820-53544839 Msa1333420:five_prime_UTR 35.0%
ATTAGGGTTCATCCGAATTT+GGG - chr8_4:53544835-53544854 None:intergenic 35.0%
AATTAGGGTTCATCCGAATT+TGG - chr8_4:53544836-53544855 None:intergenic 35.0%
GATTGAGGGAATTCTGAATT+TGG - chr8_4:53544872-53544891 None:intergenic 35.0%
!!! GTTTTTAGAATCGACCGATT+GGG - chr8_4:53544904-53544923 None:intergenic 35.0%
CTTGAAGCTAAAGATGAACA+CGG - chr8_4:53544952-53544971 None:intergenic 35.0%
! GTGTTCATCTTTAGCTTCAA+GGG + chr8_4:53544951-53544970 Msa1333420:CDS 35.0%
! GCTCTGTTTGGATTATGTTT+TGG + chr8_4:53545071-53545090 Msa1333420:intron 35.0%
GAACACATTTCAGAAACACA+GGG - chr8_4:53545131-53545150 None:intergenic 35.0%
AGAACACATTTCAGAAACAC+AGG - chr8_4:53545132-53545151 None:intergenic 35.0%
!! GTGTTTCTGAAATGTGTTCT+TGG + chr8_4:53545132-53545151 Msa1333420:intron 35.0%
TGTTCTTGGGTTCTTTACAT+AGG + chr8_4:53545146-53545165 Msa1333420:intron 35.0%
GTTCTTGGGTTCTTTACATA+GGG + chr8_4:53545147-53545166 Msa1333420:intron 35.0%
AGTGTTGTCAGATTCTTGAA+TGG - chr8_4:53545447-53545466 None:intergenic 35.0%
! CTAAACCGTCTTTAGCTTAA+GGG - chr8_4:53546041-53546060 None:intergenic 35.0%
TGTTATGCTGTTCATCAAAG+AGG - chr8_4:53546121-53546140 None:intergenic 35.0%
!! CAGCGTACCGAATTTTAAAA+AGG - chr8_4:53546144-53546163 None:intergenic 35.0%
CCTTCTGCGTTAAATTACAT+CGG + chr8_4:53546169-53546188 Msa1333420:intron 35.0%
TGAAGAATAAGAAGAGTCCT+TGG + chr8_4:53546370-53546389 Msa1333420:CDS 35.0%
GAAGAATAAGAAGAGTCCTT+GGG + chr8_4:53546371-53546390 Msa1333420:CDS 35.0%
AGGTTTACAAGGAGAGTTAA+CGG + chr8_4:53546407-53546426 Msa1333420:CDS 35.0%
! TTTTTCTTCGCCTTTCTTCT+TGG - chr8_4:53546463-53546482 None:intergenic 35.0%
!!! TTTTGGTGGTGAAAAAGTTG+AGG + chr8_4:53546487-53546506 Msa1333420:intron 35.0%
TGAAAAAGTTGAGGCTGTTA+AGG + chr8_4:53546496-53546515 Msa1333420:intron 35.0%
! TTTTCATGGGAAAGAGGAAA+GGG + chr8_4:53546529-53546548 Msa1333420:CDS 35.0%
AAAGAGGAAAGGGATTATCA+AGG + chr8_4:53546539-53546558 Msa1333420:CDS 35.0%
AGAATCAAATGACCCGAATT+CGG - chr8_4:53546686-53546705 None:intergenic 35.0%
!! ATTTGGGATGTTTTCAACAC+TGG + chr8_4:53546734-53546753 Msa1333420:CDS 35.0%
TCAACACTGGTAAATGTATG+AGG + chr8_4:53546747-53546766 Msa1333420:CDS 35.0%
ACAAATATCCCTAACAGCTT+TGG - chr8_4:53546789-53546808 None:intergenic 35.0%
GGTTAAGCTTCACAACATAA+GGG - chr8_4:53546919-53546938 None:intergenic 35.0%
TTATGTTGTGAAGCTTAACC+CGG + chr8_4:53546919-53546938 Msa1333420:CDS 35.0%
ACATTCTGTTTATCCTCATC+CGG - chr8_4:53546941-53546960 None:intergenic 35.0%
!! AAACAGAATGTTTTGTTGGC+TGG + chr8_4:53546950-53546969 Msa1333420:CDS 35.0%
GTGATAAGAAGATTGTTCAG+TGG + chr8_4:53546978-53546997 Msa1333420:CDS 35.0%
TTCAGTGGGATATGAATACA+GGG + chr8_4:53546993-53547012 Msa1333420:CDS 35.0%
! TCAAGAGTATGATCAGCATT+TGG + chr8_4:53547024-53547043 Msa1333420:CDS 35.0%
! CAAGAGTATGATCAGCATTT+GGG + chr8_4:53547025-53547044 Msa1333420:CDS 35.0%
! AAGAGTATGATCAGCATTTG+GGG + chr8_4:53547026-53547045 Msa1333420:CDS 35.0%
!! CTTACTTTTCCACCCAAATT+CGG + chr8_4:53544820-53544839 Msa1333420:five_prime_UTR 35.0%
ATTAGGGTTCATCCGAATTT+GGG - chr8_4:53544835-53544854 None:intergenic 35.0%
AATTAGGGTTCATCCGAATT+TGG - chr8_4:53544836-53544855 None:intergenic 35.0%
GATTGAGGGAATTCTGAATT+TGG - chr8_4:53544872-53544891 None:intergenic 35.0%
!!! GTTTTTAGAATCGACCGATT+GGG - chr8_4:53544904-53544923 None:intergenic 35.0%
CTTGAAGCTAAAGATGAACA+CGG - chr8_4:53544952-53544971 None:intergenic 35.0%
! GTGTTCATCTTTAGCTTCAA+GGG + chr8_4:53544951-53544970 Msa1333420:CDS 35.0%
! GCTCTGTTTGGATTATGTTT+TGG + chr8_4:53545071-53545090 Msa1333420:intron 35.0%
GAACACATTTCAGAAACACA+GGG - chr8_4:53545131-53545150 None:intergenic 35.0%
AGAACACATTTCAGAAACAC+AGG - chr8_4:53545132-53545151 None:intergenic 35.0%
!! GTGTTTCTGAAATGTGTTCT+TGG + chr8_4:53545132-53545151 Msa1333420:intron 35.0%
TGTTCTTGGGTTCTTTACAT+AGG + chr8_4:53545146-53545165 Msa1333420:intron 35.0%
GTTCTTGGGTTCTTTACATA+GGG + chr8_4:53545147-53545166 Msa1333420:intron 35.0%
AGTGTTGTCAGATTCTTGAA+TGG - chr8_4:53545447-53545466 None:intergenic 35.0%
! CTAAACCGTCTTTAGCTTAA+GGG - chr8_4:53546041-53546060 None:intergenic 35.0%
TGTTATGCTGTTCATCAAAG+AGG - chr8_4:53546121-53546140 None:intergenic 35.0%
!! CAGCGTACCGAATTTTAAAA+AGG - chr8_4:53546144-53546163 None:intergenic 35.0%
CCTTCTGCGTTAAATTACAT+CGG + chr8_4:53546169-53546188 Msa1333420:intron 35.0%
TGAAGAATAAGAAGAGTCCT+TGG + chr8_4:53546370-53546389 Msa1333420:CDS 35.0%
GAAGAATAAGAAGAGTCCTT+GGG + chr8_4:53546371-53546390 Msa1333420:CDS 35.0%
AGGTTTACAAGGAGAGTTAA+CGG + chr8_4:53546407-53546426 Msa1333420:CDS 35.0%
! TTTTTCTTCGCCTTTCTTCT+TGG - chr8_4:53546463-53546482 None:intergenic 35.0%
!!! TTTTGGTGGTGAAAAAGTTG+AGG + chr8_4:53546487-53546506 Msa1333420:intron 35.0%
TGAAAAAGTTGAGGCTGTTA+AGG + chr8_4:53546496-53546515 Msa1333420:intron 35.0%
! TTTTCATGGGAAAGAGGAAA+GGG + chr8_4:53546529-53546548 Msa1333420:CDS 35.0%
AAAGAGGAAAGGGATTATCA+AGG + chr8_4:53546539-53546558 Msa1333420:CDS 35.0%
AGAATCAAATGACCCGAATT+CGG - chr8_4:53546686-53546705 None:intergenic 35.0%
!! ATTTGGGATGTTTTCAACAC+TGG + chr8_4:53546734-53546753 Msa1333420:CDS 35.0%
TCAACACTGGTAAATGTATG+AGG + chr8_4:53546747-53546766 Msa1333420:CDS 35.0%
ACAAATATCCCTAACAGCTT+TGG - chr8_4:53546789-53546808 None:intergenic 35.0%
GGTTAAGCTTCACAACATAA+GGG - chr8_4:53546919-53546938 None:intergenic 35.0%
TTATGTTGTGAAGCTTAACC+CGG + chr8_4:53546919-53546938 Msa1333420:CDS 35.0%
ACATTCTGTTTATCCTCATC+CGG - chr8_4:53546941-53546960 None:intergenic 35.0%
!! AAACAGAATGTTTTGTTGGC+TGG + chr8_4:53546950-53546969 Msa1333420:CDS 35.0%
GTGATAAGAAGATTGTTCAG+TGG + chr8_4:53546978-53546997 Msa1333420:CDS 35.0%
TTCAGTGGGATATGAATACA+GGG + chr8_4:53546993-53547012 Msa1333420:CDS 35.0%
! TCAAGAGTATGATCAGCATT+TGG + chr8_4:53547024-53547043 Msa1333420:CDS 35.0%
! CAAGAGTATGATCAGCATTT+GGG + chr8_4:53547025-53547044 Msa1333420:CDS 35.0%
! AAGAGTATGATCAGCATTTG+GGG + chr8_4:53547026-53547045 Msa1333420:CDS 35.0%
! AGGAGACCCAGATATTTTTC+TGG - chr8_4:53544802-53544821 None:intergenic 40.0%
CGAATTTGGGTGGAAAAGTA+AGG - chr8_4:53544822-53544841 None:intergenic 40.0%
! TTGGGTTTGATGTGGATTGA+GGG - chr8_4:53544886-53544905 None:intergenic 40.0%
! ATTGGGTTTGATGTGGATTG+AGG - chr8_4:53544887-53544906 None:intergenic 40.0%
CAATCCACATCAAACCCAAT+CGG + chr8_4:53544887-53544906 Msa1333420:CDS 40.0%
!!! GGTTTTTAGAATCGACCGAT+TGG - chr8_4:53544905-53544924 None:intergenic 40.0%
! GATTCTAAAAACCTCCGTGT+TGG + chr8_4:53544912-53544931 Msa1333420:CDS 40.0%
! CGTGTTCATCTTTAGCTTCA+AGG + chr8_4:53544950-53544969 Msa1333420:CDS 40.0%
GTACCAAAATTAAGCCCATC+AGG - chr8_4:53545506-53545525 None:intergenic 40.0%
!! GGGCTTAATTTTGGTACTGT+TGG + chr8_4:53545509-53545528 Msa1333420:intron 40.0%
GATAATACTGTATGAGGCGA+TGG + chr8_4:53545637-53545656 Msa1333420:intron 40.0%
! ATGGGTTTAGAGAGGGTTTT+GGG - chr8_4:53545947-53545966 None:intergenic 40.0%
! TCTTTAGCTTAAGGGTGAGA+GGG - chr8_4:53546033-53546052 None:intergenic 40.0%
TCTCACCCTTAAGCTAAAGA+CGG + chr8_4:53546033-53546052 Msa1333420:CDS 40.0%
! GCTAAACCGTCTTTAGCTTA+AGG - chr8_4:53546042-53546061 None:intergenic 40.0%
TTTGTGGTTACGCATACCTT+GGG - chr8_4:53546064-53546083 None:intergenic 40.0%
ATTTGTGGTTACGCATACCT+TGG - chr8_4:53546065-53546084 None:intergenic 40.0%
AGGTATGCGTAACCACAAAT+TGG + chr8_4:53546065-53546084 Msa1333420:intron 40.0%
TCTTCGACGAAACCAATTTG+TGG - chr8_4:53546080-53546099 None:intergenic 40.0%
TGCTGTTCATCAAAGAGGAA+AGG - chr8_4:53546116-53546135 None:intergenic 40.0%
CCGATGTAATTTAACGCAGA+AGG - chr8_4:53546172-53546191 None:intergenic 40.0%
! TTTTCCTCTTCTTCTGTTCG+CGG - chr8_4:53546249-53546268 None:intergenic 40.0%
AGATCAGAAGAAATACGCTG+AGG + chr8_4:53546431-53546450 Msa1333420:CDS 40.0%
GAAGAAAGGCGAAGAAAAAG+TGG + chr8_4:53546464-53546483 Msa1333420:CDS 40.0%
! AGGCGAAGAAAAAGTGGTTT+TGG + chr8_4:53546470-53546489 Msa1333420:CDS 40.0%
!!! CGAAGAAAAAGTGGTTTTGG+TGG + chr8_4:53546473-53546492 Msa1333420:CDS 40.0%
! GAGTACTTTTCATGGGAAAG+AGG + chr8_4:53546523-53546542 Msa1333420:CDS 40.0%
! CTTTTCATGGGAAAGAGGAA+AGG + chr8_4:53546528-53546547 Msa1333420:CDS 40.0%
AGGAAAGGGATTATCAAGGT+AGG + chr8_4:53546543-53546562 Msa1333420:CDS 40.0%
TTACTCGCCTTAGCATCTTT+CGG - chr8_4:53546584-53546603 None:intergenic 40.0%
CAAGTATGCACCAATCTCTT+TGG - chr8_4:53546623-53546642 None:intergenic 40.0%
CAAAGAGATTGGTGCATACT+TGG + chr8_4:53546621-53546640 Msa1333420:CDS 40.0%
TTCGGGTCATTTGATTCTCT+CGG + chr8_4:53546688-53546707 Msa1333420:CDS 40.0%
!!! GGAACAAAGTTTTTGAGTGC+TGG + chr8_4:53546821-53546840 Msa1333420:CDS 40.0%
!! AAGTATTGGGATACCGAAAC+AGG + chr8_4:53546860-53546879 Msa1333420:CDS 40.0%
! AGTATTGGGATACCGAAACA+GGG + chr8_4:53546861-53546880 Msa1333420:CDS 40.0%
TTATATCGACGTTCTCCACT+GGG + chr8_4:53546888-53546907 Msa1333420:CDS 40.0%
GGGTTAAGCTTCACAACATA+AGG - chr8_4:53546920-53546939 None:intergenic 40.0%
CATTCTGTTTATCCTCATCC+GGG - chr8_4:53546940-53546959 None:intergenic 40.0%
GTTCAGTGGGATATGAATAC+AGG + chr8_4:53546992-53547011 Msa1333420:CDS 40.0%
! AGGAGACCCAGATATTTTTC+TGG - chr8_4:53544802-53544821 None:intergenic 40.0%
CGAATTTGGGTGGAAAAGTA+AGG - chr8_4:53544822-53544841 None:intergenic 40.0%
! TTGGGTTTGATGTGGATTGA+GGG - chr8_4:53544886-53544905 None:intergenic 40.0%
! ATTGGGTTTGATGTGGATTG+AGG - chr8_4:53544887-53544906 None:intergenic 40.0%
CAATCCACATCAAACCCAAT+CGG + chr8_4:53544887-53544906 Msa1333420:CDS 40.0%
!!! GGTTTTTAGAATCGACCGAT+TGG - chr8_4:53544905-53544924 None:intergenic 40.0%
! GATTCTAAAAACCTCCGTGT+TGG + chr8_4:53544912-53544931 Msa1333420:CDS 40.0%
! CGTGTTCATCTTTAGCTTCA+AGG + chr8_4:53544950-53544969 Msa1333420:CDS 40.0%
GTACCAAAATTAAGCCCATC+AGG - chr8_4:53545506-53545525 None:intergenic 40.0%
!! GGGCTTAATTTTGGTACTGT+TGG + chr8_4:53545509-53545528 Msa1333420:intron 40.0%
GATAATACTGTATGAGGCGA+TGG + chr8_4:53545637-53545656 Msa1333420:intron 40.0%
! ATGGGTTTAGAGAGGGTTTT+GGG - chr8_4:53545947-53545966 None:intergenic 40.0%
! TCTTTAGCTTAAGGGTGAGA+GGG - chr8_4:53546033-53546052 None:intergenic 40.0%
TCTCACCCTTAAGCTAAAGA+CGG + chr8_4:53546033-53546052 Msa1333420:CDS 40.0%
! GCTAAACCGTCTTTAGCTTA+AGG - chr8_4:53546042-53546061 None:intergenic 40.0%
TTTGTGGTTACGCATACCTT+GGG - chr8_4:53546064-53546083 None:intergenic 40.0%
ATTTGTGGTTACGCATACCT+TGG - chr8_4:53546065-53546084 None:intergenic 40.0%
AGGTATGCGTAACCACAAAT+TGG + chr8_4:53546065-53546084 Msa1333420:intron 40.0%
TCTTCGACGAAACCAATTTG+TGG - chr8_4:53546080-53546099 None:intergenic 40.0%
TGCTGTTCATCAAAGAGGAA+AGG - chr8_4:53546116-53546135 None:intergenic 40.0%
CCGATGTAATTTAACGCAGA+AGG - chr8_4:53546172-53546191 None:intergenic 40.0%
! TTTTCCTCTTCTTCTGTTCG+CGG - chr8_4:53546249-53546268 None:intergenic 40.0%
AGATCAGAAGAAATACGCTG+AGG + chr8_4:53546431-53546450 Msa1333420:CDS 40.0%
GAAGAAAGGCGAAGAAAAAG+TGG + chr8_4:53546464-53546483 Msa1333420:CDS 40.0%
! AGGCGAAGAAAAAGTGGTTT+TGG + chr8_4:53546470-53546489 Msa1333420:CDS 40.0%
!!! CGAAGAAAAAGTGGTTTTGG+TGG + chr8_4:53546473-53546492 Msa1333420:CDS 40.0%
! GAGTACTTTTCATGGGAAAG+AGG + chr8_4:53546523-53546542 Msa1333420:CDS 40.0%
! CTTTTCATGGGAAAGAGGAA+AGG + chr8_4:53546528-53546547 Msa1333420:CDS 40.0%
AGGAAAGGGATTATCAAGGT+AGG + chr8_4:53546543-53546562 Msa1333420:CDS 40.0%
TTACTCGCCTTAGCATCTTT+CGG - chr8_4:53546584-53546603 None:intergenic 40.0%
CAAGTATGCACCAATCTCTT+TGG - chr8_4:53546623-53546642 None:intergenic 40.0%
CAAAGAGATTGGTGCATACT+TGG + chr8_4:53546621-53546640 Msa1333420:CDS 40.0%
TTCGGGTCATTTGATTCTCT+CGG + chr8_4:53546688-53546707 Msa1333420:CDS 40.0%
!!! GGAACAAAGTTTTTGAGTGC+TGG + chr8_4:53546821-53546840 Msa1333420:CDS 40.0%
!! AAGTATTGGGATACCGAAAC+AGG + chr8_4:53546860-53546879 Msa1333420:CDS 40.0%
! AGTATTGGGATACCGAAACA+GGG + chr8_4:53546861-53546880 Msa1333420:CDS 40.0%
TTATATCGACGTTCTCCACT+GGG + chr8_4:53546888-53546907 Msa1333420:CDS 40.0%
GGGTTAAGCTTCACAACATA+AGG - chr8_4:53546920-53546939 None:intergenic 40.0%
CATTCTGTTTATCCTCATCC+GGG - chr8_4:53546940-53546959 None:intergenic 40.0%
GTTCAGTGGGATATGAATAC+AGG + chr8_4:53546992-53547011 Msa1333420:CDS 40.0%
AAAAACCTCCGTGTTGGAGA+CGG + chr8_4:53544918-53544937 Msa1333420:CDS 45.0%
TTCTTTACATAGGGCAGTCG+AGG + chr8_4:53545156-53545175 Msa1333420:intron 45.0%
ACCCATACAAGCTCTTGCAT+GGG + chr8_4:53545290-53545309 Msa1333420:intron 45.0%
ACCCATGCAAGAGCTTGTAT+GGG - chr8_4:53545294-53545313 None:intergenic 45.0%
!!! TGGCCTGATGGGCTTAATTT+TGG + chr8_4:53545500-53545519 Msa1333420:intron 45.0%
!!! GGTGAATCAGGGTTTTGAGT+TGG - chr8_4:53545830-53545849 None:intergenic 45.0%
! TGGGTTTAGAGAGGGTTTTG+GGG - chr8_4:53545946-53545965 None:intergenic 45.0%
!! GATGGGTTTAGAGAGGGTTT+TGG - chr8_4:53545948-53545967 None:intergenic 45.0%
TTGGTCATAGGTAGGGTTGA+AGG - chr8_4:53545993-53546012 None:intergenic 45.0%
AACCCTACCTATGACCAACT+GGG + chr8_4:53545995-53546014 Msa1333420:CDS 45.0%
! GTCTTTAGCTTAAGGGTGAG+AGG - chr8_4:53546034-53546053 None:intergenic 45.0%
AGCAGCGTTATTCTTCTGCA+AGG - chr8_4:53546206-53546225 None:intergenic 45.0%
ACGACGAAAATAACGACGAG+AGG + chr8_4:53546308-53546327 Msa1333420:CDS 45.0%
CGACGAAAATAACGACGAGA+GGG + chr8_4:53546309-53546328 Msa1333420:CDS 45.0%
GATTGAGAATCCAGCTTCTG+AGG + chr8_4:53546338-53546357 Msa1333420:intron 45.0%
AATAAGAAGAGTCCTTGGGC+TGG + chr8_4:53546375-53546394 Msa1333420:CDS 45.0%
ATAAGAAGAGTCCTTGGGCT+GGG + chr8_4:53546376-53546395 Msa1333420:CDS 45.0%
GGGAAGAAGGAAGGTTTACA+AGG + chr8_4:53546396-53546415 Msa1333420:CDS 45.0%
GGGATTATCAAGGTAGGTCT+TGG + chr8_4:53546549-53546568 Msa1333420:CDS 45.0%
AGATTGGTGCATACTTGGAG+CGG + chr8_4:53546626-53546645 Msa1333420:CDS 45.0%
ACTTGGAGCGGACATACAAA+AGG + chr8_4:53546638-53546657 Msa1333420:CDS 45.0%
CTTGGAGCGGACATACAAAA+GGG + chr8_4:53546639-53546658 Msa1333420:CDS 45.0%
TTGGAGCGGACATACAAAAG+GGG + chr8_4:53546640-53546659 Msa1333420:CDS 45.0%
CAAAAGGGGTTTCTGCGATT+AGG + chr8_4:53546654-53546673 Msa1333420:CDS 45.0%
TTTGATTCTCTCGGCTGGTA+TGG + chr8_4:53546697-53546716 Msa1333420:CDS 45.0%
TGGGTCATTCCAAAGCTGTT+AGG + chr8_4:53546777-53546796 Msa1333420:CDS 45.0%
GGGTCATTCCAAAGCTGTTA+GGG + chr8_4:53546778-53546797 Msa1333420:CDS 45.0%
CGATATAACCTGCCCTGTTT+CGG - chr8_4:53546876-53546895 None:intergenic 45.0%
GTTATATCGACGTTCTCCAC+TGG + chr8_4:53546887-53546906 Msa1333420:CDS 45.0%
AACATAAGGGATCTTCCCAG+TGG - chr8_4:53546906-53546925 None:intergenic 45.0%
TAGTGATGACAAGTCCCTCA+GGG + chr8_4:53547098-53547117 Msa1333420:CDS 45.0%
AAAAACCTCCGTGTTGGAGA+CGG + chr8_4:53544918-53544937 Msa1333420:CDS 45.0%
TTCTTTACATAGGGCAGTCG+AGG + chr8_4:53545156-53545175 Msa1333420:intron 45.0%
ACCCATACAAGCTCTTGCAT+GGG + chr8_4:53545290-53545309 Msa1333420:intron 45.0%
ACCCATGCAAGAGCTTGTAT+GGG - chr8_4:53545294-53545313 None:intergenic 45.0%
!!! TGGCCTGATGGGCTTAATTT+TGG + chr8_4:53545500-53545519 Msa1333420:intron 45.0%
!!! GGTGAATCAGGGTTTTGAGT+TGG - chr8_4:53545830-53545849 None:intergenic 45.0%
! TGGGTTTAGAGAGGGTTTTG+GGG - chr8_4:53545946-53545965 None:intergenic 45.0%
!! GATGGGTTTAGAGAGGGTTT+TGG - chr8_4:53545948-53545967 None:intergenic 45.0%
TTGGTCATAGGTAGGGTTGA+AGG - chr8_4:53545993-53546012 None:intergenic 45.0%
AACCCTACCTATGACCAACT+GGG + chr8_4:53545995-53546014 Msa1333420:CDS 45.0%
! GTCTTTAGCTTAAGGGTGAG+AGG - chr8_4:53546034-53546053 None:intergenic 45.0%
AGCAGCGTTATTCTTCTGCA+AGG - chr8_4:53546206-53546225 None:intergenic 45.0%
ACGACGAAAATAACGACGAG+AGG + chr8_4:53546308-53546327 Msa1333420:CDS 45.0%
CGACGAAAATAACGACGAGA+GGG + chr8_4:53546309-53546328 Msa1333420:CDS 45.0%
GATTGAGAATCCAGCTTCTG+AGG + chr8_4:53546338-53546357 Msa1333420:intron 45.0%
AATAAGAAGAGTCCTTGGGC+TGG + chr8_4:53546375-53546394 Msa1333420:CDS 45.0%
ATAAGAAGAGTCCTTGGGCT+GGG + chr8_4:53546376-53546395 Msa1333420:CDS 45.0%
GGGAAGAAGGAAGGTTTACA+AGG + chr8_4:53546396-53546415 Msa1333420:CDS 45.0%
GGGATTATCAAGGTAGGTCT+TGG + chr8_4:53546549-53546568 Msa1333420:CDS 45.0%
AGATTGGTGCATACTTGGAG+CGG + chr8_4:53546626-53546645 Msa1333420:CDS 45.0%
ACTTGGAGCGGACATACAAA+AGG + chr8_4:53546638-53546657 Msa1333420:CDS 45.0%
CTTGGAGCGGACATACAAAA+GGG + chr8_4:53546639-53546658 Msa1333420:CDS 45.0%
TTGGAGCGGACATACAAAAG+GGG + chr8_4:53546640-53546659 Msa1333420:CDS 45.0%
CAAAAGGGGTTTCTGCGATT+AGG + chr8_4:53546654-53546673 Msa1333420:CDS 45.0%
TTTGATTCTCTCGGCTGGTA+TGG + chr8_4:53546697-53546716 Msa1333420:CDS 45.0%
TGGGTCATTCCAAAGCTGTT+AGG + chr8_4:53546777-53546796 Msa1333420:CDS 45.0%
GGGTCATTCCAAAGCTGTTA+GGG + chr8_4:53546778-53546797 Msa1333420:CDS 45.0%
CGATATAACCTGCCCTGTTT+CGG - chr8_4:53546876-53546895 None:intergenic 45.0%
GTTATATCGACGTTCTCCAC+TGG + chr8_4:53546887-53546906 Msa1333420:CDS 45.0%
AACATAAGGGATCTTCCCAG+TGG - chr8_4:53546906-53546925 None:intergenic 45.0%
TAGTGATGACAAGTCCCTCA+GGG + chr8_4:53547098-53547117 Msa1333420:CDS 45.0%
AGGGTTCATCCGAATTTGGG+TGG - chr8_4:53544832-53544851 None:intergenic 50.0%
TCGACCGATTGGGTTTGATG+TGG - chr8_4:53544894-53544913 None:intergenic 50.0%
GACCCATACAAGCTCTTGCA+TGG + chr8_4:53545289-53545308 Msa1333420:intron 50.0%
GACCCATGCAAGAGCTTGTA+TGG - chr8_4:53545295-53545314 None:intergenic 50.0%
ATTTGGCTATGGTGGCCTGA+TGG + chr8_4:53545488-53545507 Msa1333420:intron 50.0%
TTTGGCTATGGTGGCCTGAT+GGG + chr8_4:53545489-53545508 Msa1333420:intron 50.0%
CTGGATCGTTGTCGGAGTAT+TGG - chr8_4:53545802-53545821 None:intergenic 50.0%
CAATACTCCGACAACGATCC+AGG + chr8_4:53545800-53545819 Msa1333420:intron 50.0%
TGGTGAACCTGGATCGTTGT+CGG - chr8_4:53545810-53545829 None:intergenic 50.0%
!!! GGGTTTTGAGTTGGTGAACC+TGG - chr8_4:53545821-53545840 None:intergenic 50.0%
CTCAAAACCCTGATTCACCC+AGG + chr8_4:53545831-53545850 Msa1333420:CDS 50.0%
!! AGCATGGTGTCGTCGACTTT+GGG - chr8_4:53545906-53545925 None:intergenic 50.0%
!! TAGCATGGTGTCGTCGACTT+TGG - chr8_4:53545907-53545926 None:intergenic 50.0%
! GGCTACAGTTAGGGTTAGCA+TGG - chr8_4:53545922-53545941 None:intergenic 50.0%
!!! TTTTGGGGCGGCTACAGTTA+GGG - chr8_4:53545931-53545950 None:intergenic 50.0%
!!! GTTTAGAGAGGGTTTTGGGG+CGG - chr8_4:53545943-53545962 None:intergenic 50.0%
! TGGGTCGATGGGTTTAGAGA+GGG - chr8_4:53545954-53545973 None:intergenic 50.0%
! TTGGGTCGATGGGTTTAGAG+AGG - chr8_4:53545955-53545974 None:intergenic 50.0%
!! AGGTGTTGAGTTGGGTCGAT+GGG - chr8_4:53545965-53545984 None:intergenic 50.0%
!! AAGGTGTTGAGTTGGGTCGA+TGG - chr8_4:53545966-53545985 None:intergenic 50.0%
!! AGGCGACAAGGTGTTGAGTT+GGG - chr8_4:53545973-53545992 None:intergenic 50.0%
!! AAGGCGACAAGGTGTTGAGT+TGG - chr8_4:53545974-53545993 None:intergenic 50.0%
CAACCCTACCTATGACCAAC+TGG + chr8_4:53545994-53546013 Msa1333420:CDS 50.0%
GCTAAAGACGGTTTAGCCCA+AGG + chr8_4:53546045-53546064 Msa1333420:intron 50.0%
TCTTCTTCTGTTCGCGGTGT+GGG - chr8_4:53546243-53546262 None:intergenic 50.0%
AATAACCACGCCTCAGAAGC+TGG - chr8_4:53546351-53546370 None:intergenic 50.0%
GGTCATTTGATTCTCTCGGC+TGG + chr8_4:53546692-53546711 Msa1333420:CDS 50.0%
CTCGGCTGGTATGGATACTA+AGG + chr8_4:53546706-53546725 Msa1333420:CDS 50.0%
TGTGAAGCTTAACCCGGATG+AGG + chr8_4:53546925-53546944 Msa1333420:CDS 50.0%
CTAGTGATGACAAGTCCCTC+AGG + chr8_4:53547097-53547116 Msa1333420:CDS 50.0%
ATGACAAGTCCCTCAGGGTA+TGG + chr8_4:53547103-53547122 Msa1333420:CDS 50.0%
TGACAAGTCCCTCAGGGTAT+GGG + chr8_4:53547104-53547123 Msa1333420:CDS 50.0%
ACCATACTCCCATACCCTGA+GGG - chr8_4:53547115-53547134 None:intergenic 50.0%
TACCATACTCCCATACCCTG+AGG - chr8_4:53547116-53547135 None:intergenic 50.0%
! ATGGGAGTATGGTATTCCCG+TGG + chr8_4:53547122-53547141 Msa1333420:CDS 50.0%
AGGGTTCATCCGAATTTGGG+TGG - chr8_4:53544832-53544851 None:intergenic 50.0%
TCGACCGATTGGGTTTGATG+TGG - chr8_4:53544894-53544913 None:intergenic 50.0%
GACCCATACAAGCTCTTGCA+TGG + chr8_4:53545289-53545308 Msa1333420:intron 50.0%
GACCCATGCAAGAGCTTGTA+TGG - chr8_4:53545295-53545314 None:intergenic 50.0%
ATTTGGCTATGGTGGCCTGA+TGG + chr8_4:53545488-53545507 Msa1333420:intron 50.0%
TTTGGCTATGGTGGCCTGAT+GGG + chr8_4:53545489-53545508 Msa1333420:intron 50.0%
CTGGATCGTTGTCGGAGTAT+TGG - chr8_4:53545802-53545821 None:intergenic 50.0%
CAATACTCCGACAACGATCC+AGG + chr8_4:53545800-53545819 Msa1333420:intron 50.0%
TGGTGAACCTGGATCGTTGT+CGG - chr8_4:53545810-53545829 None:intergenic 50.0%
!!! GGGTTTTGAGTTGGTGAACC+TGG - chr8_4:53545821-53545840 None:intergenic 50.0%
CTCAAAACCCTGATTCACCC+AGG + chr8_4:53545831-53545850 Msa1333420:CDS 50.0%
!! AGCATGGTGTCGTCGACTTT+GGG - chr8_4:53545906-53545925 None:intergenic 50.0%
!! TAGCATGGTGTCGTCGACTT+TGG - chr8_4:53545907-53545926 None:intergenic 50.0%
! GGCTACAGTTAGGGTTAGCA+TGG - chr8_4:53545922-53545941 None:intergenic 50.0%
!!! TTTTGGGGCGGCTACAGTTA+GGG - chr8_4:53545931-53545950 None:intergenic 50.0%
!!! GTTTAGAGAGGGTTTTGGGG+CGG - chr8_4:53545943-53545962 None:intergenic 50.0%
! TGGGTCGATGGGTTTAGAGA+GGG - chr8_4:53545954-53545973 None:intergenic 50.0%
! TTGGGTCGATGGGTTTAGAG+AGG - chr8_4:53545955-53545974 None:intergenic 50.0%
!! AGGTGTTGAGTTGGGTCGAT+GGG - chr8_4:53545965-53545984 None:intergenic 50.0%
!! AAGGTGTTGAGTTGGGTCGA+TGG - chr8_4:53545966-53545985 None:intergenic 50.0%
!! AGGCGACAAGGTGTTGAGTT+GGG - chr8_4:53545973-53545992 None:intergenic 50.0%
!! AAGGCGACAAGGTGTTGAGT+TGG - chr8_4:53545974-53545993 None:intergenic 50.0%
CAACCCTACCTATGACCAAC+TGG + chr8_4:53545994-53546013 Msa1333420:CDS 50.0%
GCTAAAGACGGTTTAGCCCA+AGG + chr8_4:53546045-53546064 Msa1333420:intron 50.0%
TCTTCTTCTGTTCGCGGTGT+GGG - chr8_4:53546243-53546262 None:intergenic 50.0%
AATAACCACGCCTCAGAAGC+TGG - chr8_4:53546351-53546370 None:intergenic 50.0%
GGTCATTTGATTCTCTCGGC+TGG + chr8_4:53546692-53546711 Msa1333420:CDS 50.0%
CTCGGCTGGTATGGATACTA+AGG + chr8_4:53546706-53546725 Msa1333420:CDS 50.0%
TGTGAAGCTTAACCCGGATG+AGG + chr8_4:53546925-53546944 Msa1333420:CDS 50.0%
CTAGTGATGACAAGTCCCTC+AGG + chr8_4:53547097-53547116 Msa1333420:CDS 50.0%
ATGACAAGTCCCTCAGGGTA+TGG + chr8_4:53547103-53547122 Msa1333420:CDS 50.0%
TGACAAGTCCCTCAGGGTAT+GGG + chr8_4:53547104-53547123 Msa1333420:CDS 50.0%
ACCATACTCCCATACCCTGA+GGG - chr8_4:53547115-53547134 None:intergenic 50.0%
TACCATACTCCCATACCCTG+AGG - chr8_4:53547116-53547135 None:intergenic 50.0%
! ATGGGAGTATGGTATTCCCG+TGG + chr8_4:53547122-53547141 Msa1333420:CDS 50.0%
CGTCTGTACCGTCTCCAACA+CGG - chr8_4:53544929-53544948 None:intergenic 55.0%
GTGGAGTCCTGGGTGAATCA+GGG - chr8_4:53545841-53545860 None:intergenic 55.0%
!! CATGGTGTCGTCGACTTTGG+GGG - chr8_4:53545904-53545923 None:intergenic 55.0%
!! GCATGGTGTCGTCGACTTTG+GGG - chr8_4:53545905-53545924 None:intergenic 55.0%
!!! GTTTTGGGGCGGCTACAGTT+AGG - chr8_4:53545932-53545951 None:intergenic 55.0%
AGGTAGGGTTGAAGGCGACA+AGG - chr8_4:53545985-53546004 None:intergenic 55.0%
GGCCCAGTTGGTCATAGGTA+GGG - chr8_4:53546000-53546019 None:intergenic 55.0%
CTCTTCTTCTGTTCGCGGTG+TGG - chr8_4:53546244-53546263 None:intergenic 55.0%
CACACCGCGAACAGAAGAAG+AGG + chr8_4:53546242-53546261 Msa1333420:CDS 55.0%
!! AGAATCCAGCTTCTGAGGCG+TGG + chr8_4:53546343-53546362 Msa1333420:CDS 55.0%
! GAGGAGCACGCCAAGAAGAA+AGG + chr8_4:53546450-53546469 Msa1333420:CDS 55.0%
CTCGCCTTAGCATCTTTCGG+AGG - chr8_4:53546581-53546600 None:intergenic 55.0%
TTGGGATACCGAAACAGGGC+AGG + chr8_4:53546865-53546884 Msa1333420:CDS 55.0%
TCCCTCAGGGTATGGGAGTA+TGG + chr8_4:53547111-53547130 Msa1333420:CDS 55.0%
CGTCTGTACCGTCTCCAACA+CGG - chr8_4:53544929-53544948 None:intergenic 55.0%
GTGGAGTCCTGGGTGAATCA+GGG - chr8_4:53545841-53545860 None:intergenic 55.0%
!! CATGGTGTCGTCGACTTTGG+GGG - chr8_4:53545904-53545923 None:intergenic 55.0%
!! GCATGGTGTCGTCGACTTTG+GGG - chr8_4:53545905-53545924 None:intergenic 55.0%
!!! GTTTTGGGGCGGCTACAGTT+AGG - chr8_4:53545932-53545951 None:intergenic 55.0%
AGGTAGGGTTGAAGGCGACA+AGG - chr8_4:53545985-53546004 None:intergenic 55.0%
GGCCCAGTTGGTCATAGGTA+GGG - chr8_4:53546000-53546019 None:intergenic 55.0%
CTCTTCTTCTGTTCGCGGTG+TGG - chr8_4:53546244-53546263 None:intergenic 55.0%
CACACCGCGAACAGAAGAAG+AGG + chr8_4:53546242-53546261 Msa1333420:CDS 55.0%
!! AGAATCCAGCTTCTGAGGCG+TGG + chr8_4:53546343-53546362 Msa1333420:CDS 55.0%
! GAGGAGCACGCCAAGAAGAA+AGG + chr8_4:53546450-53546469 Msa1333420:CDS 55.0%
CTCGCCTTAGCATCTTTCGG+AGG - chr8_4:53546581-53546600 None:intergenic 55.0%
TTGGGATACCGAAACAGGGC+AGG + chr8_4:53546865-53546884 Msa1333420:CDS 55.0%
TCCCTCAGGGTATGGGAGTA+TGG + chr8_4:53547111-53547130 Msa1333420:CDS 55.0%
CTGTACCGTCTCCAACACGG+AGG - chr8_4:53544926-53544945 None:intergenic 60.0%
GGTGGAGTCCTGGGTGAATC+AGG - chr8_4:53545842-53545861 None:intergenic 60.0%
!! GGTTGGTTCGGTGGAGTCCT+GGG - chr8_4:53545851-53545870 None:intergenic 60.0%
GGGCCCAGTTGGTCATAGGT+AGG - chr8_4:53546001-53546020 None:intergenic 60.0%
AAGGGTGAGAGGGCCTTGGA+GGG - chr8_4:53546023-53546042 None:intergenic 60.0%
TAAGGGTGAGAGGGCCTTGG+AGG - chr8_4:53546024-53546043 None:intergenic 60.0%
GCTTAAGGGTGAGAGGGCCT+TGG - chr8_4:53546027-53546046 None:intergenic 60.0%
! GAGTCCTTGGGCTGGGAAGA+AGG + chr8_4:53546383-53546402 Msa1333420:CDS 60.0%
CCTTCCTTCTTCCCAGCCCA+AGG - chr8_4:53546390-53546409 None:intergenic 60.0%
! CCTTGGGCTGGGAAGAAGGA+AGG + chr8_4:53546387-53546406 Msa1333420:CDS 60.0%
CGCGCCTCCGAAAGATGCTA+AGG + chr8_4:53546574-53546593 Msa1333420:CDS 60.0%
CTGTACCGTCTCCAACACGG+AGG - chr8_4:53544926-53544945 None:intergenic 60.0%
GGTGGAGTCCTGGGTGAATC+AGG - chr8_4:53545842-53545861 None:intergenic 60.0%
!! GGTTGGTTCGGTGGAGTCCT+GGG - chr8_4:53545851-53545870 None:intergenic 60.0%
GGGCCCAGTTGGTCATAGGT+AGG - chr8_4:53546001-53546020 None:intergenic 60.0%
AAGGGTGAGAGGGCCTTGGA+GGG - chr8_4:53546023-53546042 None:intergenic 60.0%
TAAGGGTGAGAGGGCCTTGG+AGG - chr8_4:53546024-53546043 None:intergenic 60.0%
GCTTAAGGGTGAGAGGGCCT+TGG - chr8_4:53546027-53546046 None:intergenic 60.0%
! GAGTCCTTGGGCTGGGAAGA+AGG + chr8_4:53546383-53546402 Msa1333420:CDS 60.0%
CCTTCCTTCTTCCCAGCCCA+AGG - chr8_4:53546390-53546409 None:intergenic 60.0%
! CCTTGGGCTGGGAAGAAGGA+AGG + chr8_4:53546387-53546406 Msa1333420:CDS 60.0%
CGCGCCTCCGAAAGATGCTA+AGG + chr8_4:53546574-53546593 Msa1333420:CDS 60.0%
!! GGGTTGGTTCGGTGGAGTCC+TGG - chr8_4:53545852-53545871 None:intergenic 65.0%
AGAACGGGAAGGAGAGGGGG+GGG - chr8_4:53545877-53545896 None:intergenic 65.0%
CAGAACGGGAAGGAGAGGGG+GGG - chr8_4:53545878-53545897 None:intergenic 65.0%
GCAGAACGGGAAGGAGAGGG+GGG - chr8_4:53545879-53545898 None:intergenic 65.0%
GGCAGAACGGGAAGGAGAGG+GGG - chr8_4:53545880-53545899 None:intergenic 65.0%
CGGCAGAACGGGAAGGAGAG+GGG - chr8_4:53545881-53545900 None:intergenic 65.0%
GCGGCAGAACGGGAAGGAGA+GGG - chr8_4:53545882-53545901 None:intergenic 65.0%
! GACTTTGGGGGCGGCAGAAC+GGG - chr8_4:53545892-53545911 None:intergenic 65.0%
! CGACTTTGGGGGCGGCAGAA+CGG - chr8_4:53545893-53545912 None:intergenic 65.0%
!! GGTGTCGTCGACTTTGGGGG+CGG - chr8_4:53545901-53545920 None:intergenic 65.0%
GAGGGGGCCCAGTTGGTCAT+AGG - chr8_4:53546005-53546024 None:intergenic 65.0%
AGGGTGAGAGGGCCTTGGAG+GGG - chr8_4:53546022-53546041 None:intergenic 65.0%
!! GGGTTGGTTCGGTGGAGTCC+TGG - chr8_4:53545852-53545871 None:intergenic 65.0%
AGAACGGGAAGGAGAGGGGG+GGG - chr8_4:53545877-53545896 None:intergenic 65.0%
CAGAACGGGAAGGAGAGGGG+GGG - chr8_4:53545878-53545897 None:intergenic 65.0%
GCAGAACGGGAAGGAGAGGG+GGG - chr8_4:53545879-53545898 None:intergenic 65.0%
GGCAGAACGGGAAGGAGAGG+GGG - chr8_4:53545880-53545899 None:intergenic 65.0%
CGGCAGAACGGGAAGGAGAG+GGG - chr8_4:53545881-53545900 None:intergenic 65.0%
GCGGCAGAACGGGAAGGAGA+GGG - chr8_4:53545882-53545901 None:intergenic 65.0%
! GACTTTGGGGGCGGCAGAAC+GGG - chr8_4:53545892-53545911 None:intergenic 65.0%
! CGACTTTGGGGGCGGCAGAA+CGG - chr8_4:53545893-53545912 None:intergenic 65.0%
!! GGTGTCGTCGACTTTGGGGG+CGG - chr8_4:53545901-53545920 None:intergenic 65.0%
GAGGGGGCCCAGTTGGTCAT+AGG - chr8_4:53546005-53546024 None:intergenic 65.0%
AGGGTGAGAGGGCCTTGGAG+GGG - chr8_4:53546022-53546041 None:intergenic 65.0%
!! AGGGGGGGGGTGGGTTGGTT+CGG - chr8_4:53545863-53545882 None:intergenic 70.0%
GAACGGGAAGGAGAGGGGGG+GGG - chr8_4:53545876-53545895 None:intergenic 70.0%
GGCGGCAGAACGGGAAGGAG+AGG - chr8_4:53545883-53545902 None:intergenic 70.0%
TTGGGGGCGGCAGAACGGGA+AGG - chr8_4:53545888-53545907 None:intergenic 70.0%
GACCAACTGGGCCCCCTCCA+AGG + chr8_4:53546007-53546026 Msa1333420:CDS 70.0%
GGGTGAGAGGGCCTTGGAGG+GGG - chr8_4:53546021-53546040 None:intergenic 70.0%
!! AGGGGGGGGGTGGGTTGGTT+CGG - chr8_4:53545863-53545882 None:intergenic 70.0%
GAACGGGAAGGAGAGGGGGG+GGG - chr8_4:53545876-53545895 None:intergenic 70.0%
GGCGGCAGAACGGGAAGGAG+AGG - chr8_4:53545883-53545902 None:intergenic 70.0%
TTGGGGGCGGCAGAACGGGA+AGG - chr8_4:53545888-53545907 None:intergenic 70.0%
GACCAACTGGGCCCCCTCCA+AGG + chr8_4:53546007-53546026 Msa1333420:CDS 70.0%
GGGTGAGAGGGCCTTGGAGG+GGG - chr8_4:53546021-53546040 None:intergenic 70.0%
!! GGGGGGGTGGGTTGGTTCGG+TGG - chr8_4:53545860-53545879 None:intergenic 75.0%
AGGAGAGGGGGGGGGTGGGT+TGG - chr8_4:53545868-53545887 None:intergenic 75.0%
GGGAAGGAGAGGGGGGGGGT+GGG - chr8_4:53545872-53545891 None:intergenic 75.0%
GGCCTTGGAGGGGGCCCAGT+TGG - chr8_4:53546012-53546031 None:intergenic 75.0%
!! GGGGGGGTGGGTTGGTTCGG+TGG - chr8_4:53545860-53545879 None:intergenic 75.0%
AGGAGAGGGGGGGGGTGGGT+TGG - chr8_4:53545868-53545887 None:intergenic 75.0%
GGGAAGGAGAGGGGGGGGGT+GGG - chr8_4:53545872-53545891 None:intergenic 75.0%
GGCCTTGGAGGGGGCCCAGT+TGG - chr8_4:53546012-53546031 None:intergenic 75.0%
! CGGGAAGGAGAGGGGGGGGG+TGG - chr8_4:53545873-53545892 None:intergenic 80.0%
! CGGGAAGGAGAGGGGGGGGG+TGG - chr8_4:53545873-53545892 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53544728 53547150 53544728 ID=Msa1333420;Name=Msa1333420
chr8_4 mRNA 53544728 53547150 53544728 ID=Msa1333420-mRNA-1;Parent=Msa1333420;Name=Msa1333420-mRNA-1;_AED=0.15;_eAED=0.16;_QI=115|0|0.2|1|0.25|0.2|5|0|426
chr8_4 exon 53544728 53544972 53544728 ID=Msa1333420-mRNA-1:exon:16447;Parent=Msa1333420-mRNA-1
chr8_4 exon 53545822 53546054 53545822 ID=Msa1333420-mRNA-1:exon:16448;Parent=Msa1333420-mRNA-1
chr8_4 exon 53546211 53546330 53546211 ID=Msa1333420-mRNA-1:exon:16449;Parent=Msa1333420-mRNA-1
chr8_4 exon 53546339 53546494 53546339 ID=Msa1333420-mRNA-1:exon:16450;Parent=Msa1333420-mRNA-1
chr8_4 exon 53546509 53547150 53546509 ID=Msa1333420-mRNA-1:exon:16451;Parent=Msa1333420-mRNA-1
chr8_4 five_prime_UTR 53544728 53544842 53544728 ID=Msa1333420-mRNA-1:five_prime_utr;Parent=Msa1333420-mRNA-1
chr8_4 CDS 53544843 53544972 53544843 ID=Msa1333420-mRNA-1:cds;Parent=Msa1333420-mRNA-1
chr8_4 CDS 53545822 53546054 53545822 ID=Msa1333420-mRNA-1:cds;Parent=Msa1333420-mRNA-1
chr8_4 CDS 53546211 53546330 53546211 ID=Msa1333420-mRNA-1:cds;Parent=Msa1333420-mRNA-1
chr8_4 CDS 53546339 53546494 53546339 ID=Msa1333420-mRNA-1:cds;Parent=Msa1333420-mRNA-1
chr8_4 CDS 53546509 53547150 53546509 ID=Msa1333420-mRNA-1:cds;Parent=Msa1333420-mRNA-1
Gene Sequence

>Msa1333420

ATGAACCCTAATTTTCAATTTATTGCCCAAATTCAGAATTCCCTCAATCCACATCAAACCCAATCGGTCGATTCTAAAAACCTCCGTGTTGGAGACGGTACAGACGCCGTGTTCATCTTTAGCTTCAAGGGTTCACCAACTCAAAACCCTGATTCACCCAGGACTCCACCGAACCAACCCACCCCCCCCCTCTCCTTCCCGTTCTGCCGCCCCCAAAGTCGACGACACCATGCTAACCCTAACTGTAGCCGCCCCAAAACCCTCTCTAAACCCATCGACCCAACTCAACACCTTGTCGCCTTCAACCCTACCTATGACCAACTGGGCCCCCTCCAAGGCCCTCTCACCCTTAAGCTAAAGACGAAGAATAACGCTGCTTCTGTTTACAATATCCCACACCGCGAACAGAAGAAGAGGAAAATTGAATCCCTTAAGAAGAAAGAAGAGAATGATGATGAAGACGACGAAAATAACGACGAGAGGATTGAGAATCCAGCTTCTGAGGCGTGGTTATTGAAGAATAAGAAGAGTCCTTGGGCTGGGAAGAAGGAAGGTTTACAAGGAGAGTTAACGGAAGATCAGAAGAAATACGCTGAGGAGCACGCCAAGAAGAAAGGCGAAGAAAAAGTGGTTTTGGTGGCTGTTAAGGATAAGAGTACTTTTCATGGGAAAGAGGAAAGGGATTATCAAGGTAGGTCTTGGATCGCGCCTCCGAAAGATGCTAAGGCGAGTAATGATCATTGTTTTATACCAAAGAGATTGGTGCATACTTGGAGCGGACATACAAAAGGGGTTTCTGCGATTAGGTTTTTTCCGAATTCGGGTCATTTGATTCTCTCGGCTGGTATGGATACTAAGGTTAAGATTTGGGATGTTTTCAACACTGGTAAATGTATGAGGACTTACATGGGTCATTCCAAAGCTGTTAGGGATATTTGTTTTACTAATGATGGAACAAAGTTTTTGAGTGCTGGTTATGATAAGAATATTAAGTATTGGGATACCGAAACAGGGCAGGTTATATCGACGTTCTCCACTGGGAAGATCCCTTATGTTGTGAAGCTTAACCCGGATGAGGATAAACAGAATGTTTTGTTGGCTGGTATGAGTGATAAGAAGATTGTTCAGTGGGATATGAATACAGGGCAGATAACTCAAGAGTATGATCAGCATTTGGGGCTGTCAATACCATTACTTTTGTTGATAACAACAGGAGATTTGTTACTTCTAGTGATGACAAGTCCCTCAGGGTATGGGAGTATGGTATTCCCGTGGTTATAA

Protein sequence

>Msa1333420

MNPNFQFIAQIQNSLNPHQTQSVDSKNLRVGDGTDAVFIFSFKGSPTQNPDSPRTPPNQPTPPLSFPFCRPQSRRHHANPNCSRPKTLSKPIDPTQHLVAFNPTYDQLGPLQGPLTLKLKTKNNAASVYNIPHREQKKRKIESLKKKEENDDEDDENNDERIENPASEAWLLKNKKSPWAGKKEGLQGELTEDQKKYAEEHAKKKGEEKVVLVAVKDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCFIPKRLVHTWSGHTKGVSAIRFFPNSGHLILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHLGLSIPLLLLITTGDLLLLVMTSPSGYGSMVFPWL*