AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1014530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1014530 MtrunA17_Chr7g0226991 91.495 388 33 0 255 642 21 408 0.0 761
Msa1014530 MtrunA17_Chr8g0391481 77.049 366 84 0 277 642 13 378 0.0 617
Msa1014530 MtrunA17_Chr3g0140371 72.022 361 98 3 282 642 9 366 0.0 551
Msa1014530 MtrunA17_Chr5g0414051 65.405 370 124 3 270 638 56 422 3.07e-175 505
Msa1014530 MtrunA17_Chr5g0414091 64.804 358 113 5 288 638 82 433 2.61e-167 485
Msa1014530 MtrunA17_Chr5g0414061 58.449 361 141 5 282 638 85 440 6.74e-151 443
Msa1014530 MtrunA17_Chr5g0414041 59.270 356 138 4 290 641 86 438 8.30e-150 441
Msa1014530 MtrunA17_Chr5g0414081 81.000 200 38 0 439 638 2 201 4.39e-118 350
Msa1014530 MtrunA17_Chr6g0456691 42.135 356 188 9 289 637 76 420 4.31e-100 312
Msa1014530 MtrunA17_Chr8g0347321 39.266 354 202 6 289 636 93 439 7.47e-91 288
Msa1014530 MtrunA17_Chr8g0387921 40.282 355 200 7 291 639 74 422 9.68e-91 288
Msa1014530 MtrunA17_Chr6g0456681 40.503 358 194 8 289 637 62 409 1.42e-84 271
Msa1014530 MtrunA17_Chr6g0451321 34.715 386 235 10 259 638 85 459 3.90e-74 246
Msa1014530 MtrunA17_Chr2g0283851 36.119 371 204 13 285 638 48 402 1.71e-73 242
Msa1014530 MtrunA17_Chr1g0188191 35.646 418 235 14 246 638 175 583 1.62e-70 239
Msa1014530 MtrunA17_Chr6g0476041 34.959 369 208 12 287 638 163 516 1.48e-63 219
Msa1014530 MtrunA17_Chr7g0259711 33.867 375 198 15 291 642 91 438 1.73e-53 189
Msa1014530 MtrunA17_Chr7g0221281 37.247 247 139 8 396 637 2 237 2.00e-52 181
Msa1014530 MtrunA17_Chr5g0413271 28.442 443 274 13 209 640 71 481 3.72e-45 167
Msa1014530 MtrunA17_Chr1g0175671 30.732 410 240 15 250 638 126 512 1.18e-44 167
Msa1014530 MtrunA17_Chr2g0287901 32.075 371 203 13 290 638 96 439 7.94e-44 163
Msa1014530 MtrunA17_Chr8g0384151 29.504 383 223 12 268 636 67 416 1.05e-43 162
Msa1014530 MtrunA17_Chr7g0258851 31.421 366 210 14 291 638 248 590 3.75e-42 161
Msa1014530 MtrunA17_Chr4g0071391 29.639 388 232 14 266 636 83 446 4.22e-42 158
Msa1014530 MtrunA17_Chr8g0368461 28.866 388 214 12 287 640 174 533 1.02e-41 159
Msa1014530 MtrunA17_Chr5g0430371 27.887 355 232 8 288 632 55 395 3.58e-40 151
Msa1014530 MtrunA17_Chr1g0213281 30.423 378 214 14 287 640 171 523 1.52e-39 152
Msa1014530 MtrunA17_Chr7g0221271 39.444 180 92 2 238 415 41 205 5.50e-39 142
Msa1014530 MtrunA17_Chr7g0269991 27.335 439 257 14 226 633 57 464 4.27e-38 147
Msa1014530 MtrunA17_Chr4g0005491 30.628 382 230 15 268 632 40 403 6.96e-38 145
Msa1014530 MtrunA17_Chr8g0360521 29.380 371 223 14 284 638 64 411 1.96e-37 144
Msa1014530 MtrunA17_Chr3g0105301 28.693 352 225 9 288 632 40 372 2.72e-37 143
Msa1014530 MtrunA17_Chr8g0384421 26.963 382 231 11 276 636 118 472 4.07e-37 144
Msa1014530 MtrunA17_Chr4g0068111 27.358 424 273 12 228 636 50 453 1.24e-36 143
Msa1014530 MtrunA17_Chr3g0113671 28.729 362 222 12 288 632 103 445 3.46e-35 138
Msa1014530 MtrunA17_Chr7g0242701 29.736 417 238 17 245 636 41 427 3.59e-35 138
Msa1014530 MtrunA17_Chr3g0126021 28.610 374 198 14 290 636 128 459 4.63e-35 138
Msa1014530 MtrunA17_Chr3g0085081 29.248 359 196 10 289 632 29 344 1.28e-34 134
Msa1014530 MtrunA17_Chr1g0171171 27.762 353 222 10 289 636 51 375 1.69e-34 135
Msa1014530 MtrunA17_Chr4g0006991 28.219 365 220 14 291 636 86 427 2.86e-34 135
Msa1014530 MtrunA17_Chr4g0070341 25.000 376 220 8 289 636 130 471 4.79e-34 135
Msa1014530 MtrunA17_Chr7g0243301 30.000 360 216 14 291 632 64 405 2.38e-33 132
Msa1014530 MtrunA17_Chr3g0091031 28.969 359 197 10 289 632 29 344 4.02e-33 130
Msa1014530 MtrunA17_Chr3g0085071 28.775 351 204 13 291 632 46 359 4.10e-33 130
Msa1014530 MtrunA17_Chr1g0210771 27.401 354 215 12 289 632 57 378 8.84e-31 124
Msa1014530 MtrunA17_Chr7g0221291 43.220 118 67 0 263 380 51 168 5.44e-30 116
Msa1014530 MtrunA17_Chr2g0314801 29.086 361 207 15 288 636 30 353 1.34e-29 120
Msa1014530 MtrunA17_Chr6g0455901 28.954 373 213 17 290 636 70 416 1.79e-29 121
Msa1014530 MtrunA17_Chr4g0049421 29.843 382 201 15 291 639 48 395 1.80e-29 121
Msa1014530 MtrunA17_Chr3g0114101 27.978 361 226 11 291 636 89 430 6.24e-29 120
Msa1014530 MtrunA17_Chr5g0437601 27.174 368 226 15 288 636 80 424 2.72e-28 118
Msa1014530 MtrunA17_Chr3g0097891 27.920 351 209 11 291 632 31 346 3.39e-28 116
Msa1014530 MtrunA17_Chr2g0283581 27.019 359 223 11 283 636 34 358 6.41e-28 115
Msa1014530 MtrunA17_Chr4g0041011 27.487 382 226 15 267 636 21 363 7.88e-28 115
Msa1014530 MtrunA17_Chr5g0413851 28.933 356 201 14 289 632 40 355 1.28e-27 114
Msa1014530 MtrunA17_Chr4g0005481 28.150 373 211 15 289 636 106 446 1.47e-27 116
Msa1014530 MtrunA17_Chr4g0045941 28.205 351 206 13 291 632 33 346 1.73e-27 114
Msa1014530 MtrunA17_Chr4g0045951 28.412 359 221 12 278 632 32 358 1.78e-27 114
Msa1014530 MtrunA17_Chr2g0314791 27.548 363 208 13 287 636 25 345 4.61e-27 112
Msa1014530 MtrunA17_Chr2g0325481 27.248 367 202 15 284 632 43 362 9.23e-27 112
Msa1014530 MtrunA17_Chr5g0437291 26.486 370 221 15 289 632 163 507 1.70e-26 114
Msa1014530 MtrunA17_Chr7g0227021 75.806 62 15 0 29 90 61 122 1.14e-22 94.0
Msa1014530 MtrunA17_Chr7g0227021 74.545 55 14 0 56 110 61 115 1.73e-18 82.0
Msa1014530 MtrunA17_Chr7g0227021 57.317 82 16 2 201 282 53 115 1.43e-16 76.3
Msa1014530 MtrunA17_Chr7g0227021 57.746 71 14 1 126 196 61 115 3.63e-15 72.4
Msa1014530 MtrunA17_Chr7g0227021 57.971 69 13 1 83 151 61 113 1.44e-14 70.5
Msa1014530 MtrunA17_Chr7g0227021 57.746 71 14 1 169 239 61 115 2.12e-14 70.1
Msa1014530 MtrunA17_Chr1g0209921 45.833 96 50 2 289 382 42 137 2.72e-18 85.5
Msa1014530 MtrunA17_Chr1g0178081 44.118 102 52 3 282 380 47 146 9.45e-17 82.4
Msa1014530 MtrunA17_Chr7g0275501 55.738 61 24 1 575 635 11 68 1.69e-16 74.3
Msa1014530 MtrunA17_Chr4g0057171 38.776 98 51 4 430 527 1 89 2.12e-14 70.1
Msa1014530 MtrunA17_Chr2g0287911 46.429 56 23 1 291 346 61 109 5.62e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1014530 AT1G70230.1 49.020 357 161 8 288 640 76 415 1.59e-120 365
Msa1014530 AT1G01430.1 40.282 355 197 9 291 636 99 447 8.65e-91 289
Msa1014530 AT3G02440.1 41.076 353 192 10 291 637 127 469 1.33e-88 284
Msa1014530 AT3G02440.2 41.076 353 192 10 291 637 135 477 1.85e-88 284
Msa1014530 AT5G15890.1 43.258 356 180 12 288 637 184 523 1.92e-88 285
Msa1014530 AT4G01080.1 39.943 348 195 8 291 634 91 428 3.44e-87 279
Msa1014530 AT4G23790.1 39.276 359 205 8 289 639 77 430 6.38e-87 278
Msa1014530 AT4G11090.1 38.083 386 223 9 265 640 50 429 1.29e-85 275
Msa1014530 AT5G15900.1 38.292 363 199 10 290 641 66 414 2.62e-83 268
Msa1014530 AT5G15900.2 38.292 363 199 10 290 641 85 433 5.17e-83 268
Msa1014530 AT3G28150.1 38.056 360 202 10 287 638 66 412 2.94e-78 255
Msa1014530 AT4G25360.1 35.369 393 216 13 269 640 153 528 1.28e-67 230
Msa1014530 AT4G25360.2 35.369 393 216 13 269 640 153 528 1.28e-67 230
Msa1014530 AT5G51640.1 34.761 397 218 12 265 638 112 490 2.48e-65 223
Msa1014530 AT5G19160.1 31.720 372 214 11 291 642 99 450 2.15e-48 176
Msa1014530 AT1G48880.1 32.698 367 194 14 288 638 112 441 1.55e-46 171
Msa1014530 AT3G06080.2 30.831 373 205 12 291 638 103 447 3.92e-43 162
Msa1014530 AT3G12060.1 32.703 370 191 13 289 632 194 531 6.93e-43 163
Msa1014530 AT5G06700.1 30.831 373 207 14 289 638 253 597 3.57e-42 162
Msa1014530 AT2G30010.1 30.053 376 235 11 274 636 36 396 7.65e-42 156
Msa1014530 AT5G64020.1 28.649 370 222 11 291 636 57 408 1.20e-41 156
Msa1014530 AT2G30010.2 30.053 376 235 11 274 636 79 439 1.30e-41 157
Msa1014530 AT5G58600.1 30.312 353 227 8 288 636 63 400 1.61e-40 153
Msa1014530 AT1G60790.1 28.804 368 222 12 291 639 190 536 5.21e-40 154
Msa1014530 AT5G06230.2 29.839 372 215 13 287 636 17 364 2.14e-39 149
Msa1014530 AT1G73140.1 28.989 376 229 14 283 642 59 412 2.43e-39 150
Msa1014530 AT3G11570.1 31.343 402 230 14 255 636 44 419 9.71e-39 148
Msa1014530 AT5G06230.1 29.839 372 215 13 287 636 58 405 1.00e-38 148
Msa1014530 AT5G20680.6 25.000 444 249 13 238 636 53 457 1.81e-38 148
Msa1014530 AT5G20590.1 30.707 368 208 16 289 636 139 479 1.03e-37 147
Msa1014530 AT2G14530.1 29.243 383 206 14 286 636 57 406 1.07e-37 145
Msa1014530 AT5G20680.2 25.000 444 249 13 238 636 129 533 1.40e-37 147
Msa1014530 AT5G20680.4 25.000 444 249 13 238 636 147 551 1.71e-37 147
Msa1014530 AT5G20680.1 25.000 444 249 13 238 636 147 551 1.71e-37 147
Msa1014530 AT5G20680.3 25.000 444 249 13 238 636 147 551 1.71e-37 147
Msa1014530 AT5G20680.5 25.000 444 249 13 238 636 147 551 1.71e-37 147
Msa1014530 AT2G40160.1 28.382 377 231 13 277 632 61 419 2.04e-36 142
Msa1014530 AT2G40160.2 28.382 377 231 13 277 632 61 419 2.21e-36 142
Msa1014530 AT2G40150.1 28.351 388 233 16 271 632 48 416 1.67e-35 139
Msa1014530 AT3G62390.1 28.912 377 222 14 279 638 127 474 1.93e-35 140
Msa1014530 AT3G11030.1 31.351 370 203 16 291 636 106 448 9.06e-35 137
Msa1014530 AT5G49340.1 28.375 363 224 13 290 636 99 441 9.19e-35 137
Msa1014530 AT2G37720.1 26.842 380 232 11 277 636 129 482 1.50e-34 137
Msa1014530 AT2G38320.1 30.556 360 218 15 289 632 57 400 1.82e-34 136
Msa1014530 AT3G55990.1 28.061 392 245 16 258 632 108 479 9.35e-34 135
Msa1014530 AT5G19160.2 34.118 255 133 8 291 527 99 336 2.14e-32 129
Msa1014530 AT3G14850.2 30.312 353 207 10 291 636 34 354 2.19e-32 129
Msa1014530 AT5G01360.2 27.298 359 226 13 291 633 36 375 3.41e-32 129
Msa1014530 AT2G40320.1 28.689 366 223 14 288 636 78 422 1.07e-31 128
Msa1014530 AT2G30900.1 29.014 355 213 12 286 632 38 361 1.25e-31 127
Msa1014530 AT2G42570.1 28.329 353 211 9 291 636 47 364 1.32e-31 127
Msa1014530 AT5G01360.1 27.528 356 229 12 291 633 92 431 1.44e-31 128
Msa1014530 AT3G54260.1 26.997 363 201 14 291 632 51 370 3.83e-31 125
Msa1014530 AT2G38320.2 30.887 327 195 14 321 632 7 317 1.02e-29 120
Msa1014530 AT5G64470.3 27.717 368 216 16 291 636 55 394 2.24e-29 121
Msa1014530 AT5G64470.2 28.108 370 218 16 291 636 55 400 1.07e-28 119
Msa1014530 AT5G58600.2 31.950 241 147 6 288 525 63 289 2.76e-28 115
Msa1014530 AT5G01620.3 26.471 408 241 16 258 636 80 457 1.26e-27 117
Msa1014530 AT5G01620.2 27.649 387 218 16 274 636 101 449 1.27e-27 116
Msa1014530 AT5G01620.1 27.649 387 218 16 274 636 101 449 1.27e-27 116
Msa1014530 AT1G29050.1 24.682 393 241 12 260 636 25 378 3.37e-27 114
Msa1014530 AT2G34070.1 25.714 350 225 10 291 636 65 383 4.68e-27 114
Msa1014530 AT3G06080.1 31.496 254 141 9 291 527 103 340 7.09e-27 112
Msa1014530 AT2G40160.3 27.863 262 164 8 277 525 61 310 4.50e-25 106
Msa1014530 AT2G31110.2 26.087 345 221 10 291 632 45 358 9.84e-25 106
Msa1014530 AT3G62390.2 32.447 188 116 4 279 457 127 312 3.76e-24 105
Msa1014530 AT1G78710.1 27.606 355 212 14 291 636 38 356 6.45e-24 104
Msa1014530 AT5G20590.2 33.696 184 104 7 289 458 139 318 9.49e-24 103
Msa1014530 AT2G30900.2 35.028 177 105 4 286 458 38 208 1.80e-23 101
Msa1014530 AT5G06230.3 28.409 264 154 9 285 527 56 305 1.65e-22 99.0
Msa1014530 AT5G64470.1 26.761 284 174 11 291 555 55 323 4.12e-19 89.4
Msa1014530 AT5G64470.4 27.778 270 161 11 291 541 55 309 1.05e-18 88.2
Msa1014530 AT2G31110.3 32.544 169 106 4 291 457 45 207 2.65e-18 85.9
Msa1014530 AT1G78710.2 41.935 93 51 2 291 382 31 121 3.22e-15 77.4
Msa1014530 AT3G14850.1 26.897 290 159 11 361 636 1 251 3.45e-13 70.5

Find 156 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCTCAATTATGGTATTA+AGG 0.127171 7_1:+23549759 None:intergenic
TATGAGAATGATTCAGTTAT+AGG 0.145787 7_1:-23549863 Msa1014530:CDS
ATTTCATTGGTTATTGATTA+TGG 0.148135 7_1:+23549103 None:intergenic
TTCCAATGAGAAAGGCTTTA+AGG 0.178598 7_1:-23549787 Msa1014530:CDS
ATTATTAATGAAATATTAAT+TGG 0.191671 7_1:-23552379 Msa1014530:CDS
GATTTGTTGTATCACCTATT+TGG 0.201785 7_1:-23548755 Msa1014530:three_prime_UTR
GGTTCGAGCTTGTGGTTTAT+TGG 0.216940 7_1:-23548733 Msa1014530:three_prime_UTR
AAATCGAAATATAATGATAT+TGG 0.228288 7_1:-23549818 Msa1014530:CDS
GTTATTGATTATGGAGAAAA+TGG 0.236152 7_1:+23549112 None:intergenic
TTAATTTATAGATACTTTAT+AGG 0.242688 7_1:-23559346 Msa1014530:intron
GGTGCTTGATATAACAAAAT+TGG 0.266267 7_1:-23549519 Msa1014530:CDS
CAGTGGATAATAAGCAAATA+AGG 0.272702 7_1:+23550134 None:intergenic
ATTTGTTGTATCACCTATTT+GGG 0.282922 7_1:-23548754 Msa1014530:three_prime_UTR
ATTGAGAGGAAAATGGTTAA+AGG 0.284287 7_1:-23549746 Msa1014530:CDS
CCTCTCAATTATGGTATTAA+GGG 0.288512 7_1:+23549760 None:intergenic
TACCATAATTGAGAGGAAAA+TGG 0.294605 7_1:-23549753 Msa1014530:CDS
TTCTTCTCCTCATATCGATA+TGG 0.303142 7_1:+23549635 None:intergenic
CTCTACCAGTGGAAACTTTA+CGG 0.311011 7_1:-23555244 Msa1014530:CDS
CTCTACCGGTGGAAACTTTA+CGG 0.314138 7_1:-23552338 Msa1014530:CDS
CTCTACCGGTGGAAACTTTA+CGG 0.314138 7_1:-23553593 Msa1014530:CDS
CTCTACCGGTGGAAACTTTA+CGG 0.318546 7_1:-23556604 Msa1014530:CDS
AAGAGAGGCCCTTTGTATAA+TGG 0.328150 7_1:-23550352 Msa1014530:CDS
CCACAAGCTCGAACCCAAAT+AGG 0.336527 7_1:+23548741 None:intergenic
GTTCGAGCTTGTGGTTTATT+GGG 0.336797 7_1:-23548732 Msa1014530:three_prime_UTR
CGGACTCAAGCTACCTATAT+TGG 0.339810 7_1:-23550276 Msa1014530:CDS
GATCCAAATGTATTGTATTA+TGG 0.346737 7_1:+23549978 None:intergenic
TTTGAAGGTGCTTGGGATAA+GGG 0.348514 7_1:-23549680 Msa1014530:CDS
ATGCAAACTTGACATCCTAT+TGG 0.351005 7_1:-23550048 Msa1014530:CDS
GGAAGCTAAGATAAGAAGTA+TGG 0.354835 7_1:-23549600 Msa1014530:CDS
ATCCTTAAAGCCTTTCTCAT+TGG 0.367454 7_1:+23549785 None:intergenic
CCTATATGATTGATATATAT+AGG 0.370282 7_1:+23550103 None:intergenic
TTATGTTGTCATTTGGTCAT+TGG 0.375595 7_1:-23549910 Msa1014530:CDS
ACTGGAAGATCACACTCATT+TGG 0.381001 7_1:+23550244 None:intergenic
ACATATACATAGATCCTCTT+TGG 0.382582 7_1:+23559720 None:intergenic
AGCTTGTGGTTTATTGGGTC+AGG 0.384584 7_1:-23548727 Msa1014530:three_prime_UTR
ACACCATAATACAATACATT+TGG 0.387084 7_1:-23549981 Msa1014530:CDS
CACAAGAAACGGTGCCCAAT+AGG 0.390878 7_1:+23550033 None:intergenic
GATAAGAAGTATGGAAATAG+AGG 0.401481 7_1:-23549591 Msa1014530:CDS
ATGGTCATGCAGGAGCTTAT+AGG 0.404434 7_1:-23549481 Msa1014530:CDS
GATGGGCATCAAACCTCCTT+TGG 0.405616 7_1:-23554553 Msa1014530:CDS
AGAGAGGCCCTTTGTATAAT+GGG 0.406143 7_1:-23550351 Msa1014530:CDS
CCTATATATATCAATCATAT+AGG 0.409590 7_1:-23550103 Msa1014530:CDS
ATTATTAATGAAATATTGAA+TGG 0.411626 7_1:-23553634 Msa1014530:CDS
ATTATTAATGAAATATTGAA+TGG 0.411626 7_1:-23555285 Msa1014530:CDS
ATTATTAATGAAATATTGAA+TGG 0.411626 7_1:-23556645 Msa1014530:CDS
GGCAAGTCATATAGATCAAA+TGG 0.424659 7_1:-23549939 Msa1014530:CDS
TTGAGAGGAAAATGGTTAAA+GGG 0.425058 7_1:-23549745 Msa1014530:CDS
GACTTGATTATGTTGTCATT+TGG 0.425500 7_1:-23549917 Msa1014530:CDS
TGCAAACTTGACATCCTATT+GGG 0.427990 7_1:-23550047 Msa1014530:CDS
TAAGCTCCTGCATGACCATC+TGG 0.436152 7_1:+23549485 None:intergenic
TGCCAGGACCTATTGATACT+TGG 0.439130 7_1:-23549394 Msa1014530:CDS
TTTCGTGAAGTTTCCTCCAA+TGG 0.440980 7_1:+23552884 None:intergenic
ATGAGTTTAAGAAAAGTGTT+TGG 0.443851 7_1:+23550214 None:intergenic
CGTGAAGTTTCCACCGGAGG+TGG 0.444506 7_1:+23550658 None:intergenic
GGACAACATGTAATGAGATC+AGG 0.445192 7_1:-23550330 Msa1014530:CDS
GATGAGCGTCAGACCTCCTT+TGG 0.447497 7_1:-23555917 Msa1014530:CDS
TTGGTTTCCATCTCCAATAT+AGG 0.447965 7_1:+23550263 None:intergenic
TGTACCCATTGGTGCTTGCC+AGG 0.448190 7_1:-23549410 Msa1014530:CDS
TTCCTCCGTCCTAAAATGTA+AGG 0.450474 7_1:-23549303 Msa1014530:three_prime_UTR
CGTAAAGTTTCCACTGGTAG+AGG 0.452636 7_1:+23555245 None:intergenic
ACAAATTGGATTAAATTTGA+AGG 0.455918 7_1:-23549540 Msa1014530:CDS
AGCAAATAAGGGACTCTAGT+TGG 0.456340 7_1:+23550146 None:intergenic
CGTAAAGTTTCCACCGGTAG+AGG 0.461897 7_1:+23552339 None:intergenic
CGTAAAGTTTCCACCGGTAG+AGG 0.461897 7_1:+23553594 None:intergenic
TGCTTACAATTTGGAACAGA+AGG 0.463926 7_1:-23548971 Msa1014530:three_prime_UTR
CTCTTTCGTGAAGTTTCCAC+CGG 0.464812 7_1:+23550652 None:intergenic
CTCTTCCGTAAAGTTTCCAC+TGG 0.464929 7_1:+23555239 None:intergenic
CTCTTTGGTGAAGTTTCCAT+CGG 0.467099 7_1:+23559735 None:intergenic
TTGGGCACCGTTTCTTGTGA+AGG 0.470196 7_1:-23550029 Msa1014530:CDS
TGATCACCCTTCACAAGAAA+CGG 0.473787 7_1:+23550022 None:intergenic
ATCTCATTCCAAGTATCAAT+AGG 0.475718 7_1:+23549386 None:intergenic
AGTGGATAATAAGCAAATAA+GGG 0.476978 7_1:+23550135 None:intergenic
TCTTTGAAATATAAGGTTCA+CGG 0.478182 7_1:+23549064 None:intergenic
CCTATTTGGGTTCGAGCTTG+TGG 0.480025 7_1:-23548741 Msa1014530:three_prime_UTR
GATGGGCATCATACCTCCTC+TGG 0.480394 7_1:-23559193 Msa1014530:CDS
ATCAATCATATAGGCTCTGA+TGG 0.483349 7_1:-23550094 Msa1014530:CDS
GGAGAAGAAACTTGAAGGAA+TGG 0.484724 7_1:-23549621 Msa1014530:CDS
CGTAAAGTTTCCACCGGTAG+AGG 0.485524 7_1:+23556605 None:intergenic
AAGTCACATGATTTCTCAAG+AGG 0.488618 7_1:+23550400 None:intergenic
TAGGTCCTGGCAAGCACCAA+TGG 0.490539 7_1:+23549405 None:intergenic
TATGAGGAGAAGAAACTTGA+AGG 0.494429 7_1:-23549626 Msa1014530:CDS
AGTCAGAATTGCATTGTCAA+TGG 0.494531 7_1:-23550304 Msa1014530:CDS
TGGAGGAAACTTCACGAAAG+AGG 0.504865 7_1:-23554533 Msa1014530:CDS
TTTCGTGAAGTTTCCTCCAA+AGG 0.509184 7_1:+23554537 None:intergenic
GGTGAAGTTTCCATCGGAGG+AGG 0.511013 7_1:+23559741 None:intergenic
TGGTGGAAACTTCACGAAAG+AGG 0.511536 7_1:-23555897 Msa1014530:CDS
ATTAATGAAATATTAATTGG+TGG 0.513347 7_1:-23552376 Msa1014530:CDS
ATGTTGTCCCATTATACAAA+GGG 0.513721 7_1:+23550344 None:intergenic
GATGAGCATCAGACCACCTC+CGG 0.516914 7_1:-23550671 Msa1014530:CDS
TCATTCTCATAGTAAATTGA+AGG 0.519956 7_1:+23549875 None:intergenic
CGTGAAGTTTCCTCCAATGG+AGG 0.521228 7_1:+23552887 None:intergenic
CTCTTCCGTAAAGTTTCCAC+CGG 0.525681 7_1:+23552333 None:intergenic
CTCTTCCGTAAAGTTTCCAC+CGG 0.525681 7_1:+23553588 None:intergenic
CGTGAAGTTTCCACCAAAGG+AGG 0.525767 7_1:+23555904 None:intergenic
TGGGCACCGTTTCTTGTGAA+GGG 0.526580 7_1:-23550028 Msa1014530:CDS
GTCAAGTTTGCATTGTGAGA+AGG 0.531718 7_1:+23550058 None:intergenic
GATGGGCGTCAGACCTCCAT+TGG 0.532563 7_1:-23552900 Msa1014530:CDS
CAATATAGGTAGCTTGAGTC+CGG 0.534234 7_1:+23550277 None:intergenic
CAAGCTACCTATATTGGAGA+TGG 0.534922 7_1:-23550270 Msa1014530:CDS
AGGTCCTGGCAAGCACCAAT+GGG 0.535727 7_1:+23549406 None:intergenic
TTTCGTGAAGTTTCCACCAA+AGG 0.536555 7_1:+23555901 None:intergenic
GAGCGTCAGACCTCCTTTGG+TGG 0.540225 7_1:-23555914 Msa1014530:CDS
GAAGGGTGATCAAAGAAGAA+AGG 0.541962 7_1:-23550011 Msa1014530:CDS
TTCTGTGAAGTTTCCACCAG+AGG 0.545010 7_1:+23559177 None:intergenic
TTGAGACCAGATGGTCATGC+AGG 0.546721 7_1:-23549491 Msa1014530:CDS
GGGCATCAAACCTCCTTTGG+AGG 0.549110 7_1:-23554550 Msa1014530:CDS
CTCTACCGTAAAGTTTCCAC+CGG 0.549346 7_1:+23556599 None:intergenic
TATCAACATCATACCTCTAC+CGG 0.549946 7_1:-23553607 Msa1014530:CDS
TTGTTGGAGACTCTTTAGCT+AGG 0.550665 7_1:-23550171 Msa1014530:CDS
GGGCATCGGACCTCCTCCGA+TGG 0.551265 7_1:-23559751 Msa1014530:CDS
TAGTGGAAACTTCACGAAAG+AGG 0.553514 7_1:-23551609 Msa1014530:CDS
CGTGAAGTTTCCTCCAAAGG+AGG 0.554900 7_1:+23554540 None:intergenic
GATCAACATCATACCTCTAC+CGG 0.556600 7_1:-23552352 Msa1014530:CDS
GATCAACATCATACCTCTAC+CGG 0.556600 7_1:-23556618 Msa1014530:CDS
CGGTGGAAACTTCACGAAAG+AGG 0.561511 7_1:-23550651 Msa1014530:CDS
TTTCGTGAAGTTTCCACTAG+AGG 0.562502 7_1:+23551613 None:intergenic
TTCCAAGTATCAATAGGTCC+TGG 0.562983 7_1:+23549392 None:intergenic
TTGCATTGTCAATGGAAGAC+CGG 0.563436 7_1:-23550296 Msa1014530:CDS
CGTGAAGTTTCCACTAGAGG+AGG 0.569107 7_1:+23551616 None:intergenic
TACAAAACGATTGTACCCAT+TGG 0.571841 7_1:-23549421 Msa1014530:CDS
ATTAATGAAATATTGAATGG+TGG 0.571912 7_1:-23553631 Msa1014530:CDS
ATTAATGAAATATTGAATGG+TGG 0.571912 7_1:-23555282 Msa1014530:CDS
ATTAATGAAATATTGAATGG+TGG 0.571912 7_1:-23556642 Msa1014530:CDS
CATGTTGTCCCATTATACAA+AGG 0.572116 7_1:+23550343 None:intergenic
TTTGGTGAAGTTTCCATCGG+AGG 0.573605 7_1:+23559738 None:intergenic
GGATCATGTAAATGAGAAGT+GGG 0.575626 7_1:-23549960 Msa1014530:CDS
TGAATGGTGGAGATGGGCAT+CGG 0.578117 7_1:-23559765 None:intergenic
AGAGGAAGCTGAAAATGCTA+AGG 0.578269 7_1:-23549573 Msa1014530:CDS
GACAACATGTAATGAGATCA+GGG 0.579294 7_1:-23550329 Msa1014530:CDS
TTGGCATTGTTGAGACCAGA+TGG 0.580057 7_1:-23549500 Msa1014530:CDS
GGGCGTCAGACCTCCATTGG+AGG 0.583262 7_1:-23552897 Msa1014530:CDS
GATGGACATCATACCTCCCC+AGG 0.583297 7_1:-23558126 Msa1014530:CDS
TGGATCATGTAAATGAGAAG+TGG 0.584077 7_1:-23549961 Msa1014530:CDS
ATATAGGCTCTGATGGGAGG+TGG 0.587055 7_1:-23550087 Msa1014530:CDS
GGTGATCAAAGAAGAAAGGA+AGG 0.592694 7_1:-23550007 Msa1014530:CDS
TGTGAAGTTTCCACCAGAGG+AGG 0.602149 7_1:+23559180 None:intergenic
TGGTGGAAACTTCACAGAAG+AGG 0.603811 7_1:-23559173 Msa1014530:CDS
ATCATATAGGCTCTGATGGG+AGG 0.608644 7_1:-23550090 Msa1014530:CDS
GGGCATCATACCTCCTCTGG+TGG 0.613367 7_1:-23559190 Msa1014530:CDS
TTTCGTGAAGTTTCCACCGG+AGG 0.615197 7_1:+23550655 None:intergenic
CGATGGAAACTTCACCAAAG+AGG 0.616956 7_1:-23559734 Msa1014530:CDS
TCAATCATATAGGCTCTGAT+GGG 0.619159 7_1:-23550093 Msa1014530:CDS
CAACATCATACCTCTACCGG+TGG 0.622038 7_1:-23553604 Msa1014530:CDS
CAAGCACCTTCAAAATGAGT+AGG 0.622237 7_1:+23549689 None:intergenic
CCCTTAATACCATAATTGAG+AGG 0.626460 7_1:-23549760 Msa1014530:CDS
GAAGGTGCTTGGGATAAGGG+TGG 0.629002 7_1:-23549677 Msa1014530:CDS
AACAGAAGGAGTATATTACT+AGG 0.631296 7_1:-23548957 Msa1014530:three_prime_UTR
AATTGGGTTCATGACAAGAG+AGG 0.631764 7_1:-23550367 Msa1014530:CDS
GAGCATCAGACCACCTCCGG+TGG 0.632103 7_1:-23550668 Msa1014530:CDS
CAACATCATACCTCTACCAG+TGG 0.638485 7_1:-23555255 Msa1014530:CDS
TCGTGTGTTAAATTTGATCG+AGG 0.643938 7_1:-23548821 Msa1014530:three_prime_UTR
CAACATCATACCTCTACCGG+TGG 0.645251 7_1:-23552349 Msa1014530:CDS
CAACATCATACCTCTACCGG+TGG 0.645251 7_1:-23556615 Msa1014530:CDS
CAAATTTCTGAGTGTCACAA+CGG 0.650071 7_1:-23559320 Msa1014530:intron
AAATGTATTGTATTATGGTG+TGG 0.675839 7_1:+23549983 None:intergenic
GTGATCAAAGAAGAAAGGAA+GGG 0.689434 7_1:-23550006 Msa1014530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATTAATATATAT+CGG + chr7_1:23557107-23557126 None:intergenic 0.0%
!! TTAATTTATAGATACTTTAT+AGG - chr7_1:23549120-23549139 Msa1014530:three_prime_UTR 10.0%
!! ATTATTAATGAAAAATTGAA+TGG - chr7_1:23549246-23549265 Msa1014530:three_prime_UTR 10.0%
!!! CATAATAGTTATTTTAAAAT+AGG - chr7_1:23549509-23549528 Msa1014530:CDS 10.0%
!! ATTGAAAAAATTATTATACT+CGG + chr7_1:23549906-23549925 None:intergenic 10.0%
!! ATTATTAATGAAAAATTGAA+TGG - chr7_1:23549246-23549265 Msa1014530:three_prime_UTR 10.0%
!! AATTAATTTCAATCATATTA+TGG - chr7_1:23550420-23550439 Msa1014530:intron 10.0%
!! ATTGAAAAAATTATAATACT+CGG + chr7_1:23550628-23550647 None:intergenic 10.0%
!! ATTAAAAAAAATTAATTGTG+CGG - chr7_1:23551036-23551055 Msa1014530:intron 10.0%
!! ATTATTAATGAAATATTGAA+TGG - chr7_1:23551821-23551840 Msa1014530:intron 10.0%
!! AATTAATTTCAATCATATTA+TGG - chr7_1:23550420-23550439 Msa1014530:intron 10.0%
!! AACAATAGATAAATTAATAA+TGG + chr7_1:23552912-23552931 None:intergenic 10.0%
!! ATTATTAATGAAATATTGAA+TGG - chr7_1:23551821-23551840 Msa1014530:intron 10.0%
!! GAATTATAAATTTAAATTGT+TGG - chr7_1:23553611-23553630 Msa1014530:CDS 10.0%
!!! AAACATTGAATTATTATTTT+TGG + chr7_1:23553724-23553743 None:intergenic 10.0%
!! ATTATTAATGAAATATTGAA+TGG - chr7_1:23551821-23551840 Msa1014530:intron 10.0%
!! AATTAATTTCAATCATATTA+TGG - chr7_1:23550420-23550439 Msa1014530:intron 10.0%
!! AATTAATTTCAATCATATTA+TGG - chr7_1:23550420-23550439 Msa1014530:intron 10.0%
!! ATAAAATATAAACTAATCTT+TGG - chr7_1:23553672-23553691 Msa1014530:intron 10.0%
!!! TAGAACATTTTTAATTTTTT+TGG + chr7_1:23557244-23557263 None:intergenic 10.0%
!! TTAATTTATAGATACTTTAT+AGG - chr7_1:23549120-23549139 Msa1014530:three_prime_UTR 10.0%
!! ATTATTAATGAAAAATTGAA+TGG - chr7_1:23549246-23549265 Msa1014530:three_prime_UTR 10.0%
!!! GTTTTAATTTTCTTAATAAA+TGG - chr7_1:23559456-23559475 Msa1014530:intron 10.0%
!!! AATAATACATATTTTAAGCA+CGG - chr7_1:23549374-23549393 Msa1014530:CDS 15.0%
!! TTGAAAAAATTATTATACTC+GGG + chr7_1:23549905-23549924 None:intergenic 15.0%
!!! TTGTTTTAAAGTTTATATCA+AGG - chr7_1:23549962-23549981 Msa1014530:CDS 15.0%
!! TTGAAAAAATTATAATACTC+GGG + chr7_1:23550627-23550646 None:intergenic 15.0%
!!! AATTTGATCAATATTTTTGA+GGG - chr7_1:23550793-23550812 Msa1014530:intron 15.0%
!!! ACTTTGAATTTGTTTTTAAA+TGG + chr7_1:23550873-23550892 None:intergenic 15.0%
!!! AGATATTTAGAAGAAAATTT+TGG - chr7_1:23550920-23550939 Msa1014530:intron 15.0%
!!! GATATTTAGAAGAAAATTTT+GGG - chr7_1:23550921-23550940 Msa1014530:intron 15.0%
!! TAGCTAATGTAAAAAAAAAT+AGG - chr7_1:23551143-23551162 Msa1014530:intron 15.0%
!!! ACGATTTTTAATATTTTTGA+TGG + chr7_1:23551315-23551334 None:intergenic 15.0%
!!! CTATAAAGTATCTATAAATT+AGG + chr7_1:23549122-23549141 None:intergenic 15.0%
!! CTAATTTATAGATACTTTAT+AGG - chr7_1:23551696-23551715 Msa1014530:intron 15.0%
!!! TTACTTTAGAAGAAAATTTT+GGG - chr7_1:23552419-23552438 Msa1014530:intron 15.0%
!! ATTGTAAAAATTATCATACT+CGG + chr7_1:23553473-23553492 None:intergenic 15.0%
!!! TTACTTTAGTAGAAAATTTT+GGG - chr7_1:23553772-23553791 Msa1014530:intron 15.0%
!! AATAATAATTGAGATTACAA+AGG + chr7_1:23553840-23553859 None:intergenic 15.0%
!!! AACGTTTTTAAATTTTATGA+CGG + chr7_1:23554326-23554345 None:intergenic 15.0%
!! AAAGAAGAAAATAACTTATT+TGG - chr7_1:23551503-23551522 Msa1014530:intron 15.0%
!! AACTTATAGATATACTTTAT+AGG - chr7_1:23554709-23554728 Msa1014530:intron 15.0%
!! TTGTAAAAATTATCATACTA+GGG + chr7_1:23555137-23555156 None:intergenic 15.0%
!! ATTGTAAAAATTATCATACT+AGG + chr7_1:23553473-23553492 None:intergenic 15.0%
!!! TATACTTTAGAAGAAAATTT+TGG - chr7_1:23555426-23555445 Msa1014530:intron 15.0%
!!! ATACTTTAGAAGAAAATTTT+GGG - chr7_1:23550200-23550219 Msa1014530:CDS 15.0%
!! TTAACTTATAGATACTTTAT+AGG - chr7_1:23555962-23555981 Msa1014530:intron 15.0%
!! ATTAATGAAATATTAATTGG+TGG - chr7_1:23556090-23556109 Msa1014530:intron 15.0%
!! TTCAAAAAAATTATCATACT+CGG + chr7_1:23556400-23556419 None:intergenic 15.0%
!!! TATAATGATCTTTAAAATTG+TGG - chr7_1:23556515-23556534 Msa1014530:intron 15.0%
!!! AATTTGATCGATATTTTTTA+GGG - chr7_1:23556564-23556583 Msa1014530:intron 15.0%
!!! TTACTTTAGAAGAATATTTT+GGG - chr7_1:23556694-23556713 Msa1014530:intron 15.0%
!! ACTTATATAACATTTATATG+AGG + chr7_1:23557390-23557409 None:intergenic 15.0%
!!! AGAGAAATTTTTTAATTAAG+AGG + chr7_1:23557703-23557722 None:intergenic 15.0%
!!! CTGATTATTCTTTTAATTTT+TGG - chr7_1:23558029-23558048 Msa1014530:intron 15.0%
!! AAATCGAAATATAATGATAT+TGG - chr7_1:23558648-23558667 Msa1014530:intron 15.0%
!!! TTTTTTTTTCCTTACATTTT+AGG + chr7_1:23559175-23559194 None:intergenic 15.0%
!!! TTTTTTTTTGCTTACATTTT+GGG + chr7_1:23559213-23559232 None:intergenic 15.0%
!!! TTTTTTTTTTGCTTACATTT+TGG + chr7_1:23559214-23559233 None:intergenic 15.0%
!! AAAAAAAATCTTGAAAGAAA+TGG + chr7_1:23559276-23559295 None:intergenic 15.0%
!!! TTTTTTTTTTGCTTACAATT+TGG - chr7_1:23559486-23559505 Msa1014530:intron 15.0%
!!! AATCAATTTTAGTCATACTA+TGG - chr7_1:23548792-23548811 Msa1014530:three_prime_UTR 20.0%
!!! AATCTTGATCGATATTTTTT+TGG - chr7_1:23549047-23549066 Msa1014530:three_prime_UTR 20.0%
!!! ATCTTGATCGATATTTTTTT+GGG - chr7_1:23549048-23549067 Msa1014530:three_prime_UTR 20.0%
!!! CACAATAGAATTTTTTTTAC+CGG + chr7_1:23549185-23549204 None:intergenic 20.0%
!! ATTAATGAAAAATTGAATGG+TGG - chr7_1:23549249-23549268 Msa1014530:three_prime_UTR 20.0%
!!! ATAATACATATTTTAAGCAC+GGG - chr7_1:23549375-23549394 Msa1014530:CDS 20.0%
!!! TCAAATGATTAACTTTTACA+GGG + chr7_1:23549613-23549632 None:intergenic 20.0%
!!! TTCAAATGATTAACTTTTAC+AGG + chr7_1:23549614-23549633 None:intergenic 20.0%
!!! TTCAAATGATTTACTTTTAC+AGG - chr7_1:23549803-23549822 Msa1014530:CDS 20.0%
!!! TCAAATGATTTACTTTTACA+GGG - chr7_1:23549804-23549823 Msa1014530:CDS 20.0%
!! AGACAAATATTAAGATTACA+CGG + chr7_1:23550270-23550289 None:intergenic 20.0%
!! TTAATAATTGAAACTACAAG+TGG + chr7_1:23550301-23550320 None:intergenic 20.0%
!! ATTAATGAAAAATTGAATGG+TGG - chr7_1:23549249-23549268 Msa1014530:three_prime_UTR 20.0%
!! AATTCAATGAATATCAGTAT+AGG - chr7_1:23550544-23550563 Msa1014530:intron 20.0%
!!! GAATTTGATCAATATTTTTG+AGG - chr7_1:23550792-23550811 Msa1014530:intron 20.0%
!!! ATTTGATCAATATTTTTGAG+GGG - chr7_1:23550794-23550813 Msa1014530:intron 20.0%
!! GACAATAATTGAAATTATAC+CGG + chr7_1:23550989-23551008 None:intergenic 20.0%
!! TTAATAATTGAAACTACATG+TGG + chr7_1:23551021-23551040 None:intergenic 20.0%
!!! AATCTTGATCGTAATTTTTT+AGG - chr7_1:23551623-23551642 Msa1014530:CDS 20.0%
!!! ATCTTGATCGTAATTTTTTA+GGG - chr7_1:23551624-23551643 Msa1014530:CDS 20.0%
!! TACTTTATAGGAAGAAAATT+TGG - chr7_1:23551708-23551727 Msa1014530:intron 20.0%
!! ACTTTATAGGAAGAAAATTT+GGG - chr7_1:23551709-23551728 Msa1014530:intron 20.0%
!!! ATAGAATTTTTTTACTAGAG+AGG + chr7_1:23551756-23551775 None:intergenic 20.0%
!! ATTAATGAAATATTGAATGG+TGG - chr7_1:23551824-23551843 Msa1014530:intron 20.0%
!! TTGTAAAAATTATCATACTC+AGG + chr7_1:23552131-23552150 None:intergenic 20.0%
!! GATAATGATCTTCAAAATTA+TGG - chr7_1:23552239-23552258 Msa1014530:intron 20.0%
!!! GTTACTTTAGAAGAAAATTT+TGG - chr7_1:23552418-23552437 Msa1014530:intron 20.0%
!!! AATCAATTTTAGTCTCAATA+TGG - chr7_1:23552629-23552648 Msa1014530:intron 20.0%
!! ATTGCTAATGTATAAAACAT+AGG - chr7_1:23552774-23552793 Msa1014530:intron 20.0%
!!! AATCTTGATCGATATTTTTT+AGG - chr7_1:23549047-23549066 Msa1014530:three_prime_UTR 20.0%
!!! ATCTTGATCGATATTTTTTA+GGG - chr7_1:23552984-23553003 Msa1014530:intron 20.0%
!! AAAGAAATTTGAATTGTACA+AGG + chr7_1:23553018-23553037 None:intergenic 20.0%
!!! ATAGTAATTTTTTACTAGAG+AGG + chr7_1:23553116-23553135 None:intergenic 20.0%
!! ATTAATGAAATATTGAATGG+TGG - chr7_1:23551824-23551843 Msa1014530:intron 20.0%
!! TTGTAAAAATTATCATACTC+GGG + chr7_1:23552131-23552150 None:intergenic 20.0%
!!! AATTTGATCGATATTTTTGA+GGG - chr7_1:23553640-23553659 Msa1014530:CDS 20.0%
!!! GTTACTTTAGTAGAAAATTT+TGG - chr7_1:23553771-23553790 Msa1014530:intron 20.0%
!! TTAATAATTGAAACTACATG+TGG + chr7_1:23551021-23551040 None:intergenic 20.0%
!!! AATCAATTTTAGTCACAATA+TGG - chr7_1:23553993-23554012 Msa1014530:intron 20.0%
!! AAGTCTAAATGTAAACATTA+GGG - chr7_1:23554044-23554063 Msa1014530:intron 20.0%
!! AAATAAATTGTTCAAGGTAA+AGG + chr7_1:23554246-23554265 None:intergenic 20.0%
!! TGAATGAAATAAATTGTTCA+AGG + chr7_1:23554252-23554271 None:intergenic 20.0%
!!! AATCTTGATCGATATTTTTT+AGG - chr7_1:23549047-23549066 Msa1014530:three_prime_UTR 20.0%
!!! ATCTTGATCGATATTTTTTA+GGG - chr7_1:23552984-23553003 Msa1014530:intron 20.0%
!!! ACTTTATAGGAAGAAAATTT+TGG - chr7_1:23551709-23551728 Msa1014530:intron 20.0%
!! ATTAATGAAATATTGAATGG+TGG - chr7_1:23551824-23551843 Msa1014530:intron 20.0%
!!! TGATAATGATCTTCAAAATA+TGG - chr7_1:23555250-23555269 Msa1014530:CDS 20.0%
!! TATGGAGAATTATAAATTGT+TGG - chr7_1:23555268-23555287 Msa1014530:CDS 20.0%
!!! AATTTGATCGATATTTTTGA+GGG - chr7_1:23553640-23553659 Msa1014530:CDS 20.0%
!! TTAATAATTGAAACTACATG+TGG + chr7_1:23551021-23551040 None:intergenic 20.0%
!!! AATCTTGATCGATATTTTTT+AGG - chr7_1:23549047-23549066 Msa1014530:three_prime_UTR 20.0%
!!! ATCTTGATCGATATTTTTTA+GGG - chr7_1:23552984-23553003 Msa1014530:intron 20.0%
!!! ACTTTATAGGAAGAAAATTT+TGG - chr7_1:23551709-23551728 Msa1014530:intron 20.0%
!!! ATAGTAATTTTTTACTAGAG+AGG + chr7_1:23553116-23553135 None:intergenic 20.0%
!! TTAATAATTGAAACTGTTTG+TGG + chr7_1:23556075-23556094 None:intergenic 20.0%
!! AAAATGTTATAATACGTACT+TGG + chr7_1:23556162-23556181 None:intergenic 20.0%
!! TCAAAAAAATTATCATACTC+GGG + chr7_1:23556399-23556418 None:intergenic 20.0%
!! TGGAGAATTATAAAAATTGT+TGG - chr7_1:23556535-23556554 Msa1014530:intron 20.0%
!!! GAATTTGATCGATATTTTTT+AGG - chr7_1:23556563-23556582 Msa1014530:intron 20.0%
!!! ATTTGATCGATATTTTTTAG+GGG - chr7_1:23556565-23556584 Msa1014530:intron 20.0%
!!! GTTACTTTAGAAGAATATTT+TGG - chr7_1:23556693-23556712 Msa1014530:intron 20.0%
!! TTAATAATTGAAACTACATG+TGG + chr7_1:23551021-23551040 None:intergenic 20.0%
!!! AATCTTGATCGATATTTTTT+AGG - chr7_1:23549047-23549066 Msa1014530:three_prime_UTR 20.0%
!!! ATCTTGATCGATATTTTTTA+GGG - chr7_1:23552984-23553003 Msa1014530:intron 20.0%
!!! ATTTGATTTATACATAGAAG+AGG + chr7_1:23557599-23557618 None:intergenic 20.0%
!! TACTTTATAGGAAGAAAATT+TGG - chr7_1:23551708-23551727 Msa1014530:intron 20.0%
!! ACTTTATAGGAAGAAAATTT+GGG - chr7_1:23551709-23551728 Msa1014530:intron 20.0%
!! ATTAATGAAAAATTGAATGG+TGG - chr7_1:23549249-23549268 Msa1014530:three_prime_UTR 20.0%
!!! AATTAATTTTAGTCACACTA+TGG - chr7_1:23557875-23557894 Msa1014530:intron 20.0%
!!! AAATCATGTGACTTTTTAAT+TGG - chr7_1:23558075-23558094 Msa1014530:intron 20.0%
!! CCTATATGATTGATATATAT+AGG + chr7_1:23558366-23558385 None:intergenic 20.0%
!! CCTATATATATCAATCATAT+AGG - chr7_1:23558363-23558382 Msa1014530:intron 20.0%
!! AAGGAAAAATCTAAACAAAT+TGG - chr7_1:23558912-23558931 Msa1014530:intron 20.0%
!! ACAAATTGGATTAAATTTGA+AGG - chr7_1:23558926-23558945 Msa1014530:intron 20.0%
!!! ATTTCATTGGTTATTGATTA+TGG + chr7_1:23559366-23559385 None:intergenic 20.0%
!! GATGTAAAAACAAATTTCAT+TGG + chr7_1:23559379-23559398 None:intergenic 20.0%
!!! TGTGTTTTCTTTGAAATATA+AGG + chr7_1:23559412-23559431 None:intergenic 20.0%
!! TAATATATAGGTAGAAGTGT+CGG + chr7_1:23548991-23549010 None:intergenic 25.0%
!!! TCTTGATCGATATTTTTTTG+GGG - chr7_1:23549049-23549068 Msa1014530:three_prime_UTR 25.0%
! TTAATAATTGAAACTGCATG+TGG + chr7_1:23549234-23549253 None:intergenic 25.0%
!! CAAATGATTAACTTTTACAG+GGG + chr7_1:23549612-23549631 None:intergenic 25.0%
!!! CAAATGATTTACTTTTACAG+GGG - chr7_1:23549805-23549824 Msa1014530:CDS 25.0%
!!! ATCGTTGACACATATTTTAA+AGG + chr7_1:23549875-23549894 None:intergenic 25.0%
! AATTTGATCGATATTGTAGT+GGG - chr7_1:23550071-23550090 Msa1014530:CDS 25.0%
! GACAAATATTAAGATTACAC+GGG + chr7_1:23550269-23550288 None:intergenic 25.0%
! AATAAATCATCCACAACAAT+GGG + chr7_1:23550473-23550492 None:intergenic 25.0%
! AAATAAATCATCCACAACAA+TGG + chr7_1:23549404-23549423 None:intergenic 25.0%
! AAAAAAATTAATTGTGCGGA+TGG - chr7_1:23551040-23551059 Msa1014530:intron 25.0%
! AAAAAATTAATTGTGCGGAT+GGG - chr7_1:23551041-23551060 Msa1014530:intron 25.0%
! GACACATATATGAAATTTGT+CGG + chr7_1:23551456-23551475 None:intergenic 25.0%
!!! TCTTGATCGTAATTTTTTAG+GGG - chr7_1:23551625-23551644 Msa1014530:CDS 25.0%
! TTTGAAGATCATTATCAATC+TGG + chr7_1:23552235-23552254 None:intergenic 25.0%
!!! AATTTGATCGATAGTTTTGT+GGG - chr7_1:23552286-23552305 Msa1014530:intron 25.0%
!! ACAAGGGAAAAAACTTTTAT+GGG + chr7_1:23552460-23552479 None:intergenic 25.0%
!! TACAAGGGAAAAAACTTTTA+TGG + chr7_1:23552461-23552480 None:intergenic 25.0%
! AAACTTTGATGTCAAACATT+AGG - chr7_1:23552667-23552686 Msa1014530:intron 25.0%
! AACTTTGATGTCAAACATTA+GGG - chr7_1:23552668-23552687 Msa1014530:intron 25.0%
! ATATAAATAGCTCAAGTTAG+AGG + chr7_1:23552866-23552885 None:intergenic 25.0%
!!! TCTTGATCGATATTTTTTAG+GGG - chr7_1:23552985-23553004 Msa1014530:intron 25.0%
!! CCATAAAGTATCTATAAGTT+AGG + chr7_1:23553058-23553077 None:intergenic 25.0%
! CCTAACTTATAGATACTTTA+TGG - chr7_1:23553055-23553074 Msa1014530:intron 25.0%
!! ACTTTATGGCAAGAAAATTT+TGG - chr7_1:23553069-23553088 Msa1014530:intron 25.0%
! TTAATAATTGAAACTGCATG+TGG + chr7_1:23549234-23549253 None:intergenic 25.0%
! AAATAAATCATCCACAACAA+CGG + chr7_1:23549404-23549423 None:intergenic 25.0%
!!! GAATTTGATCGATATTTTTG+AGG - chr7_1:23553639-23553658 Msa1014530:CDS 25.0%
!!! ATTTGATCGATATTTTTGAG+GGG - chr7_1:23553641-23553660 Msa1014530:CDS 25.0%
!! ACAAAGGAGAAAACTTTTAT+GGG + chr7_1:23553824-23553843 None:intergenic 25.0%
!! TACAAAGGAGAAAACTTTTA+TGG + chr7_1:23553825-23553844 None:intergenic 25.0%
! CAAGTCTAAATGTAAACATT+AGG - chr7_1:23554043-23554062 Msa1014530:intron 25.0%
! AGTCTAAATGTAAACATTAG+GGG - chr7_1:23554045-23554064 Msa1014530:intron 25.0%
! ATACAACATCAAATCAATTG+TGG - chr7_1:23554068-23554087 Msa1014530:intron 25.0%
!! TGCTATGTTTTATACAATAG+CGG + chr7_1:23554158-23554177 None:intergenic 25.0%
! GACGGTAGATAAATTAATAA+AGG + chr7_1:23554308-23554327 None:intergenic 25.0%
! TTCTTTACTTCAATATTCCT+AGG + chr7_1:23554500-23554519 None:intergenic 25.0%
!!! TCTTGATCGATATTTTTTAG+GGG - chr7_1:23552985-23553004 Msa1014530:intron 25.0%
! ATTTGAATTGTACAAAGAAG+AGG + chr7_1:23554663-23554682 None:intergenic 25.0%
!!! CTAGTAATTTTTTTCTAGAG+AGG + chr7_1:23554769-23554788 None:intergenic 25.0%
! TTAATAATTGAAACTGCATG+TGG + chr7_1:23549234-23549253 None:intergenic 25.0%
! AAAATGTTGTAACACATACT+TGG + chr7_1:23554907-23554926 None:intergenic 25.0%
! AAATATATCATCCACAACAA+CGG + chr7_1:23554990-23555009 None:intergenic 25.0%
! TTTGAAGATCATTATCAATC+TGG + chr7_1:23552235-23552254 None:intergenic 25.0%
!!! GAATTTGATCGATATTTTTG+AGG - chr7_1:23553639-23553658 Msa1014530:CDS 25.0%
!!! ATTTGATCGATATTTTTGAG+GGG - chr7_1:23553641-23553660 Msa1014530:CDS 25.0%
! GATAATAATCGAGATTACAA+GGG + chr7_1:23555495-23555514 None:intergenic 25.0%
! AGATAATAATCGAGATTACA+AGG + chr7_1:23555496-23555515 None:intergenic 25.0%
!!! TTCTTCTTCTTTTAAAAACG+CGG - chr7_1:23555632-23555651 Msa1014530:intron 25.0%
! TTCTTTACTTCAATATTCCT+TGG + chr7_1:23554500-23554519 None:intergenic 25.0%
!!! TCTTGATCGATATTTTTTAG+GGG - chr7_1:23552985-23553004 Msa1014530:intron 25.0%
! ATTTGAATTGTACAAAGAAG+AGG + chr7_1:23554663-23554682 None:intergenic 25.0%
! AAATAAATCAACCACAACAA+CGG + chr7_1:23556245-23556264 None:intergenic 25.0%
! AATAATTGAGATGATTACAC+GGG + chr7_1:23556762-23556781 None:intergenic 25.0%
! CAATAATTGAGATGATTACA+CGG + chr7_1:23556763-23556782 None:intergenic 25.0%
! ATACAACATCAAATCAATTG+CGG - chr7_1:23554068-23554087 Msa1014530:intron 25.0%
!! TCTTATGGTTTTTACATTAG+CGG + chr7_1:23557082-23557101 None:intergenic 25.0%
!! TAATATATATCGGTGTCTTA+TGG + chr7_1:23557097-23557116 None:intergenic 25.0%
! AAATAAATTGCTCAAGTTAG+AGG + chr7_1:23557161-23557180 None:intergenic 25.0%
! GGCTGTAGATAAATTAATAA+AGG + chr7_1:23557223-23557242 None:intergenic 25.0%
!!! TCTTGATCGATATTTTTTAG+GGG - chr7_1:23552985-23553004 Msa1014530:intron 25.0%
! TTAATAATTGAAACTGCATG+TGG + chr7_1:23549234-23549253 None:intergenic 25.0%
! AAAATTGTGTAACCATAACA+TGG + chr7_1:23557974-23557993 None:intergenic 25.0%
!!! CTTTTAATTTTTGGCAGAAA+AGG - chr7_1:23558038-23558057 Msa1014530:intron 25.0%
!!! TGACTTTTTAATTGGCAATT+GGG - chr7_1:23558083-23558102 Msa1014530:intron 25.0%
!!! ATGAGTTTAAGAAAAGTGTT+TGG + chr7_1:23558255-23558274 None:intergenic 25.0%
!! AACATGAACATAGTTTTTGT+TGG - chr7_1:23558279-23558298 Msa1014530:intron 25.0%
! AGTGGATAATAAGCAAATAA+GGG + chr7_1:23558334-23558353 None:intergenic 25.0%
! AAATGTATTGTATTATGGTG+TGG + chr7_1:23558486-23558505 None:intergenic 25.0%
! ACACCATAATACAATACATT+TGG - chr7_1:23558485-23558504 Msa1014530:intron 25.0%
! GATCCAAATGTATTGTATTA+TGG + chr7_1:23558491-23558510 None:intergenic 25.0%
! TCATTCTCATAGTAAATTGA+AGG + chr7_1:23558594-23558613 None:intergenic 25.0%
! TATGAGAATGATTCAGTTAT+AGG - chr7_1:23558603-23558622 Msa1014530:intron 25.0%
!! ATTTTATGTTCCAATGAGAA+AGG - chr7_1:23558671-23558690 Msa1014530:intron 25.0%
!!! ACTTTTTTAGCAAATGGAAA+AGG + chr7_1:23559014-23559033 None:intergenic 25.0%
!!! TTTGGAACTTTTTTAGCAAA+TGG + chr7_1:23559020-23559039 None:intergenic 25.0%
!!! TACTTGGAATGAGATTTTTT+TGG - chr7_1:23559088-23559107 Msa1014530:intron 25.0%
!!! TTTTTCCTTACATTTTAGGA+CGG + chr7_1:23559171-23559190 None:intergenic 25.0%
!! GTTATTGATTATGGAGAAAA+TGG + chr7_1:23559357-23559376 None:intergenic 25.0%
!!! TCTTTGAAATATAAGGTTCA+CGG + chr7_1:23559405-23559424 None:intergenic 25.0%
!!! ATTTGTTGTATCACCTATTT+GGG - chr7_1:23559712-23559731 Msa1014530:intron 25.0%
ACATATACATAGATCCTCTT+TGG + chr7_1:23548749-23548768 None:intergenic 30.0%
CACGTATACAAGTAAACATT+AGG - chr7_1:23548840-23548859 Msa1014530:three_prime_UTR 30.0%
AATAAATTGCGACCATGTTA+TGG - chr7_1:23548876-23548895 Msa1014530:three_prime_UTR 30.0%
! TCCTATGTCTTTTACATTAG+CGG + chr7_1:23548966-23548985 None:intergenic 30.0%
!!! TAGAATTTTTTTTACCGGAG+AGG + chr7_1:23549180-23549199 None:intergenic 30.0%
! AAAAATTGAATGGTGGAGAT+GGG - chr7_1:23549256-23549275 Msa1014530:three_prime_UTR 30.0%
!! AAAGTGTTGTAACACATACT+TGG + chr7_1:23549321-23549340 None:intergenic 30.0%
TCAAATGACGTATAATTGCA+GGG + chr7_1:23549553-23549572 None:intergenic 30.0%
ATCAAATGACGTATAATTGC+AGG + chr7_1:23549554-23549573 None:intergenic 30.0%
!! TGTTTAACTTGACCAACTAA+GGG + chr7_1:23549692-23549711 None:intergenic 30.0%
TTGGTCAAGTTAAACAGAAA+AGG - chr7_1:23549696-23549715 Msa1014530:CDS 30.0%
TGGTCAAGTTAAACAGAAAA+GGG - chr7_1:23549697-23549716 Msa1014530:CDS 30.0%
GAATTTGATCGATATTGTAG+TGG - chr7_1:23550070-23550089 Msa1014530:CDS 30.0%
ATTTGATCGATATTGTAGTG+GGG - chr7_1:23550072-23550091 Msa1014530:CDS 30.0%
! TAATATATTGGTAGCAGTGT+CGG + chr7_1:23551172-23551191 None:intergenic 30.0%
AAGTGTATGTGCTTCATAAA+AGG - chr7_1:23551585-23551604 Msa1014530:intron 30.0%
AAAATGTTGTTACACGTACT+TGG + chr7_1:23551896-23551915 None:intergenic 30.0%
GGTAACATATATTTCAAGCA+CGG - chr7_1:23551949-23551968 Msa1014530:intron 30.0%
!! GAATTTGATCGATAGTTTTG+TGG - chr7_1:23552285-23552304 Msa1014530:intron 30.0%
!!! ATTTGATCGATAGTTTTGTG+GGG - chr7_1:23552287-23552306 Msa1014530:intron 30.0%
ACTTTGATGTCAAACATTAG+GGG - chr7_1:23552669-23552688 Msa1014530:intron 30.0%
GTACAACATCAAATCAATTG+TGG - chr7_1:23552692-23552711 Msa1014530:intron 30.0%
TGTACATCATAACCATAACA+TGG + chr7_1:23552718-23552737 None:intergenic 30.0%
TATTATATAGGTAGCAGTGT+TGG + chr7_1:23552803-23552822 None:intergenic 30.0%
TATCGATCAAGATTTAACGA+CGG + chr7_1:23552977-23552996 None:intergenic 30.0%
ATTTGAATTGTACAAGGAAG+AGG + chr7_1:23553012-23553031 None:intergenic 30.0%
GTAACACATATTTCAAGCAT+GGG - chr7_1:23553310-23553329 Msa1014530:intron 30.0%
TAACACATATTTCAAGCATG+GGG - chr7_1:23553311-23553330 Msa1014530:intron 30.0%
AAAATAGTTAATGGTGCAGA+TGG - chr7_1:23553895-23553914 Msa1014530:intron 30.0%
AAATAGTTAATGGTGCAGAT+GGG - chr7_1:23553896-23553915 Msa1014530:intron 30.0%
!! AAAGTTTTGTAACACGTACT+TGG + chr7_1:23553961-23553980 None:intergenic 30.0%
ACTCTTGAATATACTTTGTG+TGG - chr7_1:23554403-23554422 Msa1014530:intron 30.0%
AATATATCATCCACAACAAC+GGG + chr7_1:23554989-23555008 None:intergenic 30.0%
! ACAAGGGAGAAAACTTTTAT+GGG + chr7_1:23555479-23555498 None:intergenic 30.0%
! TACAAGGGAGAAAACTTTTA+TGG + chr7_1:23555480-23555499 None:intergenic 30.0%
TAAAAATTCAATGGTGCAGA+TGG - chr7_1:23555548-23555567 Msa1014530:intron 30.0%
AAAAATTCAATGGTGCAGAT+GGG - chr7_1:23555549-23555568 Msa1014530:intron 30.0%
!! AAAGTATTGTAACACGTACT+TGG + chr7_1:23555614-23555633 None:intergenic 30.0%
ACTCTTGAATATACTTTGTG+TGG - chr7_1:23554403-23554422 Msa1014530:intron 30.0%
TACTTCAATATTCCTTGGTT+CGG + chr7_1:23555751-23555770 None:intergenic 30.0%
AATAAATCAACCACAACAAC+GGG + chr7_1:23556244-23556263 None:intergenic 30.0%
AAATATTGAATGGTGCAGAT+TGG - chr7_1:23552532-23552551 Msa1014530:intron 30.0%
ACGTCTACATGTAAACATTA+GGG - chr7_1:23556968-23556987 Msa1014530:intron 30.0%
CATCATAGGTAACCATAATA+TGG + chr7_1:23557018-23557037 None:intergenic 30.0%
AACATTTATATGAGGTGTGT+GGG + chr7_1:23557382-23557401 None:intergenic 30.0%
TAACATTTATATGAGGTGTG+TGG + chr7_1:23557383-23557402 None:intergenic 30.0%
TAATTTACTTTGACACTCCT+AGG + chr7_1:23557426-23557445 None:intergenic 30.0%
ACGTAACATCCAATGAATTT+CGG - chr7_1:23557948-23557967 Msa1014530:intron 30.0%
!! GTGACTTTTTAATTGGCAAT+TGG - chr7_1:23558082-23558101 Msa1014530:intron 30.0%
ATGTTGTCCCATTATACAAA+GGG + chr7_1:23558125-23558144 None:intergenic 30.0%
! AAAGTGTTTGGTTCAAAAAC+TGG + chr7_1:23558243-23558262 None:intergenic 30.0%
CAGTGGATAATAAGCAAATA+AGG + chr7_1:23558335-23558354 None:intergenic 30.0%
!!! ATATATAGGTTTTGAAGCAG+TGG + chr7_1:23558352-23558371 None:intergenic 30.0%
GACTTGATTATGTTGTCATT+TGG - chr7_1:23558549-23558568 Msa1014530:intron 30.0%
! TTATGTTGTCATTTGGTCAT+TGG - chr7_1:23558556-23558575 Msa1014530:intron 30.0%
TACCATAATTGAGAGGAAAA+TGG - chr7_1:23558713-23558732 Msa1014530:intron 30.0%
! AACCATTTTCCTCTCAATTA+TGG + chr7_1:23558718-23558737 None:intergenic 30.0%
ATTGAGAGGAAAATGGTTAA+AGG - chr7_1:23558720-23558739 Msa1014530:intron 30.0%
TTGAGAGGAAAATGGTTAAA+GGG - chr7_1:23558721-23558740 Msa1014530:intron 30.0%
! TTTTCACCTACTCATTTTGA+AGG - chr7_1:23558771-23558790 Msa1014530:intron 30.0%
! GATAAGAAGTATGGAAATAG+AGG - chr7_1:23558875-23558894 Msa1014530:intron 30.0%
GGTGCTTGATATAACAAAAT+TGG - chr7_1:23558947-23558966 Msa1014530:intron 30.0%
! CAATCGTTTTGTACATACTT+TGG + chr7_1:23559038-23559057 None:intergenic 30.0%
ATCTCATTCCAAGTATCAAT+AGG + chr7_1:23559083-23559102 None:intergenic 30.0%
!!! TTTTTTGGAGATGATGAAGA+AGG - chr7_1:23559103-23559122 Msa1014530:intron 30.0%
!! TTTTTGGAGATGATGAAGAA+GGG - chr7_1:23559104-23559123 Msa1014530:intron 30.0%
!!! CTTACATTTTGGGATAATGA+AGG + chr7_1:23559203-23559222 None:intergenic 30.0%
! AACAGAAGGAGTATATTACT+AGG - chr7_1:23559509-23559528 Msa1014530:intron 30.0%
!! GATTTGTTGTATCACCTATT+TGG - chr7_1:23559711-23559730 Msa1014530:intron 30.0%
! CTTCATTGGTAACCATAACA+TGG + chr7_1:23548891-23548910 None:intergenic 35.0%
TGATGGAGTTTGTACTTCAT+TGG + chr7_1:23548905-23548924 None:intergenic 35.0%
ATGAAGTACAAACTCCATCA+TGG - chr7_1:23548905-23548924 Msa1014530:three_prime_UTR 35.0%
ACCGCTAATGTAAAAGACAT+AGG - chr7_1:23548962-23548981 Msa1014530:three_prime_UTR 35.0%
GTGTAATTATCTATGAAGCG+CGG + chr7_1:23549017-23549036 None:intergenic 35.0%
CAAATTTCTGAGTGTCACAA+CGG - chr7_1:23549146-23549165 Msa1014530:three_prime_UTR 35.0%
! GAAAAATTGAATGGTGGAGA+TGG - chr7_1:23549255-23549274 Msa1014530:three_prime_UTR 35.0%
! AACTTTTACAGGGGCAAAAT+GGG + chr7_1:23549603-23549622 None:intergenic 35.0%
! TAACTTTTACAGGGGCAAAA+TGG + chr7_1:23549604-23549623 None:intergenic 35.0%
!! CTGTTTAACTTGACCAACTA+AGG + chr7_1:23549693-23549712 None:intergenic 35.0%
!! AAAATGCCCTTAGTTGATGA+AGG + chr7_1:23549735-23549754 None:intergenic 35.0%
!!! TTCATCAACTAAGGGCATTT+TGG - chr7_1:23549734-23549753 Msa1014530:CDS 35.0%
ATGAGTGATTAACTCTGATG+AGG - chr7_1:23549772-23549791 Msa1014530:CDS 35.0%
TGAGTGATTAACTCTGATGA+GGG - chr7_1:23549773-23549792 Msa1014530:CDS 35.0%
!! TTACTTTTACAGGGGCAAAA+TGG - chr7_1:23549813-23549832 Msa1014530:CDS 35.0%
! TACTTTTACAGGGGCAAAAT+GGG - chr7_1:23549814-23549833 Msa1014530:CDS 35.0%
! CACGGGAAACAATCTTTTAT+GGG + chr7_1:23550252-23550271 None:intergenic 35.0%
! ACACGGGAAACAATCTTTTA+TGG + chr7_1:23550253-23550272 None:intergenic 35.0%
! GAAAAATTGAATGGTGGAGA+TGG - chr7_1:23549255-23549274 Msa1014530:three_prime_UTR 35.0%
!! AAAGTGTTGTAACACGTACT+TGG + chr7_1:23550388-23550407 None:intergenic 35.0%
GGTAACACATATTTCATGCA+CGG - chr7_1:23550441-23550460 Msa1014530:intron 35.0%
GTAACACATATTTCATGCAC+GGG - chr7_1:23550442-23550461 Msa1014530:intron 35.0%
! ATACCGGAGACAACTTTTAT+GGG + chr7_1:23550973-23550992 None:intergenic 35.0%
! TATACCGGAGACAACTTTTA+TGG + chr7_1:23550974-23550993 None:intergenic 35.0%
!! AAAGTGTTGTAACTCGTACT+TGG + chr7_1:23551106-23551125 None:intergenic 35.0%
AGAAAATGTTTATCGACGAG+GGG + chr7_1:23551361-23551380 None:intergenic 35.0%
GAGAAAATGTTTATCGACGA+GGG + chr7_1:23551362-23551381 None:intergenic 35.0%
TGAGAAAATGTTTATCGACG+AGG + chr7_1:23551363-23551382 None:intergenic 35.0%
!! AAAAAGTGTCATAGGAGTGT+CGG - chr7_1:23551549-23551568 Msa1014530:intron 35.0%
TATGAAGCACATACACTTCT+AGG + chr7_1:23551583-23551602 None:intergenic 35.0%
GTGACACTCACAAACAAAAA+AGG + chr7_1:23551676-23551695 None:intergenic 35.0%
!! AAAATTTGGGAGTGTCACAA+TGG - chr7_1:23551722-23551741 Msa1014530:intron 35.0%
!!! TTTGATCGATAGTTTTGTGG+GGG - chr7_1:23552288-23552307 Msa1014530:intron 35.0%
GACAGTAACTCAGATTACAA+GGG + chr7_1:23552476-23552495 None:intergenic 35.0%
AGACAGTAACTCAGATTACA+AGG + chr7_1:23552477-23552496 None:intergenic 35.0%
!! AAAGTGTTGTAACACGTACT+TGG + chr7_1:23550388-23550407 None:intergenic 35.0%
CTTTGATGTCAAACATTAGG+GGG - chr7_1:23552670-23552689 Msa1014530:intron 35.0%
AATCAATTGTGGCCATGTTA+TGG - chr7_1:23552703-23552722 Msa1014530:intron 35.0%
ATGATGTACAAACTCTGACA+TGG - chr7_1:23552728-23552747 Msa1014530:intron 35.0%
!! AAGATTTAACGACGGGTTAT+AGG + chr7_1:23552969-23552988 None:intergenic 35.0%
ATCGATCAAGATTTAACGAC+GGG + chr7_1:23552976-23552995 None:intergenic 35.0%
GGTAACACATATTTCAAGCA+TGG - chr7_1:23553309-23553328 Msa1014530:intron 35.0%
AATCAATTGTGGCCATGTTA+TGG - chr7_1:23552703-23552722 Msa1014530:intron 35.0%
CATCATAGGTAACCATAACA+TGG + chr7_1:23554094-23554113 None:intergenic 35.0%
TGAGGAATGTTTATCAACGA+GGG + chr7_1:23554373-23554392 None:intergenic 35.0%
! GTTGATAAACATTCCTCACA+AGG - chr7_1:23554375-23554394 Msa1014530:intron 35.0%
! TACAAGTGTCAAAGGAGTAT+CGG - chr7_1:23554558-23554577 Msa1014530:intron 35.0%
TATGAAGCACATACACTTCT+AGG + chr7_1:23551583-23551602 None:intergenic 35.0%
TATCAACATCATACCTCTAC+CGG - chr7_1:23554859-23554878 Msa1014530:intron 35.0%
GGTAACACATATTTCAAGCA+CGG - chr7_1:23553309-23553328 Msa1014530:intron 35.0%
GTAACACATATTTCAAGCAC+GGG - chr7_1:23554961-23554980 Msa1014530:intron 35.0%
TATGAAGCACATACACTTCT+AGG + chr7_1:23551583-23551602 None:intergenic 35.0%
AAGTGTATGTGCTTCATAGA+AGG - chr7_1:23554594-23554613 Msa1014530:intron 35.0%
! ACACGGGCGAAAATTTTTAT+GGG + chr7_1:23556746-23556765 None:intergenic 35.0%
! TACACGGGCGAAAATTTTTA+TGG + chr7_1:23556747-23556766 None:intergenic 35.0%
AAACTGTTGTAACACGTACT+TGG + chr7_1:23556885-23556904 None:intergenic 35.0%
CACGTCTACATGTAAACATT+AGG - chr7_1:23556967-23556986 Msa1014530:intron 35.0%
CGTCTACATGTAAACATTAG+GGG - chr7_1:23556969-23556988 Msa1014530:intron 35.0%
AATCAATTGCGGCCATATTA+TGG - chr7_1:23557003-23557022 Msa1014530:intron 35.0%
TATGAAGCACAAACACTTCT+AGG + chr7_1:23557529-23557548 None:intergenic 35.0%
AAGTGTTTGTGCTTCATAGA+TGG - chr7_1:23557531-23557550 Msa1014530:intron 35.0%
!! AAAATTTGGGAGTGTCACAA+CGG - chr7_1:23551722-23551741 Msa1014530:intron 35.0%
!! AAAGTGTTGTAACACGTACT+TGG + chr7_1:23550388-23550407 None:intergenic 35.0%
TACGTCTACCAGTAAACATT+AGG - chr7_1:23557923-23557942 Msa1014530:intron 35.0%
ACGTCTACCAGTAAACATTA+GGG - chr7_1:23557924-23557943 Msa1014530:intron 35.0%
ATAACATGGCCGAAATTCAT+TGG + chr7_1:23557960-23557979 None:intergenic 35.0%
AATGAATTTCGGCCATGTTA+TGG - chr7_1:23557959-23557978 Msa1014530:intron 35.0%
AAGTCACATGATTTCTCAAG+AGG + chr7_1:23558069-23558088 None:intergenic 35.0%
CATGTTGTCCCATTATACAA+AGG + chr7_1:23558126-23558145 None:intergenic 35.0%
GACAACATGTAATGAGATCA+GGG - chr7_1:23558137-23558156 Msa1014530:CDS 35.0%
AGTCAGAATTGCATTGTCAA+TGG - chr7_1:23558162-23558181 Msa1014530:intron 35.0%
TTGGTTTCCATCTCCAATAT+AGG + chr7_1:23558206-23558225 None:intergenic 35.0%
! ATCAATCATATAGGCTCTGA+TGG - chr7_1:23558372-23558391 Msa1014530:intron 35.0%
! TCAATCATATAGGCTCTGAT+GGG - chr7_1:23558373-23558392 Msa1014530:intron 35.0%
ATGCAAACTTGACATCCTAT+TGG - chr7_1:23558418-23558437 Msa1014530:intron 35.0%
TGCAAACTTGACATCCTATT+GGG - chr7_1:23558419-23558438 Msa1014530:intron 35.0%
GTGATCAAAGAAGAAAGGAA+GGG - chr7_1:23558460-23558479 Msa1014530:intron 35.0%
TGGATCATGTAAATGAGAAG+TGG - chr7_1:23558505-23558524 Msa1014530:intron 35.0%
GGATCATGTAAATGAGAAGT+GGG - chr7_1:23558506-23558525 Msa1014530:intron 35.0%
GGCAAGTCATATAGATCAAA+TGG - chr7_1:23558527-23558546 Msa1014530:intron 35.0%
!!! GTCATTTGGTCATTGGTTTT+TGG - chr7_1:23558563-23558582 Msa1014530:intron 35.0%
TTCCAATGAGAAAGGCTTTA+AGG - chr7_1:23558679-23558698 Msa1014530:intron 35.0%
ATCCTTAAAGCCTTTCTCAT+TGG + chr7_1:23558684-23558703 None:intergenic 35.0%
!!! TACTCATTTTGAAGGTGCTT+GGG - chr7_1:23558779-23558798 Msa1014530:intron 35.0%
GAAAAAGCCATATCGATATG+AGG - chr7_1:23558824-23558843 Msa1014530:intron 35.0%
TTCTTCTCCTCATATCGATA+TGG + chr7_1:23558834-23558853 None:intergenic 35.0%
TATGAGGAGAAGAAACTTGA+AGG - chr7_1:23558840-23558859 Msa1014530:intron 35.0%
GGAAGCTAAGATAAGAAGTA+TGG - chr7_1:23558866-23558885 Msa1014530:intron 35.0%
TACAAAACGATTGTACCCAT+TGG - chr7_1:23559045-23559064 Msa1014530:intron 35.0%
!! TTTTGGAGATGATGAAGAAG+GGG - chr7_1:23559105-23559124 Msa1014530:intron 35.0%
! TGCTTACAATTTGGAACAGA+AGG - chr7_1:23559495-23559514 Msa1014530:intron 35.0%
TCGTGTGTTAAATTTGATCG+AGG - chr7_1:23559645-23559664 Msa1014530:intron 35.0%
CTCTTTGGTGAAGTTTCCAT+CGG + chr7_1:23548734-23548753 None:intergenic 40.0%
GAAGCGCGGACTTAATATAT+AGG + chr7_1:23549003-23549022 None:intergenic 40.0%
!! GCAATGATTAACTCTGAGGT+GGG + chr7_1:23549644-23549663 None:intergenic 40.0%
ATGACCAAAATGCCCTTAGT+TGG - chr7_1:23549677-23549696 Msa1014530:CDS 40.0%
!!! TTGACCAACTAAGGGCATTT+TGG + chr7_1:23549684-23549703 None:intergenic 40.0%
!!! GTTGATGAAGGAGGGTATTT+TGG + chr7_1:23549723-23549742 None:intergenic 40.0%
ATACCCTCCTTCATCAACTA+AGG - chr7_1:23549725-23549744 Msa1014530:CDS 40.0%
TACCCTCCTTCATCAACTAA+GGG - chr7_1:23549726-23549745 Msa1014530:CDS 40.0%
! TTCCGTGAAGTTTTTACCTG+GGG + chr7_1:23550359-23550378 None:intergenic 40.0%
! GTTCCGTGAAGTTTTTACCT+GGG + chr7_1:23550360-23550379 None:intergenic 40.0%
! TGTTCCGTGAAGTTTTTACC+TGG + chr7_1:23550361-23550380 None:intergenic 40.0%
AGGTAAAAACTTCACGGAAC+AGG - chr7_1:23550360-23550379 Msa1014530:CDS 40.0%
TCTCCCATAAAAGTTGTCTC+CGG - chr7_1:23550967-23550986 Msa1014530:intron 40.0%
CTCTTTCGTGAAGTTTCCAT+CGG + chr7_1:23551080-23551099 None:intergenic 40.0%
ACTCTTGAATCTACTGTGTG+TGG - chr7_1:23551393-23551412 Msa1014530:intron 40.0%
!! CGTGTCGTAAAAAGTGTCAT+AGG - chr7_1:23551541-23551560 Msa1014530:intron 40.0%
AGCACATACACTTCTAGGTT+CGG + chr7_1:23551578-23551597 None:intergenic 40.0%
GATCAACATCATACCTCTAC+CGG - chr7_1:23551848-23551867 Msa1014530:intron 40.0%
TTTCGTGAAGTTTCCACCAA+AGG + chr7_1:23552568-23552587 None:intergenic 40.0%
CTCTACCAGTGGAAACTTTA+CGG - chr7_1:23553222-23553241 Msa1014530:intron 40.0%
TTTCGTGAAGTTTCCTCCAA+AGG + chr7_1:23553932-23553951 None:intergenic 40.0%
TGTCAGAGTTCGTACATCAT+AGG + chr7_1:23554108-23554127 None:intergenic 40.0%
GAGGAATGTTTATCAACGAG+GGG + chr7_1:23554372-23554391 None:intergenic 40.0%
GTGAGGAATGTTTATCAACG+AGG + chr7_1:23554374-23554393 None:intergenic 40.0%
TCAAGAGTTAATGCCTTGTG+AGG + chr7_1:23554391-23554410 None:intergenic 40.0%
GGACAACTCAAACAAATGTC+TGG + chr7_1:23551435-23551454 None:intergenic 40.0%
CTGTGTCTGACACTTATATG+AGG + chr7_1:23554475-23554494 None:intergenic 40.0%
ACATGTCGTACAAGTGTCAA+AGG - chr7_1:23554550-23554569 Msa1014530:CDS 40.0%
TTTCGTGAAGTTTCCTCCAA+TGG + chr7_1:23553932-23553951 None:intergenic 40.0%
GACACTTATATGAGGTGTGT+AGG + chr7_1:23555723-23555742 None:intergenic 40.0%
AGCACATACACTTCTAGGTA+CGG + chr7_1:23554587-23554606 None:intergenic 40.0%
GATCAACATCATACCTCTAC+CGG - chr7_1:23551848-23551867 Msa1014530:intron 40.0%
GGTAACACGTATTTCATGCA+CGG - chr7_1:23556215-23556234 Msa1014530:intron 40.0%
GTAACACGTATTTCATGCAC+GGG - chr7_1:23556216-23556235 Msa1014530:intron 40.0%
TTTCGTGAAGTTTCCACTAG+AGG + chr7_1:23556856-23556875 None:intergenic 40.0%
TAGTGGAAACTTCACGAAAG+AGG - chr7_1:23556857-23556876 Msa1014530:intron 40.0%
TGTCAGAGTTCGTACATCAT+AGG + chr7_1:23554108-23554127 None:intergenic 40.0%
ATGATGTACGAACTCTGACA+TGG - chr7_1:23554108-23554127 Msa1014530:intron 40.0%
TGAGAAACGTTGATCAACGA+GGG + chr7_1:23557289-23557308 None:intergenic 40.0%
GTTGATCAACGTTTCTCACA+AGG - chr7_1:23557291-23557310 Msa1014530:intron 40.0%
ACTCTTGAATCTACTGTGTG+TGG - chr7_1:23551393-23551412 Msa1014530:intron 40.0%
AGCACAAACACTTCTAGGTT+TGG + chr7_1:23557524-23557543 None:intergenic 40.0%
CGTCTACCAGTAAACATTAG+GGG - chr7_1:23557925-23557944 Msa1014530:intron 40.0%
TTACGTCCCCTAATGTTTAC+TGG + chr7_1:23557934-23557953 None:intergenic 40.0%
AATTGGGTTCATGACAAGAG+AGG - chr7_1:23558099-23558118 Msa1014530:intron 40.0%
AAGAGAGGCCCTTTGTATAA+TGG - chr7_1:23558114-23558133 Msa1014530:CDS 40.0%
AGAGAGGCCCTTTGTATAAT+GGG - chr7_1:23558115-23558134 Msa1014530:CDS 40.0%
GGACAACATGTAATGAGATC+AGG - chr7_1:23558136-23558155 Msa1014530:CDS 40.0%
TTGCATTGTCAATGGAAGAC+CGG - chr7_1:23558170-23558189 Msa1014530:intron 40.0%
CAATATAGGTAGCTTGAGTC+CGG + chr7_1:23558192-23558211 None:intergenic 40.0%
CAAGCTACCTATATTGGAGA+TGG - chr7_1:23558196-23558215 Msa1014530:intron 40.0%
ACTGGAAGATCACACTCATT+TGG + chr7_1:23558225-23558244 None:intergenic 40.0%
TTGTTGGAGACTCTTTAGCT+AGG - chr7_1:23558295-23558314 Msa1014530:intron 40.0%
AGCAAATAAGGGACTCTAGT+TGG + chr7_1:23558323-23558342 None:intergenic 40.0%
GTCAAGTTTGCATTGTGAGA+AGG + chr7_1:23558411-23558430 None:intergenic 40.0%
TGATCACCCTTCACAAGAAA+CGG + chr7_1:23558447-23558466 None:intergenic 40.0%
GAAGGGTGATCAAAGAAGAA+AGG - chr7_1:23558455-23558474 Msa1014530:intron 40.0%
GGTGATCAAAGAAGAAAGGA+AGG - chr7_1:23558459-23558478 Msa1014530:intron 40.0%
CAAGCACCTTCAAAATGAGT+AGG + chr7_1:23558780-23558799 None:intergenic 40.0%
!!! CTACTCATTTTGAAGGTGCT+TGG - chr7_1:23558778-23558797 Msa1014530:intron 40.0%
!!! TTTTGAAGGTGCTTGGGATA+AGG - chr7_1:23558785-23558804 Msa1014530:intron 40.0%
!! TTTGAAGGTGCTTGGGATAA+GGG - chr7_1:23558786-23558805 Msa1014530:intron 40.0%
GGAGAAGAAACTTGAAGGAA+TGG - chr7_1:23558845-23558864 Msa1014530:intron 40.0%
AGAGGAAGCTGAAAATGCTA+AGG - chr7_1:23558893-23558912 Msa1014530:intron 40.0%
TTCCAAGTATCAATAGGTCC+TGG + chr7_1:23559077-23559096 None:intergenic 40.0%
TTCCTCCGTCCTAAAATGTA+AGG - chr7_1:23559163-23559182 Msa1014530:intron 40.0%
!!! TTCCTTACATTTTAGGACGG+AGG + chr7_1:23559168-23559187 None:intergenic 40.0%
GTTCGAGCTTGTGGTTTATT+GGG - chr7_1:23559734-23559753 Msa1014530:CDS 40.0%
TTTGGTGAAGTTTCCATCGG+AGG + chr7_1:23548731-23548750 None:intergenic 45.0%
CGATGGAAACTTCACCAAAG+AGG - chr7_1:23548732-23548751 Msa1014530:three_prime_UTR 45.0%
GTGTATGTTAGTGTTGCGTC+AGG + chr7_1:23548934-23548953 None:intergenic 45.0%
TTCTGTGAAGTTTCCACCAG+AGG + chr7_1:23549292-23549311 None:intergenic 45.0%
TGGTGGAAACTTCACAGAAG+AGG - chr7_1:23549293-23549312 Msa1014530:three_prime_UTR 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG + chr7_1:23549833-23549852 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG + chr7_1:23549832-23549851 None:intergenic 45.0%
! TTTTACAGGGGCAAAATGGG+AGG + chr7_1:23549817-23549836 None:intergenic 45.0%
! GGCAATGATTAACTCTGAGG+TGG + chr7_1:23549645-23549664 None:intergenic 45.0%
CGTGGCAATGATTAACTCTG+AGG + chr7_1:23549648-23549667 None:intergenic 45.0%
!! TTTGGTCATTTTGCGTGACG+TGG + chr7_1:23549666-23549685 None:intergenic 45.0%
!! TGCCCTTAGTTGATGAAGGA+GGG + chr7_1:23549731-23549750 None:intergenic 45.0%
!! ATGCCCTTAGTTGATGAAGG+AGG + chr7_1:23549732-23549751 None:intergenic 45.0%
! TTTTACAGGGGCAAAATGGG+AGG - chr7_1:23549817-23549836 Msa1014530:CDS 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG - chr7_1:23549832-23549851 Msa1014530:CDS 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG - chr7_1:23549833-23549852 Msa1014530:CDS 45.0%
CTCCCCAGGTAAAAACTTCA+CGG - chr7_1:23550354-23550373 Msa1014530:CDS 45.0%
TTTCGTGAAGTTTCCATCGG+AGG + chr7_1:23551077-23551096 None:intergenic 45.0%
CGATGGAAACTTCACGAAAG+AGG - chr7_1:23551078-23551097 Msa1014530:intron 45.0%
TTCTTTACTCCGACAGTCCT+AGG + chr7_1:23551489-23551508 None:intergenic 45.0%
CTCTACCGGTGGAAACTTTA+CGG - chr7_1:23551862-23551881 Msa1014530:intron 45.0%
CTCTACCGTAAAGTTTCCAC+CGG + chr7_1:23551870-23551889 None:intergenic 45.0%
TGGTGGAAACTTCACGAAAG+AGG - chr7_1:23552569-23552588 Msa1014530:intron 45.0%
CAACATCATACCTCTACCAG+TGG - chr7_1:23553211-23553230 Msa1014530:intron 45.0%
CGTAAAGTTTCCACTGGTAG+AGG + chr7_1:23553224-23553243 None:intergenic 45.0%
CTCTTCCGTAAAGTTTCCAC+TGG + chr7_1:23553230-23553249 None:intergenic 45.0%
TGGAGGAAACTTCACGAAAG+AGG - chr7_1:23553933-23553952 Msa1014530:intron 45.0%
GACACTTATATGAGGTGCGT+CGG + chr7_1:23554467-23554486 None:intergenic 45.0%
AAGTGTCAGACACAGAACCT+AGG - chr7_1:23554480-23554499 Msa1014530:intron 45.0%
GACACTTGTACGACATGTGT+CGG + chr7_1:23554548-23554567 None:intergenic 45.0%
CTCTACCGGTGGAAACTTTA+CGG - chr7_1:23551862-23551881 Msa1014530:intron 45.0%
CTCTTCCGTAAAGTTTCCAC+CGG + chr7_1:23553230-23553249 None:intergenic 45.0%
GGACAACTCAAACAGATGTC+TGG + chr7_1:23555702-23555721 None:intergenic 45.0%
CGGTGTCTGACACTTATATG+AGG + chr7_1:23555731-23555750 None:intergenic 45.0%
ACGTGTCGTACAAGTGTCAT+TGG - chr7_1:23555806-23555825 Msa1014530:intron 45.0%
CTCTACCGGTGGAAACTTTA+CGG - chr7_1:23551862-23551881 Msa1014530:intron 45.0%
CTCTTCCGTAAAGTTTCCAC+CGG + chr7_1:23553230-23553249 None:intergenic 45.0%
GAGAAACGTTGATCAACGAG+GGG + chr7_1:23557288-23557307 None:intergenic 45.0%
GTGAGAAACGTTGATCAACG+AGG + chr7_1:23557290-23557309 None:intergenic 45.0%
AAGTGTCAGACACTGAACCT+AGG - chr7_1:23557406-23557425 Msa1014530:intron 45.0%
AACACTCGTAAGACACGTGT+CGG + chr7_1:23557475-23557494 None:intergenic 45.0%
CTCTTTCGTGAAGTTTCCAC+CGG + chr7_1:23552571-23552590 None:intergenic 45.0%
CGGACTCAAGCTACCTATAT+TGG - chr7_1:23558190-23558209 Msa1014530:intron 45.0%
! ATCATATAGGCTCTGATGGG+AGG - chr7_1:23558376-23558395 Msa1014530:intron 45.0%
TTGGCATTGTTGAGACCAGA+TGG - chr7_1:23558966-23558985 Msa1014530:intron 45.0%
ATGGTCATGCAGGAGCTTAT+AGG - chr7_1:23558985-23559004 Msa1014530:intron 45.0%
TGCCAGGACCTATTGATACT+TGG - chr7_1:23559072-23559091 Msa1014530:intron 45.0%
GGTTCGAGCTTGTGGTTTAT+TGG - chr7_1:23559733-23559752 Msa1014530:CDS 45.0%
AGCTTGTGGTTTATTGGGTC+AGG - chr7_1:23559739-23559758 Msa1014530:CDS 45.0%
!!! ATAATAGTTATTTTAAAATA+GGG - chr7_1:23549510-23549529 Msa1014530:CDS 5.0%
!! AGAAAAATAAATTAATATAT+TGG + chr7_1:23551184-23551203 None:intergenic 5.0%
!! TATTAAAAAAAAATATTGAA+TGG - chr7_1:23552522-23552541 Msa1014530:intron 5.0%
!! AGATAAATAAATTATTATAT+AGG + chr7_1:23552815-23552834 None:intergenic 5.0%
!!! AATTAATTTTAATCATATTA+CGG - chr7_1:23553288-23553307 Msa1014530:intron 5.0%
!! TATTAAAATAAAATAGTTAA+TGG - chr7_1:23553886-23553905 Msa1014530:intron 5.0%
!! AGATAAATAAATTATTATAT+AGG + chr7_1:23552815-23552834 None:intergenic 5.0%
!! ATTATTAAATAAAAATTCAA+TGG - chr7_1:23555539-23555558 Msa1014530:intron 5.0%
!! ATTATTAATGAAATATTAAT+TGG - chr7_1:23556087-23556106 Msa1014530:intron 5.0%
!! TTATTAAAAAAAATATTGAA+TGG - chr7_1:23556810-23556829 Msa1014530:intron 5.0%
!! TAAAAAAAAAAAGATTAAAT+AGG + chr7_1:23559250-23559269 None:intergenic 5.0%
!!! TTTTAATTTTCTTAATAAAT+GGG - chr7_1:23559457-23559476 Msa1014530:intron 5.0%
CAACGGTAAGAGATCCTCTC+CGG - chr7_1:23549163-23549182 Msa1014530:three_prime_UTR 50.0%
TGTGAAGTTTCCACCAGAGG+AGG + chr7_1:23549289-23549308 None:intergenic 50.0%
! CGTGAAGTTTTTACCTGGGG+AGG + chr7_1:23550356-23550375 None:intergenic 50.0%
ACGGGTAGTACCCATTGTTG+TGG - chr7_1:23550460-23550479 Msa1014530:intron 50.0%
AGTTTCCATCGGAGGAAGTC+TGG + chr7_1:23551069-23551088 None:intergenic 50.0%
ATGTGTCAGACACCGAACCT+AGG - chr7_1:23551469-23551488 Msa1014530:intron 50.0%
TACTCCGACAGTCCTAGGTT+CGG + chr7_1:23551484-23551503 None:intergenic 50.0%
CAACATCATACCTCTACCGG+TGG - chr7_1:23551851-23551870 Msa1014530:intron 50.0%
CGTAAAGTTTCCACCGGTAG+AGG + chr7_1:23551864-23551883 None:intergenic 50.0%
AGCACGGATACTCATCGTTG+TGG - chr7_1:23551965-23551984 Msa1014530:intron 50.0%
CGTGAAGTTTCCACCAAAGG+AGG + chr7_1:23552565-23552584 None:intergenic 50.0%
GATGGGCATCAAACCTCCTT+TGG - chr7_1:23553913-23553932 Msa1014530:intron 50.0%
CGTGAAGTTTCCTCCAAAGG+AGG + chr7_1:23553929-23553948 None:intergenic 50.0%
CAACATCATACCTCTACCGG+TGG - chr7_1:23551851-23551870 Msa1014530:intron 50.0%
CGTAAAGTTTCCACCGGTAG+AGG + chr7_1:23551864-23551883 None:intergenic 50.0%
CGTGAAGTTTCCTCCAATGG+AGG + chr7_1:23555582-23555601 None:intergenic 50.0%
AAGTGTCAGACACCGAACCA+AGG - chr7_1:23555736-23555755 Msa1014530:intron 50.0%
CAACATCATACCTCTACCGG+TGG - chr7_1:23551851-23551870 Msa1014530:intron 50.0%
CGTAAAGTTTCCACCGGTAG+AGG + chr7_1:23551864-23551883 None:intergenic 50.0%
CGTGAAGTTTCCACTAGAGG+AGG + chr7_1:23556853-23556872 None:intergenic 50.0%
TTTCGTGAAGTTTCCACCGG+AGG + chr7_1:23557814-23557833 None:intergenic 50.0%
CGGTGGAAACTTCACGAAAG+AGG - chr7_1:23557815-23557834 Msa1014530:intron 50.0%
! ATATAGGCTCTGATGGGAGG+TGG - chr7_1:23558379-23558398 Msa1014530:intron 50.0%
CACAAGAAACGGTGCCCAAT+AGG + chr7_1:23558436-23558455 None:intergenic 50.0%
! TTGGGCACCGTTTCTTGTGA+AGG - chr7_1:23558437-23558456 Msa1014530:intron 50.0%
! TGGGCACCGTTTCTTGTGAA+GGG - chr7_1:23558438-23558457 Msa1014530:intron 50.0%
TTGAGACCAGATGGTCATGC+AGG - chr7_1:23558975-23558994 Msa1014530:intron 50.0%
TAAGCTCCTGCATGACCATC+TGG + chr7_1:23558984-23559003 None:intergenic 50.0%
CCACAAGCTCGAACCCAAAT+AGG + chr7_1:23559728-23559747 None:intergenic 50.0%
! CCTATTTGGGTTCGAGCTTG+TGG - chr7_1:23559725-23559744 Msa1014530:intron 50.0%
GGTGAAGTTTCCATCGGAGG+AGG + chr7_1:23548728-23548747 None:intergenic 55.0%
GTTGCGTCAGGTGTCCATGA+TGG + chr7_1:23548922-23548941 None:intergenic 55.0%
GATGGGCATCATACCTCCTC+TGG - chr7_1:23549273-23549292 Msa1014530:three_prime_UTR 55.0%
AGCACGGGTAGTCGTTGTTG+TGG - chr7_1:23549390-23549409 Msa1014530:CDS 55.0%
GATGGACATCATACCTCCCC+AGG - chr7_1:23550340-23550359 Msa1014530:CDS 55.0%
GACACCGAACCTAGGACTGT+CGG - chr7_1:23551477-23551496 Msa1014530:intron 55.0%
GATGAGCGTCAGACCTCCTT+TGG - chr7_1:23552549-23552568 Msa1014530:intron 55.0%
! GCATGGGGTATCCGTTGTTG+TGG - chr7_1:23553326-23553345 Msa1014530:intron 55.0%
GGGCATCAAACCTCCTTTGG+AGG - chr7_1:23553916-23553935 Msa1014530:intron 55.0%
CTTCTAGGTTTGGCGTGTCG+CGG + chr7_1:23557514-23557533 None:intergenic 55.0%
GATGAGCATCAGACCACCTC+CGG - chr7_1:23557795-23557814 Msa1014530:intron 55.0%
!! GAAGGTGCTTGGGATAAGGG+TGG - chr7_1:23558789-23558808 Msa1014530:intron 55.0%
! TGTACCCATTGGTGCTTGCC+AGG - chr7_1:23559056-23559075 Msa1014530:intron 55.0%
AGGTCCTGGCAAGCACCAAT+GGG + chr7_1:23559063-23559082 None:intergenic 55.0%
TAGGTCCTGGCAAGCACCAA+TGG + chr7_1:23559064-23559083 None:intergenic 55.0%
GGGCATCATACCTCCTCTGG+TGG - chr7_1:23549276-23549295 Msa1014530:three_prime_UTR 60.0%
GAGCGTCAGACCTCCTTTGG+TGG - chr7_1:23552552-23552571 Msa1014530:intron 60.0%
AGCACGGGTACCCGTTGTTG+TGG - chr7_1:23554976-23554995 Msa1014530:intron 60.0%
GATGGGCGTCAGACCTCCAT+TGG - chr7_1:23555566-23555585 Msa1014530:intron 60.0%
TGCACGGGTACCCGTTGTTG+TGG - chr7_1:23556231-23556250 Msa1014530:intron 60.0%
TGGCGTCAGACCTCCTCTAG+TGG - chr7_1:23556840-23556859 Msa1014530:intron 60.0%
CGTGAAGTTTCCACCGGAGG+TGG + chr7_1:23557811-23557830 None:intergenic 60.0%
GGGTGCCAGACTTCCTCCGA+TGG - chr7_1:23551061-23551080 Msa1014530:intron 65.0%
GGGCGTCAGACCTCCATTGG+AGG - chr7_1:23555569-23555588 Msa1014530:intron 65.0%
GAGCATCAGACCACCTCCGG+TGG - chr7_1:23557798-23557817 Msa1014530:intron 65.0%
!! GGGCATCGGACCTCCTCCGA+TGG - chr7_1:23548715-23548734 Msa1014530:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 23548713 23559775 23548713 ID=Msa1014530;Name=Msa1014530
chr7_1 mRNA 23548713 23559775 23548713 ID=Msa1014530-mRNA-1;Parent=Msa1014530;Name=Msa1014530-mRNA-1;_AED=0.23;_eAED=0.25;_QI=0|0.76|0.71|0.92|1|1|14|636|642
chr7_1 exon 23548713 23550433 23548713 ID=Msa1014530-mRNA-1:exon:5453;Parent=Msa1014530-mRNA-1
chr7_1 exon 23550645 23550725 23550645 ID=Msa1014530-mRNA-1:exon:5452;Parent=Msa1014530-mRNA-1
chr7_1 exon 23551603 23551650 23551603 ID=Msa1014530-mRNA-1:exon:5451;Parent=Msa1014530-mRNA-1
chr7_1 exon 23552326 23552406 23552326 ID=Msa1014530-mRNA-1:exon:5450;Parent=Msa1014530-mRNA-1
chr7_1 exon 23552874 23552921 23552874 ID=Msa1014530-mRNA-1:exon:5449;Parent=Msa1014530-mRNA-1
chr7_1 exon 23553581 23553661 23553581 ID=Msa1014530-mRNA-1:exon:5448;Parent=Msa1014530-mRNA-1
chr7_1 exon 23554527 23554574 23554527 ID=Msa1014530-mRNA-1:exon:5447;Parent=Msa1014530-mRNA-1
chr7_1 exon 23555232 23555312 23555232 ID=Msa1014530-mRNA-1:exon:5446;Parent=Msa1014530-mRNA-1
chr7_1 exon 23555891 23555938 23555891 ID=Msa1014530-mRNA-1:exon:5445;Parent=Msa1014530-mRNA-1
chr7_1 exon 23556592 23556672 23556592 ID=Msa1014530-mRNA-1:exon:5444;Parent=Msa1014530-mRNA-1
chr7_1 exon 23558100 23558180 23558100 ID=Msa1014530-mRNA-1:exon:5443;Parent=Msa1014530-mRNA-1
chr7_1 exon 23559167 23559247 23559167 ID=Msa1014530-mRNA-1:exon:5442;Parent=Msa1014530-mRNA-1
chr7_1 exon 23559321 23559357 23559321 ID=Msa1014530-mRNA-1:exon:5441;Parent=Msa1014530-mRNA-1
chr7_1 exon 23559728 23559775 23559728 ID=Msa1014530-mRNA-1:exon:5440;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23559728 23559775 23559728 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23559321 23559357 23559321 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23559167 23559247 23559167 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23558100 23558180 23558100 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23556592 23556672 23556592 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23555891 23555938 23555891 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23555232 23555312 23555232 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23554527 23554574 23554527 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23553581 23553661 23553581 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23552874 23552921 23552874 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23552326 23552406 23552326 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23551603 23551650 23551603 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23550645 23550725 23550645 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 CDS 23549349 23550433 23549349 ID=Msa1014530-mRNA-1:cds;Parent=Msa1014530-mRNA-1
chr7_1 three_prime_UTR 23548713 23549348 23548713 ID=Msa1014530-mRNA-1:three_prime_utr;Parent=Msa1014530-mRNA-1
Gene Sequence

>Msa1014530

ATGGGCATCGGACCTCCTCCGATGGAAACTTCACCAAAGAGGATCTATATACTTTATAGGAAGCAAATTTCTGAGTGTCACAACGTTTCAATTATTAATGAAAAATTGAATGGTGGAGATGGGCATCATACCTCCTCTGGTGGAAACTTCACAGAAGAGGATCCAATTTCAATTATTAATGAAAAATTGAATGGTGGAGATGGACATCATACCTCCCCAGGTAAAAACTTCACGGAACAGGATCCAATTTCAATTATTAATGAAATATTGAATGGTGGAGATCAACATCATACCTCTACCGGTGGAAACTTTACGGTAGAGAATCCAAATGAGCGTCAGACCTCCTTTGGTGGAAACTTCACGAAAGAGGATCCAATTTCAATTATTAATGAAATATTGAATGGTGGAGATCAACATCATACCTCTACCAGTGGAAACTTTACGGAAGAGAATACAAATGGGCATCAAACCTCCTTTGGAGGAAACTTCACGAAAGAGGATCCAATTTCAATTATTAATGAAATATTGAATGGTGGATATCAACATCATACCTCTACCGGTGGAAACTTTACGGAAGAGAATCCAAATGGGCGTCAGACCTCCATTGGAGGAAACTTCACGAAAGAAGATCCAATTTCAATTATTAATGAAATATTAATTGGTGGAGATCAACATCATACCTCTACCGGTGGAAACTTTACGGAAGAGAATCCAAATTGGCGTCAGACCTCCTCTAGTGGAAACTTCACGAAAGAGGATCCAATTTCAATTATTAATGAAAAATTGAATGGTGGAGATGAGCATCAGACCACCTCCGGTGGAAACTTCACGAAAGAGGATCCAAAAAAGGAAAAACCTCTTGAGAAATCATGTGACTTTTTAATTGGCAATTGGGTTCATGACAAGAGAGGCCCTTTGTATAATGGGACAACATGTAATGAGATCAGGGAAAGTCAGAATTGCATTGTCAATGGAAGACCGGACTCAAGCTACCTATATTGGAGATGGAAACCAAATGAGTGTGATCTTCCAGTTTTTGAACCAAACACTTTTCTTAAACTCATGAGCAACATGAACATAGTTTTTGTTGGAGACTCTTTAGCTAGGAACCAACTAGAGTCCCTTATTTGCTTATTATCCACTGCTTCAAAACCTATATATATCAATCATATAGGCTCTGATGGGAGGTGGTATTTTCCTTCTCACAATGCAAACTTGACATCCTATTGGGCACCGTTTCTTGTGAAGGGTGATCAAAGAAGAAAGGAAGGGCCACACCATAATACAATACATTTGGATCATGTAAATGAGAAGTGGGCAAGTCATATAGATCAAATGGACTTGATTATGTTGTCATTTGGTCATTGGTTTTTGGACATTCCTTCAATTTACTATGAGAATGATTCAGTTATAGGTTGTTCAGTATGTCATGATTTTAAATCGAAATATAATGATATTGGATTTTATGTTCCAATGAGAAAGGCTTTAAGGATTGCCCTTAATACCATAATTGAGAGGAAAATGGTTAAAGGGAATGAAATTGATGTGATTGTGAGAACATTTTCACCTACTCATTTTGAAGGTGCTTGGGATAAGGGTGGTACTTGTTCAAAGAAAAAGCCATATCGATATGAGGAGAAGAAACTTGAAGGAATGGAAGCTAAGATAAGAAGTATGGAAATAGAGGAAGCTGAAAATGCTAAGGAAAAATCTAAACAAATTGGATTAAATTTGAAGGTGCTTGATATAACAAAATTGGCATTGTTGAGACCAGATGGTCATGCAGGAGCTTATAGGTTTCCTTTTCCATTTGCTAAAAAAGTTCCAAAGTATGTACAAAACGATTGTACCCATTGGTGCTTGCCAGGACCTATTGATACTTGGAATGAGATTTTTTTGGAGATGATGAAGAAGGGGAAGAACTATTAG
Protein sequence

>Msa1014530

MGIGPPPMETSPKRIYILYRKQISECHNVSIINEKLNGGDGHHTSSGGNFTEEDPISIINEKLNGGDGHHTSPGKNFTEQDPISIINEILNGGDQHHTSTGGNFTVENPNERQTSFGGNFTKEDPISIINEILNGGDQHHTSTSGNFTEENTNGHQTSFGGNFTKEDPISIINEILNGGYQHHTSTGGNFTEENPNGRQTSIGGNFTKEDPISIINEILIGGDQHHTSTGGNFTEENPNWRQTSSSGNFTKEDPISIINEKLNGGDEHQTTSGGNFTKEDPKKEKPLEKSCDFLIGNWVHDKRGPLYNGTTCNEIRESQNCIVNGRPDSSYLYWRWKPNECDLPVFEPNTFLKLMSNMNIVFVGDSLARNQLESLICLLSTASKPIYINHIGSDGRWYFPSHNANLTSYWAPFLVKGDQRRKEGPHHNTIHLDHVNEKWASHIDQMDLIMLSFGHWFLDIPSIYYENDSVIGCSVCHDFKSKYNDIGFYVPMRKALRIALNTIIERKMVKGNEIDVIVRTFSPTHFEGAWDKGGTCSKKKPYRYEEKKLEGMEAKIRSMEIEEAENAKEKSKQIGLNLKVLDITKLALLRPDGHAGAYRFPFPFAKKVPKYVQNDCTHWCLPGPIDTWNEIFLEMMKKGKNY*