Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396790 | XP_003598672.1 | 93.194 | 191 | 13 | 0 | 1 | 191 | 1 | 191 | 1.48e-129 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396790 | sp|Q9LK88|NQR_ARATH | 68.984 | 187 | 58 | 0 | 4 | 190 | 10 | 196 | 7.78e-91 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396790 | G7IW34 | 93.194 | 191 | 13 | 0 | 1 | 191 | 1 | 191 | 7.09e-130 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0396790 | 0.859966 | 2.868675e-63 | -8.615850e-47 |
| Msa0011010 | Msa0396790 | 0.803650 | 3.150053e-49 | -8.615850e-47 |
| Msa0011040 | Msa0396790 | 0.806919 | 6.511324e-50 | -8.615850e-47 |
| Msa0014590 | Msa0396790 | 0.819149 | 1.351386e-52 | -8.615850e-47 |
| Msa0017350 | Msa0396790 | 0.800238 | 1.582901e-48 | -8.615850e-47 |
| Msa0019570 | Msa0396790 | 0.811637 | 6.336681e-51 | -8.615850e-47 |
| Msa0024650 | Msa0396790 | 0.806063 | 9.864612e-50 | -8.615850e-47 |
| Msa0027860 | Msa0396790 | 0.832183 | 1.093097e-55 | -8.615850e-47 |
| Msa0046390 | Msa0396790 | 0.801569 | 8.464069e-49 | -8.615850e-47 |
| Msa0048380 | Msa0396790 | 0.809540 | 1.799535e-50 | -8.615850e-47 |
| Msa0059880 | Msa0396790 | 0.847154 | 1.383728e-59 | -8.615850e-47 |
| Msa0063540 | Msa0396790 | 0.809809 | 1.575014e-50 | -8.615850e-47 |
| Msa0074620 | Msa0396790 | 0.814015 | 1.910252e-51 | -8.615850e-47 |
| Msa0080010 | Msa0396790 | 0.806113 | 9.632242e-50 | -8.615850e-47 |
| Msa0085110 | Msa0396790 | 0.806505 | 7.962320e-50 | -8.615850e-47 |
| Msa0087900 | Msa0396790 | 0.801181 | 1.016447e-48 | -8.615850e-47 |
| Msa0095910 | Msa0396790 | 0.823007 | 1.745828e-53 | -8.615850e-47 |
| Msa0104770 | Msa0396790 | 0.801963 | 7.026526e-49 | -8.615850e-47 |
| Msa0107830 | Msa0396790 | 0.811384 | 7.191899e-51 | -8.615850e-47 |
| Msa0120450 | Msa0396790 | 0.817639 | 2.970772e-52 | -8.615850e-47 |
| Msa0121320 | Msa0396790 | 0.803663 | 3.130352e-49 | -8.615850e-47 |
| Msa0123530 | Msa0396790 | 0.817351 | 3.450215e-52 | -8.615850e-47 |
| Msa0134570 | Msa0396790 | 0.811384 | 7.192846e-51 | -8.615850e-47 |
| Msa0135330 | Msa0396790 | 0.803326 | 3.677278e-49 | -8.615850e-47 |
| Msa0150910 | Msa0396790 | 0.859496 | 3.972706e-63 | -8.615850e-47 |
| Msa0150920 | Msa0396790 | 0.846454 | 2.150918e-59 | -8.615850e-47 |
| Msa0160580 | Msa0396790 | 0.814099 | 1.830713e-51 | -8.615850e-47 |
| Msa0163690 | Msa0396790 | 0.815178 | 1.055970e-51 | -8.615850e-47 |
| Msa0168010 | Msa0396790 | 0.828606 | 8.187931e-55 | -8.615850e-47 |
| Msa0175060 | Msa0396790 | 0.815521 | 8.860301e-52 | -8.615850e-47 |
| Msa0177550 | Msa0396790 | 0.804729 | 1.878008e-49 | -8.615850e-47 |
| Msa0184390 | Msa0396790 | 0.811148 | 8.091883e-51 | -8.615850e-47 |
| Msa0190670 | Msa0396790 | 0.812929 | 3.309693e-51 | -8.615850e-47 |
| Msa0190890 | Msa0396790 | 0.805741 | 1.152875e-49 | -8.615850e-47 |
| Msa0194230 | Msa0396790 | 0.813236 | 2.834613e-51 | -8.615850e-47 |
| Msa0195580 | Msa0396790 | 0.805513 | 1.287180e-49 | -8.615850e-47 |
| Msa0207640 | Msa0396790 | 0.820510 | 6.601514e-53 | -8.615850e-47 |
| Msa0209060 | Msa0396790 | 0.814043 | 1.883623e-51 | -8.615850e-47 |
| Msa0218060 | Msa0396790 | 0.811328 | 7.396000e-51 | -8.615850e-47 |
| Msa0219060 | Msa0396790 | 0.812804 | 3.525752e-51 | -8.615850e-47 |
| Msa0234120 | Msa0396790 | 0.824424 | 8.130904e-54 | -8.615850e-47 |
| Msa0234130 | Msa0396790 | 0.804491 | 2.105573e-49 | -8.615850e-47 |
| Msa0366510 | Msa0396790 | 0.834224 | 3.391730e-56 | -8.615850e-47 |
| Msa0369990 | Msa0396790 | 0.802769 | 4.794960e-49 | -8.615850e-47 |
| Msa0374040 | Msa0396790 | 0.822234 | 2.641470e-53 | -8.615850e-47 |
| Msa0378390 | Msa0396790 | 0.800475 | 1.416123e-48 | -8.615850e-47 |
| Msa0390200 | Msa0396790 | 0.803372 | 3.598207e-49 | -8.615850e-47 |
| Msa0391270 | Msa0396790 | 0.807447 | 5.032176e-50 | -8.615850e-47 |
| Msa0396700 | Msa0396790 | 0.822454 | 2.347985e-53 | -8.615850e-47 |
| Msa0396790 | Msa0396860 | 0.831589 | 1.532533e-55 | -8.615850e-47 |
| Msa0396790 | Msa0396870 | 0.802238 | 6.167090e-49 | -8.615850e-47 |
| Msa0396790 | Msa0398690 | 0.813449 | 2.545363e-51 | -8.615850e-47 |
| Msa0396790 | Msa0405200 | 0.808258 | 3.383303e-50 | -8.615850e-47 |
| Msa0396790 | Msa0414480 | 0.844850 | 5.853781e-59 | -8.615850e-47 |
| Msa0396790 | Msa0415010 | 0.811872 | 5.632358e-51 | -8.615850e-47 |
| Msa0396790 | Msa0418160 | 0.830058 | 3.636402e-55 | -8.615850e-47 |
| Msa0396790 | Msa0423200 | 0.815308 | 9.883087e-52 | -8.615850e-47 |
| Msa0396790 | Msa0423220 | 0.808851 | 2.527424e-50 | -8.615850e-47 |
| Msa0396790 | Msa0427740 | 0.804166 | 2.461613e-49 | -8.615850e-47 |
| Msa0396790 | Msa0444210 | 0.814769 | 1.301683e-51 | -8.615850e-47 |
| Msa0396790 | Msa0444250 | 0.817683 | 2.903128e-52 | -8.615850e-47 |
| Msa0396790 | Msa0444400 | 0.938483 | 6.244129e-99 | -8.615850e-47 |
| Msa0396790 | Msa0445530 | 0.804007 | 2.656395e-49 | -8.615850e-47 |
| Msa0396790 | Msa0454770 | 0.821696 | 3.520040e-53 | -8.615850e-47 |
| Msa0396790 | Msa0464310 | 0.845329 | 4.346879e-59 | -8.615850e-47 |
| Msa0396790 | Msa0469450 | 0.838941 | 2.131993e-57 | -8.615850e-47 |
| Msa0396790 | Msa0490060 | 0.823111 | 1.651628e-53 | -8.615850e-47 |
| Msa0396790 | Msa0491770 | 0.801099 | 1.056585e-48 | -8.615850e-47 |
| Msa0396790 | Msa0491780 | 0.814775 | 1.297636e-51 | -8.615850e-47 |
| Msa0396790 | Msa0491800 | 0.826543 | 2.560292e-54 | -8.615850e-47 |
| Msa0396790 | Msa0491830 | 0.815495 | 8.979002e-52 | -8.615850e-47 |
| Msa0396790 | Msa0491950 | 0.981167 | 6.175255e-152 | -8.615850e-47 |
| Msa0396790 | Msa0497680 | 0.802623 | 5.137681e-49 | -8.615850e-47 |
| Msa0396790 | Msa0510870 | 0.803994 | 2.672291e-49 | -8.615850e-47 |
| Msa0396790 | Msa0515130 | 0.836234 | 1.054770e-56 | -8.615850e-47 |
| Msa0396790 | Msa0515150 | 0.807673 | 4.507257e-50 | -8.615850e-47 |
| Msa0396790 | Msa0518570 | 0.803934 | 2.750947e-49 | -8.615850e-47 |
| Msa0396790 | Msa0531080 | 0.800998 | 1.107740e-48 | -8.615850e-47 |
| Msa0396790 | Msa0533510 | 0.803718 | 3.049604e-49 | -8.615850e-47 |
| Msa0396790 | Msa0535570 | 0.860999 | 1.395813e-63 | -8.615850e-47 |
| Msa0396790 | Msa0538440 | 0.846999 | 1.525448e-59 | -8.615850e-47 |
| Msa0396790 | Msa0538450 | 0.827124 | 1.860514e-54 | -8.615850e-47 |
| Msa0396790 | Msa0538520 | 0.823693 | 1.207271e-53 | -8.615850e-47 |
| Msa0396790 | Msa0538530 | 0.841267 | 5.271615e-58 | -8.615850e-47 |
| Msa0396790 | Msa0540640 | 0.804670 | 1.932417e-49 | -8.615850e-47 |
| Msa0396790 | Msa0543740 | 0.826969 | 2.025913e-54 | -8.615850e-47 |
| Msa0396790 | Msa0545680 | 0.807863 | 4.107007e-50 | -8.615850e-47 |
| Msa0396790 | Msa0548790 | 0.828947 | 6.770264e-55 | -8.615850e-47 |
| Msa0396790 | Msa0554660 | 0.808489 | 3.020859e-50 | -8.615850e-47 |
| Msa0396790 | Msa0555920 | 0.801155 | 1.028931e-48 | -8.615850e-47 |
| Msa0396790 | Msa0587920 | 0.804424 | 2.174233e-49 | -8.615850e-47 |
| Msa0396790 | Msa0589730 | 0.801049 | 1.081679e-48 | -8.615850e-47 |
| Msa0396790 | Msa0591490 | 0.831169 | 1.944090e-55 | -8.615850e-47 |
| Msa0396790 | Msa0593870 | 0.809000 | 2.349265e-50 | -8.615850e-47 |
| Msa0396790 | Msa0594330 | 0.830155 | 3.443175e-55 | -8.615850e-47 |
| Msa0396790 | Msa0597820 | 0.806505 | 7.962232e-50 | -8.615850e-47 |
| Msa0396790 | Msa0599600 | 0.826601 | 2.480813e-54 | -8.615850e-47 |
| Msa0396790 | Msa0601400 | 0.805824 | 1.107527e-49 | -8.615850e-47 |
| Msa0396790 | Msa0604280 | 0.817372 | 3.411538e-52 | -8.615850e-47 |
| Msa0396790 | Msa0623750 | 0.811338 | 7.361383e-51 | -8.615850e-47 |
| Msa0396790 | Msa0628200 | 0.809338 | 1.987889e-50 | -8.615850e-47 |
| Msa0396790 | Msa0631700 | 0.831368 | 1.736925e-55 | -8.615850e-47 |
| Msa0396790 | Msa0633940 | 0.802258 | 6.109371e-49 | -8.615850e-47 |
| Msa0396790 | Msa0633970 | 0.803425 | 3.508296e-49 | -8.615850e-47 |
| Msa0396790 | Msa0634290 | 0.842918 | 1.927414e-58 | -8.615850e-47 |
| Msa0396790 | Msa0639410 | 0.817881 | 2.619541e-52 | -8.615850e-47 |
| Msa0396790 | Msa0640290 | 0.811820 | 5.782744e-51 | -8.615850e-47 |
| Msa0396790 | Msa0641700 | 0.814069 | 1.858925e-51 | -8.615850e-47 |
| Msa0396790 | Msa0643840 | 0.808277 | 3.351818e-50 | -8.615850e-47 |
| Msa0396790 | Msa0650100 | 0.810179 | 1.310619e-50 | -8.615850e-47 |
| Msa0396790 | Msa0651820 | 0.832130 | 1.126818e-55 | -8.615850e-47 |
| Msa0396790 | Msa0668220 | 0.824491 | 7.842817e-54 | -8.615850e-47 |
| Msa0396790 | Msa0670360 | 0.831531 | 1.583924e-55 | -8.615850e-47 |
| Msa0396790 | Msa0671640 | 0.809577 | 1.766368e-50 | -8.615850e-47 |
| Msa0396790 | Msa0678620 | 0.800837 | 1.194761e-48 | -8.615850e-47 |
| Msa0396790 | Msa0680460 | 0.806407 | 8.350362e-50 | -8.615850e-47 |
| Msa0396790 | Msa0682420 | 0.803345 | 3.644157e-49 | -8.615850e-47 |
| Msa0396790 | Msa0685080 | 0.814548 | 1.456514e-51 | -8.615850e-47 |
| Msa0396790 | Msa0692090 | 0.808927 | 2.434863e-50 | -8.615850e-47 |
| Msa0396790 | Msa0715220 | 0.800599 | 1.336212e-48 | -8.615850e-47 |
| Msa0396790 | Msa0716980 | 0.820224 | 7.678837e-53 | -8.615850e-47 |
| Msa0396790 | Msa0718770 | 0.807565 | 4.751074e-50 | -8.615850e-47 |
| Msa0396790 | Msa0720810 | 0.805992 | 1.021388e-49 | -8.615850e-47 |
| Msa0396790 | Msa0727230 | 0.802301 | 5.987252e-49 | -8.615850e-47 |
| Msa0396790 | Msa0727480 | 0.802692 | 4.971719e-49 | -8.615850e-47 |
| Msa0396790 | Msa0735280 | 0.806536 | 7.841629e-50 | -8.615850e-47 |
| Msa0396790 | Msa0744280 | -0.805580 | 1.246322e-49 | -8.615850e-47 |
| Msa0396790 | Msa0751960 | 0.805814 | 1.113152e-49 | -8.615850e-47 |
| Msa0396790 | Msa0754530 | 0.823116 | 1.646875e-53 | -8.615850e-47 |
| Msa0396790 | Msa0757120 | 0.817061 | 4.009038e-52 | -8.615850e-47 |
| Msa0396790 | Msa0758150 | 0.823363 | 1.441866e-53 | -8.615850e-47 |
| Msa0396790 | Msa0768670 | 0.800878 | 1.171984e-48 | -8.615850e-47 |
| Msa0396790 | Msa0777070 | 0.823365 | 1.440924e-53 | -8.615850e-47 |
| Msa0396790 | Msa0777250 | 0.800632 | 1.315614e-48 | -8.615850e-47 |
| Msa0396790 | Msa0787860 | 0.830140 | 3.472601e-55 | -8.615850e-47 |
| Msa0396790 | Msa0798230 | 0.800133 | 1.662682e-48 | -8.615850e-47 |
| Msa0396790 | Msa0798240 | 0.815557 | 8.699769e-52 | -8.615850e-47 |
| Msa0396790 | Msa0798840 | 0.811708 | 6.116357e-51 | -8.615850e-47 |
| Msa0396790 | Msa0802600 | 0.801212 | 1.001572e-48 | -8.615850e-47 |
| Msa0396790 | Msa0806930 | 0.815988 | 6.969714e-52 | -8.615850e-47 |
| Msa0396790 | Msa0814160 | 0.830910 | 2.250363e-55 | -8.615850e-47 |
| Msa0396790 | Msa0814230 | 0.808636 | 2.810225e-50 | -8.615850e-47 |
| Msa0396790 | Msa0816140 | 0.830154 | 3.444567e-55 | -8.615850e-47 |
| Msa0396790 | Msa0817100 | 0.819336 | 1.224995e-52 | -8.615850e-47 |
| Msa0396790 | Msa0824850 | 0.830728 | 2.494340e-55 | -8.615850e-47 |
| Msa0396790 | Msa0824860 | 0.817160 | 3.807609e-52 | -8.615850e-47 |
| Msa0396790 | Msa0827800 | 0.822193 | 2.700401e-53 | -8.615850e-47 |
| Msa0396790 | Msa0831890 | 0.815847 | 7.494692e-52 | -8.615850e-47 |
| Msa0396790 | Msa0833230 | 0.812785 | 3.559346e-51 | -8.615850e-47 |
| Msa0396790 | Msa0836740 | 0.804445 | 2.153060e-49 | -8.615850e-47 |
| Msa0396790 | Msa0836750 | 0.805426 | 1.342862e-49 | -8.615850e-47 |
| Msa0396790 | Msa0839040 | 0.817800 | 2.732201e-52 | -8.615850e-47 |
| Msa0396790 | Msa0841930 | 0.804924 | 1.710575e-49 | -8.615850e-47 |
| Msa0396790 | Msa0854840 | 0.834571 | 2.774828e-56 | -8.615850e-47 |
| Msa0396790 | Msa0855260 | 0.824104 | 9.670856e-54 | -8.615850e-47 |
| Msa0396790 | Msa0861730 | 0.828448 | 8.940662e-55 | -8.615850e-47 |
| Msa0396790 | Msa0863840 | 0.816805 | 4.575814e-52 | -8.615850e-47 |
| Msa0396790 | Msa0863850 | 0.818978 | 1.478191e-52 | -8.615850e-47 |
| Msa0396790 | Msa0863860 | 0.817385 | 3.389851e-52 | -8.615850e-47 |
| Msa0396790 | Msa0864160 | 0.836842 | 7.382498e-57 | -8.615850e-47 |
| Msa0396790 | Msa0873880 | 0.807056 | 6.091209e-50 | -8.615850e-47 |
| Msa0396790 | Msa0876600 | 0.802528 | 5.375457e-49 | -8.615850e-47 |
| Msa0396790 | Msa0886370 | 0.816603 | 5.078251e-52 | -8.615850e-47 |
| Msa0396790 | Msa0890210 | 0.811271 | 7.610089e-51 | -8.615850e-47 |
| Msa0396790 | Msa0893840 | 0.805625 | 1.219662e-49 | -8.615850e-47 |
| Msa0396790 | Msa0896910 | 0.815849 | 7.486985e-52 | -8.615850e-47 |
| Msa0396790 | Msa0896920 | 0.847414 | 1.174380e-59 | -8.615850e-47 |
| Msa0396790 | Msa0896950 | 0.834222 | 3.395850e-56 | -8.615850e-47 |
| Msa0396790 | Msa0910830 | 0.808283 | 3.342240e-50 | -8.615850e-47 |
| Msa0396790 | Msa0913550 | 0.844780 | 6.116145e-59 | -8.615850e-47 |
| Msa0396790 | Msa0921180 | 0.811225 | 7.787888e-51 | -8.615850e-47 |
| Msa0396790 | Msa0932900 | 0.810373 | 1.190667e-50 | -8.615850e-47 |
| Msa0396790 | Msa0932930 | 0.819106 | 1.382303e-52 | -8.615850e-47 |
| Msa0396790 | Msa0933590 | 0.805167 | 1.521212e-49 | -8.615850e-47 |
| Msa0396790 | Msa0933610 | 0.833428 | 5.362981e-56 | -8.615850e-47 |
| Msa0396790 | Msa0946010 | 0.814574 | 1.437154e-51 | -8.615850e-47 |
| Msa0396790 | Msa0951150 | 0.819794 | 9.634019e-53 | -8.615850e-47 |
| Msa0396790 | Msa0970790 | 0.827785 | 1.291612e-54 | -8.615850e-47 |
| Msa0396790 | Msa0987640 | 0.826855 | 2.157766e-54 | -8.615850e-47 |
| Msa0396790 | Msa0993450 | 0.802787 | 4.752914e-49 | -8.615850e-47 |
| Msa0396790 | Msa0993710 | 0.800569 | 1.355129e-48 | -8.615850e-47 |
| Msa0396790 | Msa0996980 | 0.831049 | 2.080342e-55 | -8.615850e-47 |
| Msa0396790 | Msa1005370 | 0.804822 | 1.795791e-49 | -8.615850e-47 |
| Msa0396790 | Msa1006030 | 0.814653 | 1.380961e-51 | -8.615850e-47 |
| Msa0396790 | Msa1006170 | 0.830259 | 3.248472e-55 | -8.615850e-47 |
| Msa0396790 | Msa1018590 | 0.805758 | 1.143611e-49 | -8.615850e-47 |
| Msa0396790 | Msa1022490 | 0.816791 | 4.609590e-52 | -8.615850e-47 |
| Msa0396790 | Msa1022510 | 0.828724 | 7.665805e-55 | -8.615850e-47 |
| Msa0396790 | Msa1024350 | 0.816323 | 5.866225e-52 | -8.615850e-47 |
| Msa0396790 | Msa1024420 | 0.829626 | 4.632612e-55 | -8.615850e-47 |
| Msa0396790 | Msa1024480 | 0.809606 | 1.741232e-50 | -8.615850e-47 |
| Msa0396790 | Msa1030320 | 0.803756 | 2.995303e-49 | -8.615850e-47 |
| Msa0396790 | Msa1035050 | 0.804764 | 1.847398e-49 | -8.615850e-47 |
| Msa0396790 | Msa1037360 | 0.809455 | 1.875937e-50 | -8.615850e-47 |
| Msa0396790 | Msa1047300 | 0.809851 | 1.542799e-50 | -8.615850e-47 |
| Msa0396790 | Msa1047340 | 0.810556 | 1.086853e-50 | -8.615850e-47 |
| Msa0396790 | Msa1048350 | 0.830087 | 3.577651e-55 | -8.615850e-47 |
| Msa0396790 | Msa1048390 | 0.821054 | 4.950818e-53 | -8.615850e-47 |
| Msa0396790 | Msa1049400 | 0.808102 | 3.652460e-50 | -8.615850e-47 |
| Msa0396790 | Msa1061670 | 0.826337 | 2.867306e-54 | -8.615850e-47 |
| Msa0396790 | Msa1064940 | 0.855709 | 5.257428e-62 | -8.615850e-47 |
| Msa0396790 | Msa1075030 | 0.800935 | 1.140919e-48 | -8.615850e-47 |
| Msa0396790 | Msa1076280 | 0.805611 | 1.227857e-49 | -8.615850e-47 |
| Msa0396790 | Msa1087370 | 0.824861 | 6.416018e-54 | -8.615850e-47 |
| Msa0396790 | Msa1087380 | 0.841910 | 3.568169e-58 | -8.615850e-47 |
| Msa0396790 | Msa1098100 | 0.806673 | 7.339679e-50 | -8.615850e-47 |
| Msa0396790 | Msa1099640 | 0.800719 | 1.263205e-48 | -8.615850e-47 |
| Msa0396790 | Msa1100030 | 0.811564 | 6.574544e-51 | -8.615850e-47 |
| Msa0396790 | Msa1100330 | 0.804491 | 2.105590e-49 | -8.615850e-47 |
| Msa0396790 | Msa1103450 | 0.812136 | 4.935468e-51 | -8.615850e-47 |
| Msa0396790 | Msa1104960 | 0.815204 | 1.041935e-51 | -8.615850e-47 |
| Msa0396790 | Msa1106680 | 0.826837 | 2.178199e-54 | -8.615850e-47 |
| Msa0396790 | Msa1106960 | 0.826884 | 2.123634e-54 | -8.615850e-47 |
| Msa0396790 | Msa1107220 | 0.800262 | 1.565229e-48 | -8.615850e-47 |
| Msa0396790 | Msa1107250 | 0.805381 | 1.371884e-49 | -8.615850e-47 |
| Msa0396790 | Msa1108370 | 0.802966 | 4.364350e-49 | -8.615850e-47 |
| Msa0396790 | Msa1108560 | 0.810336 | 1.212843e-50 | -8.615850e-47 |
| Msa0396790 | Msa1108610 | 0.817881 | 2.620359e-52 | -8.615850e-47 |
| Msa0396790 | Msa1110040 | 0.814657 | 1.377797e-51 | -8.615850e-47 |
| Msa0396790 | Msa1115900 | 0.805271 | 1.446603e-49 | -8.615850e-47 |
| Msa0396790 | Msa1120680 | 0.801147 | 1.032846e-48 | -8.615850e-47 |
| Msa0396790 | Msa1123000 | 0.816016 | 6.871670e-52 | -8.615850e-47 |
| Msa0396790 | Msa1131300 | -0.801600 | 8.341636e-49 | -8.615850e-47 |
| Msa0396790 | Msa1138110 | 0.828290 | 9.760456e-55 | -8.615850e-47 |
| Msa0396790 | Msa1143250 | 0.811906 | 5.537120e-51 | -8.615850e-47 |
| Msa0396790 | Msa1147010 | 0.805945 | 1.044553e-49 | -8.615850e-47 |
| Msa0396790 | Msa1147030 | 0.812773 | 3.581843e-51 | -8.615850e-47 |
| Msa0396790 | Msa1148210 | 0.804096 | 2.545002e-49 | -8.615850e-47 |
| Msa0396790 | Msa1152330 | 0.828740 | 7.600761e-55 | -8.615850e-47 |
| Msa0396790 | Msa1153690 | 0.828096 | 1.087120e-54 | -8.615850e-47 |
| Msa0396790 | Msa1160540 | 0.808374 | 3.196099e-50 | -8.615850e-47 |
| Msa0396790 | Msa1162370 | 0.801145 | 1.033865e-48 | -8.615850e-47 |
| Msa0396790 | Msa1164240 | 0.803380 | 3.582975e-49 | -8.615850e-47 |
| Msa0396790 | Msa1167960 | 0.803262 | 3.791300e-49 | -8.615850e-47 |
| Msa0396790 | Msa1170340 | 0.821927 | 3.111540e-53 | -8.615850e-47 |
| Msa0396790 | Msa1173290 | 0.800876 | 1.173026e-48 | -8.615850e-47 |
| Msa0396790 | Msa1177090 | 0.820056 | 8.389931e-53 | -8.615850e-47 |
| Msa0396790 | Msa1179190 | 0.800028 | 1.746209e-48 | -8.615850e-47 |
| Msa0396790 | Msa1181090 | 0.810821 | 9.528410e-51 | -8.615850e-47 |
| Msa0396790 | Msa1188080 | 0.808802 | 2.589204e-50 | -8.615850e-47 |
| Msa0396790 | Msa1206330 | 0.821890 | 3.174119e-53 | -8.615850e-47 |
| Msa0396790 | Msa1206380 | 0.824561 | 7.552874e-54 | -8.615850e-47 |
| Msa0396790 | Msa1223960 | 0.818653 | 1.751635e-52 | -8.615850e-47 |
| Msa0396790 | Msa1223990 | 0.816485 | 5.396552e-52 | -8.615850e-47 |
| Msa0396790 | Msa1233620 | 0.802858 | 4.596099e-49 | -8.615850e-47 |
| Msa0396790 | Msa1236680 | 0.803648 | 3.152972e-49 | -8.615850e-47 |
| Msa0396790 | Msa1239190 | 0.804792 | 1.822278e-49 | -8.615850e-47 |
| Msa0396790 | Msa1240710 | 0.805693 | 1.180446e-49 | -8.615850e-47 |
| Msa0396790 | Msa1256730 | 0.808528 | 2.963120e-50 | -8.615850e-47 |
| Msa0396790 | Msa1263110 | 0.811458 | 6.932294e-51 | -8.615850e-47 |
| Msa0396790 | Msa1263120 | 0.820360 | 7.147548e-53 | -8.615850e-47 |
| Msa0396790 | Msa1267990 | 0.800224 | 1.593019e-48 | -8.615850e-47 |
| Msa0396790 | Msa1275840 | 0.815164 | 1.063432e-51 | -8.615850e-47 |
| Msa0396790 | Msa1294020 | 0.801265 | 9.771290e-49 | -8.615850e-47 |
| Msa0396790 | Msa1298090 | 0.822855 | 1.894695e-53 | -8.615850e-47 |
| Msa0396790 | Msa1300610 | 0.817436 | 3.301640e-52 | -8.615850e-47 |
| Msa0396790 | Msa1314020 | 0.809411 | 1.917122e-50 | -8.615850e-47 |
| Msa0396790 | Msa1316960 | 0.801331 | 9.468813e-49 | -8.615850e-47 |
| Msa0396790 | Msa1319010 | 0.800921 | 1.148541e-48 | -8.615850e-47 |
| Msa0396790 | Msa1321970 | 0.800826 | 1.201201e-48 | -8.615850e-47 |
| Msa0396790 | Msa1323120 | 0.805311 | 1.419050e-49 | -8.615850e-47 |
| Msa0396790 | Msa1323150 | 0.803156 | 3.988582e-49 | -8.615850e-47 |
| Msa0396790 | Msa1329740 | 0.808348 | 3.237380e-50 | -8.615850e-47 |
| Msa0396790 | Msa1341030 | 0.804473 | 2.124350e-49 | -8.615850e-47 |
| Msa0396790 | Msa1355340 | 0.839015 | 2.039406e-57 | -8.615850e-47 |
| Msa0396790 | Msa1357840 | 0.809138 | 2.194114e-50 | -8.615850e-47 |
| Msa0396790 | Msa1378950 | 0.833817 | 4.288791e-56 | -8.615850e-47 |
| Msa0396790 | Msa1380740 | 0.813021 | 3.160018e-51 | -8.615850e-47 |
| Msa0396790 | Msa1387480 | 0.806152 | 9.449339e-50 | -8.615850e-47 |
| Msa0396790 | Msa1411550 | 0.842364 | 2.704992e-58 | -8.615850e-47 |
| Msa0396790 | Msa1412360 | 0.816739 | 4.735266e-52 | -8.615850e-47 |
| Msa0396790 | Msa1421130 | 0.806288 | 8.848712e-50 | -8.615850e-47 |
| Msa0396790 | Msa1441300 | 0.810367 | 1.193842e-50 | -8.615850e-47 |
| Msa0396790 | Msa1445900 | 0.820292 | 7.409767e-53 | -8.615850e-47 |
| Msa0396790 | Msa1446090 | 0.806233 | 9.085901e-50 | -8.615850e-47 |
| Msa0396790 | Msa1453650 | 0.986303 | 2.430212e-166 | -8.615850e-47 |
| Msa0396790 | Msa1458270 | 0.819306 | 1.244399e-52 | -8.615850e-47 |
| Msa0396790 | Msa1459610 | 0.811528 | 6.694090e-51 | -8.615850e-47 |
| Msa0242830 | Msa0396790 | 0.813099 | 3.038276e-51 | -8.615850e-47 |
| Msa0243970 | Msa0396790 | 0.805059 | 1.602601e-49 | -8.615850e-47 |
| Msa0243990 | Msa0396790 | 0.805006 | 1.643766e-49 | -8.615850e-47 |
| Msa0258010 | Msa0396790 | 0.824138 | 9.492098e-54 | -8.615850e-47 |
| Msa0258740 | Msa0396790 | 0.800286 | 1.547692e-48 | -8.615850e-47 |
| Msa0261400 | Msa0396790 | 0.800603 | 1.333808e-48 | -8.615850e-47 |
| Msa0266640 | Msa0396790 | 0.806048 | 9.936608e-50 | -8.615850e-47 |
| Msa0269240 | Msa0396790 | 0.812411 | 4.296995e-51 | -8.615850e-47 |
| Msa0269710 | Msa0396790 | 0.821826 | 3.284989e-53 | -8.615850e-47 |
| Msa0274250 | Msa0396790 | 0.837913 | 3.924945e-57 | -8.615850e-47 |
| Msa0274260 | Msa0396790 | 0.839873 | 1.220979e-57 | -8.615850e-47 |
| Msa0275570 | Msa0396790 | 0.812958 | 3.261826e-51 | -8.615850e-47 |
| Msa0276780 | Msa0396790 | 0.801765 | 7.716909e-49 | -8.615850e-47 |
| Msa0278460 | Msa0396790 | 0.804242 | 2.372651e-49 | -8.615850e-47 |
| Msa0278960 | Msa0396790 | 0.807576 | 4.724029e-50 | -8.615850e-47 |
| Msa0280980 | Msa0396790 | 0.803722 | 3.043433e-49 | -8.615850e-47 |
| Msa0281190 | Msa0396790 | 0.823891 | 1.085040e-53 | -8.615850e-47 |
| Msa0287630 | Msa0396790 | 0.816547 | 5.227002e-52 | -8.615850e-47 |
| Msa0288540 | Msa0396790 | 0.814320 | 1.635843e-51 | -8.615850e-47 |
| Msa0308740 | Msa0396790 | 0.805077 | 1.588877e-49 | -8.615850e-47 |
| Msa0311540 | Msa0396790 | 0.805240 | 1.468364e-49 | -8.615850e-47 |
| Msa0316230 | Msa0396790 | 0.808056 | 3.735771e-50 | -8.615850e-47 |
| Msa0318360 | Msa0396790 | 0.803120 | 4.056969e-49 | -8.615850e-47 |
| Msa0318370 | Msa0396790 | 0.803855 | 2.856223e-49 | -8.615850e-47 |
| Msa0320150 | Msa0396790 | 0.801670 | 8.068691e-49 | -8.615850e-47 |
| Msa0323090 | Msa0396790 | 0.810591 | 1.068090e-50 | -8.615850e-47 |
| Msa0326770 | Msa0396790 | 0.809013 | 2.333279e-50 | -8.615850e-47 |
| Msa0335340 | Msa0396790 | 0.805947 | 1.043763e-49 | -8.615850e-47 |
| Msa0346170 | Msa0396790 | 0.810848 | 9.396618e-51 | -8.615850e-47 |
| Msa0348370 | Msa0396790 | 0.800439 | 1.440201e-48 | -8.615850e-47 |
| Msa0349910 | Msa0396790 | 0.837052 | 6.526562e-57 | -8.615850e-47 |
| Msa0353010 | Msa0396790 | 0.800551 | 1.366830e-48 | -8.615850e-47 |
| Msa0354600 | Msa0396790 | 0.815955 | 7.090836e-52 | -8.615850e-47 |
| Msa0356200 | Msa0396790 | 0.809389 | 1.938231e-50 | -8.615850e-47 |
| Msa0356240 | Msa0396790 | 0.829396 | 5.270320e-55 | -8.615850e-47 |
| Msa0356250 | Msa0396790 | 0.806981 | 6.317264e-50 | -8.615850e-47 |
| Msa0356270 | Msa0396790 | 0.815088 | 1.105908e-51 | -8.615850e-47 |
| Msa0356320 | Msa0396790 | 0.822857 | 1.892982e-53 | -8.615850e-47 |
| Msa0356380 | Msa0396790 | 0.805701 | 1.175745e-49 | -8.615850e-47 |
| Msa0356410 | Msa0396790 | 0.815806 | 7.653405e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396790 | MtrunA17_Chr3g0084161 | 93.194 | 191 | 13 | 0 | 1 | 191 | 1 | 191 | 1.36e-133 | 372 |
| Msa0396790 | MtrunA17_Chr3g0084221 | 76.440 | 191 | 45 | 0 | 1 | 191 | 1 | 191 | 5.06e-108 | 307 |
| Msa0396790 | MtrunA17_Chr3g0084191 | 77.320 | 194 | 37 | 2 | 1 | 189 | 1 | 192 | 9.22e-104 | 307 |
| Msa0396790 | MtrunA17_Chr3g0084201 | 72.251 | 191 | 52 | 1 | 1 | 191 | 1 | 190 | 1.08e-102 | 293 |
| Msa0396790 | MtrunA17_Chr8g0353131 | 69.474 | 190 | 58 | 0 | 2 | 191 | 3 | 192 | 2.00e-101 | 290 |
| Msa0396790 | MtrunA17_Chr3g0082411 | 58.730 | 63 | 21 | 1 | 50 | 107 | 1 | 63 | 1.14e-20 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396790 | AT3G27890.1 | 68.984 | 187 | 58 | 0 | 4 | 190 | 10 | 196 | 7.91e-92 | 266 |
Find 42 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCTGCCTTGAAGTTTA+AGG | 0.117582 | 3_2:+15623932 | None:intergenic |
| AATCGACTATATTGATATTT+CGG | 0.315855 | 3_2:-15624456 | Msa0396790:CDS |
| AAATATCAATATAGTCGATT+TGG | 0.331349 | 3_2:+15624459 | None:intergenic |
| ATTTCTGCCTTGAAGTTTAA+GGG | 0.343293 | 3_2:+15623933 | None:intergenic |
| AACATCATCTTCGCCAAATC+GGG | 0.347815 | 3_2:-15624104 | Msa0396790:CDS |
| CATACTGGCCTCATTCGTTA+TGG | 0.349761 | 3_2:-15625053 | Msa0396790:intron |
| CGCTAAAGAATGCGATTGAT+TGG | 0.357043 | 3_2:-15624209 | Msa0396790:CDS |
| GGTTTACCAGCCCATGCATT+TGG | 0.360432 | 3_2:+15624174 | None:intergenic |
| ATTAAGATTGTTGCTCTCTC+TGG | 0.362873 | 3_2:-15625098 | Msa0396790:CDS |
| CAACATCATCTTCGCCAAAT+CGG | 0.377634 | 3_2:-15624105 | Msa0396790:CDS |
| GGCTCCTCCAACACTTACTA+TGG | 0.391189 | 3_2:+15624146 | None:intergenic |
| TATCAAGGAAAACCCCGATT+TGG | 0.397239 | 3_2:+15624091 | None:intergenic |
| CTGGATGCTTAAATACATCT+AGG | 0.405336 | 3_2:+15624040 | None:intergenic |
| CGAAAAGCTTCAACTTCAGC+TGG | 0.413282 | 3_2:+15624389 | None:intergenic |
| GAGACAGAATAATTATATTC+AGG | 0.417383 | 3_2:+15624326 | None:intergenic |
| GTAAGTGTTGGAGGAGCCTT+TGG | 0.428342 | 3_2:-15624141 | Msa0396790:CDS |
| TTTAAGGGTAAATTCCTTCA+AGG | 0.429920 | 3_2:+15623948 | None:intergenic |
| TGAAGAGATCAAGAATAGAT+TGG | 0.437949 | 3_2:-15623986 | Msa0396790:CDS |
| GAATATAATTATTCTGTCTC+AGG | 0.442769 | 3_2:-15624323 | Msa0396790:intron |
| GAAAGTTCTTGTGTCCTTGA+AGG | 0.447891 | 3_2:-15623962 | Msa0396790:CDS |
| TATTAATGAAATGAATATCA+AGG | 0.449069 | 3_2:+15624076 | None:intergenic |
| GCTAAAGAATGCGATTGATT+GGG | 0.485585 | 3_2:-15624208 | Msa0396790:CDS |
| GAATTTACCCTTAAACTTCA+AGG | 0.490730 | 3_2:-15623940 | Msa0396790:CDS |
| TTACCAGCCCATGCATTTGG+TGG | 0.503471 | 3_2:+15624177 | None:intergenic |
| AACTCTGATCTTGAGAAAGA+AGG | 0.504804 | 3_2:-15624419 | Msa0396790:CDS |
| CAATCAATCGCATTCTTTAG+CGG | 0.506871 | 3_2:+15624210 | None:intergenic |
| GTTGGAGGAGCCTTTGGTGG+AGG | 0.513008 | 3_2:-15624135 | Msa0396790:CDS |
| CATCAAGACCACCAAATGCA+TGG | 0.519270 | 3_2:-15624185 | Msa0396790:CDS |
| GTAAATTACCATAACGAATG+AGG | 0.533048 | 3_2:+15625045 | None:intergenic |
| AGTGTTGGAGGAGCCTTTGG+TGG | 0.533206 | 3_2:-15624138 | Msa0396790:CDS |
| TCAAGATCAGAGTTCAACAT+TGG | 0.545865 | 3_2:+15624428 | None:intergenic |
| GCTGCCATAGTAAGTGTTGG+AGG | 0.554560 | 3_2:-15624150 | Msa0396790:CDS |
| AGACCACCAAATGCATGGGC+TGG | 0.561726 | 3_2:-15624180 | Msa0396790:CDS |
| CCAACACTTACTATGGCAGC+AGG | 0.570215 | 3_2:+15624153 | None:intergenic |
| ATCAAGACCACCAAATGCAT+GGG | 0.580578 | 3_2:-15624184 | Msa0396790:CDS |
| CCTGCTGCCATAGTAAGTGT+TGG | 0.586831 | 3_2:-15624153 | Msa0396790:CDS |
| AATGAGGCCAGTATGAAAAG+AGG | 0.609156 | 3_2:+15625061 | None:intergenic |
| AATACATCTAGGTAGAACTC+AGG | 0.627908 | 3_2:+15624051 | None:intergenic |
| ACATCATCTTCGCCAAATCG+GGG | 0.637712 | 3_2:-15624103 | Msa0396790:CDS |
| TTGATTAACAAATAATGACA+AGG | 0.643119 | 3_2:-15625124 | None:intergenic |
| ATGTAACGATGATGGTGACT+TGG | 0.649079 | 3_2:-15624013 | Msa0396790:CDS |
| TGATTAACAAATAATGACAA+GGG | 0.676333 | 3_2:-15625123 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTTGAATATTAAATTTGA+TGG | - | chr3_2:15624493-15624512 | Msa0396790:CDS | 15.0% |
| !!! | CATTTTTTTTTTCTATTCAT+TGG | - | chr3_2:15624521-15624540 | Msa0396790:intron | 15.0% |
| !! | TATTAATGAAATGAATATCA+AGG | + | chr3_2:15624967-15624986 | None:intergenic | 15.0% |
| !! | TCTTTGAATATTAAATTTGA+TGG | - | chr3_2:15624493-15624512 | Msa0396790:CDS | 15.0% |
| !!! | CATTTTTTTTTTCTATTCAT+TGG | - | chr3_2:15624521-15624540 | Msa0396790:intron | 15.0% |
| !! | TATTAATGAAATGAATATCA+AGG | + | chr3_2:15624967-15624986 | None:intergenic | 15.0% |
| !! | GATATTGCATATTATATACA+GGG | - | chr3_2:15624126-15624145 | Msa0396790:CDS | 20.0% |
| !! | ATATTGCATATTATATACAG+GGG | - | chr3_2:15624127-15624146 | Msa0396790:CDS | 20.0% |
| !!! | TATTTTAAATGTAGAGAAGT+GGG | + | chr3_2:15624176-15624195 | None:intergenic | 20.0% |
| !!! | ATATTTTAAATGTAGAGAAG+TGG | + | chr3_2:15624177-15624196 | None:intergenic | 20.0% |
| !! | CTACTTAGCAAAAAAAAAAA+AGG | - | chr3_2:15624216-15624235 | Msa0396790:intron | 20.0% |
| !!! | GTTTAACTTGTTGAAAAAAT+AGG | - | chr3_2:15624418-15624437 | Msa0396790:CDS | 20.0% |
| !! | AAATATCAATATAGTCGATT+TGG | + | chr3_2:15624584-15624603 | None:intergenic | 20.0% |
| !! | AATCGACTATATTGATATTT+CGG | - | chr3_2:15624584-15624603 | Msa0396790:intron | 20.0% |
| !! | AAAAAGAATCTTATTGACAA+AGG | + | chr3_2:15624776-15624795 | None:intergenic | 20.0% |
| !! | GATATTGCATATTATATACA+GGG | - | chr3_2:15624126-15624145 | Msa0396790:CDS | 20.0% |
| !! | ATATTGCATATTATATACAG+GGG | - | chr3_2:15624127-15624146 | Msa0396790:CDS | 20.0% |
| !!! | TATTTTAAATGTAGAGAAGT+GGG | + | chr3_2:15624176-15624195 | None:intergenic | 20.0% |
| !!! | ATATTTTAAATGTAGAGAAG+TGG | + | chr3_2:15624177-15624196 | None:intergenic | 20.0% |
| !! | CTACTTAGCAAAAAAAAAAA+AGG | - | chr3_2:15624216-15624235 | Msa0396790:intron | 20.0% |
| !!! | GTTTAACTTGTTGAAAAAAT+AGG | - | chr3_2:15624418-15624437 | Msa0396790:CDS | 20.0% |
| !! | AAATATCAATATAGTCGATT+TGG | + | chr3_2:15624584-15624603 | None:intergenic | 20.0% |
| !! | AATCGACTATATTGATATTT+CGG | - | chr3_2:15624584-15624603 | Msa0396790:intron | 20.0% |
| !! | AAAAAGAATCTTATTGACAA+AGG | + | chr3_2:15624776-15624795 | None:intergenic | 20.0% |
| !! | TGAGTTTAGTTTAATTGGTA+GGG | - | chr3_2:15624104-15624123 | Msa0396790:CDS | 25.0% |
| ! | GGATATTGCATATTATATAC+AGG | - | chr3_2:15624125-15624144 | Msa0396790:CDS | 25.0% |
| ! | TATTGCATATTATATACAGG+GGG | - | chr3_2:15624128-15624147 | Msa0396790:CDS | 25.0% |
| !! | ATTTTAAATGTAGAGAAGTG+GGG | + | chr3_2:15624175-15624194 | None:intergenic | 25.0% |
| ! | AAACTGAGTGAATATTGTTT+AGG | - | chr3_2:15624259-15624278 | Msa0396790:intron | 25.0% |
| ! | AACTGAGTGAATATTGTTTA+GGG | - | chr3_2:15624260-15624279 | Msa0396790:intron | 25.0% |
| ! | AAAAGTTGAAATTAACCTGT+CGG | - | chr3_2:15624364-15624383 | Msa0396790:CDS | 25.0% |
| !!! | AACTTGTTGAAAAAATAGGA+TGG | - | chr3_2:15624422-15624441 | Msa0396790:CDS | 25.0% |
| ! | ATTCAAAGACTCAAAATCAA+AGG | + | chr3_2:15624482-15624501 | None:intergenic | 25.0% |
| ! | GAGACAGAATAATTATATTC+AGG | + | chr3_2:15624717-15624736 | None:intergenic | 25.0% |
| ! | GAATATAATTATTCTGTCTC+AGG | - | chr3_2:15624717-15624736 | Msa0396790:intron | 25.0% |
| !! | TGAGTTTAGTTTAATTGGTA+GGG | - | chr3_2:15624104-15624123 | Msa0396790:CDS | 25.0% |
| ! | GGATATTGCATATTATATAC+AGG | - | chr3_2:15624125-15624144 | Msa0396790:CDS | 25.0% |
| ! | TATTGCATATTATATACAGG+GGG | - | chr3_2:15624128-15624147 | Msa0396790:CDS | 25.0% |
| !! | ATTTTAAATGTAGAGAAGTG+GGG | + | chr3_2:15624175-15624194 | None:intergenic | 25.0% |
| ! | AAACTGAGTGAATATTGTTT+AGG | - | chr3_2:15624259-15624278 | Msa0396790:intron | 25.0% |
| ! | AACTGAGTGAATATTGTTTA+GGG | - | chr3_2:15624260-15624279 | Msa0396790:intron | 25.0% |
| ! | AAAAGTTGAAATTAACCTGT+CGG | - | chr3_2:15624364-15624383 | Msa0396790:CDS | 25.0% |
| !!! | AACTTGTTGAAAAAATAGGA+TGG | - | chr3_2:15624422-15624441 | Msa0396790:CDS | 25.0% |
| ! | ATTCAAAGACTCAAAATCAA+AGG | + | chr3_2:15624482-15624501 | None:intergenic | 25.0% |
| ! | GAGACAGAATAATTATATTC+AGG | + | chr3_2:15624717-15624736 | None:intergenic | 25.0% |
| ! | GAATATAATTATTCTGTCTC+AGG | - | chr3_2:15624717-15624736 | Msa0396790:intron | 25.0% |
| GTAAATTACCATAACGAATG+AGG | + | chr3_2:15623998-15624017 | None:intergenic | 30.0% | |
| AAGGAAAAAAAGAAGAGAAG+AGG | + | chr3_2:15624049-15624068 | None:intergenic | 30.0% | |
| ACCAATTAAACTAAACTCAC+CGG | + | chr3_2:15624103-15624122 | None:intergenic | 30.0% | |
| ! | GTGAGTTTAGTTTAATTGGT+AGG | - | chr3_2:15624103-15624122 | Msa0396790:CDS | 30.0% |
| ATATTATATACAGGGGGTTA+GGG | - | chr3_2:15624134-15624153 | Msa0396790:CDS | 30.0% | |
| ACTGAGTGAATATTGTTTAG+GGG | - | chr3_2:15624261-15624280 | Msa0396790:intron | 30.0% | |
| !! | CTAAAATTGCGGGTTTTAAT+AGG | + | chr3_2:15624339-15624358 | None:intergenic | 30.0% |
| ! | CTATTAAAACCCGCAATTTT+AGG | - | chr3_2:15624337-15624356 | Msa0396790:CDS | 30.0% |
| ! | ACTTTTCCAACCTAAAATTG+CGG | + | chr3_2:15624350-15624369 | None:intergenic | 30.0% |
| ! | TTTTCAACAAGTTAAACGAC+TGG | + | chr3_2:15624415-15624434 | None:intergenic | 30.0% |
| TTGTTGAAAAAATAGGATGG+TGG | - | chr3_2:15624425-15624444 | Msa0396790:CDS | 30.0% | |
| CTAAGCAAAAATGTTCTTGA+TGG | - | chr3_2:15624555-15624574 | Msa0396790:intron | 30.0% | |
| TGAAGAGATCAAGAATAGAT+TGG | - | chr3_2:15625054-15625073 | Msa0396790:CDS | 30.0% | |
| TTTAAGGGTAAATTCCTTCA+AGG | + | chr3_2:15625095-15625114 | None:intergenic | 30.0% | |
| GAATTTACCCTTAAACTTCA+AGG | - | chr3_2:15625100-15625119 | Msa0396790:CDS | 30.0% | |
| ATTTCTGCCTTGAAGTTTAA+GGG | + | chr3_2:15625110-15625129 | None:intergenic | 30.0% | |
| AATTTCTGCCTTGAAGTTTA+AGG | + | chr3_2:15625111-15625130 | None:intergenic | 30.0% | |
| GTAAATTACCATAACGAATG+AGG | + | chr3_2:15623998-15624017 | None:intergenic | 30.0% | |
| AAGGAAAAAAAGAAGAGAAG+AGG | + | chr3_2:15624049-15624068 | None:intergenic | 30.0% | |
| ACCAATTAAACTAAACTCAC+CGG | + | chr3_2:15624103-15624122 | None:intergenic | 30.0% | |
| ! | GTGAGTTTAGTTTAATTGGT+AGG | - | chr3_2:15624103-15624122 | Msa0396790:CDS | 30.0% |
| ATATTATATACAGGGGGTTA+GGG | - | chr3_2:15624134-15624153 | Msa0396790:CDS | 30.0% | |
| ACTGAGTGAATATTGTTTAG+GGG | - | chr3_2:15624261-15624280 | Msa0396790:intron | 30.0% | |
| !! | CTAAAATTGCGGGTTTTAAT+AGG | + | chr3_2:15624339-15624358 | None:intergenic | 30.0% |
| ! | CTATTAAAACCCGCAATTTT+AGG | - | chr3_2:15624337-15624356 | Msa0396790:CDS | 30.0% |
| ! | ACTTTTCCAACCTAAAATTG+CGG | + | chr3_2:15624350-15624369 | None:intergenic | 30.0% |
| ! | TTTTCAACAAGTTAAACGAC+TGG | + | chr3_2:15624415-15624434 | None:intergenic | 30.0% |
| TTGTTGAAAAAATAGGATGG+TGG | - | chr3_2:15624425-15624444 | Msa0396790:CDS | 30.0% | |
| CTAAGCAAAAATGTTCTTGA+TGG | - | chr3_2:15624555-15624574 | Msa0396790:intron | 30.0% | |
| TGAAGAGATCAAGAATAGAT+TGG | - | chr3_2:15625054-15625073 | Msa0396790:CDS | 30.0% | |
| TTTAAGGGTAAATTCCTTCA+AGG | + | chr3_2:15625095-15625114 | None:intergenic | 30.0% | |
| GAATTTACCCTTAAACTTCA+AGG | - | chr3_2:15625100-15625119 | Msa0396790:CDS | 30.0% | |
| ATTTCTGCCTTGAAGTTTAA+GGG | + | chr3_2:15625110-15625129 | None:intergenic | 30.0% | |
| AATTTCTGCCTTGAAGTTTA+AGG | + | chr3_2:15625111-15625130 | None:intergenic | 30.0% | |
| ATTAAGATTGTTGCTCTCTC+TGG | - | chr3_2:15623942-15623961 | Msa0396790:CDS | 35.0% | |
| CTCGAAGTAGTCATTTAGAA+AGG | + | chr3_2:15624068-15624087 | None:intergenic | 35.0% | |
| CTTTCTAAATGACTACTTCG+AGG | - | chr3_2:15624066-15624085 | Msa0396790:CDS | 35.0% | |
| CCAATTAAACTAAACTCACC+GGG | + | chr3_2:15624102-15624121 | None:intergenic | 35.0% | |
| CATATTATATACAGGGGGTT+AGG | - | chr3_2:15624133-15624152 | Msa0396790:CDS | 35.0% | |
| CTGAGTGAATATTGTTTAGG+GGG | - | chr3_2:15624262-15624281 | Msa0396790:intron | 35.0% | |
| !! | AATTGCGGGTTTTAATAGGT+CGG | + | chr3_2:15624335-15624354 | None:intergenic | 35.0% |
| !! | TAAAACCCGCAATTTTAGGT+TGG | - | chr3_2:15624341-15624360 | Msa0396790:CDS | 35.0% |
| ! | CTTTTCCAACCTAAAATTGC+GGG | + | chr3_2:15624349-15624368 | None:intergenic | 35.0% |
| TTGAAATTAACCTGTCGGAT+AGG | - | chr3_2:15624369-15624388 | Msa0396790:CDS | 35.0% | |
| GTTTAATAAACCTATCCGAC+AGG | + | chr3_2:15624382-15624401 | None:intergenic | 35.0% | |
| TCAAGATCAGAGTTCAACAT+TGG | + | chr3_2:15624615-15624634 | None:intergenic | 35.0% | |
| AACTCTGATCTTGAGAAAGA+AGG | - | chr3_2:15624621-15624640 | Msa0396790:intron | 35.0% | |
| CAATCAATCGCATTCTTTAG+CGG | + | chr3_2:15624833-15624852 | None:intergenic | 35.0% | |
| GCTAAAGAATGCGATTGATT+GGG | - | chr3_2:15624832-15624851 | Msa0396790:intron | 35.0% | |
| AATACATCTAGGTAGAACTC+AGG | + | chr3_2:15624992-15625011 | None:intergenic | 35.0% | |
| CTGGATGCTTAAATACATCT+AGG | + | chr3_2:15625003-15625022 | None:intergenic | 35.0% | |
| ! | CCATCATCGTTACATTTTTC+TGG | + | chr3_2:15625022-15625041 | None:intergenic | 35.0% |
| CCAGAAAAATGTAACGATGA+TGG | - | chr3_2:15625019-15625038 | Msa0396790:intron | 35.0% | |
| ATTAAGATTGTTGCTCTCTC+TGG | - | chr3_2:15623942-15623961 | Msa0396790:CDS | 35.0% | |
| CTCGAAGTAGTCATTTAGAA+AGG | + | chr3_2:15624068-15624087 | None:intergenic | 35.0% | |
| CTTTCTAAATGACTACTTCG+AGG | - | chr3_2:15624066-15624085 | Msa0396790:CDS | 35.0% | |
| CCAATTAAACTAAACTCACC+GGG | + | chr3_2:15624102-15624121 | None:intergenic | 35.0% | |
| CATATTATATACAGGGGGTT+AGG | - | chr3_2:15624133-15624152 | Msa0396790:CDS | 35.0% | |
| CTGAGTGAATATTGTTTAGG+GGG | - | chr3_2:15624262-15624281 | Msa0396790:intron | 35.0% | |
| !! | AATTGCGGGTTTTAATAGGT+CGG | + | chr3_2:15624335-15624354 | None:intergenic | 35.0% |
| !! | TAAAACCCGCAATTTTAGGT+TGG | - | chr3_2:15624341-15624360 | Msa0396790:CDS | 35.0% |
| ! | CTTTTCCAACCTAAAATTGC+GGG | + | chr3_2:15624349-15624368 | None:intergenic | 35.0% |
| TTGAAATTAACCTGTCGGAT+AGG | - | chr3_2:15624369-15624388 | Msa0396790:CDS | 35.0% | |
| GTTTAATAAACCTATCCGAC+AGG | + | chr3_2:15624382-15624401 | None:intergenic | 35.0% | |
| TCAAGATCAGAGTTCAACAT+TGG | + | chr3_2:15624615-15624634 | None:intergenic | 35.0% | |
| AACTCTGATCTTGAGAAAGA+AGG | - | chr3_2:15624621-15624640 | Msa0396790:intron | 35.0% | |
| CAATCAATCGCATTCTTTAG+CGG | + | chr3_2:15624833-15624852 | None:intergenic | 35.0% | |
| GCTAAAGAATGCGATTGATT+GGG | - | chr3_2:15624832-15624851 | Msa0396790:intron | 35.0% | |
| AATACATCTAGGTAGAACTC+AGG | + | chr3_2:15624992-15625011 | None:intergenic | 35.0% | |
| CTGGATGCTTAAATACATCT+AGG | + | chr3_2:15625003-15625022 | None:intergenic | 35.0% | |
| ! | CCATCATCGTTACATTTTTC+TGG | + | chr3_2:15625022-15625041 | None:intergenic | 35.0% |
| CCAGAAAAATGTAACGATGA+TGG | - | chr3_2:15625019-15625038 | Msa0396790:intron | 35.0% | |
| ! | CGAAAAGCCTCTTTTCATAC+TGG | - | chr3_2:15623972-15623991 | Msa0396790:CDS | 40.0% |
| AATGAGGCCAGTATGAAAAG+AGG | + | chr3_2:15623982-15624001 | None:intergenic | 40.0% | |
| ! | CCCGGTGAGTTTAGTTTAAT+TGG | - | chr3_2:15624099-15624118 | Msa0396790:CDS | 40.0% |
| ! | TGAAAAAATAGGATGGTGGC+AGG | - | chr3_2:15624429-15624448 | Msa0396790:CDS | 40.0% |
| CGCTAAAGAATGCGATTGAT+TGG | - | chr3_2:15624831-15624850 | Msa0396790:intron | 40.0% | |
| ATCAAGACCACCAAATGCAT+GGG | - | chr3_2:15624856-15624875 | Msa0396790:intron | 40.0% | |
| CAACATCATCTTCGCCAAAT+CGG | - | chr3_2:15624935-15624954 | Msa0396790:intron | 40.0% | |
| AACATCATCTTCGCCAAATC+GGG | - | chr3_2:15624936-15624955 | Msa0396790:intron | 40.0% | |
| TATCAAGGAAAACCCCGATT+TGG | + | chr3_2:15624952-15624971 | None:intergenic | 40.0% | |
| ! | ATGTAACGATGATGGTGACT+TGG | - | chr3_2:15625027-15625046 | Msa0396790:intron | 40.0% |
| GAAAGTTCTTGTGTCCTTGA+AGG | - | chr3_2:15625078-15625097 | Msa0396790:CDS | 40.0% | |
| ! | CGAAAAGCCTCTTTTCATAC+TGG | - | chr3_2:15623972-15623991 | Msa0396790:CDS | 40.0% |
| AATGAGGCCAGTATGAAAAG+AGG | + | chr3_2:15623982-15624001 | None:intergenic | 40.0% | |
| ! | CCCGGTGAGTTTAGTTTAAT+TGG | - | chr3_2:15624099-15624118 | Msa0396790:CDS | 40.0% |
| ! | TGAAAAAATAGGATGGTGGC+AGG | - | chr3_2:15624429-15624448 | Msa0396790:CDS | 40.0% |
| CGCTAAAGAATGCGATTGAT+TGG | - | chr3_2:15624831-15624850 | Msa0396790:intron | 40.0% | |
| ATCAAGACCACCAAATGCAT+GGG | - | chr3_2:15624856-15624875 | Msa0396790:intron | 40.0% | |
| CAACATCATCTTCGCCAAAT+CGG | - | chr3_2:15624935-15624954 | Msa0396790:intron | 40.0% | |
| AACATCATCTTCGCCAAATC+GGG | - | chr3_2:15624936-15624955 | Msa0396790:intron | 40.0% | |
| TATCAAGGAAAACCCCGATT+TGG | + | chr3_2:15624952-15624971 | None:intergenic | 40.0% | |
| ! | ATGTAACGATGATGGTGACT+TGG | - | chr3_2:15625027-15625046 | Msa0396790:intron | 40.0% |
| GAAAGTTCTTGTGTCCTTGA+AGG | - | chr3_2:15625078-15625097 | Msa0396790:CDS | 40.0% | |
| ! | CATACTGGCCTCATTCGTTA+TGG | - | chr3_2:15623987-15624006 | Msa0396790:CDS | 45.0% |
| CTTCGAGGCTAATCAAATCC+CGG | - | chr3_2:15624081-15624100 | Msa0396790:CDS | 45.0% | |
| GGGAGAGAAGACACTAAGTA+GGG | - | chr3_2:15624282-15624301 | Msa0396790:intron | 45.0% | |
| GGAGAGAAGACACTAAGTAG+GGG | - | chr3_2:15624283-15624302 | Msa0396790:intron | 45.0% | |
| CTAAGTAGGGGTGGCAAAAT+AGG | - | chr3_2:15624295-15624314 | Msa0396790:intron | 45.0% | |
| CGAAAAGCTTCAACTTCAGC+TGG | + | chr3_2:15624654-15624673 | None:intergenic | 45.0% | |
| CATCAAGACCACCAAATGCA+TGG | - | chr3_2:15624855-15624874 | Msa0396790:intron | 45.0% | |
| ! | TTGAGCTTTTCCTCCACCAA+AGG | + | chr3_2:15624918-15624937 | None:intergenic | 45.0% |
| ACATCATCTTCGCCAAATCG+GGG | - | chr3_2:15624937-15624956 | Msa0396790:intron | 45.0% | |
| ! | CATACTGGCCTCATTCGTTA+TGG | - | chr3_2:15623987-15624006 | Msa0396790:CDS | 45.0% |
| CTTCGAGGCTAATCAAATCC+CGG | - | chr3_2:15624081-15624100 | Msa0396790:CDS | 45.0% | |
| GGGAGAGAAGACACTAAGTA+GGG | - | chr3_2:15624282-15624301 | Msa0396790:intron | 45.0% | |
| GGAGAGAAGACACTAAGTAG+GGG | - | chr3_2:15624283-15624302 | Msa0396790:intron | 45.0% | |
| CTAAGTAGGGGTGGCAAAAT+AGG | - | chr3_2:15624295-15624314 | Msa0396790:intron | 45.0% | |
| CGAAAAGCTTCAACTTCAGC+TGG | + | chr3_2:15624654-15624673 | None:intergenic | 45.0% | |
| CATCAAGACCACCAAATGCA+TGG | - | chr3_2:15624855-15624874 | Msa0396790:intron | 45.0% | |
| ! | TTGAGCTTTTCCTCCACCAA+AGG | + | chr3_2:15624918-15624937 | None:intergenic | 45.0% |
| ACATCATCTTCGCCAAATCG+GGG | - | chr3_2:15624937-15624956 | Msa0396790:intron | 45.0% | |
| GGGGAGAGAAGACACTAAGT+AGG | - | chr3_2:15624281-15624300 | Msa0396790:intron | 50.0% | |
| GAGAAGACACTAAGTAGGGG+TGG | - | chr3_2:15624286-15624305 | Msa0396790:intron | 50.0% | |
| GCAAAATAGGTCGAGCCTGT+CGG | - | chr3_2:15624308-15624327 | Msa0396790:intron | 50.0% | |
| CAAAATAGGTCGAGCCTGTC+GGG | - | chr3_2:15624309-15624328 | Msa0396790:intron | 50.0% | |
| ! | TTTTAATAGGTCGGCCCGAC+AGG | + | chr3_2:15624326-15624345 | None:intergenic | 50.0% |
| TTACCAGCCCATGCATTTGG+TGG | + | chr3_2:15624866-15624885 | None:intergenic | 50.0% | |
| GGTTTACCAGCCCATGCATT+TGG | + | chr3_2:15624869-15624888 | None:intergenic | 50.0% | |
| CCAACACTTACTATGGCAGC+AGG | + | chr3_2:15624890-15624909 | None:intergenic | 50.0% | |
| CCTGCTGCCATAGTAAGTGT+TGG | - | chr3_2:15624887-15624906 | Msa0396790:intron | 50.0% | |
| !! | GCTGCCATAGTAAGTGTTGG+AGG | - | chr3_2:15624890-15624909 | Msa0396790:intron | 50.0% |
| GGCTCCTCCAACACTTACTA+TGG | + | chr3_2:15624897-15624916 | None:intergenic | 50.0% | |
| !! | GTAAGTGTTGGAGGAGCCTT+TGG | - | chr3_2:15624899-15624918 | Msa0396790:intron | 50.0% |
| GGGGAGAGAAGACACTAAGT+AGG | - | chr3_2:15624281-15624300 | Msa0396790:intron | 50.0% | |
| GAGAAGACACTAAGTAGGGG+TGG | - | chr3_2:15624286-15624305 | Msa0396790:intron | 50.0% | |
| GCAAAATAGGTCGAGCCTGT+CGG | - | chr3_2:15624308-15624327 | Msa0396790:intron | 50.0% | |
| CAAAATAGGTCGAGCCTGTC+GGG | - | chr3_2:15624309-15624328 | Msa0396790:intron | 50.0% | |
| ! | TTTTAATAGGTCGGCCCGAC+AGG | + | chr3_2:15624326-15624345 | None:intergenic | 50.0% |
| TTACCAGCCCATGCATTTGG+TGG | + | chr3_2:15624866-15624885 | None:intergenic | 50.0% | |
| GGTTTACCAGCCCATGCATT+TGG | + | chr3_2:15624869-15624888 | None:intergenic | 50.0% | |
| CCAACACTTACTATGGCAGC+AGG | + | chr3_2:15624890-15624909 | None:intergenic | 50.0% | |
| CCTGCTGCCATAGTAAGTGT+TGG | - | chr3_2:15624887-15624906 | Msa0396790:intron | 50.0% | |
| !! | GCTGCCATAGTAAGTGTTGG+AGG | - | chr3_2:15624890-15624909 | Msa0396790:intron | 50.0% |
| GGCTCCTCCAACACTTACTA+TGG | + | chr3_2:15624897-15624916 | None:intergenic | 50.0% | |
| !! | GTAAGTGTTGGAGGAGCCTT+TGG | - | chr3_2:15624899-15624918 | Msa0396790:intron | 50.0% |
| AGACCACCAAATGCATGGGC+TGG | - | chr3_2:15624860-15624879 | Msa0396790:intron | 55.0% | |
| ! | AGTGTTGGAGGAGCCTTTGG+TGG | - | chr3_2:15624902-15624921 | Msa0396790:intron | 55.0% |
| AGACCACCAAATGCATGGGC+TGG | - | chr3_2:15624860-15624879 | Msa0396790:intron | 55.0% | |
| ! | AGTGTTGGAGGAGCCTTTGG+TGG | - | chr3_2:15624902-15624921 | Msa0396790:intron | 55.0% |
| GGGGGTTAGGGTTCGAAGCT+CGG | - | chr3_2:15624146-15624165 | Msa0396790:CDS | 60.0% | |
| GTTGGAGGAGCCTTTGGTGG+AGG | - | chr3_2:15624905-15624924 | Msa0396790:intron | 60.0% | |
| GGGGGTTAGGGTTCGAAGCT+CGG | - | chr3_2:15624146-15624165 | Msa0396790:CDS | 60.0% | |
| GTTGGAGGAGCCTTTGGTGG+AGG | - | chr3_2:15624905-15624924 | Msa0396790:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 15623930 | 15625132 | 15623930 | ID=Msa0396790;Name=Msa0396790 |
| chr3_2 | mRNA | 15623930 | 15625132 | 15623930 | ID=Msa0396790-mRNA-1;Parent=Msa0396790;Name=Msa0396790-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|3|0|191 |
| chr3_2 | exon | 15625054 | 15625132 | 15625054 | ID=Msa0396790-mRNA-1:exon:3518;Parent=Msa0396790-mRNA-1 |
| chr3_2 | exon | 15624324 | 15624515 | 15624324 | ID=Msa0396790-mRNA-1:exon:3517;Parent=Msa0396790-mRNA-1 |
| chr3_2 | exon | 15623930 | 15624234 | 15623930 | ID=Msa0396790-mRNA-1:exon:3516;Parent=Msa0396790-mRNA-1 |
| chr3_2 | CDS | 15625054 | 15625132 | 15625054 | ID=Msa0396790-mRNA-1:cds;Parent=Msa0396790-mRNA-1 |
| chr3_2 | CDS | 15624324 | 15624515 | 15624324 | ID=Msa0396790-mRNA-1:cds;Parent=Msa0396790-mRNA-1 |
| chr3_2 | CDS | 15623930 | 15624234 | 15623930 | ID=Msa0396790-mRNA-1:cds;Parent=Msa0396790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
