Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394500 | XP_003598326.1 | 98.554 | 484 | 7 | 0 | 1 | 484 | 1 | 484 | 0.0 | 999 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394500 | sp|Q9C9H5|GUN9_ARATH | 74.167 | 480 | 123 | 1 | 3 | 482 | 2 | 480 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394500 | G7IVD9 | 98.554 | 484 | 7 | 0 | 1 | 484 | 1 | 484 | 0.0 | 999 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0078160 | Msa0394500 | -0.806367 | 8.512514e-50 | -8.615850e-47 |
| Msa0080030 | Msa0394500 | 0.803428 | 3.503101e-49 | -8.615850e-47 |
| Msa0080820 | Msa0394500 | 0.806793 | 6.920693e-50 | -8.615850e-47 |
| Msa0130360 | Msa0394500 | 0.814154 | 1.780048e-51 | -8.615850e-47 |
| Msa0134830 | Msa0394500 | 0.804362 | 2.240437e-49 | -8.615850e-47 |
| Msa0173380 | Msa0394500 | 0.831180 | 1.931904e-55 | -8.615850e-47 |
| Msa0188560 | Msa0394500 | 0.808097 | 3.661089e-50 | -8.615850e-47 |
| Msa0206370 | Msa0394500 | 0.820722 | 5.902206e-53 | -8.615850e-47 |
| Msa0221180 | Msa0394500 | 0.834846 | 2.366918e-56 | -8.615850e-47 |
| Msa0223040 | Msa0394500 | 0.808532 | 2.957531e-50 | -8.615850e-47 |
| Msa0230920 | Msa0394500 | 0.820302 | 7.369925e-53 | -8.615850e-47 |
| Msa0372100 | Msa0394500 | 0.804960 | 1.680404e-49 | -8.615850e-47 |
| Msa0394500 | Msa0418870 | 0.802091 | 6.614429e-49 | -8.615850e-47 |
| Msa0394500 | Msa0424940 | -0.803963 | 2.712337e-49 | -8.615850e-47 |
| Msa0394500 | Msa0432200 | 0.801560 | 8.500465e-49 | -8.615850e-47 |
| Msa0394500 | Msa0442090 | 0.984078 | 1.585804e-159 | -8.615850e-47 |
| Msa0394500 | Msa0463820 | -0.813407 | 2.600422e-51 | -8.615850e-47 |
| Msa0394500 | Msa0480900 | -0.817866 | 2.639868e-52 | -8.615850e-47 |
| Msa0394500 | Msa0481670 | 0.832409 | 9.612551e-56 | -8.615850e-47 |
| Msa0394500 | Msa0498610 | 0.812810 | 3.515121e-51 | -8.615850e-47 |
| Msa0394500 | Msa0521060 | 0.801989 | 6.939416e-49 | -8.615850e-47 |
| Msa0394500 | Msa0557850 | 0.807662 | 4.531252e-50 | -8.615850e-47 |
| Msa0394500 | Msa0574660 | 0.808519 | 2.976946e-50 | -8.615850e-47 |
| Msa0394500 | Msa0612520 | 0.803579 | 3.259485e-49 | -8.615850e-47 |
| Msa0394500 | Msa0620900 | 0.809718 | 1.647789e-50 | -8.615850e-47 |
| Msa0394500 | Msa0657710 | 0.803312 | 3.701424e-49 | -8.615850e-47 |
| Msa0394500 | Msa0660090 | 0.821612 | 3.681346e-53 | -8.615850e-47 |
| Msa0394500 | Msa0662230 | -0.802365 | 5.808963e-49 | -8.615850e-47 |
| Msa0394500 | Msa0667680 | -0.812832 | 3.476249e-51 | -8.615850e-47 |
| Msa0394500 | Msa0685610 | 0.800197 | 1.613502e-48 | -8.615850e-47 |
| Msa0394500 | Msa0714230 | -0.804433 | 2.165286e-49 | -8.615850e-47 |
| Msa0394500 | Msa0722730 | 0.810015 | 1.421885e-50 | -8.615850e-47 |
| Msa0394500 | Msa0734700 | 0.828931 | 6.831691e-55 | -8.615850e-47 |
| Msa0394500 | Msa0736920 | 0.810493 | 1.121595e-50 | -8.615850e-47 |
| Msa0394500 | Msa0755480 | -0.802510 | 5.421359e-49 | -8.615850e-47 |
| Msa0394500 | Msa0778570 | 0.805585 | 1.243212e-49 | -8.615850e-47 |
| Msa0394500 | Msa0813610 | 0.815388 | 9.485743e-52 | -8.615850e-47 |
| Msa0394500 | Msa0840540 | 0.802604 | 5.184091e-49 | -8.615850e-47 |
| Msa0394500 | Msa0846870 | 0.810225 | 1.281203e-50 | -8.615850e-47 |
| Msa0394500 | Msa0847140 | 0.802192 | 6.304613e-49 | -8.615850e-47 |
| Msa0394500 | Msa0854230 | 0.810599 | 1.064162e-50 | -8.615850e-47 |
| Msa0394500 | Msa0876630 | 0.822832 | 1.917778e-53 | -8.615850e-47 |
| Msa0394500 | Msa0903570 | -0.809046 | 2.296199e-50 | -8.615850e-47 |
| Msa0394500 | Msa0908250 | -0.800546 | 1.369896e-48 | -8.615850e-47 |
| Msa0394500 | Msa0908290 | -0.803307 | 3.711590e-49 | -8.615850e-47 |
| Msa0394500 | Msa0908300 | -0.801395 | 9.186273e-49 | -8.615850e-47 |
| Msa0394500 | Msa0908710 | -0.801792 | 7.618517e-49 | -8.615850e-47 |
| Msa0394500 | Msa0909260 | 0.804237 | 2.378942e-49 | -8.615850e-47 |
| Msa0394500 | Msa0941150 | -0.800912 | 1.153416e-48 | -8.615850e-47 |
| Msa0394500 | Msa0978980 | 0.836544 | 8.796464e-57 | -8.615850e-47 |
| Msa0394500 | Msa1019420 | 0.820995 | 5.109127e-53 | -8.615850e-47 |
| Msa0394500 | Msa1040330 | 0.806405 | 8.360167e-50 | -8.615850e-47 |
| Msa0394500 | Msa1042300 | 0.843555 | 1.304115e-58 | -8.615850e-47 |
| Msa0394500 | Msa1046120 | 0.807846 | 4.140632e-50 | -8.615850e-47 |
| Msa0394500 | Msa1052730 | 0.819587 | 1.074177e-52 | -8.615850e-47 |
| Msa0394500 | Msa1086580 | -0.801429 | 9.042711e-49 | -8.615850e-47 |
| Msa0394500 | Msa1086780 | -0.801079 | 1.066271e-48 | -8.615850e-47 |
| Msa0394500 | Msa1086950 | -0.801278 | 9.711021e-49 | -8.615850e-47 |
| Msa0394500 | Msa1087060 | -0.802380 | 5.767451e-49 | -8.615850e-47 |
| Msa0394500 | Msa1087100 | -0.802257 | 6.111581e-49 | -8.615850e-47 |
| Msa0394500 | Msa1091050 | 0.807257 | 5.522178e-50 | -8.615850e-47 |
| Msa0394500 | Msa1093340 | 0.801619 | 8.265879e-49 | -8.615850e-47 |
| Msa0394500 | Msa1111910 | 0.822230 | 2.646897e-53 | -8.615850e-47 |
| Msa0394500 | Msa1130780 | 0.841729 | 3.982533e-58 | -8.615850e-47 |
| Msa0394500 | Msa1136970 | -0.813008 | 3.181197e-51 | -8.615850e-47 |
| Msa0394500 | Msa1154320 | 0.824157 | 9.399907e-54 | -8.615850e-47 |
| Msa0394500 | Msa1192360 | 0.810579 | 1.074638e-50 | -8.615850e-47 |
| Msa0394500 | Msa1220720 | 0.816029 | 6.826661e-52 | -8.615850e-47 |
| Msa0394500 | Msa1231440 | 0.849161 | 3.861582e-60 | -8.615850e-47 |
| Msa0394500 | Msa1242130 | 0.808627 | 2.822711e-50 | -8.615850e-47 |
| Msa0394500 | Msa1242160 | 0.815756 | 7.852627e-52 | -8.615850e-47 |
| Msa0394500 | Msa1246830 | 0.833078 | 6.556952e-56 | -8.615850e-47 |
| Msa0394500 | Msa1250610 | 0.803315 | 3.696828e-49 | -8.615850e-47 |
| Msa0394500 | Msa1255710 | 0.810915 | 9.090707e-51 | -8.615850e-47 |
| Msa0394500 | Msa1265570 | 0.833833 | 4.249408e-56 | -8.615850e-47 |
| Msa0394500 | Msa1278000 | 0.848656 | 5.334067e-60 | -8.615850e-47 |
| Msa0394500 | Msa1283930 | 0.807255 | 5.527598e-50 | -8.615850e-47 |
| Msa0394500 | Msa1283960 | 0.819958 | 8.837600e-53 | -8.615850e-47 |
| Msa0394500 | Msa1288070 | 0.828186 | 1.034122e-54 | -8.615850e-47 |
| Msa0394500 | Msa1290090 | -0.804064 | 2.584531e-49 | -8.615850e-47 |
| Msa0394500 | Msa1296860 | 0.813486 | 2.498614e-51 | -8.615850e-47 |
| Msa0394500 | Msa1322960 | 0.809293 | 2.032644e-50 | -8.615850e-47 |
| Msa0394500 | Msa1326640 | 0.808362 | 3.214217e-50 | -8.615850e-47 |
| Msa0394500 | Msa1326680 | 0.801688 | 8.003033e-49 | -8.615850e-47 |
| Msa0394500 | Msa1334670 | 0.831436 | 1.670951e-55 | -8.615850e-47 |
| Msa0394500 | Msa1341750 | 0.827245 | 1.740029e-54 | -8.615850e-47 |
| Msa0394500 | Msa1343600 | 0.812483 | 4.144104e-51 | -8.615850e-47 |
| Msa0394500 | Msa1354540 | -0.802720 | 4.907170e-49 | -8.615850e-47 |
| Msa0394500 | Msa1354670 | -0.804211 | 2.408986e-49 | -8.615850e-47 |
| Msa0394500 | Msa1354800 | -0.800686 | 1.282815e-48 | -8.615850e-47 |
| Msa0394500 | Msa1362590 | 0.807683 | 4.484128e-50 | -8.615850e-47 |
| Msa0394500 | Msa1365230 | 0.832901 | 7.257482e-56 | -8.615850e-47 |
| Msa0394500 | Msa1368250 | -0.800572 | 1.353385e-48 | -8.615850e-47 |
| Msa0394500 | Msa1387100 | -0.803714 | 3.055210e-49 | -8.615850e-47 |
| Msa0394500 | Msa1389820 | 0.801240 | 9.884783e-49 | -8.615850e-47 |
| Msa0394500 | Msa1417220 | 0.817325 | 3.495667e-52 | -8.615850e-47 |
| Msa0394500 | Msa1417370 | 0.806558 | 7.761703e-50 | -8.615850e-47 |
| Msa0394500 | Msa1417930 | 0.831297 | 1.808329e-55 | -8.615850e-47 |
| Msa0394500 | Msa1445530 | 0.810687 | 1.018182e-50 | -8.615850e-47 |
| Msa0394500 | Msa1450290 | 0.800149 | 1.650534e-48 | -8.615850e-47 |
| Msa0394500 | Msa1456040 | 0.802056 | 6.724644e-49 | -8.615850e-47 |
| Msa0394500 | Msa1463640 | 0.817907 | 2.584137e-52 | -8.615850e-47 |
| Msa0262750 | Msa0394500 | 0.830387 | 3.022705e-55 | -8.615850e-47 |
| Msa0264230 | Msa0394500 | 0.821345 | 4.242889e-53 | -8.615850e-47 |
| Msa0268290 | Msa0394500 | -0.808812 | 2.576496e-50 | -8.615850e-47 |
| Msa0284800 | Msa0394500 | 0.819508 | 1.119611e-52 | -8.615850e-47 |
| Msa0300470 | Msa0394500 | 0.839025 | 2.027608e-57 | -8.615850e-47 |
| Msa0336430 | Msa0394500 | 0.827090 | 1.895613e-54 | -8.615850e-47 |
| Msa0336460 | Msa0394500 | 0.825583 | 4.330282e-54 | -8.615850e-47 |
| Msa0336520 | Msa0394500 | 0.825741 | 3.972836e-54 | -8.615850e-47 |
| Msa0337970 | Msa0394500 | 0.830588 | 2.698205e-55 | -8.615850e-47 |
| Msa0347780 | Msa0394500 | 0.934214 | 5.708059e-96 | -8.615850e-47 |
| Msa0359010 | Msa0394500 | 0.803019 | 4.256579e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394500 | MtrunA17_Chr3g0080171 | 98.554 | 484 | 7 | 0 | 1 | 484 | 1 | 484 | 0.0 | 999 |
| Msa0394500 | MtrunA17_Chr3g0119821 | 58.658 | 462 | 186 | 2 | 25 | 482 | 35 | 495 | 0.0 | 552 |
| Msa0394500 | MtrunA17_Chr1g0195271 | 59.653 | 461 | 180 | 3 | 25 | 481 | 39 | 497 | 0.0 | 548 |
| Msa0394500 | MtrunA17_Chr3g0145261 | 57.082 | 466 | 191 | 5 | 25 | 483 | 24 | 487 | 0.0 | 532 |
| Msa0394500 | MtrunA17_Chr8g0391391 | 55.699 | 465 | 199 | 5 | 25 | 483 | 30 | 493 | 0.0 | 518 |
| Msa0394500 | MtrunA17_Chr4g0018301 | 53.728 | 456 | 208 | 3 | 25 | 480 | 45 | 497 | 1.97e-172 | 494 |
| Msa0394500 | MtrunA17_Chr4g0018361 | 52.977 | 487 | 211 | 9 | 8 | 480 | 7 | 489 | 6.76e-171 | 490 |
| Msa0394500 | MtrunA17_Chr5g0397201 | 49.367 | 474 | 229 | 6 | 15 | 484 | 30 | 496 | 1.18e-156 | 454 |
| Msa0394500 | MtrunA17_Chr8g0388051 | 47.669 | 472 | 231 | 8 | 25 | 484 | 28 | 495 | 3.53e-143 | 424 |
| Msa0394500 | MtrunA17_Chr3g0119371 | 45.585 | 487 | 248 | 8 | 6 | 480 | 24 | 505 | 1.06e-141 | 417 |
| Msa0394500 | MtrunA17_Chr5g0439311 | 43.952 | 496 | 253 | 10 | 1 | 480 | 10 | 496 | 4.01e-140 | 412 |
| Msa0394500 | MtrunA17_Chr1g0164201 | 46.694 | 484 | 246 | 8 | 4 | 481 | 5 | 482 | 9.14e-139 | 408 |
| Msa0394500 | MtrunA17_Chr3g0086311 | 44.676 | 479 | 251 | 6 | 9 | 481 | 10 | 480 | 8.15e-132 | 390 |
| Msa0394500 | MtrunA17_Chr4g0038131 | 46.368 | 468 | 232 | 10 | 25 | 478 | 28 | 490 | 1.70e-126 | 382 |
| Msa0394500 | MtrunA17_Chr5g0397181 | 46.633 | 401 | 203 | 6 | 86 | 482 | 1 | 394 | 1.80e-121 | 361 |
| Msa0394500 | MtrunA17_Chr3g0142501 | 41.667 | 468 | 249 | 10 | 26 | 478 | 58 | 516 | 1.16e-111 | 340 |
| Msa0394500 | MtrunA17_Chr8g0372031 | 42.766 | 470 | 245 | 12 | 24 | 478 | 62 | 522 | 1.29e-107 | 330 |
| Msa0394500 | MtrunA17_Chr3g0136381 | 43.889 | 360 | 193 | 4 | 20 | 377 | 25 | 377 | 2.54e-104 | 318 |
| Msa0394500 | MtrunA17_Chr4g0018341 | 51.264 | 277 | 133 | 2 | 204 | 480 | 2 | 276 | 2.80e-94 | 287 |
| Msa0394500 | MtrunA17_Chr2g0291461 | 42.137 | 496 | 236 | 18 | 25 | 483 | 111 | 592 | 8.05e-94 | 296 |
| Msa0394500 | MtrunA17_Chr4g0022271 | 95.000 | 140 | 2 | 1 | 324 | 463 | 20 | 154 | 2.27e-90 | 273 |
| Msa0394500 | MtrunA17_Chr3g0120661 | 40.535 | 486 | 243 | 19 | 25 | 477 | 116 | 588 | 3.88e-90 | 287 |
| Msa0394500 | MtrunA17_Chr5g0444721 | 42.857 | 371 | 197 | 6 | 122 | 478 | 193 | 562 | 2.95e-88 | 281 |
| Msa0394500 | MtrunA17_Chr5g0444721 | 42.286 | 175 | 93 | 4 | 4 | 171 | 12 | 185 | 3.79e-32 | 129 |
| Msa0394500 | MtrunA17_Chr3g0126111 | 34.766 | 512 | 282 | 17 | 6 | 477 | 81 | 580 | 1.86e-81 | 264 |
| Msa0394500 | MtrunA17_Chr4g0018351 | 59.459 | 185 | 74 | 1 | 25 | 209 | 30 | 213 | 1.40e-67 | 216 |
| Msa0394500 | MtrunA17_Chr7g0269571 | 56.213 | 169 | 62 | 2 | 324 | 481 | 43 | 210 | 7.22e-62 | 201 |
| Msa0394500 | MtrunA17_Chr1g0164181 | 44.910 | 167 | 91 | 1 | 312 | 478 | 164 | 329 | 5.60e-40 | 147 |
| Msa0394500 | MtrunA17_Chr1g0164181 | 46.632 | 193 | 97 | 4 | 67 | 257 | 3 | 191 | 1.82e-35 | 134 |
| Msa0394500 | MtrunA17_Chr4g0072811 | 37.805 | 164 | 96 | 4 | 316 | 477 | 3 | 162 | 4.84e-26 | 105 |
| Msa0394500 | MtrunA17_Chr3g0136371 | 48.936 | 94 | 47 | 1 | 377 | 470 | 1 | 93 | 1.79e-21 | 89.4 |
| Msa0394500 | MtrunA17_Chr7g0269561 | 39.130 | 92 | 38 | 2 | 234 | 321 | 25 | 102 | 7.25e-13 | 65.5 |
| Msa0394500 | MtrunA17_Chr5g0397171 | 61.538 | 39 | 15 | 0 | 25 | 63 | 41 | 79 | 2.75e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394500 | AT1G71380.1 | 74.167 | 480 | 123 | 1 | 3 | 482 | 2 | 480 | 0.0 | 736 |
| Msa0394500 | AT1G22880.1 | 72.878 | 483 | 129 | 2 | 1 | 483 | 1 | 481 | 0.0 | 712 |
| Msa0394500 | AT1G22880.2 | 73.367 | 398 | 105 | 1 | 86 | 483 | 1 | 397 | 0.0 | 606 |
| Msa0394500 | AT4G02290.1 | 61.207 | 464 | 174 | 3 | 22 | 481 | 49 | 510 | 0.0 | 575 |
| Msa0394500 | AT1G02800.1 | 61.605 | 461 | 169 | 4 | 25 | 481 | 43 | 499 | 0.0 | 568 |
| Msa0394500 | AT1G70710.1 | 55.828 | 489 | 208 | 5 | 2 | 484 | 3 | 489 | 0.0 | 548 |
| Msa0394500 | AT1G23210.1 | 55.000 | 480 | 210 | 3 | 8 | 483 | 11 | 488 | 0.0 | 535 |
| Msa0394500 | AT4G39010.1 | 53.863 | 466 | 207 | 4 | 25 | 483 | 29 | 493 | 5.93e-179 | 511 |
| Msa0394500 | AT4G02290.2 | 60.750 | 400 | 151 | 3 | 86 | 481 | 1 | 398 | 1.86e-169 | 483 |
| Msa0394500 | AT1G22880.3 | 75.000 | 324 | 80 | 1 | 1 | 324 | 1 | 323 | 8.40e-169 | 479 |
| Msa0394500 | AT4G39000.1 | 47.143 | 490 | 251 | 4 | 1 | 483 | 1 | 489 | 1.48e-156 | 454 |
| Msa0394500 | AT4G23560.1 | 50.418 | 478 | 224 | 8 | 5 | 478 | 4 | 472 | 2.99e-154 | 447 |
| Msa0394500 | AT4G09740.1 | 49.687 | 479 | 226 | 9 | 5 | 478 | 4 | 472 | 4.64e-150 | 437 |
| Msa0394500 | AT4G38990.2 | 45.679 | 486 | 251 | 5 | 10 | 483 | 8 | 492 | 1.23e-147 | 431 |
| Msa0394500 | AT2G32990.1 | 45.621 | 491 | 248 | 8 | 5 | 478 | 14 | 502 | 3.67e-143 | 421 |
| Msa0394500 | AT4G11050.2 | 47.109 | 467 | 229 | 8 | 25 | 478 | 26 | 487 | 1.38e-140 | 415 |
| Msa0394500 | AT4G11050.3 | 47.109 | 467 | 229 | 8 | 25 | 478 | 26 | 487 | 5.54e-140 | 416 |
| Msa0394500 | AT4G11050.1 | 47.109 | 467 | 229 | 8 | 25 | 478 | 26 | 487 | 6.57e-140 | 416 |
| Msa0394500 | AT1G64390.1 | 47.425 | 466 | 229 | 8 | 25 | 478 | 25 | 486 | 9.32e-139 | 413 |
| Msa0394500 | AT3G43860.2 | 45.175 | 487 | 253 | 6 | 2 | 482 | 7 | 485 | 1.30e-138 | 408 |
| Msa0394500 | AT3G43860.1 | 45.175 | 487 | 253 | 6 | 2 | 482 | 7 | 485 | 1.30e-138 | 408 |
| Msa0394500 | AT4G39010.2 | 51.811 | 359 | 166 | 3 | 25 | 376 | 29 | 387 | 2.10e-133 | 391 |
| Msa0394500 | AT2G44540.1 | 44.444 | 477 | 255 | 7 | 8 | 478 | 16 | 488 | 9.15e-133 | 393 |
| Msa0394500 | AT2G44570.1 | 45.455 | 484 | 249 | 9 | 5 | 481 | 17 | 492 | 5.53e-132 | 391 |
| Msa0394500 | AT2G44550.1 | 44.351 | 478 | 255 | 7 | 6 | 478 | 16 | 487 | 6.63e-131 | 388 |
| Msa0394500 | AT2G44560.1 | 44.764 | 487 | 256 | 8 | 1 | 481 | 12 | 491 | 1.54e-126 | 377 |
| Msa0394500 | AT1G48930.1 | 45.708 | 466 | 237 | 7 | 25 | 478 | 30 | 491 | 2.57e-118 | 360 |
| Msa0394500 | AT1G75680.1 | 45.295 | 457 | 230 | 10 | 26 | 471 | 58 | 505 | 7.01e-117 | 353 |
| Msa0394500 | AT1G19940.2 | 42.857 | 462 | 244 | 10 | 25 | 475 | 48 | 500 | 3.05e-116 | 352 |
| Msa0394500 | AT1G19940.1 | 42.857 | 462 | 244 | 10 | 25 | 475 | 48 | 500 | 3.05e-116 | 352 |
| Msa0394500 | AT5G49720.1 | 40.351 | 513 | 257 | 17 | 7 | 482 | 88 | 588 | 7.85e-90 | 286 |
| Msa0394500 | AT2G44570.2 | 42.785 | 395 | 211 | 9 | 5 | 392 | 17 | 403 | 1.63e-89 | 279 |
| Msa0394500 | AT4G38990.1 | 42.450 | 351 | 174 | 3 | 10 | 355 | 8 | 335 | 2.53e-89 | 277 |
| Msa0394500 | AT4G24260.1 | 38.491 | 517 | 271 | 17 | 1 | 482 | 84 | 588 | 2.31e-86 | 278 |
| Msa0394500 | AT1G65610.1 | 37.743 | 514 | 268 | 22 | 4 | 478 | 88 | 588 | 5.41e-84 | 271 |
| Msa0394500 | AT1G19940.3 | 42.033 | 364 | 196 | 8 | 25 | 377 | 48 | 407 | 2.01e-83 | 264 |
| Msa0394500 | AT4G24260.3 | 38.660 | 388 | 196 | 15 | 25 | 377 | 108 | 488 | 4.16e-52 | 184 |
| Msa0394500 | AT4G24260.2 | 40.252 | 318 | 153 | 12 | 25 | 310 | 108 | 420 | 2.82e-49 | 175 |
Find 130 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACAGTTCTCAAGGTATT+TGG | 0.188395 | 3_2:+9137415 | None:intergenic |
| ATGGCTCCAACCAATATATT+AGG | 0.202587 | 3_2:+9137123 | None:intergenic |
| TGCTGTTAAATACTACAATT+TGG | 0.250375 | 3_2:-9138060 | Msa0394500:CDS |
| CTACAATTTGGCCAAGTCTT+TGG | 0.251872 | 3_2:-9138048 | Msa0394500:CDS |
| CCAAGAAGTCATAAAGTAAA+AGG | 0.277546 | 3_2:-9140947 | None:intergenic |
| CCAGAATATGAGCAATAAAA+TGG | 0.291892 | 3_2:+9138473 | None:intergenic |
| TACAATTTGGCCAAGTCTTT+GGG | 0.295167 | 3_2:-9138047 | Msa0394500:CDS |
| TTTCAGGTAGACTATATATT+AGG | 0.296374 | 3_2:-9137306 | Msa0394500:intron |
| CTGGTTTGGACCTCCAACTA+TGG | 0.301617 | 3_2:+9137104 | None:intergenic |
| GCCAAAGCTTCTCTATAGTT+TGG | 0.312895 | 3_2:+9140829 | None:intergenic |
| GTTACTTCTTACATGCTTGC+TGG | 0.313758 | 3_2:-9140875 | Msa0394500:CDS |
| CAACATTTGTGATCAACATT+TGG | 0.314931 | 3_2:+9138728 | None:intergenic |
| TTATCCCAGCTGAAGATATC+AGG | 0.329473 | 3_2:+9138011 | None:intergenic |
| CTCCATTTGATTTGTTGGTC+AGG | 0.329552 | 3_2:+9140760 | None:intergenic |
| TGGATCTCCATTTGATTTGT+TGG | 0.349293 | 3_2:+9140755 | None:intergenic |
| TGAATCCTCTTGGGAAAATA+TGG | 0.350676 | 3_2:+9137243 | None:intergenic |
| TCATGGAGCACAATTGAATA+TGG | 0.352249 | 3_2:-9138866 | Msa0394500:CDS |
| GAATCAGAACCCTAATATAT+TGG | 0.355685 | 3_2:-9137133 | Msa0394500:CDS |
| CTCTATAGTTTGGTTTGCAT+TGG | 0.357894 | 3_2:+9140839 | None:intergenic |
| AATCTAACATTAATTGTTAC+CGG | 0.359003 | 3_2:+9136987 | None:intergenic |
| ATCAAATGGAGATCCAATTC+TGG | 0.361824 | 3_2:-9140748 | Msa0394500:CDS |
| TCCACTTAGAATGTCCTATA+TGG | 0.366931 | 3_2:-9137277 | Msa0394500:CDS |
| TACAACCTATTCCAAGTATA+TGG | 0.367719 | 3_2:-9137482 | Msa0394500:CDS |
| ATTATGCTCACTGGTTGTCT+TGG | 0.376869 | 3_2:+9140919 | None:intergenic |
| TAGGGTTCTGATTCATTGAA+TGG | 0.377070 | 3_2:+9137142 | None:intergenic |
| CATCAGGAAATCCGTCGTTC+TGG | 0.380884 | 3_2:+9137085 | None:intergenic |
| CTTTGTAGCTGCCATATACT+TGG | 0.384398 | 3_2:+9137471 | None:intergenic |
| GGAAATCCGTCGTTCTGGTT+TGG | 0.384940 | 3_2:+9137090 | None:intergenic |
| TACATCAATGGTGGGATTGT+TGG | 0.387929 | 3_2:-9137027 | Msa0394500:CDS |
| ACCATCGGACATGCCAGAAT+TGG | 0.391790 | 3_2:+9140735 | None:intergenic |
| GCTCTTGCTTCTTTCATTTG+TGG | 0.396038 | 3_2:+9138830 | None:intergenic |
| GAGGGAGCCTTCCTGACCTC+TGG | 0.398809 | 3_2:+9140782 | None:intergenic |
| TTCAGCAGCAACATCAGAAC+CGG | 0.401931 | 3_2:+9138646 | None:intergenic |
| TTTGGTAGACATCCCTTTGT+TGG | 0.410383 | 3_2:+9136898 | None:intergenic |
| TCCTCTGTGGTGAATCCTCT+TGG | 0.412922 | 3_2:+9137233 | None:intergenic |
| TTATGCTCACTGGTTGTCTT+GGG | 0.413093 | 3_2:+9140920 | None:intergenic |
| TTGGTAGACATCCCTTTGTT+GGG | 0.413690 | 3_2:+9136899 | None:intergenic |
| TCTTCACAGTAATAACATAA+AGG | 0.414916 | 3_2:-9136649 | Msa0394500:three_prime_UTR |
| ACACCGACATAGAGTCTTCC+AGG | 0.415923 | 3_2:+9138758 | None:intergenic |
| CTATAGTCACCGCGATCATC+AGG | 0.416806 | 3_2:+9137069 | None:intergenic |
| CAGTTTGCTTTGCAGTATCA+AGG | 0.418073 | 3_2:-9138530 | Msa0394500:CDS |
| CCACCATTGATGTAAGTTGC+TGG | 0.419287 | 3_2:+9137036 | None:intergenic |
| TTGCTCATATTCTGGATTCA+AGG | 0.420522 | 3_2:-9138465 | Msa0394500:intron |
| TGGCTCCAACCAATATATTA+GGG | 0.420525 | 3_2:+9137124 | None:intergenic |
| GGACCTTTAGCGTACTTTGC+CGG | 0.422505 | 3_2:-9137006 | Msa0394500:CDS |
| ACATACTGAAGATTGCTTGC+AGG | 0.422983 | 3_2:+9137526 | None:intergenic |
| CTAACAGTGTCCATATCTTC+TGG | 0.423308 | 3_2:+9138698 | None:intergenic |
| ACCAAACTATAGAGAAGCTT+TGG | 0.423724 | 3_2:-9140830 | Msa0394500:CDS |
| TTGGGAAAGACCAGAAGATA+TGG | 0.432588 | 3_2:-9138708 | Msa0394500:CDS |
| CAAATGTTGATCACAAATGT+TGG | 0.436805 | 3_2:-9138727 | Msa0394500:CDS |
| TGTAGTTGAAGAGGGTGAAT+TGG | 0.441166 | 3_2:+9137778 | None:intergenic |
| ATGTCCTATATGGTAGGTTA+TGG | 0.445656 | 3_2:-9137267 | Msa0394500:CDS |
| TCAGTTCATCCACAGACAAT+AGG | 0.447266 | 3_2:-9137192 | Msa0394500:CDS |
| CTCCTGACCAACAAATCAAA+TGG | 0.448231 | 3_2:-9140762 | Msa0394500:CDS |
| AGCTGCCATATACTTGGAAT+AGG | 0.451707 | 3_2:+9137477 | None:intergenic |
| ATATTGGTTGGAGCCATAGT+TGG | 0.454285 | 3_2:-9137117 | Msa0394500:CDS |
| AATTGAATATGGAAAGAGAA+TGG | 0.462216 | 3_2:-9138855 | Msa0394500:CDS |
| ATCAACCTGATATCTTCAGC+TGG | 0.462559 | 3_2:-9138016 | Msa0394500:CDS |
| AACAAAAGCTTAGAATAAGT+TGG | 0.464270 | 3_2:+9138575 | None:intergenic |
| AAATGTTGATCACAAATGTT+GGG | 0.467634 | 3_2:-9138726 | Msa0394500:CDS |
| TCTTCAGGATGAACTATTGT+GGG | 0.468517 | 3_2:-9138111 | Msa0394500:intron |
| GTGCACATGTCCTTCTCTCA+AGG | 0.474161 | 3_2:-9137977 | Msa0394500:CDS |
| TGGACCATAACCTACCATAT+AGG | 0.476059 | 3_2:+9137263 | None:intergenic |
| ATTGAATATGGAAAGAGAAT+GGG | 0.486477 | 3_2:-9138854 | Msa0394500:CDS |
| GAAGTTCTCATTATGCTCAC+TGG | 0.489573 | 3_2:+9140910 | None:intergenic |
| ATTGTTGTTGTGAATGCCAT+TGG | 0.494336 | 3_2:+9138893 | None:intergenic |
| AATAAAGACGAATGCAAAGA+TGG | 0.498098 | 3_2:+9136691 | None:intergenic |
| ATTTGATTTGTTGGTCAGGA+GGG | 0.500109 | 3_2:+9140764 | None:intergenic |
| ACAGGAGGCTATTATGATGC+AGG | 0.500795 | 3_2:-9138938 | Msa0394500:CDS |
| ATCTGTGGCGTGGCGAATTG+CGG | 0.500987 | 3_2:+9138808 | None:intergenic |
| CATTTGATTTGTTGGTCAGG+AGG | 0.504546 | 3_2:+9140763 | None:intergenic |
| CCTCTGTGGTGAATCCTCTT+GGG | 0.506991 | 3_2:+9137234 | None:intergenic |
| TCACAACAACAATGTTATCA+TGG | 0.509771 | 3_2:-9138883 | Msa0394500:CDS |
| CAGAACCCTAATATATTGGT+TGG | 0.511456 | 3_2:-9137129 | Msa0394500:CDS |
| TAGATTTGACTTTGATAGCA+AGG | 0.518793 | 3_2:-9136970 | Msa0394500:three_prime_UTR |
| ATCTTCAGGATGAACTATTG+TGG | 0.519125 | 3_2:-9138112 | Msa0394500:intron |
| ATCATCAGCTCCCAAAGACT+TGG | 0.531480 | 3_2:+9138037 | None:intergenic |
| GTAGTTGAAGAGGGTGAATT+GGG | 0.534837 | 3_2:+9137779 | None:intergenic |
| TACATCGGCAAGGCGACCAT+CGG | 0.538069 | 3_2:+9140720 | None:intergenic |
| AACTGCTGCTGCACTTGCTG+CGG | 0.539280 | 3_2:-9138624 | Msa0394500:CDS |
| ATAAGAACTTTGATCAGTAT+AGG | 0.541520 | 3_2:-9137835 | Msa0394500:CDS |
| TATGTATCTTCAAACAATCC+CGG | 0.544424 | 3_2:-9138665 | Msa0394500:CDS |
| TTGGTTGGAGCCATAGTTGG+AGG | 0.545842 | 3_2:-9137114 | Msa0394500:CDS |
| CTACAGAGAGCATTGCTGAA+TGG | 0.545991 | 3_2:-9137860 | Msa0394500:intron |
| TCTCATCTCTACCCAACAAA+GGG | 0.546034 | 3_2:-9136910 | Msa0394500:three_prime_UTR |
| CCACAGACAATAGGATGTGA+TGG | 0.547733 | 3_2:-9137183 | Msa0394500:CDS |
| GAACCAGCAACTTACATCAA+TGG | 0.548177 | 3_2:-9137039 | Msa0394500:CDS |
| CAGATGGTGGTGGACTATGA+AGG | 0.548948 | 3_2:-9136868 | Msa0394500:three_prime_UTR |
| AGCTGGGATAACAAATATGC+TGG | 0.549315 | 3_2:-9137999 | Msa0394500:CDS |
| GAGAACTGTTGCGAAAAGAC+AGG | 0.553255 | 3_2:-9137404 | Msa0394500:intron |
| TCCAATTCTGGCATGTCCGA+TGG | 0.555287 | 3_2:-9140736 | Msa0394500:CDS |
| GGAAGACTCTATGTCGGTGT+TGG | 0.560843 | 3_2:-9138755 | Msa0394500:CDS |
| TTCAACTTACCCTTGAGAGA+AGG | 0.570746 | 3_2:+9137967 | None:intergenic |
| TTGCAGGTGGATTTGACAGG+AGG | 0.571495 | 3_2:-9138953 | Msa0394500:intron |
| TTACCGGCAAAGTACGCTAA+AGG | 0.575384 | 3_2:+9137003 | None:intergenic |
| GTAAAACATAGTAAAGATGT+TGG | 0.575502 | 3_2:+9136780 | None:intergenic |
| CTTAGAATGTCCTATATGGT+AGG | 0.578425 | 3_2:-9137273 | Msa0394500:CDS |
| TTTGTTGAGGACTTCACAGA+AGG | 0.583258 | 3_2:-9138558 | Msa0394500:CDS |
| ACCATATAGGACATTCTAAG+TGG | 0.589608 | 3_2:+9137276 | None:intergenic |
| GTCTCATCTCTACCCAACAA+AGG | 0.590435 | 3_2:-9136911 | Msa0394500:three_prime_UTR |
| AACTATTGTGGGGAGCTGCA+TGG | 0.591973 | 3_2:-9138100 | Msa0394500:CDS |
| TGCACATGTCCTTCTCTCAA+GGG | 0.598418 | 3_2:-9137976 | Msa0394500:intron |
| TTCAAGGCCAGAGGTCAGGA+AGG | 0.600039 | 3_2:-9140789 | Msa0394500:CDS |
| CCATCACATCCTATTGTCTG+TGG | 0.600403 | 3_2:+9137183 | None:intergenic |
| GGCTCATACAGTGATTCACT+TGG | 0.605518 | 3_2:-9138509 | Msa0394500:CDS |
| TCAACCTGATATCTTCAGCT+GGG | 0.606032 | 3_2:-9138015 | Msa0394500:CDS |
| AGATGGTGGTGGACTATGAA+GGG | 0.613399 | 3_2:-9136867 | Msa0394500:three_prime_UTR |
| TGTATACTGTGTAGTTGAAG+AGG | 0.614209 | 3_2:+9137769 | None:intergenic |
| CCAGCAACTTACATCAATGG+TGG | 0.615251 | 3_2:-9137036 | Msa0394500:CDS |
| AAGCACACATTTAACTGTGG+TGG | 0.619659 | 3_2:-9137451 | Msa0394500:CDS |
| GTGTTGATGTTGCACACTTG+AGG | 0.620658 | 3_2:+9138780 | None:intergenic |
| AAGTGTGCAACATCAACACC+TGG | 0.627700 | 3_2:-9138776 | Msa0394500:CDS |
| TCAGCAGCAACATCAGAACC+GGG | 0.629928 | 3_2:+9138647 | None:intergenic |
| ACTGTGAAGAAAGATGAGAA+AGG | 0.633383 | 3_2:+9136662 | None:intergenic |
| CAGCAACTTACATCAATGGT+GGG | 0.637988 | 3_2:-9137035 | Msa0394500:CDS |
| CTTCAGGATGAACTATTGTG+GGG | 0.648937 | 3_2:-9138110 | Msa0394500:intron |
| GTATACTGTGTAGTTGAAGA+GGG | 0.651354 | 3_2:+9137770 | None:intergenic |
| TGAGGAGATAATCTGTGGCG+TGG | 0.651976 | 3_2:+9138798 | None:intergenic |
| TGGAGTATATTACATCGGCA+AGG | 0.663925 | 3_2:+9140710 | None:intergenic |
| CAGACAATAGGATGTGATGG+AGG | 0.672550 | 3_2:-9137180 | Msa0394500:CDS |
| ACACCTGGAAGACTCTATGT+CGG | 0.686227 | 3_2:-9138761 | Msa0394500:CDS |
| ACACTTGAGGAGATAATCTG+TGG | 0.686648 | 3_2:+9138793 | None:intergenic |
| CCCAAGAGGATTCACCACAG+AGG | 0.688585 | 3_2:-9137234 | Msa0394500:CDS |
| TGATGCATTAATGCGAGCCG+CGG | 0.689909 | 3_2:-9136599 | Msa0394500:three_prime_UTR |
| TCAACTACACAGTATACACA+AGG | 0.701067 | 3_2:-9137764 | Msa0394500:intron |
| TGTGGATGAACTGATAGTGA+AGG | 0.707912 | 3_2:+9137201 | None:intergenic |
| GACGGATTTCCTGATGATCG+CGG | 0.711969 | 3_2:-9137078 | Msa0394500:CDS |
| GGAGGTCCAAACCAGAACGA+CGG | 0.712912 | 3_2:-9137096 | Msa0394500:CDS |
| ACAAAGCACACATTTAACTG+TGG | 0.729394 | 3_2:-9137454 | Msa0394500:CDS |
| AAGGCAATGAAGATCCTCTG+TGG | 0.790898 | 3_2:+9137220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAAACATTATAATTT+GGG | + | chr3_2:9137121-9137140 | None:intergenic | 10.0% |
| !! | AAATGAAAAACATTATAATT+TGG | + | chr3_2:9137122-9137141 | None:intergenic | 10.0% |
| !! | CAAAAAAATAAAAGCAAAAA+TGG | + | chr3_2:9136850-9136869 | None:intergenic | 15.0% |
| !! | AATATAGCAAATATAAGATA+GGG | + | chr3_2:9137501-9137520 | None:intergenic | 15.0% |
| !! | AAATATAGCAAATATAAGAT+AGG | + | chr3_2:9137502-9137521 | None:intergenic | 15.0% |
| !!! | TATCTTATATTTGCTATATT+TGG | - | chr3_2:9137501-9137520 | Msa0394500:CDS | 15.0% |
| !!! | ATATGTTTGAAATTTTTCAA+TGG | - | chr3_2:9137580-9137599 | Msa0394500:intron | 15.0% |
| !!! | TGTTTTTTTAATCACTTAAA+TGG | - | chr3_2:9137736-9137755 | Msa0394500:intron | 15.0% |
| !!! | TATTTCCTTATTTTAACTTT+TGG | - | chr3_2:9137771-9137790 | Msa0394500:CDS | 15.0% |
| !! | ATAAACCAAAAGTTAAAATA+AGG | + | chr3_2:9137779-9137798 | None:intergenic | 15.0% |
| !! | AGTTACTTGTATTATAATAA+GGG | - | chr3_2:9137821-9137840 | Msa0394500:CDS | 15.0% |
| !!! | AGAAATTTATTTTTTGTTCA+AGG | + | chr3_2:9138076-9138095 | None:intergenic | 15.0% |
| !! | AAAAAACTGTATGATAAATA+TGG | - | chr3_2:9138115-9138134 | Msa0394500:intron | 15.0% |
| !!! | TATAGTTAAATATCTAGTTT+TGG | - | chr3_2:9139161-9139180 | Msa0394500:intron | 15.0% |
| !!! | ATAAAATCAATTTTAAACAG+AGG | - | chr3_2:9139296-9139315 | Msa0394500:intron | 15.0% |
| !!! | TAAAATCAATTTTAAACAGA+GGG | - | chr3_2:9139297-9139316 | Msa0394500:intron | 15.0% |
| !! | ACTATAAATATAATAGTTGA+TGG | + | chr3_2:9139843-9139862 | None:intergenic | 15.0% |
| !! | ACATAAATTTCAAATCAATA+TGG | - | chr3_2:9139913-9139932 | Msa0394500:intron | 15.0% |
| !!! | AAAATTTGTTGTAAAATTTC+AGG | - | chr3_2:9140215-9140234 | Msa0394500:intron | 15.0% |
| !!! | AAATCCTTATTGTTTTTTCA+AGG | - | chr3_2:9136732-9136751 | Msa0394500:three_prime_UTR | 20.0% |
| !! | AAAAATGGAGTATATTACAT+CGG | + | chr3_2:9136835-9136854 | None:intergenic | 20.0% |
| !! | AAAAACATTATAATTTGGGT+TGG | + | chr3_2:9137117-9137136 | None:intergenic | 20.0% |
| !! | ATATTATTTGTGTTCTACTA+CGG | - | chr3_2:9137155-9137174 | Msa0394500:CDS | 20.0% |
| !!! | AAACAACTTCTTTGTTTTTA+TGG | - | chr3_2:9137217-9137236 | Msa0394500:CDS | 20.0% |
| !!! | AACAACTTCTTTGTTTTTAT+GGG | - | chr3_2:9137218-9137237 | Msa0394500:CDS | 20.0% |
| !!! | CTCAAACAATTTTGTTTAAA+GGG | + | chr3_2:9137472-9137491 | None:intergenic | 20.0% |
| !! | AAATTTCAAACATATTACGT+TGG | + | chr3_2:9137575-9137594 | None:intergenic | 20.0% |
| !!! | TCTAATTCATGTTTCTATAT+AGG | - | chr3_2:9137659-9137678 | Msa0394500:intron | 20.0% |
| !!! | CTAATTCATGTTTCTATATA+GGG | - | chr3_2:9137660-9137679 | Msa0394500:intron | 20.0% |
| !! | TGATTAAAAAAACAAAGACT+AGG | + | chr3_2:9137730-9137749 | None:intergenic | 20.0% |
| !! | CAGTTACTTGTATTATAATA+AGG | - | chr3_2:9137820-9137839 | Msa0394500:CDS | 20.0% |
| !! | TTTATTCTGTTCTATACTAT+TGG | + | chr3_2:9137914-9137933 | None:intergenic | 20.0% |
| !! | AAATAAAAAAGTTAGAGTTC+TGG | - | chr3_2:9137944-9137963 | Msa0394500:intron | 20.0% |
| !!! | TTTATTTTTTGTTCAAGGAT+TGG | + | chr3_2:9138071-9138090 | None:intergenic | 20.0% |
| !! | AAAGTTTAGACAAAACAAAT+TGG | + | chr3_2:9139618-9139637 | None:intergenic | 20.0% |
| !!! | AACAAATTTTATCAACAAAG+AGG | + | chr3_2:9140205-9140224 | None:intergenic | 20.0% |
| !! | AATCTAACATTAATTGTTAC+CGG | + | chr3_2:9140553-9140572 | None:intergenic | 20.0% |
| !!! | TATTTTAGAGTATCTGAATT+TGG | + | chr3_2:9140914-9140933 | None:intergenic | 20.0% |
| !! | AAAAACAAAGAAGTTGTTTC+CGG | + | chr3_2:9137216-9137235 | None:intergenic | 25.0% |
| !!! | ACAACTTCTTTGTTTTTATG+GGG | - | chr3_2:9137219-9137238 | Msa0394500:CDS | 25.0% |
| !!! | TGATCTTACTTTTCAATCAT+CGG | - | chr3_2:9137411-9137430 | Msa0394500:CDS | 25.0% |
| !!! | CCTCAAACAATTTTGTTTAA+AGG | + | chr3_2:9137473-9137492 | None:intergenic | 25.0% |
| ! | CCTTTAAACAAAATTGTTTG+AGG | - | chr3_2:9137470-9137489 | Msa0394500:CDS | 25.0% |
| ! | AGTAAGTTCAATGAATTCTT+AGG | + | chr3_2:9138027-9138046 | None:intergenic | 25.0% |
| !! | CAAAATTATTGATTGAAGCT+AGG | + | chr3_2:9138148-9138167 | None:intergenic | 25.0% |
| !! | ATCAAGTTGTTTATCCAAAT+CGG | + | chr3_2:9138247-9138266 | None:intergenic | 25.0% |
| ! | ATGCAAGTGAAATTATAGAA+TGG | + | chr3_2:9138522-9138541 | None:intergenic | 25.0% |
| !! | TGTGAAATTCAATTTTCCAA+TGG | - | chr3_2:9138628-9138647 | Msa0394500:CDS | 25.0% |
| ! | AATTGAATATGGAAAGAGAA+TGG | - | chr3_2:9138682-9138701 | Msa0394500:CDS | 25.0% |
| ! | ATTGAATATGGAAAGAGAAT+GGG | - | chr3_2:9138683-9138702 | Msa0394500:CDS | 25.0% |
| ! | AAATGTTGATCACAAATGTT+GGG | - | chr3_2:9138811-9138830 | Msa0394500:CDS | 25.0% |
| ! | AACAAAAGCTTAGAATAAGT+TGG | + | chr3_2:9138965-9138984 | None:intergenic | 25.0% |
| !!! | TTTTGGTAGTATCACTATTA+GGG | - | chr3_2:9139178-9139197 | Msa0394500:intron | 25.0% |
| ! | TCTCTCTAATAGTAAGAAAT+AGG | + | chr3_2:9139363-9139382 | None:intergenic | 25.0% |
| ! | AATAGGCATTATTTATCTTC+AGG | - | chr3_2:9139411-9139430 | Msa0394500:intron | 25.0% |
| ! | TGCTGTTAAATACTACAATT+TGG | - | chr3_2:9139477-9139496 | Msa0394500:intron | 25.0% |
| ! | ATAAGAACTTTGATCAGTAT+AGG | - | chr3_2:9139702-9139721 | Msa0394500:intron | 25.0% |
| ! | ATGAAATCATTCTCTATTCT+TGG | + | chr3_2:9139879-9139898 | None:intergenic | 25.0% |
| !! | TGGCTTATAGAGTATTATAA+AGG | - | chr3_2:9139933-9139952 | Msa0394500:intron | 25.0% |
| !! | GGCTTATAGAGTATTATAAA+GGG | - | chr3_2:9139934-9139953 | Msa0394500:intron | 25.0% |
| !! | TTTCAGGTAGACTATATATT+AGG | - | chr3_2:9140231-9140250 | Msa0394500:intron | 25.0% |
| ! | TGATTCATTGAATGGAAAAA+CGG | + | chr3_2:9140390-9140409 | None:intergenic | 25.0% |
| ! | GTAAAACATAGTAAAGATGT+TGG | + | chr3_2:9140760-9140779 | None:intergenic | 25.0% |
| !!! | AGTGATTGCATAAGTTTTTT+GGG | + | chr3_2:9140804-9140823 | None:intergenic | 25.0% |
| !!! | AAGTGATTGCATAAGTTTTT+TGG | + | chr3_2:9140805-9140824 | None:intergenic | 25.0% |
| ! | TCTTCACAGTAATAACATAA+AGG | - | chr3_2:9140888-9140907 | Msa0394500:CDS | 25.0% |
| !!! | CATACAAACCTAGTTTTGTT+GGG | - | chr3_2:9137084-9137103 | Msa0394500:CDS | 30.0% |
| !!! | ATACAAACCTAGTTTTGTTG+GGG | - | chr3_2:9137085-9137104 | Msa0394500:CDS | 30.0% |
| !!! | CAACTTCTTTGTTTTTATGG+GGG | - | chr3_2:9137220-9137239 | Msa0394500:CDS | 30.0% |
| ! | TTTAAAACATTGTAGCCATG+TGG | + | chr3_2:9137277-9137296 | None:intergenic | 30.0% |
| TGAAAAGTAAGATCATCTCT+AGG | + | chr3_2:9137406-9137425 | None:intergenic | 30.0% | |
| AATATTGTTTGATGCAAGCT+TGG | - | chr3_2:9137446-9137465 | Msa0394500:CDS | 30.0% | |
| AAGTAATAACAGATTCAGCA+AGG | + | chr3_2:9137628-9137647 | None:intergenic | 30.0% | |
| ! | TCAATGAATTCTTAGGCTTT+TGG | + | chr3_2:9138020-9138039 | None:intergenic | 30.0% |
| TACAATTTATTCGTCCGATT+TGG | - | chr3_2:9138230-9138249 | Msa0394500:intron | 30.0% | |
| AAATTATAGAATGGCGTGTT+TGG | + | chr3_2:9138513-9138532 | None:intergenic | 30.0% | |
| ATTTCACTTGCATTATCCAA+TGG | - | chr3_2:9138529-9138548 | Msa0394500:CDS | 30.0% | |
| !! | ATACACAAACATTGTTTTGC+AGG | - | chr3_2:9138568-9138587 | Msa0394500:CDS | 30.0% |
| TCACAACAACAATGTTATCA+TGG | - | chr3_2:9138654-9138673 | Msa0394500:CDS | 30.0% | |
| CAACATTTGTGATCAACATT+TGG | + | chr3_2:9138812-9138831 | None:intergenic | 30.0% | |
| CAAATGTTGATCACAAATGT+TGG | - | chr3_2:9138810-9138829 | Msa0394500:CDS | 30.0% | |
| TATGTATCTTCAAACAATCC+CGG | - | chr3_2:9138872-9138891 | Msa0394500:CDS | 30.0% | |
| ! | CTTATTCTAAGCTTTTGTTG+AGG | - | chr3_2:9138966-9138985 | Msa0394500:intron | 30.0% |
| CCAGAATATGAGCAATAAAA+TGG | + | chr3_2:9139067-9139086 | None:intergenic | 30.0% | |
| ! | CCATTTTATTGCTCATATTC+TGG | - | chr3_2:9139064-9139083 | Msa0394500:intron | 30.0% |
| !! | GTTTTGGTAGTATCACTATT+AGG | - | chr3_2:9139177-9139196 | Msa0394500:intron | 30.0% |
| ! | TTTGGTAGTATCACTATTAG+GGG | - | chr3_2:9139179-9139198 | Msa0394500:intron | 30.0% |
| ! | TTGGTTGTTAAGTTTGAGAT+TGG | - | chr3_2:9139253-9139272 | Msa0394500:intron | 30.0% |
| TCTACTTGTATCGTTCTAAT+AGG | - | chr3_2:9139394-9139413 | Msa0394500:intron | 30.0% | |
| TATTGCTTGAATTAATGTGC+AGG | - | chr3_2:9139969-9139988 | Msa0394500:intron | 30.0% | |
| ATTGCTTGAATTAATGTGCA+GGG | - | chr3_2:9139970-9139989 | Msa0394500:intron | 30.0% | |
| TACAACCTATTCCAAGTATA+TGG | - | chr3_2:9140055-9140074 | Msa0394500:intron | 30.0% | |
| GAATCAGAACCCTAATATAT+TGG | - | chr3_2:9140404-9140423 | Msa0394500:intron | 30.0% | |
| ! | TAGATTTGACTTTGATAGCA+AGG | - | chr3_2:9140567-9140586 | Msa0394500:intron | 30.0% |
| TCTACCAAATCAAAAACAGA+TGG | - | chr3_2:9140653-9140672 | Msa0394500:intron | 30.0% | |
| ! | TTACTATGTTTTACGCTACA+TGG | - | chr3_2:9140766-9140785 | Msa0394500:CDS | 30.0% |
| AATAAAGACGAATGCAAAGA+TGG | + | chr3_2:9140849-9140868 | None:intergenic | 30.0% | |
| !! | CTCTATAGTTTGGTTTGCAT+TGG | + | chr3_2:9136701-9136720 | None:intergenic | 35.0% |
| ACCAAACTATAGAGAAGCTT+TGG | - | chr3_2:9136707-9136726 | Msa0394500:three_prime_UTR | 35.0% | |
| !! | CTGGCCTTGAAAAAACAATA+AGG | + | chr3_2:9136739-9136758 | None:intergenic | 35.0% |
| !!! | TATTGTTTTTTCAAGGCCAG+AGG | - | chr3_2:9136739-9136758 | Msa0394500:three_prime_UTR | 35.0% |
| !! | ATTTGATTTGTTGGTCAGGA+GGG | + | chr3_2:9136776-9136795 | None:intergenic | 35.0% |
| !! | TGGATCTCCATTTGATTTGT+TGG | + | chr3_2:9136785-9136804 | None:intergenic | 35.0% |
| ATCAAATGGAGATCCAATTC+TGG | - | chr3_2:9136789-9136808 | Msa0394500:three_prime_UTR | 35.0% | |
| AAAACTAGGTTTGTATGGTG+AGG | + | chr3_2:9137081-9137100 | None:intergenic | 35.0% | |
| CCAACAAAACTAGGTTTGTA+TGG | + | chr3_2:9137086-9137105 | None:intergenic | 35.0% | |
| !!! | CCATACAAACCTAGTTTTGT+TGG | - | chr3_2:9137083-9137102 | Msa0394500:CDS | 35.0% |
| ! | GAAGTTACAAGTTCTAATGC+CGG | - | chr3_2:9137194-9137213 | Msa0394500:CDS | 35.0% |
| ATCAAGCAAACCAGTAAACA+AGG | + | chr3_2:9137322-9137341 | None:intergenic | 35.0% | |
| !! | TTTACTGGTTTGCTTGATCT+CGG | - | chr3_2:9137324-9137343 | Msa0394500:intron | 35.0% |
| ATCTCGGTTATATTACTGTC+TGG | - | chr3_2:9137340-9137359 | Msa0394500:intron | 35.0% | |
| CAAGGTAAGGTAATTTGGTT+TGG | + | chr3_2:9137610-9137629 | None:intergenic | 35.0% | |
| TTCAGCAAGGTAAGGTAATT+TGG | + | chr3_2:9137615-9137634 | None:intergenic | 35.0% | |
| ATAACAGATTCAGCAAGGTA+AGG | + | chr3_2:9137623-9137642 | None:intergenic | 35.0% | |
| AAACAAAGACTAGGCATCAA+AGG | + | chr3_2:9137721-9137740 | None:intergenic | 35.0% | |
| ! | AATTCTTAGGCTTTTGGTGA+AGG | + | chr3_2:9138014-9138033 | None:intergenic | 35.0% |
| AAGAAGCTAAAAACAGCTCA+TGG | - | chr3_2:9138405-9138424 | Msa0394500:intron | 35.0% | |
| ! | ATTGTTGTTGTGAATGCCAT+TGG | + | chr3_2:9138647-9138666 | None:intergenic | 35.0% |
| TCATGGAGCACAATTGAATA+TGG | - | chr3_2:9138671-9138690 | Msa0394500:CDS | 35.0% | |
| TTGCTCATATTCTGGATTCA+AGG | - | chr3_2:9139072-9139091 | Msa0394500:intron | 35.0% | |
| ! | TTACACGTAGCAGACAATTT+TGG | - | chr3_2:9139234-9139253 | Msa0394500:intron | 35.0% |
| ! | CTATGTGATACAGTTTTTCG+AGG | - | chr3_2:9139334-9139353 | Msa0394500:intron | 35.0% |
| ATCTTCAGGATGAACTATTG+TGG | - | chr3_2:9139425-9139444 | Msa0394500:intron | 35.0% | |
| TCTTCAGGATGAACTATTGT+GGG | - | chr3_2:9139426-9139445 | Msa0394500:intron | 35.0% | |
| TACAATTTGGCCAAGTCTTT+GGG | - | chr3_2:9139490-9139509 | Msa0394500:intron | 35.0% | |
| GTATACTGTGTAGTTGAAGA+GGG | + | chr3_2:9139770-9139789 | None:intergenic | 35.0% | |
| TGTATACTGTGTAGTTGAAG+AGG | + | chr3_2:9139771-9139790 | None:intergenic | 35.0% | |
| TCAACTACACAGTATACACA+AGG | - | chr3_2:9139773-9139792 | Msa0394500:intron | 35.0% | |
| TTGCTTGAATTAATGTGCAG+GGG | - | chr3_2:9139971-9139990 | Msa0394500:intron | 35.0% | |
| ACAAAGCACACATTTAACTG+TGG | - | chr3_2:9140083-9140102 | Msa0394500:intron | 35.0% | |
| TCCACTTAGAATGTCCTATA+TGG | - | chr3_2:9140260-9140279 | Msa0394500:intron | 35.0% | |
| ACCATATAGGACATTCTAAG+TGG | + | chr3_2:9140264-9140283 | None:intergenic | 35.0% | |
| CTTAGAATGTCCTATATGGT+AGG | - | chr3_2:9140264-9140283 | Msa0394500:intron | 35.0% | |
| ATGTCCTATATGGTAGGTTA+TGG | - | chr3_2:9140270-9140289 | Msa0394500:intron | 35.0% | |
| TGAATCCTCTTGGGAAAATA+TGG | + | chr3_2:9140297-9140316 | None:intergenic | 35.0% | |
| ! | TAGGGTTCTGATTCATTGAA+TGG | + | chr3_2:9140398-9140417 | None:intergenic | 35.0% |
| CAGAACCCTAATATATTGGT+TGG | - | chr3_2:9140408-9140427 | Msa0394500:intron | 35.0% | |
| TGGCTCCAACCAATATATTA+GGG | + | chr3_2:9140416-9140435 | None:intergenic | 35.0% | |
| ATGGCTCCAACCAATATATT+AGG | + | chr3_2:9140417-9140436 | None:intergenic | 35.0% | |
| ACCAAATCAAAAACAGATGG+TGG | - | chr3_2:9140656-9140675 | Msa0394500:intron | 35.0% | |
| !!! | ACCACCATCTGTTTTTGATT+TGG | + | chr3_2:9140660-9140679 | None:intergenic | 35.0% |
| ! | AAATCAAAAACAGATGGTGG+TGG | - | chr3_2:9140659-9140678 | Msa0394500:intron | 35.0% |
| ACTGTGAAGAAAGATGAGAA+AGG | + | chr3_2:9140878-9140897 | None:intergenic | 35.0% | |
| ! | TTATGCTCACTGGTTGTCTT+GGG | + | chr3_2:9136620-9136639 | None:intergenic | 40.0% |
| ! | ATTATGCTCACTGGTTGTCT+TGG | + | chr3_2:9136621-9136640 | None:intergenic | 40.0% |
| GAAGTTCTCATTATGCTCAC+TGG | + | chr3_2:9136630-9136649 | None:intergenic | 40.0% | |
| GTTACTTCTTACATGCTTGC+TGG | - | chr3_2:9136662-9136681 | Msa0394500:three_prime_UTR | 40.0% | |
| GCCAAAGCTTCTCTATAGTT+TGG | + | chr3_2:9136711-9136730 | None:intergenic | 40.0% | |
| !! | CATTTGATTTGTTGGTCAGG+AGG | + | chr3_2:9136777-9136796 | None:intergenic | 40.0% |
| CTCCTGACCAACAAATCAAA+TGG | - | chr3_2:9136775-9136794 | Msa0394500:three_prime_UTR | 40.0% | |
| !! | CTCCATTTGATTTGTTGGTC+AGG | + | chr3_2:9136780-9136799 | None:intergenic | 40.0% |
| TGGAGTATATTACATCGGCA+AGG | + | chr3_2:9136830-9136849 | None:intergenic | 40.0% | |
| ATGTCGGTGATATATAGGTG+AGG | + | chr3_2:9136932-9136951 | None:intergenic | 40.0% | |
| CACACATGTCGGTGATATAT+AGG | + | chr3_2:9136937-9136956 | None:intergenic | 40.0% | |
| CTATATATCACCGACATGTG+TGG | - | chr3_2:9136935-9136954 | Msa0394500:three_prime_UTR | 40.0% | |
| GCTAAACCCTAACACAAACA+TGG | + | chr3_2:9137054-9137073 | None:intergenic | 40.0% | |
| GATTCAACCCCAACAAAACT+AGG | + | chr3_2:9137095-9137114 | None:intergenic | 40.0% | |
| AGTCTGAAGAGGATAGATGT+AGG | + | chr3_2:9137254-9137273 | None:intergenic | 40.0% | |
| !! | AAACAAGGCACTGGTCATTT+CGG | + | chr3_2:9137307-9137326 | None:intergenic | 40.0% |
| TGGTTGAACTAGTTCAACTG+TGG | - | chr3_2:9137360-9137379 | Msa0394500:intron | 40.0% | |
| AGTCTGTTTGAGAGAGCTTA+TGG | + | chr3_2:9138449-9138468 | None:intergenic | 40.0% | |
| GTGTTAGCACTTTGTTCCAT+TGG | + | chr3_2:9138548-9138567 | None:intergenic | 40.0% | |
| !! | CACAAACATTGTTTTGCAGG+TGG | - | chr3_2:9138571-9138590 | Msa0394500:CDS | 40.0% |
| GCTCTTGCTTCTTTCATTTG+TGG | + | chr3_2:9138710-9138729 | None:intergenic | 40.0% | |
| ACACTTGAGGAGATAATCTG+TGG | + | chr3_2:9138747-9138766 | None:intergenic | 40.0% | |
| TTGGGAAAGACCAGAAGATA+TGG | - | chr3_2:9138829-9138848 | Msa0394500:CDS | 40.0% | |
| CTAACAGTGTCCATATCTTC+TGG | + | chr3_2:9138842-9138861 | None:intergenic | 40.0% | |
| TTTGTTGAGGACTTCACAGA+AGG | - | chr3_2:9138979-9138998 | Msa0394500:intron | 40.0% | |
| ! | CAGTTTGCTTTGCAGTATCA+AGG | - | chr3_2:9139007-9139026 | Msa0394500:intron | 40.0% |
| CCAATACTCGGATTCTTACT+CGG | - | chr3_2:9139134-9139153 | Msa0394500:intron | 40.0% | |
| TAGTATCACTATTAGGGGTC+TGG | - | chr3_2:9139184-9139203 | Msa0394500:intron | 40.0% | |
| CTTCAGGATGAACTATTGTG+GGG | - | chr3_2:9139427-9139446 | Msa0394500:intron | 40.0% | |
| CTACAATTTGGCCAAGTCTT+TGG | - | chr3_2:9139489-9139508 | Msa0394500:intron | 40.0% | |
| ATCAACCTGATATCTTCAGC+TGG | - | chr3_2:9139521-9139540 | Msa0394500:intron | 40.0% | |
| TCAACCTGATATCTTCAGCT+GGG | - | chr3_2:9139522-9139541 | Msa0394500:intron | 40.0% | |
| TTATCCCAGCTGAAGATATC+AGG | + | chr3_2:9139529-9139548 | None:intergenic | 40.0% | |
| AGCTGGGATAACAAATATGC+TGG | - | chr3_2:9139538-9139557 | Msa0394500:intron | 40.0% | |
| TTCAACTTACCCTTGAGAGA+AGG | + | chr3_2:9139573-9139592 | None:intergenic | 40.0% | |
| GTAGTTGAAGAGGGTGAATT+GGG | + | chr3_2:9139761-9139780 | None:intergenic | 40.0% | |
| TGTAGTTGAAGAGGGTGAAT+TGG | + | chr3_2:9139762-9139781 | None:intergenic | 40.0% | |
| TGCTTGAATTAATGTGCAGG+GGG | - | chr3_2:9139972-9139991 | Msa0394500:intron | 40.0% | |
| ACATACTGAAGATTGCTTGC+AGG | + | chr3_2:9140014-9140033 | None:intergenic | 40.0% | |
| AGCTGCCATATACTTGGAAT+AGG | + | chr3_2:9140063-9140082 | None:intergenic | 40.0% | |
| CTTTGTAGCTGCCATATACT+TGG | + | chr3_2:9140069-9140088 | None:intergenic | 40.0% | |
| AAGCACACATTTAACTGTGG+TGG | - | chr3_2:9140086-9140105 | Msa0394500:intron | 40.0% | |
| ! | GCAACAGTTCTCAAGGTATT+TGG | + | chr3_2:9140125-9140144 | None:intergenic | 40.0% |
| ! | TCTTTTCGCAACAGTTCTCA+AGG | + | chr3_2:9140132-9140151 | None:intergenic | 40.0% |
| TGGACCATAACCTACCATAT+AGG | + | chr3_2:9140277-9140296 | None:intergenic | 40.0% | |
| ! | ATGGTCCATATTTTCCCAAG+AGG | - | chr3_2:9140289-9140308 | Msa0394500:intron | 40.0% |
| ! | TGTGGATGAACTGATAGTGA+AGG | + | chr3_2:9140339-9140358 | None:intergenic | 40.0% |
| TCAGTTCATCCACAGACAAT+AGG | - | chr3_2:9140345-9140364 | Msa0394500:intron | 40.0% | |
| ! | ATATTGGTTGGAGCCATAGT+TGG | - | chr3_2:9140420-9140439 | Msa0394500:intron | 40.0% |
| GAACCAGCAACTTACATCAA+TGG | - | chr3_2:9140498-9140517 | Msa0394500:intron | 40.0% | |
| CAGCAACTTACATCAATGGT+GGG | - | chr3_2:9140502-9140521 | Msa0394500:intron | 40.0% | |
| ! | TACATCAATGGTGGGATTGT+TGG | - | chr3_2:9140510-9140529 | Msa0394500:intron | 40.0% |
| TCTCATCTCTACCCAACAAA+GGG | - | chr3_2:9140627-9140646 | Msa0394500:intron | 40.0% | |
| TTGGTAGACATCCCTTTGTT+GGG | + | chr3_2:9140641-9140660 | None:intergenic | 40.0% | |
| TTTGGTAGACATCCCTTTGT+TGG | + | chr3_2:9140642-9140661 | None:intergenic | 40.0% | |
| !!! | TTTTTTCAAGGCCAGAGGTC+AGG | - | chr3_2:9136744-9136763 | Msa0394500:three_prime_UTR | 45.0% |
| !! | TATCACCAGTGTCGACGTAT+TGG | - | chr3_2:9137005-9137024 | Msa0394500:CDS | 45.0% |
| TGGGGTCCATGTTTGTGTTA+GGG | - | chr3_2:9137045-9137064 | Msa0394500:CDS | 45.0% | |
| ! | CTACGGTTGTTGTTGTGACA+TGG | - | chr3_2:9137172-9137191 | Msa0394500:CDS | 45.0% |
| TATCCTCTTCAGACTCCACA+TGG | - | chr3_2:9137259-9137278 | Msa0394500:CDS | 45.0% | |
| !! | ATGACCAGTGCCTTGTTTAC+TGG | - | chr3_2:9137309-9137328 | Msa0394500:intron | 45.0% |
| CAAACCAGTAAACAAGGCAC+TGG | + | chr3_2:9137316-9137335 | None:intergenic | 45.0% | |
| !! | GTTTTGCAGGTGGATTTGAC+AGG | - | chr3_2:9138581-9138600 | Msa0394500:CDS | 45.0% |
| ACAGGAGGCTATTATGATGC+AGG | - | chr3_2:9138599-9138618 | Msa0394500:CDS | 45.0% | |
| ! | GTGTTGATGTTGCACACTTG+AGG | + | chr3_2:9138760-9138779 | None:intergenic | 45.0% |
| AAGTGTGCAACATCAACACC+TGG | - | chr3_2:9138761-9138780 | Msa0394500:CDS | 45.0% | |
| ACACCTGGAAGACTCTATGT+CGG | - | chr3_2:9138776-9138795 | Msa0394500:CDS | 45.0% | |
| TTCAGCAGCAACATCAGAAC+CGG | + | chr3_2:9138894-9138913 | None:intergenic | 45.0% | |
| GGCTCATACAGTGATTCACT+TGG | - | chr3_2:9139028-9139047 | Msa0394500:intron | 45.0% | |
| ! | CCTAGAGCATCTCCAATACT+CGG | - | chr3_2:9139122-9139141 | Msa0394500:intron | 45.0% |
| CCGAGTAAGAATCCGAGTAT+TGG | + | chr3_2:9139137-9139156 | None:intergenic | 45.0% | |
| GGGTCTGGATTCTCTAATGT+AGG | - | chr3_2:9139199-9139218 | Msa0394500:intron | 45.0% | |
| ATCATCAGCTCCCAAAGACT+TGG | + | chr3_2:9139503-9139522 | None:intergenic | 45.0% | |
| TGCACATGTCCTTCTCTCAA+GGG | - | chr3_2:9139561-9139580 | Msa0394500:intron | 45.0% | |
| !! | CTACAGAGAGCATTGCTGAA+TGG | - | chr3_2:9139677-9139696 | Msa0394500:intron | 45.0% |
| GAGAACTGTTGCGAAAAGAC+AGG | - | chr3_2:9140133-9140152 | Msa0394500:intron | 45.0% | |
| AAGGCAATGAAGATCCTCTG+TGG | + | chr3_2:9140320-9140339 | None:intergenic | 45.0% | |
| CCATCACATCCTATTGTCTG+TGG | + | chr3_2:9140357-9140376 | None:intergenic | 45.0% | |
| CCACAGACAATAGGATGTGA+TGG | - | chr3_2:9140354-9140373 | Msa0394500:intron | 45.0% | |
| CAGACAATAGGATGTGATGG+AGG | - | chr3_2:9140357-9140376 | Msa0394500:intron | 45.0% | |
| CCACCATTGATGTAAGTTGC+TGG | + | chr3_2:9140504-9140523 | None:intergenic | 45.0% | |
| CCAGCAACTTACATCAATGG+TGG | - | chr3_2:9140501-9140520 | Msa0394500:intron | 45.0% | |
| TTACCGGCAAAGTACGCTAA+AGG | + | chr3_2:9140537-9140556 | None:intergenic | 45.0% | |
| GTCTCATCTCTACCCAACAA+AGG | - | chr3_2:9140626-9140645 | Msa0394500:intron | 45.0% | |
| !! | AGATGGTGGTGGACTATGAA+GGG | - | chr3_2:9140670-9140689 | Msa0394500:intron | 45.0% |
| !!! | ATTTTTATATGATATTTTTT+TGG | + | chr3_2:9138197-9138216 | None:intergenic | 5.0% |
| TCCAATTCTGGCATGTCCGA+TGG | - | chr3_2:9136801-9136820 | Msa0394500:three_prime_UTR | 50.0% | |
| ACCATCGGACATGCCAGAAT+TGG | + | chr3_2:9136805-9136824 | None:intergenic | 50.0% | |
| ACACACCAATACGTCGACAC+TGG | + | chr3_2:9137013-9137032 | None:intergenic | 50.0% | |
| ! | TGGTGTGTCACTGTCGTATC+TGG | - | chr3_2:9137025-9137044 | Msa0394500:CDS | 50.0% |
| ! | GGTGTGTCACTGTCGTATCT+GGG | - | chr3_2:9137026-9137045 | Msa0394500:CDS | 50.0% |
| ! | GTGTGTCACTGTCGTATCTG+GGG | - | chr3_2:9137027-9137046 | Msa0394500:CDS | 50.0% |
| CTGGGGTCCATGTTTGTGTT+AGG | - | chr3_2:9137044-9137063 | Msa0394500:CDS | 50.0% | |
| TAGCCATGTGGAGTCTGAAG+AGG | + | chr3_2:9137265-9137284 | None:intergenic | 50.0% | |
| ! | TTGCAGGTGGATTTGACAGG+AGG | - | chr3_2:9138584-9138603 | Msa0394500:CDS | 50.0% |
| TGAGGAGATAATCTGTGGCG+TGG | + | chr3_2:9138742-9138761 | None:intergenic | 50.0% | |
| ACACCGACATAGAGTCTTCC+AGG | + | chr3_2:9138782-9138801 | None:intergenic | 50.0% | |
| GGAAGACTCTATGTCGGTGT+TGG | - | chr3_2:9138782-9138801 | Msa0394500:CDS | 50.0% | |
| TCAGCAGCAACATCAGAACC+GGG | + | chr3_2:9138893-9138912 | None:intergenic | 50.0% | |
| !! | CCGAGTATTGGAGATGCTCT+AGG | + | chr3_2:9139125-9139144 | None:intergenic | 50.0% |
| AACTATTGTGGGGAGCTGCA+TGG | - | chr3_2:9139437-9139456 | Msa0394500:intron | 50.0% | |
| ! | GGGAGCTGCATGGCTTTTTA+GGG | - | chr3_2:9139447-9139466 | Msa0394500:intron | 50.0% |
| GTGCACATGTCCTTCTCTCA+AGG | - | chr3_2:9139560-9139579 | Msa0394500:intron | 50.0% | |
| CCTCTGTGGTGAATCCTCTT+GGG | + | chr3_2:9140306-9140325 | None:intergenic | 50.0% | |
| TCCTCTGTGGTGAATCCTCT+TGG | + | chr3_2:9140307-9140326 | None:intergenic | 50.0% | |
| TTGGTTGGAGCCATAGTTGG+AGG | - | chr3_2:9140423-9140442 | Msa0394500:intron | 50.0% | |
| !! | CTGGTTTGGACCTCCAACTA+TGG | + | chr3_2:9140436-9140455 | None:intergenic | 50.0% |
| ! | GGAAATCCGTCGTTCTGGTT+TGG | + | chr3_2:9140450-9140469 | None:intergenic | 50.0% |
| CATCAGGAAATCCGTCGTTC+TGG | + | chr3_2:9140455-9140474 | None:intergenic | 50.0% | |
| ! | GACGGATTTCCTGATGATCG+CGG | - | chr3_2:9140459-9140478 | Msa0394500:intron | 50.0% |
| CTATAGTCACCGCGATCATC+AGG | + | chr3_2:9140471-9140490 | None:intergenic | 50.0% | |
| GGACCTTTAGCGTACTTTGC+CGG | - | chr3_2:9140531-9140550 | Msa0394500:intron | 50.0% | |
| !! | CAGATGGTGGTGGACTATGA+AGG | - | chr3_2:9140669-9140688 | Msa0394500:intron | 50.0% |
| TTCAAGGCCAGAGGTCAGGA+AGG | - | chr3_2:9136748-9136767 | Msa0394500:three_prime_UTR | 55.0% | |
| TACATCGGCAAGGCGACCAT+CGG | + | chr3_2:9136820-9136839 | None:intergenic | 55.0% | |
| TCACCGACATGTGTGGTGTC+TGG | - | chr3_2:9136942-9136961 | Msa0394500:three_prime_UTR | 55.0% | |
| GTGCCAGACACCACACATGT+CGG | + | chr3_2:9136948-9136967 | None:intergenic | 55.0% | |
| ATCTGTGGCGTGGCGAATTG+CGG | + | chr3_2:9138732-9138751 | None:intergenic | 55.0% | |
| ! | AACTGCTGCTGCACTTGCTG+CGG | - | chr3_2:9138913-9138932 | Msa0394500:CDS | 55.0% |
| ! | GGGGAGCTGCATGGCTTTTT+AGG | - | chr3_2:9139446-9139465 | Msa0394500:intron | 55.0% |
| CCCAAGAGGATTCACCACAG+AGG | - | chr3_2:9140303-9140322 | Msa0394500:intron | 55.0% | |
| GGAGGTCCAAACCAGAACGA+CGG | - | chr3_2:9140441-9140460 | Msa0394500:intron | 55.0% | |
| GAGGGAGCCTTCCTGACCTC+TGG | + | chr3_2:9136758-9136777 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 9136599 | 9140960 | 9136599 | ID=Msa0394500;Name=Msa0394500 |
| chr3_2 | mRNA | 9136599 | 9140960 | 9136599 | ID=Msa0394500-mRNA-1;Parent=Msa0394500;Name=Msa0394500-mRNA-1;_AED=0.13;_eAED=0.13;_QI=40|1|1|1|1|1|6|397|484 |
| chr3_2 | exon | 9136599 | 9137322 | 9136599 | ID=Msa0394500-mRNA-1:exon:2414;Parent=Msa0394500-mRNA-1 |
| chr3_2 | exon | 9137405 | 9137568 | 9137405 | ID=Msa0394500-mRNA-1:exon:2413;Parent=Msa0394500-mRNA-1 |
| chr3_2 | exon | 9137765 | 9137876 | 9137765 | ID=Msa0394500-mRNA-1:exon:2412;Parent=Msa0394500-mRNA-1 |
| chr3_2 | exon | 9137977 | 9138126 | 9137977 | ID=Msa0394500-mRNA-1:exon:2411;Parent=Msa0394500-mRNA-1 |
| chr3_2 | exon | 9138466 | 9138969 | 9138466 | ID=Msa0394500-mRNA-1:exon:2410;Parent=Msa0394500-mRNA-1 |
| chr3_2 | exon | 9140723 | 9140960 | 9140723 | ID=Msa0394500-mRNA-1:exon:2409;Parent=Msa0394500-mRNA-1 |
| chr3_2 | five_prime_UTR | 9140921 | 9140960 | 9140921 | ID=Msa0394500-mRNA-1:five_prime_utr;Parent=Msa0394500-mRNA-1 |
| chr3_2 | CDS | 9140723 | 9140920 | 9140723 | ID=Msa0394500-mRNA-1:cds;Parent=Msa0394500-mRNA-1 |
| chr3_2 | CDS | 9138466 | 9138969 | 9138466 | ID=Msa0394500-mRNA-1:cds;Parent=Msa0394500-mRNA-1 |
| chr3_2 | CDS | 9137977 | 9138126 | 9137977 | ID=Msa0394500-mRNA-1:cds;Parent=Msa0394500-mRNA-1 |
| chr3_2 | CDS | 9137765 | 9137876 | 9137765 | ID=Msa0394500-mRNA-1:cds;Parent=Msa0394500-mRNA-1 |
| chr3_2 | CDS | 9137405 | 9137568 | 9137405 | ID=Msa0394500-mRNA-1:cds;Parent=Msa0394500-mRNA-1 |
| chr3_2 | CDS | 9136996 | 9137322 | 9136996 | ID=Msa0394500-mRNA-1:cds;Parent=Msa0394500-mRNA-1 |
| chr3_2 | three_prime_UTR | 9136599 | 9136995 | 9136599 | ID=Msa0394500-mRNA-1:three_prime_utr;Parent=Msa0394500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
