AlfalfaGEDB | Msa0416380

M. sativa cultivar zhongmu-4 / Msa0416380

KEGG: -
GO: GO:0000302 GO:0001101 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0007568 GO:0007569 GO:0008150 GO:0009611 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009791 GO:0009889 GO:0009987 GO:0010029 GO:0010033 GO:0010035 GO:0010150 GO:0010468 GO:0010556 GO:0010941 GO:0010942 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032501 GO:0032502 GO:0033554 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0042802 GO:0042803 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044093 GO:0044424 GO:0044464 GO:0045088 GO:0045089 GO:0046677 GO:0046983 GO:0048364 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048580 GO:0048583 GO:0048584 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0080090 GO:0080134 GO:0090398 GO:0090400 GO:0090693 GO:0090696 GO:0097159 GO:0097305 GO:0099402 GO:0140110 GO:1900055 GO:1900057 GO:1900140 GO:1901363 GO:1901700 GO:1902074 GO:1903506 GO:1904248 GO:1904250 GO:1905623 GO:2000024 GO:2000026 GO:2000112 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0416380	XP_003600845.2	84.211	361	41	3	1	354	1	352	0.0	613

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0416380	sp\|Q9FLJ2\|NC100_ARATH	45.326	353	156	10	13	354	10	336	4.15e-88	271

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0416380	G7JAN2	84.211	361	41	3	1	354	1	352	0.0	613

TFs/TRs:

Gene ID	Type	Classification
Msa0416380	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003470	Msa0416380	0.846636	1.917889e-59	-8.615850e-47
Msa0008850	Msa0416380	0.812942	3.289422e-51	-8.615850e-47
Msa0017120	Msa0416380	0.828470	8.830998e-55	-8.615850e-47
Msa0041540	Msa0416380	0.840593	7.917643e-58	-8.615850e-47
Msa0043680	Msa0416380	0.802185	6.323595e-49	-8.615850e-47
Msa0065390	Msa0416380	0.844340	8.034284e-59	-8.615850e-47
Msa0089210	Msa0416380	0.812509	4.090299e-51	-8.615850e-47
Msa0094420	Msa0416380	0.809768	1.607530e-50	-8.615850e-47
Msa0103780	Msa0416380	0.802213	6.242731e-49	-8.615850e-47
Msa0110710	Msa0416380	0.842704	2.198516e-58	-8.615850e-47
Msa0135980	Msa0416380	0.841575	4.372325e-58	-8.615850e-47
Msa0141670	Msa0416380	0.804438	2.159667e-49	-8.615850e-47
Msa0146020	Msa0416380	0.804148	2.482659e-49	-8.615850e-47
Msa0146470	Msa0416380	0.834880	2.320386e-56	-8.615850e-47
Msa0150210	Msa0416380	0.824732	6.883763e-54	-8.615850e-47
Msa0157020	Msa0416380	0.822405	2.411151e-53	-8.615850e-47
Msa0185390	Msa0416380	0.808773	2.627097e-50	-8.615850e-47
Msa0207000	Msa0416380	0.814983	1.166894e-51	-8.615850e-47
Msa0223280	Msa0416380	0.803123	4.050130e-49	-8.615850e-47
Msa0230400	Msa0416380	0.822243	2.629636e-53	-8.615850e-47
Msa0416380	Msa0417630	0.834510	2.875706e-56	-8.615850e-47
Msa0416380	Msa0421800	0.800989	1.112673e-48	-8.615850e-47
Msa0416380	Msa0436460	0.800445	1.436689e-48	-8.615850e-47
Msa0416380	Msa0467800	0.801294	9.634471e-49	-8.615850e-47
Msa0416380	Msa0473530	0.807422	5.095381e-50	-8.615850e-47
Msa0416380	Msa0484690	0.800937	1.140190e-48	-8.615850e-47
Msa0416380	Msa0524090	0.817338	3.473547e-52	-8.615850e-47
Msa0416380	Msa0524120	0.812745	3.632400e-51	-8.615850e-47
Msa0416380	Msa0538570	0.822128	2.796129e-53	-8.615850e-47
Msa0416380	Msa0546740	0.834737	2.521640e-56	-8.615850e-47
Msa0416380	Msa0576420	0.800169	1.634850e-48	-8.615850e-47
Msa0416380	Msa0594390	0.805727	1.160923e-49	-8.615850e-47
Msa0416380	Msa0600390	0.806061	9.878593e-50	-8.615850e-47
Msa0416380	Msa0606060	0.819272	1.266839e-52	-8.615850e-47
Msa0416380	Msa0614230	0.814410	1.562539e-51	-8.615850e-47
Msa0416380	Msa0619330	0.835894	1.286445e-56	-8.615850e-47
Msa0416380	Msa0638710	0.805070	1.594251e-49	-8.615850e-47
Msa0416380	Msa0640880	0.815171	1.059660e-51	-8.615850e-47
Msa0416380	Msa0642650	0.808614	2.839864e-50	-8.615850e-47
Msa0416380	Msa0660820	0.800417	1.455560e-48	-8.615850e-47
Msa0416380	Msa0663090	0.814389	1.579830e-51	-8.615850e-47
Msa0416380	Msa0667220	0.817836	2.682564e-52	-8.615850e-47
Msa0416380	Msa0681890	0.839017	2.037782e-57	-8.615850e-47
Msa0416380	Msa0686610	0.824398	8.248994e-54	-8.615850e-47
Msa0416380	Msa0703720	0.805447	1.328927e-49	-8.615850e-47
Msa0416380	Msa0703760	0.800829	1.199351e-48	-8.615850e-47
Msa0416380	Msa0803130	0.807508	4.884274e-50	-8.615850e-47
Msa0416380	Msa0804110	0.809542	1.797428e-50	-8.615850e-47
Msa0416380	Msa0841490	0.804502	2.095130e-49	-8.615850e-47
Msa0416380	Msa0906720	0.825346	4.928513e-54	-8.615850e-47
Msa0416380	Msa0922540	0.804155	2.474081e-49	-8.615850e-47
Msa0416380	Msa0925160	0.816476	5.422339e-52	-8.615850e-47
Msa0416380	Msa0930330	0.807391	5.173146e-50	-8.615850e-47
Msa0416380	Msa0931480	0.821224	4.523629e-53	-8.615850e-47
Msa0416380	Msa0955260	0.809095	2.240807e-50	-8.615850e-47
Msa0416380	Msa0955310	0.806465	8.116960e-50	-8.615850e-47
Msa0416380	Msa0958020	0.840871	6.698862e-58	-8.615850e-47
Msa0416380	Msa0975910	0.806793	6.921641e-50	-8.615850e-47
Msa0416380	Msa0990520	0.829125	6.132620e-55	-8.615850e-47
Msa0416380	Msa0992570	0.810242	1.270274e-50	-8.615850e-47
Msa0416380	Msa0992590	0.826489	2.638164e-54	-8.615850e-47
Msa0416380	Msa1002040	0.833774	4.397358e-56	-8.615850e-47
Msa0416380	Msa1018790	0.804582	2.015833e-49	-8.615850e-47
Msa0416380	Msa1027790	0.821284	4.380768e-53	-8.615850e-47
Msa0416380	Msa1112610	0.830041	3.671822e-55	-8.615850e-47
Msa0416380	Msa1166180	0.818138	2.291393e-52	-8.615850e-47
Msa0416380	Msa1166280	0.809001	2.347863e-50	-8.615850e-47
Msa0416380	Msa1171340	0.802121	6.519979e-49	-8.615850e-47
Msa0416380	Msa1200920	0.802793	4.739582e-49	-8.615850e-47
Msa0416380	Msa1219250	0.828562	8.388976e-55	-8.615850e-47
Msa0416380	Msa1220450	-0.805458	1.321829e-49	-8.615850e-47
Msa0416380	Msa1223840	0.805264	1.451551e-49	-8.615850e-47
Msa0416380	Msa1263030	0.802008	6.877075e-49	-8.615850e-47
Msa0416380	Msa1284030	0.806551	7.788199e-50	-8.615850e-47
Msa0416380	Msa1323060	0.818292	2.115165e-52	-8.615850e-47
Msa0416380	Msa1341930	0.804997	1.651299e-49	-8.615850e-47
Msa0416380	Msa1354040	0.817358	3.436544e-52	-8.615850e-47
Msa0416380	Msa1367940	0.804673	1.930053e-49	-8.615850e-47
Msa0416380	Msa1373510	0.800891	1.165044e-48	-8.615850e-47
Msa0416380	Msa1374440	0.803854	2.857468e-49	-8.615850e-47
Msa0416380	Msa1376530	0.803603	3.221517e-49	-8.615850e-47
Msa0416380	Msa1379990	0.804189	2.434569e-49	-8.615850e-47
Msa0416380	Msa1381130	0.806105	9.666950e-50	-8.615850e-47
Msa0416380	Msa1405770	0.839426	1.596125e-57	-8.615850e-47
Msa0416380	Msa1410170	0.800069	1.712862e-48	-8.615850e-47
Msa0257310	Msa0416380	0.832308	1.017891e-55	-8.615850e-47
Msa0259980	Msa0416380	0.802692	4.973026e-49	-8.615850e-47
Msa0274780	Msa0416380	0.821295	4.356863e-53	-8.615850e-47
Msa0301180	Msa0416380	0.800612	1.328276e-48	-8.615850e-47
Msa0339860	Msa0416380	0.810038	1.406205e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0416380	MtrunA17_Chr7g0217721	72.872	376	56	5	1	354	1	352	0.0	530
Msa0416380	MtrunA17_Chr3g0113001	84.228	298	31	3	64	354	10	298	2.79e-178	496
Msa0416380	MtrunA17_Chr3g0113031	83.571	280	25	5	83	354	4	270	1.42e-160	450
Msa0416380	MtrunA17_Chr7g0217711	83.030	165	22	1	1	159	1	165	3.41e-98	288
Msa0416380	MtrunA17_Chr6g0453451	48.011	352	127	8	14	354	15	321	1.49e-97	292
Msa0416380	MtrunA17_Chr4g0060931	45.706	361	165	11	13	354	11	359	4.17e-87	266
Msa0416380	MtrunA17_Chr3g0091921	56.561	221	91	3	5	224	2	218	1.53e-78	243
Msa0416380	MtrunA17_Chr2g0316971	68.987	158	46	2	19	174	23	179	4.62e-74	234
Msa0416380	MtrunA17_Chr6g0461661	58.115	191	77	2	14	202	13	202	2.46e-72	229
Msa0416380	MtrunA17_Chr7g0253011	60.795	176	64	3	5	176	3	177	4.34e-70	224
Msa0416380	MtrunA17_Chr6g0484441	63.291	158	53	2	19	176	5	157	3.76e-68	217
Msa0416380	MtrunA17_Chr1g0147421	54.455	202	83	4	19	217	27	222	2.51e-67	216
Msa0416380	MtrunA17_Chr3g0139331	52.821	195	76	4	19	202	11	200	1.74e-65	211
Msa0416380	MtrunA17_Chr3g0144271	62.667	150	50	3	1	144	2	151	4.05e-59	196
Msa0416380	MtrunA17_Chr2g0312321	54.777	157	65	3	16	171	8	159	1.47e-55	184
Msa0416380	MtrunA17_Chr5g0417791	51.534	163	78	1	17	178	1	163	5.31e-55	181
Msa0416380	MtrunA17_Chr4g0056541	54.777	157	57	3	20	170	8	156	3.28e-54	182
Msa0416380	MtrunA17_Chr4g0018391	38.889	288	132	10	20	279	8	279	3.54e-54	181
Msa0416380	MtrunA17_Chr5g0398971	48.756	201	85	6	20	208	8	202	4.16e-54	181
Msa0416380	MtrunA17_Chr8g0359921	50.932	161	78	1	16	176	11	170	7.10e-54	180
Msa0416380	MtrunA17_Chr8g0346001	50.829	181	79	3	14	184	10	190	8.00e-54	183
Msa0416380	MtrunA17_Chr4g0017921	57.862	159	58	2	20	175	9	161	8.76e-54	181
Msa0416380	MtrunA17_Chr4g0042561	50.568	176	81	3	18	188	8	182	1.18e-53	177
Msa0416380	MtrunA17_Chr3g0128151	50.000	182	84	3	19	198	22	198	8.44e-53	183
Msa0416380	MtrunA17_Chr1g0183741	40.756	238	113	7	19	254	10	221	1.06e-52	175
Msa0416380	MtrunA17_Chr2g0309331	41.304	276	124	11	16	269	7	266	3.29e-52	176
Msa0416380	MtrunA17_Chr7g0252971	48.555	173	79	2	12	174	1	173	1.15e-51	174
Msa0416380	MtrunA17_Chr5g0428991	52.695	167	67	3	18	175	24	187	2.17e-51	180
Msa0416380	MtrunA17_Chr8g0384721	48.851	174	81	3	17	186	5	174	2.29e-51	172
Msa0416380	MtrunA17_Chr2g0318081	49.689	161	78	1	16	176	13	170	2.89e-51	174
Msa0416380	MtrunA17_Chr3g0124761	49.677	155	77	1	16	170	4	157	4.67e-51	171
Msa0416380	MtrunA17_Chr1g0200561	51.592	157	62	3	20	170	20	168	6.46e-51	173
Msa0416380	MtrunA17_Chr3g0128111	52.147	163	66	3	22	175	45	204	1.04e-50	169
Msa0416380	MtrunA17_Chr5g0405211	43.069	202	98	4	12	204	1	194	4.10e-50	171
Msa0416380	MtrunA17_Chr8g0372121	51.948	154	66	3	20	170	7	155	8.26e-50	169
Msa0416380	MtrunA17_Chr7g0263931	50.920	163	77	2	11	170	3	165	8.65e-50	169
Msa0416380	MtrunA17_Chr6g0481091	53.205	156	68	2	17	170	4	156	1.56e-49	166
Msa0416380	MtrunA17_Chr2g0318101	46.784	171	81	2	15	175	11	181	1.70e-49	169
Msa0416380	MtrunA17_Chr2g0309891	51.875	160	65	3	17	170	4	157	3.60e-49	168
Msa0416380	MtrunA17_Chr7g0261411	49.342	152	68	2	19	168	10	154	5.32e-49	166
Msa0416380	MtrunA17_Chr3g0130731	49.032	155	78	1	16	170	4	157	1.21e-48	165
Msa0416380	MtrunA17_Chr5g0433781	48.000	175	86	2	17	189	4	175	3.75e-48	172
Msa0416380	MtrunA17_Chr4g0047841	46.023	176	73	3	19	172	15	190	3.82e-48	166
Msa0416380	MtrunA17_Chr7g0214071	50.898	167	70	5	13	176	9	166	4.93e-48	162
Msa0416380	MtrunA17_Chr3g0109821	51.923	156	71	2	17	170	4	157	6.50e-48	171
Msa0416380	MtrunA17_Chr8g0361731	47.024	168	76	4	15	172	11	175	4.75e-46	161
Msa0416380	MtrunA17_Chr2g0326361	50.000	152	73	2	19	167	14	165	4.97e-46	159
Msa0416380	MtrunA17_Chr1g0197361	42.534	221	114	7	22	238	11	222	5.04e-46	165
Msa0416380	MtrunA17_Chr8g0364791	45.562	169	86	3	18	184	5	169	1.33e-45	161
Msa0416380	MtrunA17_Chr6g0453131	46.875	160	74	3	22	172	18	175	6.51e-45	158
Msa0416380	MtrunA17_Chr4g0054791	40.670	209	115	4	15	217	2	207	2.19e-44	155
Msa0416380	MtrunA17_Chr5g0417001	46.108	167	78	4	15	172	11	174	2.38e-44	157
Msa0416380	MtrunA17_Chr3g0130101	44.571	175	90	4	12	184	1	170	1.25e-43	154
Msa0416380	MtrunA17_Chr8g0384201	44.444	171	85	4	18	184	5	169	1.88e-43	156
Msa0416380	MtrunA17_Chr3g0092671	47.879	165	78	4	22	183	8	167	2.59e-43	157
Msa0416380	MtrunA17_Chr5g0400461	47.531	162	70	3	19	171	6	161	5.13e-43	152
Msa0416380	MtrunA17_Chr1g0201021	48.795	166	75	4	22	183	22	181	4.57e-42	154
Msa0416380	MtrunA17_Chr4g0076731	36.131	274	148	7	22	292	57	306	9.99e-42	150
Msa0416380	MtrunA17_Chr2g0311661	42.188	192	94	6	1	176	1	191	1.65e-41	147
Msa0416380	MtrunA17_Chr2g0311651	43.158	190	84	6	1	170	1	186	2.22e-41	147
Msa0416380	MtrunA17_Chr5g0442771	43.023	172	87	4	8	170	9	178	3.01e-41	146
Msa0416380	MtrunA17_Chr1g0197351	45.882	170	86	3	21	185	44	212	7.45e-39	144
Msa0416380	MtrunA17_Chr8g0345671	54.198	131	54	5	20	145	12	141	5.32e-37	137
Msa0416380	MtrunA17_Chr8g0385991	41.875	160	87	3	12	167	7	164	1.14e-36	132
Msa0416380	MtrunA17_Chr4g0038751	39.779	181	94	4	1	178	1	169	1.33e-36	134
Msa0416380	MtrunA17_Chr8g0345691	46.753	154	68	7	20	168	13	157	4.86e-35	132
Msa0416380	MtrunA17_Chr3g0131911	42.169	166	87	4	12	170	7	170	8.80e-35	127
Msa0416380	MtrunA17_Chr3g0113041	86.154	65	9	0	1	65	1	65	4.86e-34	120
Msa0416380	MtrunA17_Chr3g0113011	81.538	65	12	0	1	65	1	65	1.54e-33	119
Msa0416380	MtrunA17_Chr4g0026141	42.038	157	83	4	19	168	5	160	1.22e-32	122
Msa0416380	MtrunA17_Chr2g0321741	50.000	106	52	1	38	142	11	116	9.95e-32	122
Msa0416380	MtrunA17_Chr2g0321631	45.038	131	65	4	20	143	5	135	2.02e-30	116
Msa0416380	MtrunA17_Chr7g0266701	39.053	169	94	6	19	178	4	172	3.28e-29	113
Msa0416380	MtrunA17_Chr8g0345711	46.512	129	63	5	19	142	12	139	6.99e-29	110
Msa0416380	MtrunA17_Chr8g0345701	47.183	142	53	7	20	142	8	146	1.05e-27	107
Msa0416380	MtrunA17_Chr8g0345721	39.103	156	60	5	21	142	37	191	3.40e-26	103
Msa0416380	MtrunA17_Chr8g0345731	42.537	134	70	4	19	145	24	157	7.29e-26	102
Msa0416380	MtrunA17_Chr4g0050701	31.915	188	115	3	19	201	11	190	1.18e-24	99.4
Msa0416380	MtrunA17_Chr8g0345741	50.505	99	44	4	51	145	24	121	5.78e-24	96.3
Msa0416380	MtrunA17_Chr7g0243371	54.667	75	32	1	72	144	17	91	4.60e-23	92.8
Msa0416380	MtrunA17_Chr3g0130321	35.465	172	84	7	15	171	3	162	1.85e-20	88.2
Msa0416380	MtrunA17_Chr8g0384351	37.267	161	75	6	17	177	8	142	2.28e-19	84.7
Msa0416380	MtrunA17_Chr7g0251661	35.075	134	81	5	12	142	3	133	4.11e-17	77.8
Msa0416380	MtrunA17_Chr7g0251651	32.609	138	87	5	8	142	7	141	6.77e-17	78.2
Msa0416380	MtrunA17_Chr2g0282871	34.356	163	88	5	2	147	36	196	3.77e-16	78.2
Msa0416380	MtrunA17_Chr4g0046431	30.729	192	106	6	2	174	51	234	1.29e-15	76.6
Msa0416380	MtrunA17_Chr7g0251671	31.387	137	88	4	12	145	3	136	1.66e-14	70.5
Msa0416380	MtrunA17_Chr2g0324961	34.028	144	74	5	19	144	49	189	1.31e-13	70.5
Msa0416380	MtrunA17_Chr8g0389661	31.818	176	83	8	19	168	47	211	1.07e-12	68.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0416380	AT5G61430.1	45.326	353	156	10	13	354	10	336	4.22e-89	271
Msa0416380	AT5G07680.1	45.402	348	161	8	10	354	8	329	4.11e-86	263
Msa0416380	AT5G07680.2	46.018	339	154	8	19	354	3	315	8.05e-85	259
Msa0416380	AT3G29035.1	46.205	303	119	8	3	296	8	275	1.16e-74	234
Msa0416380	AT5G39610.1	66.667	165	54	1	13	177	14	177	5.64e-74	231
Msa0416380	AT5G18270.1	66.038	159	52	2	15	172	17	174	4.33e-72	228
Msa0416380	AT5G18270.2	66.038	159	52	2	15	172	17	174	5.92e-72	227
Msa0416380	AT5G53950.1	68.831	154	45	2	19	170	17	169	7.25e-71	226
Msa0416380	AT3G04060.1	63.855	166	58	2	7	171	8	172	1.20e-70	224
Msa0416380	AT2G24430.2	61.176	170	60	2	9	176	6	171	1.12e-68	218
Msa0416380	AT2G24430.1	61.176	170	60	2	9	176	6	171	1.12e-68	218
Msa0416380	AT3G18400.1	55.801	181	76	1	19	199	5	181	1.85e-68	218
Msa0416380	AT3G15170.1	63.580	162	55	3	11	170	13	172	1.47e-66	213
Msa0416380	AT1G76420.1	62.338	154	52	2	19	170	22	171	1.02e-65	211
Msa0416380	AT5G61430.2	42.809	299	134	10	67	354	1	273	6.86e-64	204
Msa0416380	AT1G56010.2	37.318	343	176	12	1	325	1	322	8.17e-61	198
Msa0416380	AT3G12977.1	50.625	160	77	1	19	178	18	175	1.32e-57	188
Msa0416380	AT2G46770.1	43.256	215	102	4	14	214	11	219	7.55e-55	184
Msa0416380	AT4G10350.1	57.233	159	62	2	20	175	10	165	3.08e-54	182
Msa0416380	AT1G12260.2	54.545	154	62	2	20	170	8	156	3.58e-53	179
Msa0416380	AT4G35580.1	48.649	185	89	3	19	200	9	190	4.23e-53	183
Msa0416380	AT4G35580.2	48.649	185	89	3	19	200	9	190	5.29e-53	183
Msa0416380	AT1G12260.1	54.545	154	62	2	20	170	8	156	5.84e-53	180
Msa0416380	AT4G35580.3	48.649	185	89	3	19	200	9	190	6.08e-53	183
Msa0416380	AT3G61910.1	46.231	199	91	5	14	199	6	201	8.36e-53	177
Msa0416380	AT1G62700.1	53.459	159	60	3	18	170	6	156	2.21e-52	178
Msa0416380	AT1G62700.2	53.459	159	60	3	18	170	6	156	2.21e-52	178
Msa0416380	AT1G33280.1	55.346	159	62	3	20	175	9	161	2.50e-52	176
Msa0416380	AT5G08790.1	39.286	252	140	5	16	258	4	251	3.01e-52	175
Msa0416380	AT4G27410.2	51.899	158	67	3	16	170	11	162	3.82e-52	175
Msa0416380	AT1G33060.1	53.459	159	67	3	19	173	24	179	4.71e-52	182
Msa0416380	AT1G33060.2	53.459	159	67	3	19	173	24	179	5.27e-52	182
Msa0416380	AT1G77450.1	50.000	154	76	1	17	170	8	160	2.19e-51	171
Msa0416380	AT1G32770.1	46.411	209	97	6	14	211	11	215	5.79e-51	174
Msa0416380	AT5G66300.1	51.613	155	68	2	19	170	12	162	8.43e-51	171
Msa0416380	AT3G04070.2	51.176	170	74	3	13	173	4	173	9.62e-51	172
Msa0416380	AT1G01720.1	35.235	298	161	7	14	292	2	286	1.73e-50	170
Msa0416380	AT3G15500.1	49.689	161	78	2	16	176	11	168	2.74e-50	171
Msa0416380	AT1G71930.2	49.677	155	70	3	19	170	9	158	4.10e-50	171
Msa0416380	AT1G71930.1	49.677	155	70	3	19	170	9	158	4.10e-50	171
Msa0416380	AT1G52890.1	50.311	161	77	2	16	176	11	168	5.02e-50	170
Msa0416380	AT5G62380.2	52.903	155	65	3	19	170	7	156	5.18e-50	171
Msa0416380	AT5G62380.1	52.903	155	65	3	19	170	7	156	5.18e-50	171
Msa0416380	AT2G18060.3	49.091	165	74	3	15	175	5	163	8.62e-50	171
Msa0416380	AT2G18060.1	49.091	165	74	3	15	175	5	163	8.62e-50	171
Msa0416380	AT4G36160.1	50.311	161	70	3	14	170	5	159	1.18e-49	171
Msa0416380	AT4G36160.3	50.311	161	70	3	14	170	5	159	1.18e-49	171
Msa0416380	AT3G03200.1	54.777	157	65	3	17	170	4	157	1.27e-49	173
Msa0416380	AT4G36160.2	50.311	161	70	3	14	170	9	163	1.54e-49	171
Msa0416380	AT1G65910.1	46.196	184	92	3	17	198	4	182	1.97e-49	175
Msa0416380	AT5G63790.1	50.292	171	75	4	11	176	43	208	2.26e-49	168
Msa0416380	AT5G63790.2	50.292	171	75	4	11	176	53	218	2.27e-49	168
Msa0416380	AT3G17730.1	48.214	168	82	2	17	182	4	168	3.34e-49	166
Msa0416380	AT1G61110.1	45.902	183	79	3	5	172	2	179	6.18e-49	167
Msa0416380	AT1G69490.1	50.617	162	77	2	19	178	9	169	6.83e-49	166
Msa0416380	AT5G17260.1	53.503	157	67	3	17	170	4	157	1.02e-48	171
Msa0416380	AT5G24590.2	38.911	257	123	8	19	269	13	241	1.19e-48	170
Msa0416380	AT3G04070.1	45.699	186	76	3	13	173	4	189	1.84e-48	167
Msa0416380	AT2G33480.1	52.229	157	63	3	17	170	13	160	2.30e-48	164
Msa0416380	AT4G27410.3	46.857	175	67	4	16	170	11	179	1.20e-47	164
Msa0416380	AT2G33480.2	52.229	157	61	3	17	170	13	158	1.21e-47	162
Msa0416380	AT3G15510.1	45.562	169	82	2	23	181	21	189	2.42e-47	164
Msa0416380	AT1G54330.1	52.229	157	67	2	17	171	4	154	2.81e-47	162
Msa0416380	AT1G26870.1	46.703	182	82	5	1	172	1	177	3.02e-47	165
Msa0416380	AT4G28530.1	45.614	171	68	4	18	170	9	172	3.51e-47	164
Msa0416380	AT1G79580.3	51.553	161	68	4	16	172	14	168	3.98e-47	164
Msa0416380	AT1G79580.5	51.553	161	68	4	16	172	14	168	3.98e-47	164
Msa0416380	AT1G79580.4	51.553	161	68	4	16	172	14	168	3.98e-47	164
Msa0416380	AT1G79580.2	51.553	161	68	4	16	172	14	168	3.98e-47	164
Msa0416380	AT1G79580.1	51.553	161	68	4	16	172	14	168	3.98e-47	164
Msa0416380	AT5G04410.1	49.390	164	77	3	22	183	12	171	4.39e-47	168
Msa0416380	AT3G49530.2	46.784	171	81	4	4	171	2	165	4.89e-47	164
Msa0416380	AT5G13180.1	47.305	167	79	3	12	176	7	166	5.83e-47	160
Msa0416380	AT3G10500.1	48.193	166	76	4	22	183	12	171	7.07e-47	167
Msa0416380	AT3G49530.1	46.784	171	81	4	4	171	2	165	1.44e-46	165
Msa0416380	AT3G10480.2	50.595	168	73	4	22	185	30	191	1.82e-46	164
Msa0416380	AT3G10480.1	50.296	169	73	4	22	185	30	192	7.18e-46	162
Msa0416380	AT2G27300.1	56.923	130	52	4	19	146	15	142	1.24e-45	159
Msa0416380	AT3G10490.1	48.521	169	76	4	22	185	30	192	2.56e-45	155
Msa0416380	AT5G46590.1	48.387	155	75	3	19	170	6	158	1.48e-44	155
Msa0416380	AT2G43000.1	33.216	283	152	7	1	283	1	246	2.19e-44	154
Msa0416380	AT5G46590.2	52.273	132	60	2	19	147	6	137	4.00e-44	154
Msa0416380	AT3G10490.2	48.521	169	76	4	22	185	30	192	4.13e-44	158
Msa0416380	AT5G09330.5	43.529	170	90	3	16	183	3	168	4.32e-44	159
Msa0416380	AT5G09330.2	43.529	170	90	3	16	183	3	168	4.32e-44	159
Msa0416380	AT5G09330.4	43.529	170	90	3	16	183	3	168	4.32e-44	159
Msa0416380	AT5G09330.3	43.529	170	90	3	16	183	3	168	4.32e-44	159
Msa0416380	AT5G09330.1	43.529	170	90	3	16	183	3	168	4.32e-44	159
Msa0416380	AT5G39820.1	43.575	179	80	4	15	173	17	194	3.41e-43	152
Msa0416380	AT5G64060.1	42.941	170	91	3	16	183	3	168	8.42e-43	152
Msa0416380	AT1G52880.1	46.541	159	76	2	23	172	21	179	2.73e-41	147
Msa0416380	AT4G17980.1	46.795	156	78	3	19	170	6	160	2.80e-41	145
Msa0416380	AT2G02450.1	46.667	150	74	2	22	170	54	198	3.17e-41	149
Msa0416380	AT2G02450.2	46.667	150	74	2	22	170	54	198	3.67e-41	149
Msa0416380	AT4G17980.2	47.134	157	76	4	19	170	6	160	4.57e-41	146
Msa0416380	AT1G56010.1	37.638	271	141	8	67	325	1	255	3.68e-40	142
Msa0416380	AT3G10480.3	43.564	202	70	5	22	185	30	225	3.70e-40	149
Msa0416380	AT5G22290.1	48.201	139	69	3	12	149	16	152	7.93e-40	144
Msa0416380	AT3G44290.2	49.242	132	65	2	19	149	15	145	9.10e-40	140
Msa0416380	AT1G34190.1	44.970	169	86	4	18	183	14	178	3.07e-39	146
Msa0416380	AT1G32510.1	44.444	162	79	3	19	171	6	165	3.21e-39	140
Msa0416380	AT1G34180.3	44.379	169	87	4	18	183	14	178	6.28e-39	144
Msa0416380	AT3G44290.1	49.242	132	65	2	19	149	15	145	9.87e-39	141
Msa0416380	AT1G34180.1	45.029	171	83	5	18	183	14	178	2.07e-38	144
Msa0416380	AT3G12910.1	35.361	263	118	9	13	225	16	276	3.25e-38	139
Msa0416380	AT3G12977.2	54.867	113	49	1	66	178	12	122	4.58e-38	136
Msa0416380	AT2G17040.1	41.212	165	85	3	17	178	5	160	5.57e-38	137
Msa0416380	AT1G34180.4	40.884	181	88	4	18	183	14	190	9.35e-37	138
Msa0416380	AT1G34180.2	41.530	183	84	5	18	183	14	190	2.54e-36	139
Msa0416380	AT1G32870.2	45.238	168	78	5	22	183	13	172	4.43e-35	134
Msa0416380	AT1G32870.1	45.238	168	78	5	22	183	13	172	4.76e-35	134
Msa0416380	AT4G10350.2	57.391	115	43	2	64	175	7	118	5.46e-35	130
Msa0416380	AT1G32870.3	45.238	168	78	5	22	183	49	208	6.63e-35	134
Msa0416380	AT5G04395.1	44.138	145	65	2	19	147	28	172	2.51e-32	120
Msa0416380	AT2G33480.3	55.882	102	36	2	72	170	8	103	1.26e-31	119
Msa0416380	AT4G28530.2	43.182	132	57	3	18	131	9	140	6.97e-29	114
Msa0416380	AT4G01550.1	45.926	135	67	4	17	145	2	136	3.27e-28	114
Msa0416380	AT5G22380.1	36.158	177	101	6	22	189	8	181	2.18e-27	108
Msa0416380	AT4G01520.1	41.912	136	72	5	17	145	2	137	1.05e-26	108
Msa0416380	AT1G02230.1	42.759	145	71	7	20	157	4	143	1.06e-26	108
Msa0416380	AT3G04420.2	41.732	127	70	2	20	142	4	130	1.80e-26	107
Msa0416380	AT3G04420.1	41.732	127	70	2	20	142	4	130	4.37e-26	107
Msa0416380	AT4G01540.4	43.939	132	65	6	22	145	7	137	6.93e-26	107
Msa0416380	AT3G44350.2	33.871	186	111	5	21	198	7	188	1.29e-25	103
Msa0416380	AT4G01540.2	43.939	132	65	6	22	145	7	137	1.32e-25	107
Msa0416380	AT4G01540.3	43.939	132	65	6	22	145	7	137	1.69e-25	106
Msa0416380	AT4G01540.1	43.939	132	65	6	22	145	7	137	2.03e-25	107
Msa0416380	AT3G44350.1	40.310	129	71	3	21	143	7	135	6.12e-25	99.4
Msa0416380	AT3G10490.4	53.608	97	36	3	92	185	2	92	2.37e-24	102
Msa0416380	AT3G10490.3	53.608	97	36	3	92	185	2	92	2.37e-24	102
Msa0416380	AT1G02250.1	31.481	216	120	8	20	226	4	200	5.89e-23	98.6
Msa0416380	AT1G02220.1	39.370	127	70	3	20	142	4	127	1.03e-22	98.6
Msa0416380	AT2G18060.2	52.500	80	31	2	97	175	2	75	1.99e-20	90.1
Msa0416380	AT2G43000.2	30.392	204	106	6	80	283	1	168	4.64e-20	87.4
Msa0416380	AT5G64530.1	31.214	173	93	5	19	178	3	162	6.02e-19	84.0
Msa0416380	AT5G14000.1	32.948	173	105	4	14	183	10	174	6.70e-19	84.3
Msa0416380	AT1G01010.1	36.301	146	73	6	21	152	5	144	9.31e-19	87.4
Msa0416380	AT5G64530.2	37.405	131	64	7	19	145	3	119	2.10e-18	81.6
Msa0416380	AT5G14000.2	35.556	135	83	2	14	146	10	142	3.27e-18	81.3
Msa0416380	AT3G56530.1	34.848	132	81	3	15	142	48	178	1.46e-17	82.8
Msa0416380	AT5G50820.1	33.577	137	79	4	12	144	10	138	1.40e-16	77.4
Msa0416380	AT5G22290.2	57.692	52	22	0	98	149	2	53	5.31e-16	77.0
Msa0416380	AT3G04430.1	37.500	136	69	5	23	143	2	136	6.29e-16	75.9
Msa0416380	AT3G55210.1	32.143	140	81	3	19	144	11	150	6.08e-14	71.6
Msa0416380	AT4G29230.1	32.402	179	83	9	17	168	46	213	1.17e-12	69.3
Msa0416380	AT4G29230.2	32.402	179	83	9	17	168	45	212	1.21e-12	69.3
Msa0416380	AT5G56620.3	33.951	162	71	7	17	147	41	197	1.39e-12	68.9
Msa0416380	AT5G56620.2	33.951	162	71	7	17	147	41	197	1.40e-12	68.6
Msa0416380	AT5G56620.1	33.951	162	71	7	17	147	41	197	2.26e-12	68.2
Msa0416380	AT4G29230.3	32.402	179	83	9	17	168	46	213	2.95e-12	67.8
Msa0416380	AT5G14490.1	32.192	146	77	5	19	145	58	200	1.07e-11	65.9
Msa0416380	AT5G14490.4	32.192	146	77	5	19	145	55	197	1.17e-11	65.5
Msa0416380	AT5G14490.3	32.192	146	77	5	19	145	58	200	1.46e-11	65.5
Msa0416380	AT5G14490.2	31.250	144	81	4	19	145	55	197	2.75e-11	63.9

Find 73 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAAGGGAAATGCATTAAT+TGG	0.121823	3_2:-63181967	Msa0416380:CDS
TTATTCAGAGCTGGCTAAAA+TGG	0.240651	3_2:-63182106	Msa0416380:intron
AAATGAAAAGGTCAAATTTC+CGG	0.296027	3_2:-63183107	Msa0416380:CDS
GGATAATTGTGGAAAGAAAA+TGG	0.302070	3_2:-63181184	Msa0416380:CDS
AGAGATTCATTAGTATTTGA+TGG	0.305472	3_2:+63181120	None:intergenic
GATATCTCATCTGTGGTATA+TGG	0.312060	3_2:-63180739	Msa0416380:CDS
AAAACTCTTGGTTTAGGCTT+TGG	0.320721	3_2:+63180785	None:intergenic
TTTGGTTTCTCTGTTTGATT+TGG	0.323737	3_2:+63181024	None:intergenic
CAAAAGAAAACTCTTGGTTT+AGG	0.327229	3_2:+63180779	None:intergenic
TAGTAGCTCTATTGGTCCTT+TGG	0.349158	3_2:+63182031	None:intergenic
TATTGGTCCTTTGGCCAGTT+GGG	0.376646	3_2:+63182040	None:intergenic
GGCATGTTTCAAAGGTGGTC+TGG	0.377514	3_2:-63180712	Msa0416380:CDS
CAAGAATTGTCATCAGCTTC+AGG	0.379981	3_2:-63180685	Msa0416380:CDS
CTAAAATGGGAGAAACAAAA+TGG	0.380978	3_2:-63182092	Msa0416380:CDS
GAGCTACTAATGCTGGCTAT+TGG	0.387868	3_2:-63182017	Msa0416380:CDS
GCCAGCATTAGTAGCTCTAT+TGG	0.388516	3_2:+63182023	None:intergenic
TTGGTTTAGGCTTTGGTTTG+AGG	0.390632	3_2:+63180792	None:intergenic
TTTCTCTGTTTGATTTGGAT+TGG	0.403637	3_2:+63181029	None:intergenic
TCAAGGGAAATGCATTAATT+GGG	0.420828	3_2:-63181966	Msa0416380:CDS
GCAGTTATTACTTCAGCTAA+AGG	0.433317	3_2:+63180919	None:intergenic
CTCTCCCAAAAGAAAACTCT+TGG	0.435959	3_2:+63180773	None:intergenic
TCATCTGTGGTATATGGAAA+TGG	0.441427	3_2:-63180733	Msa0416380:CDS
AATTCCCGACCATTGAGGTT+TGG	0.446812	3_2:+63180887	None:intergenic
CTATTGGTCCTTTGGCCAGT+TGG	0.450132	3_2:+63182039	None:intergenic
AGAAATCAGAAAGAGTGGTT+TGG	0.458377	3_2:+63181073	None:intergenic
GCATGTTTCAAAGGTGGTCT+GGG	0.461659	3_2:-63180711	Msa0416380:CDS
GTATTCATGCATGACCCAAT+TGG	0.462426	3_2:+63181891	None:intergenic
TATTCAGAGCTGGCTAAAAT+GGG	0.463612	3_2:-63182105	Msa0416380:intron
AAATCAATACCTTGTCAAGA+AGG	0.466786	3_2:-63183047	Msa0416380:CDS
GCTGGCTATTGGAAAGCAAC+AGG	0.467708	3_2:-63182006	Msa0416380:CDS
ACCAATAGAGCTACTAATGC+TGG	0.495849	3_2:-63182024	Msa0416380:CDS
TTGATTTATAAGCTCTTCAT+CGG	0.497039	3_2:+63183063	None:intergenic
TTAGCTGAAGTAATAACTGC+TGG	0.510536	3_2:-63180916	Msa0416380:CDS
TGAACCAAACCTCAATGGTC+GGG	0.515698	3_2:-63180891	Msa0416380:CDS
AGGGAGAGAAAATACCCAAC+TGG	0.520226	3_2:-63182054	Msa0416380:CDS
TTACCATTCCATGTGTGGAT+AGG	0.526862	3_2:+63181836	None:intergenic
GTTTAGGCTTTGGTTTGAGG+TGG	0.531634	3_2:+63180795	None:intergenic
TGGCTTGAACCAAACCTCAA+TGG	0.535838	3_2:-63180896	Msa0416380:CDS
CAGTTGGAGAATGAGAATCT+TGG	0.538735	3_2:-63180820	Msa0416380:CDS
ATGGAAATGGCATGTTTCAA+AGG	0.539060	3_2:-63180720	Msa0416380:CDS
TTTATAAGCTCTTCATCGGT+CGG	0.540210	3_2:+63183067	None:intergenic
GAAAAGGTCAAATTTCCGGC+TGG	0.542041	3_2:-63183103	Msa0416380:CDS
ATGCATGAATACCGATTGGC+GGG	0.543086	3_2:-63181880	Msa0416380:CDS
CAACCTATCCACACATGGAA+TGG	0.547037	3_2:-63181839	Msa0416380:intron
GTCTTTAAGAAGGATAATTG+TGG	0.552416	3_2:-63181195	Msa0416380:CDS
ATCACTGTTGAGGATGCAGT+TGG	0.553870	3_2:-63180836	Msa0416380:CDS
TTGAACCAAACCTCAATGGT+CGG	0.560970	3_2:-63180892	Msa0416380:CDS
AATTGTGGAAAGAAAATGGA+TGG	0.567327	3_2:-63181180	Msa0416380:CDS
CAATATTACCATTCCATGTG+TGG	0.569497	3_2:+63181831	None:intergenic
AAAATGGATGGTTCAAAACA+TGG	0.570089	3_2:-63181168	Msa0416380:CDS
AGAGTGTGTTACCCGCCAAT+CGG	0.575771	3_2:+63181869	None:intergenic
CTCAAGAACAATCACTGTTG+AGG	0.576259	3_2:-63180846	Msa0416380:CDS
TCTCAGTAGAGTCTTTAAGA+AGG	0.576793	3_2:-63181205	Msa0416380:CDS
TATGAATAAGTGTGAACCAT+GGG	0.577620	3_2:-63182981	Msa0416380:CDS
TGGATGGTTCAAAACATGGA+AGG	0.583286	3_2:-63181164	Msa0416380:CDS
TGACGAATTCCCGACCATTG+AGG	0.585386	3_2:+63180882	None:intergenic
ATTTGATGGTCCTTCTCTAG+AGG	0.592265	3_2:+63181134	None:intergenic
AATTCACCTGGCAAATCCCA+TGG	0.596462	3_2:+63182965	None:intergenic
CATGCATGAATACCGATTGG+CGG	0.600090	3_2:-63181881	Msa0416380:CDS
ATGAGAGAAATCAGAAAGAG+TGG	0.605218	3_2:+63181068	None:intergenic
AGGTTTAACTCCTCTAGAGA+AGG	0.606008	3_2:-63181144	Msa0416380:CDS
TGTCATCAACCTTCTTGACA+AGG	0.607463	3_2:+63183038	None:intergenic
GTCATCAGCTTCAGGACATG+TGG	0.608647	3_2:-63180677	Msa0416380:CDS
GGTCATGCATGAATACCGAT+TGG	0.609797	3_2:-63181884	Msa0416380:CDS
TGTGAACCATGGGATTTGCC+AGG	0.615720	3_2:-63182971	Msa0416380:intron
GGAGAGAATCGATAACCAGC+CGG	0.632530	3_2:+63183088	None:intergenic
ATATGAATAAGTGTGAACCA+TGG	0.635343	3_2:-63182982	Msa0416380:CDS
GAAAATACCCAACTGGCCAA+AGG	0.637584	3_2:-63182047	Msa0416380:CDS
ATGTGGTCAATGATAGCTTG+TGG	0.641641	3_2:-63180660	Msa0416380:CDS
GAAATGGCATGTTTCAAAGG+TGG	0.654634	3_2:-63180717	Msa0416380:CDS
TGATGCTGATATCTCATCTG+TGG	0.688150	3_2:-63180746	Msa0416380:CDS
GAGCACAACCTATCCACACA+TGG	0.690253	3_2:-63181844	Msa0416380:CDS
TACAAAGGAAGAGCGCCGAG+TGG	0.721558	3_2:-63181922	Msa0416380:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAAATTTTTGTCAAAATTA+CGG	+	chr3_2:63182104-63182123	None:intergenic	10.0%
!!!	AATTTACTTTATTTAGAAAA+AGG	+	chr3_2:63182285-63182304	None:intergenic	10.0%
!!	ATTATATTATATTAGTAGTC+TGG	-	chr3_2:63180883-63180902	Msa0416380:CDS	15.0%
!!	AAAATAAAATAAAAACTCCA+AGG	+	chr3_2:63180924-63180943	None:intergenic	15.0%
!!	TTAAAGACATTAAAAACTAA+AGG	-	chr3_2:63180989-63181008	Msa0416380:CDS	15.0%
!!	TAAAGACATTAAAAACTAAA+GGG	-	chr3_2:63180990-63181009	Msa0416380:CDS	15.0%
!!!	AATTGTTTTTCTTTCTATTT+TGG	+	chr3_2:63181318-63181337	None:intergenic	15.0%
!!	AAATAGAAAGAAAAACAATT+TGG	-	chr3_2:63181318-63181337	Msa0416380:intron	15.0%
!!!	TAGTGATTTTGATTTTTTTT+AGG	-	chr3_2:63182219-63182238	Msa0416380:intron	15.0%
!!!	AGTGATTTTGATTTTTTTTA+GGG	-	chr3_2:63182220-63182239	Msa0416380:intron	15.0%
!!	TCACTCTATAAAAAAAAAAA+AGG	+	chr3_2:63182565-63182584	None:intergenic	15.0%
!!!	TTTTTTTTTTATAGAGTGAA+TGG	-	chr3_2:63182566-63182585	Msa0416380:intron	15.0%
!!!	TTTTTTTTTATAGAGTGAAT+GGG	-	chr3_2:63182567-63182586	Msa0416380:intron	15.0%
!!	GAATGTTTACAATCAAAAAA+TGG	-	chr3_2:63180665-63180684	Msa0416380:CDS	20.0%
!!	TCAAAAAATGGAAAATGAAA+AGG	-	chr3_2:63180677-63180696	Msa0416380:CDS	20.0%
!!	AAAAAAACAATAAATTCACC+TGG	+	chr3_2:63180846-63180865	None:intergenic	20.0%
!!	AAAGACATTAAAAACTAAAG+GGG	-	chr3_2:63180991-63181010	Msa0416380:CDS	20.0%
!!!	TTTTAAAGTTATTATGAGTG+CGG	-	chr3_2:63181591-63181610	Msa0416380:intron	20.0%
!!!	ACTTATGCTTTCTTATTTTT+TGG	-	chr3_2:63181666-63181685	Msa0416380:intron	20.0%
!	AAATGAAAAGGTCAAATTTC+CGG	-	chr3_2:63180689-63180708	Msa0416380:CDS	25.0%
!	TTGATTTATAAGCTCTTCAT+CGG	+	chr3_2:63180736-63180755	None:intergenic	25.0%
!	TAAATTAAGTCTTCTTTGGT+AGG	+	chr3_2:63181275-63181294	None:intergenic	25.0%
!	CACATAAATTAAGTCTTCTT+TGG	+	chr3_2:63181279-63181298	None:intergenic	25.0%
!	CAAAGAAGACTTAATTTATG+TGG	-	chr3_2:63181277-63181296	Msa0416380:intron	25.0%
!	GAAAGAAAAACAATTTGGAA+TGG	-	chr3_2:63181323-63181342	Msa0416380:intron	25.0%
!	TCTAATGTATGTATGTCTTT+CGG	-	chr3_2:63181630-63181649	Msa0416380:intron	25.0%
!!	AAAGACAAAGAGATTTTCAA+GGG	-	chr3_2:63181814-63181833	Msa0416380:intron	25.0%
!	AATTGGGATGAAAAAAACAT+TGG	-	chr3_2:63181846-63181865	Msa0416380:CDS	25.0%
!!!	AAAACATTGGTTTTCTACAA+AGG	-	chr3_2:63181859-63181878	Msa0416380:CDS	25.0%
!	TAAGTTTGACAATAATGACA+CGG	+	chr3_2:63182149-63182168	None:intergenic	25.0%
!	AGAGATTCATTAGTATTTGA+TGG	+	chr3_2:63182679-63182698	None:intergenic	25.0%
!!!	AACATCATTTTGTTTTGAAG+AGG	+	chr3_2:63182854-63182873	None:intergenic	25.0%
!!	TAAACCAAGAGTTTTCTTTT+GGG	-	chr3_2:63183019-63183038	Msa0416380:CDS	25.0%
	AAATCAATACCTTGTCAAGA+AGG	-	chr3_2:63180749-63180768	Msa0416380:CDS	30.0%
	ATATGAATAAGTGTGAACCA+TGG	-	chr3_2:63180814-63180833	Msa0416380:CDS	30.0%
	TATGAATAAGTGTGAACCAT+GGG	-	chr3_2:63180815-63180834	Msa0416380:CDS	30.0%
	ATGCAGTGTTTATTTGATTC+AGG	+	chr3_2:63181168-63181187	None:intergenic	30.0%
	CTAAGGTGTAATTAAACCAT+TGG	+	chr3_2:63181447-63181466	None:intergenic	30.0%
	AGATAACGACAATATCTCTA+AGG	+	chr3_2:63181464-63181483	None:intergenic	30.0%
	TTGTCGTTATCTTACTTTGA+TGG	-	chr3_2:63181472-63181491	Msa0416380:intron	30.0%
!!!	TTTTTTGGTTTATTCAGAGC+TGG	-	chr3_2:63181681-63181700	Msa0416380:intron	30.0%
	CTAAAATGGGAGAAACAAAA+TGG	-	chr3_2:63181704-63181723	Msa0416380:intron	30.0%
!!!	AATGGTATTTTTTCTGTGTG+AGG	-	chr3_2:63181722-63181741	Msa0416380:intron	30.0%
!!!	ATGGTATTTTTTCTGTGTGA+GGG	-	chr3_2:63181723-63181742	Msa0416380:intron	30.0%
!	CAAAGACAAAGAGATTTTCA+AGG	-	chr3_2:63181813-63181832	Msa0416380:intron	30.0%
	TTCAAGGGAAATGCATTAAT+TGG	-	chr3_2:63181829-63181848	Msa0416380:intron	30.0%
	TCAAGGGAAATGCATTAATT+GGG	-	chr3_2:63181830-63181849	Msa0416380:intron	30.0%
	AGGTAATTCTATCAAACACA+TGG	+	chr3_2:63182074-63182093	None:intergenic	30.0%
!!	ACAACTTTTAGAGAAACTAC+TGG	-	chr3_2:63182372-63182391	Msa0416380:intron	30.0%
!	GTCTTTAAGAAGGATAATTG+TGG	-	chr3_2:63182601-63182620	Msa0416380:intron	30.0%
	GGATAATTGTGGAAAGAAAA+TGG	-	chr3_2:63182612-63182631	Msa0416380:intron	30.0%
	AATTGTGGAAAGAAAATGGA+TGG	-	chr3_2:63182616-63182635	Msa0416380:intron	30.0%
	AAAATGGATGGTTCAAAACA+TGG	-	chr3_2:63182628-63182647	Msa0416380:intron	30.0%
!!!	GTTTGGTTTTCACTATTGTA+TGG	+	chr3_2:63182709-63182728	None:intergenic	30.0%
!!	TTTCTCTGTTTGATTTGGAT+TGG	+	chr3_2:63182770-63182789	None:intergenic	30.0%
!	TTTGGTTTCTCTGTTTGATT+TGG	+	chr3_2:63182775-63182794	None:intergenic	30.0%
!	ATGTTGTCATCTTGTGTTTT+TGG	+	chr3_2:63182793-63182812	None:intergenic	30.0%
	CAAAAGAAAACTCTTGGTTT+AGG	+	chr3_2:63183020-63183039	None:intergenic	30.0%
!	CTAAACCAAGAGTTTTCTTT+TGG	-	chr3_2:63183018-63183037	Msa0416380:CDS	30.0%
	TTTATAAGCTCTTCATCGGT+CGG	+	chr3_2:63180732-63180751	None:intergenic	35.0%
	CCAGATCTAATCAATGACTT+TGG	+	chr3_2:63181121-63181140	None:intergenic	35.0%
!	CCAAAGTCATTGATTAGATC+TGG	-	chr3_2:63181118-63181137	Msa0416380:CDS	35.0%
	CAAACAATGTCGTACTAAGA+CGG	-	chr3_2:63181235-63181254	Msa0416380:intron	35.0%
!!	ACAATTTGGAATGGTGCTTT+TGG	-	chr3_2:63181332-63181351	Msa0416380:intron	35.0%
!!	CAATTTGGAATGGTGCTTTT+GGG	-	chr3_2:63181333-63181352	Msa0416380:intron	35.0%
	TGGTGGAAAAAGAAGAAAAG+TGG	-	chr3_2:63181392-63181411	Msa0416380:intron	35.0%
	CACATTTATTAGTGTCGTGT+TGG	+	chr3_2:63181550-63181569	None:intergenic	35.0%
	CAACACGACACTAATAAATG+TGG	-	chr3_2:63181548-63181567	Msa0416380:intron	35.0%
	TTATTCAGAGCTGGCTAAAA+TGG	-	chr3_2:63181690-63181709	Msa0416380:intron	35.0%
	TATTCAGAGCTGGCTAAAAT+GGG	-	chr3_2:63181691-63181710	Msa0416380:intron	35.0%
!!!	CAATTGGTTTTTTCACCACT+CGG	+	chr3_2:63181892-63181911	None:intergenic	35.0%
	GAGTGGTGAAAAAACCAATT+GGG	-	chr3_2:63181891-63181910	Msa0416380:CDS	35.0%
	CAATATTACCATTCCATGTG+TGG	+	chr3_2:63181968-63181987	None:intergenic	35.0%
	GTCAAAATTACGGTAACACA+AGG	+	chr3_2:63182094-63182113	None:intergenic	35.0%
!	TCTCAGTAGAGTCTTTAAGA+AGG	-	chr3_2:63182591-63182610	Msa0416380:intron	35.0%
!	TGGTTTTCACTATTGTATGG+AGG	+	chr3_2:63182706-63182725	None:intergenic	35.0%
	AGAAATCAGAAAGAGTGGTT+TGG	+	chr3_2:63182726-63182745	None:intergenic	35.0%
	ATGAGAGAAATCAGAAAGAG+TGG	+	chr3_2:63182731-63182750	None:intergenic	35.0%
	GCAGTTATTACTTCAGCTAA+AGG	+	chr3_2:63182880-63182899	None:intergenic	35.0%
	TTAGCTGAAGTAATAACTGC+TGG	-	chr3_2:63182880-63182899	Msa0416380:intron	35.0%
	AAAACTCTTGGTTTAGGCTT+TGG	+	chr3_2:63183014-63183033	None:intergenic	35.0%
	GATATCTCATCTGTGGTATA+TGG	-	chr3_2:63183057-63183076	Msa0416380:CDS	35.0%
	TCATCTGTGGTATATGGAAA+TGG	-	chr3_2:63183063-63183082	Msa0416380:CDS	35.0%
	ATGGAAATGGCATGTTTCAA+AGG	-	chr3_2:63183076-63183095	Msa0416380:CDS	35.0%
	TGTCATCAACCTTCTTGACA+AGG	+	chr3_2:63180761-63180780	None:intergenic	40.0%
	TGTTACAGATCTCTAGGCAT+CGG	+	chr3_2:63181089-63181108	None:intergenic	40.0%
	CATCGATGTTACAGATCTCT+AGG	+	chr3_2:63181095-63181114	None:intergenic	40.0%
!	GTCATTGATTAGATCTGGAC+TGG	-	chr3_2:63181123-63181142	Msa0416380:CDS	40.0%
	TAACCCTAAAACACCCTCAT+TGG	-	chr3_2:63181363-63181382	Msa0416380:intron	40.0%
!!!	CTACCAATGAGGGTGTTTTA+GGG	+	chr3_2:63181369-63181388	None:intergenic	40.0%
!!!	TCTACCAATGAGGGTGTTTT+AGG	+	chr3_2:63181370-63181389	None:intergenic	40.0%
!	AAGAAAAGTGGTGACGACTA+GGG	-	chr3_2:63181404-63181423	Msa0416380:intron	40.0%
	CTATGTACCACTGACACATA+AGG	-	chr3_2:63181516-63181535	Msa0416380:intron	40.0%
!	TTATTAGTGTCGTGTTGGTG+CGG	+	chr3_2:63181545-63181564	None:intergenic	40.0%
!	TAGTAGCTCTATTGGTCCTT+TGG	+	chr3_2:63181768-63181787	None:intergenic	40.0%
	ACCAATAGAGCTACTAATGC+TGG	-	chr3_2:63181772-63181791	Msa0416380:intron	40.0%
	CGAGTGGTGAAAAAACCAAT+TGG	-	chr3_2:63181890-63181909	Msa0416380:CDS	40.0%
	GTATTCATGCATGACCCAAT+TGG	+	chr3_2:63181908-63181927	None:intergenic	40.0%
	TTACCATTCCATGTGTGGAT+AGG	+	chr3_2:63181963-63181982	None:intergenic	40.0%
	ACAGATCCTCGATGAATGTT+TGG	+	chr3_2:63182180-63182199	None:intergenic	40.0%
	TGGATGGTTCAAAACATGGA+AGG	-	chr3_2:63182632-63182651	Msa0416380:intron	40.0%
!	AGGTTTAACTCCTCTAGAGA+AGG	-	chr3_2:63182652-63182671	Msa0416380:intron	40.0%
!	ATTTGATGGTCCTTCTCTAG+AGG	+	chr3_2:63182665-63182684	None:intergenic	40.0%
	TTGAACCAAACCTCAATGGT+CGG	-	chr3_2:63182904-63182923	Msa0416380:intron	40.0%
	CTCAAGAACAATCACTGTTG+AGG	-	chr3_2:63182950-63182969	Msa0416380:intron	40.0%
	CAGTTGGAGAATGAGAATCT+TGG	-	chr3_2:63182976-63182995	Msa0416380:CDS	40.0%
!!	TTGGTTTAGGCTTTGGTTTG+AGG	+	chr3_2:63183007-63183026	None:intergenic	40.0%
	CTCTCCCAAAAGAAAACTCT+TGG	+	chr3_2:63183026-63183045	None:intergenic	40.0%
	TGATGCTGATATCTCATCTG+TGG	-	chr3_2:63183050-63183069	Msa0416380:CDS	40.0%
	GAAATGGCATGTTTCAAAGG+TGG	-	chr3_2:63183079-63183098	Msa0416380:CDS	40.0%
	CAAGAATTGTCATCAGCTTC+AGG	-	chr3_2:63183111-63183130	Msa0416380:CDS	40.0%
	ATGTGGTCAATGATAGCTTG+TGG	-	chr3_2:63183136-63183155	Msa0416380:CDS	40.0%
	GAAAAGGTCAAATTTCCGGC+TGG	-	chr3_2:63180693-63180712	Msa0416380:CDS	45.0%
	AATTCACCTGGCAAATCCCA+TGG	+	chr3_2:63180834-63180853	None:intergenic	45.0%
	GGATTTGAAAAGCTACGCCT+TGG	-	chr3_2:63180904-63180923	Msa0416380:CDS	45.0%
	AACACCCTCATTGGTAGATC+TGG	-	chr3_2:63181372-63181391	Msa0416380:intron	45.0%
	TCCACCAGATCTACCAATGA+GGG	+	chr3_2:63181379-63181398	None:intergenic	45.0%
	TTCCACCAGATCTACCAATG+AGG	+	chr3_2:63181380-63181399	None:intergenic	45.0%
!	GAAGAAAAGTGGTGACGACT+AGG	-	chr3_2:63181403-63181422	Msa0416380:intron	45.0%
	AGGGAGAGAAAATACCCAAC+TGG	-	chr3_2:63181742-63181761	Msa0416380:intron	45.0%
	GAAAATACCCAACTGGCCAA+AGG	-	chr3_2:63181749-63181768	Msa0416380:intron	45.0%
	TATTGGTCCTTTGGCCAGTT+GGG	+	chr3_2:63181759-63181778	None:intergenic	45.0%
!	GCCAGCATTAGTAGCTCTAT+TGG	+	chr3_2:63181776-63181795	None:intergenic	45.0%
!	GAGCTACTAATGCTGGCTAT+TGG	-	chr3_2:63181779-63181798	Msa0416380:intron	45.0%
	GGTCATGCATGAATACCGAT+TGG	-	chr3_2:63181912-63181931	Msa0416380:CDS	45.0%
!	CATGCATGAATACCGATTGG+CGG	-	chr3_2:63181915-63181934	Msa0416380:CDS	45.0%
!	ATGCATGAATACCGATTGGC+GGG	-	chr3_2:63181916-63181935	Msa0416380:CDS	45.0%
	CAACCTATCCACACATGGAA+TGG	-	chr3_2:63181957-63181976	Msa0416380:CDS	45.0%
	GTCGATCCAAACATTCATCG+AGG	-	chr3_2:63182171-63182190	Msa0416380:intron	45.0%
	TGGCTTGAACCAAACCTCAA+TGG	-	chr3_2:63182900-63182919	Msa0416380:intron	45.0%
	TGAACCAAACCTCAATGGTC+GGG	-	chr3_2:63182905-63182924	Msa0416380:intron	45.0%
	AATTCCCGACCATTGAGGTT+TGG	+	chr3_2:63182912-63182931	None:intergenic	45.0%
	ATCACTGTTGAGGATGCAGT+TGG	-	chr3_2:63182960-63182979	Msa0416380:intron	45.0%
!!	GTTTAGGCTTTGGTTTGAGG+TGG	+	chr3_2:63183004-63183023	None:intergenic	45.0%
	GCATGTTTCAAAGGTGGTCT+GGG	-	chr3_2:63183085-63183104	Msa0416380:CDS	45.0%
	GGAGAGAATCGATAACCAGC+CGG	+	chr3_2:63180711-63180730	None:intergenic	50.0%
	TGTGAACCATGGGATTTGCC+AGG	-	chr3_2:63180825-63180844	Msa0416380:CDS	50.0%
	ACCCTCATTGGTAGATCTGG+TGG	-	chr3_2:63181375-63181394	Msa0416380:intron	50.0%
!	AAGTGGTGACGACTAGGGTT+TGG	-	chr3_2:63181409-63181428	Msa0416380:intron	50.0%
	CTAGGGTTTGGCAAGGAGAA+AGG	-	chr3_2:63181421-63181440	Msa0416380:intron	50.0%
	TTGGCAAGGAGAAAGGCCAA+TGG	-	chr3_2:63181428-63181447	Msa0416380:intron	50.0%
	GCGGTTACCTTATGTGTCAG+TGG	+	chr3_2:63181526-63181545	None:intergenic	50.0%
	CTATTGGTCCTTTGGCCAGT+TGG	+	chr3_2:63181760-63181779	None:intergenic	50.0%
	GCTGGCTATTGGAAAGCAAC+AGG	-	chr3_2:63181790-63181809	Msa0416380:intron	50.0%
	AGAGTGTGTTACCCGCCAAT+CGG	+	chr3_2:63181930-63181949	None:intergenic	50.0%
	GAGCACAACCTATCCACACA+TGG	-	chr3_2:63181952-63181971	Msa0416380:CDS	50.0%
	TGACGAATTCCCGACCATTG+AGG	+	chr3_2:63182917-63182936	None:intergenic	50.0%
	GGCATGTTTCAAAGGTGGTC+TGG	-	chr3_2:63183084-63183103	Msa0416380:CDS	50.0%
	GTCATCAGCTTCAGGACATG+TGG	-	chr3_2:63183119-63183138	Msa0416380:CDS	50.0%
	GTGACGACTAGGGTTTGGCA+AGG	-	chr3_2:63181414-63181433	Msa0416380:intron	55.0%
!!	TACAAAGGAAGAGCGCCGAG+TGG	-	chr3_2:63181874-63181893	Msa0416380:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_2	gene	63180651	63183167	63180651	ID=Msa0416380;Name=Msa0416380
chr3_2	mRNA	63180651	63183167	63180651	ID=Msa0416380-mRNA-1;Parent=Msa0416380;Name=Msa0416380-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0\|0\|0\|1\|1\|1\|3\|0\|354
chr3_2	exon	63182972	63183167	63182972	ID=Msa0416380-mRNA-1:exon:13691;Parent=Msa0416380-mRNA-1
chr3_2	exon	63181840	63182120	63181840	ID=Msa0416380-mRNA-1:exon:13690;Parent=Msa0416380-mRNA-1
chr3_2	exon	63180651	63181238	63180651	ID=Msa0416380-mRNA-1:exon:13689;Parent=Msa0416380-mRNA-1
chr3_2	CDS	63182972	63183167	63182972	ID=Msa0416380-mRNA-1:cds;Parent=Msa0416380-mRNA-1
chr3_2	CDS	63181840	63182120	63181840	ID=Msa0416380-mRNA-1:cds;Parent=Msa0416380-mRNA-1
chr3_2	CDS	63180651	63181238	63180651	ID=Msa0416380-mRNA-1:cds;Parent=Msa0416380-mRNA-1

Gene Sequence

>Msa0416380

ATGGGATCAAATGAGAATGTTTACAATCAAAAAATGGAAAATGAAAAGGTCAAATTTCCGGCTGGTTATCGATTCTCTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAATTTCTGTGCTATAGATATTGCTGAAGTCGATATGAATAAGTGTGAACCATGGGATTTGCCAGAGCTGGCTAAAATGGGAGAAACAAAATGGTATTTTTTCTGTGTGAGGGAGAGAAAATACCCAACTGGCCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTTCAAGGGAAATGCATTAATTGGGATGAAAAAAACATTGGTTTTCTACAAAGGAAGAGCGCCGAGTGGTGAAAAAACCAATTGGGTCATGCATGAATACCGATTGGCGGGTAACACACTCTATGAGCACAACCTATCCACACATGGAATGAGTGAATGGGTTCTCAGTAGAGTCTTTAAGAAGGATAATTGTGGAAAGAAAATGGATGGTTCAAAACATGGAAGGTTTAACTCCTCTAGAGAAGGACCATCAAATACTAATGAATCTCTATTGCCTCCATACAATAGTGAAAACCAAACCACTCTTTCTGATTTCTCTCATGTGTTCAATTCATTCTCCAATCCAAATCAAACAGAGAAACCAAAAACACAAGATGACAACATTGTTCATAACAATGAAACTAGTATCTTGAACATTTCATCCTCTTCAAAACAAAATGATGTTTATCCTTTAGCTGAAGTAATAACTGCTGGCTTGAACCAAACCTCAATGGTCGGGAATTCGTCAAACTTTTTCTTCTCTCAAGAACAATCACTGTTGAGGATGCAGTTGGAGAATGAGAATCTTGGAACCACCTCAAACCAAAGCCTAAACCAAGAGTTTTCTTTTGGGAGAGACACTGATGCTGATATCTCATCTGTGGTATATGGAAATGGCATGTTTCAAAGGTGGTCTGGGAATCAAGAATTGTCATCAGCTTCAGGACATGTGGTCAATGATAGCTTGTGGAATTTCTGA

Protein sequence

>Msa0416380

MGSNENVYNQKMENEKVKFPAGYRFSPTDEELINQYLVKKVDDNNFCAIDIAEVDMNKCEPWDLPELAKMGETKWYFFCVRERKYPTGQRTNRATNAGYWKATGKDKEIFKGNALIGMKKTLVFYKGRAPSGEKTNWVMHEYRLAGNTLYEHNLSTHGMSEWVLSRVFKKDNCGKKMDGSKHGRFNSSREGPSNTNESLLPPYNSENQTTLSDFSHVFNSFSNPNQTEKPKTQDDNIVHNNETSILNISSSSKQNDVYPLAEVITAGLNQTSMVGNSSNFFFSQEQSLLRMQLENENLGTTSNQSLNQEFSFGRDTDADISSVVYGNGMFQRWSGNQELSSASGHVVNDSLWNF*