Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684650 | XP_003606745.2 | 97.521 | 847 | 21 | 0 | 1 | 847 | 1 | 847 | 0.0 | 1724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684650 | G7JCI1 | 97.521 | 847 | 21 | 0 | 1 | 847 | 1 | 847 | 0.0 | 1724 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005190 | Msa0684650 | 0.801287 | 9.667667e-49 | -8.615850e-47 |
| Msa0014970 | Msa0684650 | 0.802384 | 5.756162e-49 | -8.615850e-47 |
| Msa0027030 | Msa0684650 | 0.823902 | 1.078784e-53 | -8.615850e-47 |
| Msa0036990 | Msa0684650 | 0.820449 | 6.819961e-53 | -8.615850e-47 |
| Msa0087130 | Msa0684650 | 0.804066 | 2.581569e-49 | -8.615850e-47 |
| Msa0091470 | Msa0684650 | 0.801103 | 1.054498e-48 | -8.615850e-47 |
| Msa0098750 | Msa0684650 | 0.805785 | 1.128566e-49 | -8.615850e-47 |
| Msa0608780 | Msa0684650 | 0.801807 | 7.564697e-49 | -8.615850e-47 |
| Msa0608940 | Msa0684650 | 0.811263 | 7.641565e-51 | -8.615850e-47 |
| Msa0615430 | Msa0684650 | 0.813328 | 2.705614e-51 | -8.615850e-47 |
| Msa0649250 | Msa0684650 | 0.812706 | 3.704065e-51 | -8.615850e-47 |
| Msa0654880 | Msa0684650 | 0.815255 | 1.015106e-51 | -8.615850e-47 |
| Msa0658280 | Msa0684650 | 0.825961 | 3.523217e-54 | -8.615850e-47 |
| Msa0684650 | Msa0691740 | 0.802506 | 5.432423e-49 | -8.615850e-47 |
| Msa0684650 | Msa0695800 | 0.801113 | 1.049507e-48 | -8.615850e-47 |
| Msa0684650 | Msa0698480 | 0.819964 | 8.805594e-53 | -8.615850e-47 |
| Msa0684650 | Msa0698650 | 0.810597 | 1.065240e-50 | -8.615850e-47 |
| Msa0684650 | Msa0701460 | 0.802603 | 5.187973e-49 | -8.615850e-47 |
| Msa0684650 | Msa0702360 | 0.820809 | 5.638328e-53 | -8.615850e-47 |
| Msa0684650 | Msa0702560 | 0.815611 | 8.459866e-52 | -8.615850e-47 |
| Msa0684650 | Msa0712670 | 0.800785 | 1.224275e-48 | -8.615850e-47 |
| Msa0684650 | Msa0730250 | 0.807166 | 5.773343e-50 | -8.615850e-47 |
| Msa0684650 | Msa0770540 | 0.823739 | 1.177676e-53 | -8.615850e-47 |
| Msa0684650 | Msa0817880 | 0.809553 | 1.787902e-50 | -8.615850e-47 |
| Msa0684650 | Msa0876270 | 0.837195 | 5.998206e-57 | -8.615850e-47 |
| Msa0684650 | Msa0880310 | 0.806826 | 6.812705e-50 | -8.615850e-47 |
| Msa0684650 | Msa0912110 | 0.811323 | 7.413926e-51 | -8.615850e-47 |
| Msa0684650 | Msa0938370 | 0.804517 | 2.079511e-49 | -8.615850e-47 |
| Msa0684650 | Msa0967900 | 0.814199 | 1.739954e-51 | -8.615850e-47 |
| Msa0684650 | Msa0975440 | 0.816959 | 4.225888e-52 | -8.615850e-47 |
| Msa0684650 | Msa1078590 | 0.804255 | 2.358135e-49 | -8.615850e-47 |
| Msa0684650 | Msa1078600 | 0.804831 | 1.788644e-49 | -8.615850e-47 |
| Msa0684650 | Msa1078760 | 0.804352 | 2.250973e-49 | -8.615850e-47 |
| Msa0684650 | Msa1078770 | 0.806943 | 6.434305e-50 | -8.615850e-47 |
| Msa0684650 | Msa1101300 | 0.804014 | 2.647601e-49 | -8.615850e-47 |
| Msa0684650 | Msa1143860 | 0.855022 | 8.337505e-62 | -8.615850e-47 |
| Msa0684650 | Msa1150130 | 0.801323 | 9.504912e-49 | -8.615850e-47 |
| Msa0684650 | Msa1169600 | 0.813117 | 3.011026e-51 | -8.615850e-47 |
| Msa0684650 | Msa1176830 | 0.805342 | 1.398104e-49 | -8.615850e-47 |
| Msa0684650 | Msa1191960 | 0.825587 | 4.320827e-54 | -8.615850e-47 |
| Msa0684650 | Msa1202710 | 0.804783 | 1.830294e-49 | -8.615850e-47 |
| Msa0684650 | Msa1205270 | 0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa0684650 | Msa1224820 | 0.820339 | 7.226772e-53 | -8.615850e-47 |
| Msa0684650 | Msa1225140 | 0.853899 | 1.761359e-61 | -8.615850e-47 |
| Msa0684650 | Msa1286950 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0684650 | Msa1296270 | 0.821534 | 3.837241e-53 | -8.615850e-47 |
| Msa0684650 | Msa1297220 | 0.826390 | 2.784915e-54 | -8.615850e-47 |
| Msa0684650 | Msa1320550 | 0.801977 | 6.980785e-49 | -8.615850e-47 |
| Msa0684650 | Msa1323260 | 0.810299 | 1.234877e-50 | -8.615850e-47 |
| Msa0684650 | Msa1330910 | 0.805274 | 1.444732e-49 | -8.615850e-47 |
| Msa0684650 | Msa1332690 | 0.810961 | 8.885960e-51 | -8.615850e-47 |
| Msa0684650 | Msa1343450 | 0.832573 | 8.752712e-56 | -8.615850e-47 |
| Msa0684650 | Msa1346220 | 0.849232 | 3.691061e-60 | -8.615850e-47 |
| Msa0684650 | Msa1346340 | 0.865678 | 4.962334e-65 | -8.615850e-47 |
| Msa0684650 | Msa1349640 | 0.820089 | 8.247769e-53 | -8.615850e-47 |
| Msa0684650 | Msa1350580 | 0.819812 | 9.543544e-53 | -8.615850e-47 |
| Msa0684650 | Msa1368150 | 0.821833 | 3.271941e-53 | -8.615850e-47 |
| Msa0684650 | Msa1376010 | 0.855020 | 8.348886e-62 | -8.615850e-47 |
| Msa0684650 | Msa1382100 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0684650 | Msa1382750 | 0.814957 | 1.182461e-51 | -8.615850e-47 |
| Msa0684650 | Msa1393550 | 0.804216 | 2.402972e-49 | -8.615850e-47 |
| Msa0684650 | Msa1413360 | 0.835698 | 1.442320e-56 | -8.615850e-47 |
| Msa0684650 | Msa1414000 | 0.828976 | 6.664532e-55 | -8.615850e-47 |
| Msa0684650 | Msa1414780 | 0.813593 | 2.366583e-51 | -8.615850e-47 |
| Msa0684650 | Msa1418780 | 0.825572 | 4.358280e-54 | -8.615850e-47 |
| Msa0684650 | Msa1418840 | 0.852237 | 5.267859e-61 | -8.615850e-47 |
| Msa0684650 | Msa1426310 | 0.803405 | 3.541608e-49 | -8.615850e-47 |
| Msa0684650 | Msa1430630 | 0.814759 | 1.307920e-51 | -8.615850e-47 |
| Msa0684650 | Msa1436660 | 0.853905 | 1.754290e-61 | -8.615850e-47 |
| Msa0684650 | Msa1453180 | 0.804459 | 2.138208e-49 | -8.615850e-47 |
| Msa0684650 | Msa1456620 | 0.832067 | 1.168134e-55 | -8.615850e-47 |
| Msa0128110 | Msa0684650 | 0.805969 | 1.032470e-49 | -8.615850e-47 |
| Msa0135470 | Msa0684650 | 0.812078 | 5.081080e-51 | -8.615850e-47 |
| Msa0154720 | Msa0684650 | 0.800474 | 1.417116e-48 | -8.615850e-47 |
| Msa0167150 | Msa0684650 | 0.828910 | 6.913326e-55 | -8.615850e-47 |
| Msa0208710 | Msa0684650 | 0.858472 | 8.046364e-63 | -8.615850e-47 |
| Msa0209370 | Msa0684650 | 0.809190 | 2.138579e-50 | -8.615850e-47 |
| Msa0225070 | Msa0684650 | 0.805871 | 1.082757e-49 | -8.615850e-47 |
| Msa0238540 | Msa0684650 | 0.807312 | 5.375561e-50 | -8.615850e-47 |
| Msa0375570 | Msa0684650 | 0.801489 | 8.788959e-49 | -8.615850e-47 |
| Msa0379950 | Msa0684650 | 0.800389 | 1.474792e-48 | -8.615850e-47 |
| Msa0389890 | Msa0684650 | 0.807769 | 4.299237e-50 | -8.615850e-47 |
| Msa0400900 | Msa0684650 | 0.824501 | 7.800782e-54 | -8.615850e-47 |
| Msa0404880 | Msa0684650 | 0.809871 | 1.527305e-50 | -8.615850e-47 |
| Msa0419040 | Msa0684650 | 0.814697 | 1.349948e-51 | -8.615850e-47 |
| Msa0424220 | Msa0684650 | 0.800428 | 1.448167e-48 | -8.615850e-47 |
| Msa0450230 | Msa0684650 | 0.802120 | 6.523939e-49 | -8.615850e-47 |
| Msa0450890 | Msa0684650 | 0.813297 | 2.748561e-51 | -8.615850e-47 |
| Msa0467710 | Msa0684650 | 0.809425 | 1.904105e-50 | -8.615850e-47 |
| Msa0306160 | Msa0684650 | 0.829828 | 4.136350e-55 | -8.615850e-47 |
| Msa0488900 | Msa0684650 | 0.807115 | 5.917297e-50 | -8.615850e-47 |
| Msa0525180 | Msa0684650 | 0.801071 | 1.070165e-48 | -8.615850e-47 |
| Msa0555510 | Msa0684650 | 0.805362 | 1.384576e-49 | -8.615850e-47 |
| Msa0561420 | Msa0684650 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa0598470 | Msa0684650 | 0.825661 | 4.150964e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684650 | MtrunA17_Chr4g0032781 | 97.521 | 847 | 21 | 0 | 1 | 847 | 1 | 847 | 0.0 | 1724 |
| Msa0684650 | MtrunA17_Chr4g0032831 | 85.461 | 846 | 121 | 1 | 1 | 846 | 1 | 844 | 0.0 | 1510 |
| Msa0684650 | MtrunA17_Chr4g0032821 | 78.580 | 859 | 168 | 3 | 5 | 847 | 4 | 862 | 0.0 | 1409 |
| Msa0684650 | MtrunA17_Chr4g0032881 | 81.443 | 97 | 18 | 0 | 750 | 846 | 23 | 119 | 1.82e-49 | 170 |
| Msa0684650 | MtrunA17_Chr4g0032871 | 76.596 | 47 | 11 | 0 | 191 | 237 | 1 | 47 | 2.32e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684650 | AT5G12950.1 | 64.218 | 844 | 275 | 12 | 22 | 846 | 25 | 860 | 0.0 | 1092 |
| Msa0684650 | AT5G12960.1 | 61.182 | 863 | 308 | 11 | 3 | 847 | 12 | 865 | 0.0 | 1065 |
Find 229 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATCCATTTAACACTTTC+TGG | 0.113218 | 4_4:+48137203 | Msa0684650:CDS |
| GGAAATCGGATCATTCTTTA+TGG | 0.145770 | 4_4:+48136555 | Msa0684650:intron |
| TGTGTTTATGTTTATGTTTA+TGG | 0.156872 | 4_4:+48133803 | Msa0684650:CDS |
| ATCCTTAGTCCTTACATTAT+TGG | 0.158835 | 4_4:+48133335 | Msa0684650:five_prime_UTR |
| GTATAGGAAAATTAAGAATT+TGG | 0.186644 | 4_4:+48134043 | Msa0684650:CDS |
| CTGTTAACTTTACTCAATTA+AGG | 0.194807 | 4_4:+48133490 | Msa0684650:five_prime_UTR |
| ACATATCAAGCTCATTTAAT+TGG | 0.209264 | 4_4:+48137472 | Msa0684650:CDS |
| ATATGCTTCCTTTAGGTATT+GGG | 0.214681 | 4_4:+48137149 | Msa0684650:CDS |
| TTAGTTGAGATATAAATTTC+TGG | 0.239409 | 4_4:+48133613 | Msa0684650:five_prime_UTR |
| TAAACTTTAAGAGATTAATT+TGG | 0.240869 | 4_4:-48133547 | None:intergenic |
| CTGGTCACACCACTGGAAAT+TGG | 0.256230 | 4_4:+48138268 | Msa0684650:CDS |
| AGGTTGTCTGCTATTCTCTT+TGG | 0.268031 | 4_4:-48136806 | None:intergenic |
| TTGAAAATATTCAACCTGTT+TGG | 0.271856 | 4_4:+48135203 | Msa0684650:CDS |
| ACCTTTAGACTTATCCTAAA+AGG | 0.276556 | 4_4:+48138477 | Msa0684650:CDS |
| TGAAAATATTCAACCTGTTT+GGG | 0.277164 | 4_4:+48135204 | Msa0684650:CDS |
| TAGAGCCATTATTCAACTTC+AGG | 0.283414 | 4_4:+48138856 | Msa0684650:CDS |
| AGCTCATTTAATTGGAAATC+AGG | 0.285480 | 4_4:+48137480 | Msa0684650:CDS |
| TCGTTTCCGGGAAAGGATTA+AGG | 0.286337 | 4_4:+48138781 | Msa0684650:CDS |
| CAAGCAGCAAGTTTCGTTTC+CGG | 0.293184 | 4_4:+48138768 | Msa0684650:CDS |
| TAAGAGGTTGGTCTGGTTCT+TGG | 0.293356 | 4_4:-48138560 | None:intergenic |
| TGTCCTCTGAGTTCGGTATT+AGG | 0.297824 | 4_4:-48134266 | None:intergenic |
| TATATGCTTCCTTTAGGTAT+TGG | 0.298978 | 4_4:+48137148 | Msa0684650:CDS |
| ATGATTTATATGCTTCCTTT+AGG | 0.300957 | 4_4:+48137142 | Msa0684650:CDS |
| CAGCACCAGAAAGTGTTAAA+TGG | 0.305734 | 4_4:-48137208 | None:intergenic |
| TGTTTATTTCAACATTCTAT+TGG | 0.309966 | 4_4:+48138927 | Msa0684650:three_prime_UTR |
| TCCGTTCAAGCTATTCTTTA+CGG | 0.312158 | 4_4:+48138231 | Msa0684650:CDS |
| TCACCGGTGATCCACTTTAT+AGG | 0.313826 | 4_4:+48136231 | Msa0684650:CDS |
| AAGCAGCAAGTTTCGTTTCC+GGG | 0.315271 | 4_4:+48138769 | Msa0684650:CDS |
| TACGGGCCATATCTTCTTGC+TGG | 0.315529 | 4_4:+48138249 | Msa0684650:CDS |
| TACCTTGTGAATGGTGTAAT+AGG | 0.317036 | 4_4:-48135230 | None:intergenic |
| ATAGGTTGATTTGGAGCTTC+AGG | 0.320627 | 4_4:+48134192 | Msa0684650:CDS |
| ATGATTGGGCTTTAATGTAT+AGG | 0.322038 | 4_4:+48134027 | Msa0684650:CDS |
| ATGGCTCTAAAAGAAAATTC+TGG | 0.332053 | 4_4:-48138842 | None:intergenic |
| CTAGAACCAATTGATCTTCC+TGG | 0.333639 | 4_4:+48138522 | Msa0684650:CDS |
| TATAGGAAAATTAAGAATTT+GGG | 0.335217 | 4_4:+48134044 | Msa0684650:CDS |
| AGCTAAAACTGGACATAGTT+GGG | 0.338057 | 4_4:+48137180 | Msa0684650:CDS |
| CCGTTCAAGCTATTCTTTAC+GGG | 0.340431 | 4_4:+48138232 | Msa0684650:CDS |
| ATTTGAGATCCAACAACAAT+TGG | 0.347619 | 4_4:-48136197 | None:intergenic |
| ATCAGAACAGAAGCCATAAA+AGG | 0.349305 | 4_4:+48138100 | Msa0684650:CDS |
| GGACATCAGTCCGTGAATTC+TGG | 0.356626 | 4_4:+48136614 | Msa0684650:CDS |
| TCAAGCACAGAAGACTAATT+TGG | 0.361258 | 4_4:+48134145 | Msa0684650:CDS |
| ATCTGCATAAGTGACTTCTT+TGG | 0.370767 | 4_4:-48137056 | None:intergenic |
| CAGGCTATCATTCTTTGTGC+TGG | 0.370963 | 4_4:-48135080 | None:intergenic |
| AATTGATTTCTGCAGAAAAC+CGG | 0.373682 | 4_4:+48137720 | Msa0684650:intron |
| CTTGGGCAGCTTTGCTTCCA+AGG | 0.376140 | 4_4:+48133979 | Msa0684650:CDS |
| GTATTGCCTTAATCCTTTCC+CGG | 0.380643 | 4_4:-48138787 | None:intergenic |
| CTTCTTTGGTCCATCTGAAC+AGG | 0.382755 | 4_4:-48137042 | None:intergenic |
| CAATCACTGAATGAGGAAAC+TGG | 0.384947 | 4_4:+48135465 | Msa0684650:CDS |
| GCTTGAACGGATGCATATTC+CGG | 0.392537 | 4_4:-48138219 | None:intergenic |
| ACAGTTTATTTCAACATTCA+AGG | 0.392877 | 4_4:+48138891 | Msa0684650:CDS |
| TATAGAGAAGATATAATAGA+AGG | 0.393350 | 4_4:-48133465 | None:intergenic |
| CAGAAGAAAACCAACATGAT+TGG | 0.394758 | 4_4:+48134012 | Msa0684650:CDS |
| AAACCCTCAAGCTCTCAAAA+TGG | 0.394868 | 4_4:+48135368 | Msa0684650:CDS |
| CACCGGTGATCCACTTTATA+GGG | 0.396898 | 4_4:+48136232 | Msa0684650:CDS |
| AAAATGTCGGCTCTTGTTGC+CGG | 0.398839 | 4_4:+48135109 | Msa0684650:CDS |
| TAGATGTTGATAGGTTGATT+TGG | 0.399133 | 4_4:+48134183 | Msa0684650:CDS |
| TGGTGACTTACAATCATTCC+AGG | 0.404014 | 4_4:-48138540 | None:intergenic |
| TGGTCACACCACTGGAAATT+GGG | 0.405884 | 4_4:+48138269 | Msa0684650:CDS |
| TTTAATTCAAGTTTGTTCTC+TGG | 0.406902 | 4_4:+48133669 | Msa0684650:five_prime_UTR |
| TTTAGGATTGCTTGCCGTAC+AGG | 0.408367 | 4_4:+48135777 | Msa0684650:CDS |
| AGATATAATAGAAGGTAGAA+AGG | 0.409773 | 4_4:-48133457 | None:intergenic |
| ACAGATCTTGGCCGGCCTGT+TGG | 0.410146 | 4_4:+48135326 | Msa0684650:intron |
| AACAAAATGTCCTCTGAGTT+CGG | 0.411412 | 4_4:-48134273 | None:intergenic |
| ATCATTCCAGGAAGATCAAT+TGG | 0.412265 | 4_4:-48138528 | None:intergenic |
| AACACTTTCTGGTGCTGCTA+TGG | 0.415637 | 4_4:+48137214 | Msa0684650:CDS |
| TGTTGATGTTAGATGTTGAT+AGG | 0.416075 | 4_4:+48134174 | Msa0684650:CDS |
| TGAACTTTCGTGTACCATCT+TGG | 0.416831 | 4_4:+48137757 | Msa0684650:CDS |
| GCTGGCGGCCGACGCGGTTG+TGG | 0.417715 | 4_4:+48139380 | Msa0684650:three_prime_UTR |
| ACACATATCCCAATTGTTGT+TGG | 0.423041 | 4_4:+48136188 | Msa0684650:CDS |
| CTTCATTCTCTGTTGTTCCA+AGG | 0.424674 | 4_4:-48136826 | None:intergenic |
| AGCGATATGAGCTCTGGTTC+AGG | 0.427962 | 4_4:+48138702 | Msa0684650:CDS |
| AAATGTATTGAGTACCTCAT+TGG | 0.428242 | 4_4:-48137580 | None:intergenic |
| AGTTGGCTATTGTAACTAGA+TGG | 0.431586 | 4_4:-48138342 | None:intergenic |
| TAGTTGAGATATAAATTTCT+GGG | 0.431783 | 4_4:+48133614 | Msa0684650:five_prime_UTR |
| CCTTTAGCCACAAAACTGAT+AGG | 0.432441 | 4_4:-48138813 | None:intergenic |
| AAGCTAAAACTGGACATAGT+TGG | 0.435141 | 4_4:+48137179 | Msa0684650:CDS |
| GTGTAATAGGGAGCCCAAAC+AGG | 0.437125 | 4_4:-48135217 | None:intergenic |
| TTCTGGTGCTGCTATGGAAC+AGG | 0.438055 | 4_4:+48137220 | Msa0684650:CDS |
| TTGGATCAATATACTGTAGC+TGG | 0.439839 | 4_4:+48135345 | Msa0684650:CDS |
| TGCAAGTCTGATTCTGAAGC+TGG | 0.441014 | 4_4:+48138738 | Msa0684650:CDS |
| ACCTTGTGAATGGTGTAATA+GGG | 0.442206 | 4_4:-48135229 | None:intergenic |
| AATTGAATCATTCTCAAAGC+TGG | 0.442887 | 4_4:+48137392 | Msa0684650:CDS |
| GATATAATAGAAGGTAGAAA+GGG | 0.444373 | 4_4:-48133456 | None:intergenic |
| CTATTGTAACTAGATGGAAT+TGG | 0.448725 | 4_4:-48138336 | None:intergenic |
| GGGGTTTCGAAAGCTAAAAC+TGG | 0.448832 | 4_4:+48137169 | Msa0684650:CDS |
| GTGTGACCAGCAAGAAGATA+TGG | 0.450346 | 4_4:-48138255 | None:intergenic |
| GGGGATGTGAGGTTGCTTGA+AGG | 0.459919 | 4_4:+48134110 | Msa0684650:CDS |
| GTAAATGTCACTCGAAGGTA+AGG | 0.459985 | 4_4:-48137549 | None:intergenic |
| AAAAGCATGGCTTGTCGAAA+AGG | 0.460007 | 4_4:-48135756 | None:intergenic |
| CATCCTCCATACGGTGTACC+AGG | 0.461140 | 4_4:-48134236 | None:intergenic |
| TTGTAGATTCATCCCGTGGC+GGG | 0.462575 | 4_4:+48138586 | Msa0684650:CDS |
| AGAAGAAAACCAACATGATT+GGG | 0.463290 | 4_4:+48134013 | Msa0684650:CDS |
| TCATCCCTGAAGTTGAATAA+TGG | 0.464760 | 4_4:-48138861 | None:intergenic |
| CGGAAACGAAACTTGCTGCT+TGG | 0.466133 | 4_4:-48138767 | None:intergenic |
| GCAAGTTTCGTTTCCGGGAA+AGG | 0.466962 | 4_4:+48138774 | Msa0684650:CDS |
| CACCGACCGATGAATCTGCT+TGG | 0.469681 | 4_4:+48133961 | Msa0684650:CDS |
| GGTGATGGCCAGGGAGCTGC+TGG | 0.474575 | 4_4:+48139362 | Msa0684650:intron |
| GATGAATCTACAACAATAAG+AGG | 0.474628 | 4_4:-48138576 | None:intergenic |
| ATCCTATGTCTGGTGGTGGC+AGG | 0.474922 | 4_4:+48139429 | Msa0684650:three_prime_UTR |
| TTCTTGACAAGCGGATAGAC+CGG | 0.475274 | 4_4:-48135128 | None:intergenic |
| CGACTCAGTCACATACGTTT+CGG | 0.479974 | 4_4:+48133874 | Msa0684650:CDS |
| TCCGAGTACACCATTCGTTA+AGG | 0.480683 | 4_4:-48137092 | None:intergenic |
| TGAGATATAAATTTCTGGGT+TGG | 0.482620 | 4_4:+48133618 | Msa0684650:five_prime_UTR |
| AAATAACTCACCCTATAAAG+TGG | 0.483711 | 4_4:-48136242 | None:intergenic |
| CTTCTTGCTGGTCACACCAC+TGG | 0.485051 | 4_4:+48138261 | Msa0684650:CDS |
| TTTGAGATCCAACAACAATT+GGG | 0.485544 | 4_4:-48136196 | None:intergenic |
| GCTCATTTAATTGGAAATCA+GGG | 0.488344 | 4_4:+48137481 | Msa0684650:CDS |
| TCTTCTGATAAGATCTTCCT+TGG | 0.488745 | 4_4:-48133996 | None:intergenic |
| GGATTCAAAGCATCTATTGT+TGG | 0.489543 | 4_4:+48135729 | Msa0684650:CDS |
| ACTTTATCTCTGCCAGCTCC+AGG | 0.490326 | 4_4:+48137819 | Msa0684650:CDS |
| GGTGATCGCTATCCTATGTC+TGG | 0.491309 | 4_4:+48139419 | Msa0684650:three_prime_UTR |
| GCTTCTGTTCTGATGATAAG+AGG | 0.491841 | 4_4:-48138091 | None:intergenic |
| AATTTGGAGGTTCTAATTGA+AGG | 0.492292 | 4_4:-48133531 | None:intergenic |
| TATGCTTCCTTTAGGTATTG+GGG | 0.493468 | 4_4:+48137150 | Msa0684650:CDS |
| AATGTATTGAGTACCTCATT+GGG | 0.498118 | 4_4:-48137579 | None:intergenic |
| ACTTTAAGAGATTAATTTGG+AGG | 0.498751 | 4_4:-48133544 | None:intergenic |
| GATATGTGACCAATAATGTA+AGG | 0.498974 | 4_4:-48133344 | None:intergenic |
| CTACAGTATATTGATCCAAC+AGG | 0.499586 | 4_4:-48135341 | None:intergenic |
| AGAGCCATTATTCAACTTCA+GGG | 0.500947 | 4_4:+48138857 | Msa0684650:CDS |
| GGAAATTGGGACATTAAAAC+CGG | 0.502210 | 4_4:+48138282 | Msa0684650:CDS |
| TAAGGGTCCGATGAAGCTGC+TGG | 0.503041 | 4_4:-48137531 | None:intergenic |
| TTCAGAATTCAATATCGCCT+TGG | 0.504238 | 4_4:-48137796 | None:intergenic |
| TTTCGCGGCACCTGTTCAGA+TGG | 0.505819 | 4_4:+48137032 | Msa0684650:CDS |
| GATAATGATTTCAGGTTTCG+CGG | 0.508807 | 4_4:+48137017 | Msa0684650:intron |
| CACAACTTATAATATGTTGA+AGG | 0.508895 | 4_4:+48136856 | Msa0684650:CDS |
| GTTCAATGTTGATGAAGTCC+CGG | 0.511297 | 4_4:-48137739 | None:intergenic |
| GACCAATAATGTAAGGACTA+AGG | 0.512209 | 4_4:-48133337 | None:intergenic |
| CAACTTTGACAGATCTTGGC+CGG | 0.513374 | 4_4:+48135318 | Msa0684650:intron |
| GGAGCTGCTGGCGGCCGACG+CGG | 0.515178 | 4_4:+48139374 | Msa0684650:three_prime_UTR |
| TAGTCTTCTGTGCTTGAGCA+TGG | 0.515586 | 4_4:-48134139 | None:intergenic |
| ACCGACCGATGAATCTGCTT+GGG | 0.516084 | 4_4:+48133962 | Msa0684650:CDS |
| AGTTGTTCCAGCAGCTTCAT+CGG | 0.516793 | 4_4:+48137524 | Msa0684650:CDS |
| CTGGTACACCGTATGGAGGA+TGG | 0.521019 | 4_4:+48134237 | Msa0684650:CDS |
| AATCTACAACAATAAGAGGT+TGG | 0.521360 | 4_4:-48138572 | None:intergenic |
| TGCAACAGCTTTGTTAGCAC+CGG | 0.526127 | 4_4:-48138301 | None:intergenic |
| TTCTCAAAGAAGTTCCACTT+GGG | 0.526593 | 4_4:+48134090 | Msa0684650:CDS |
| CTGGTTCAGGAGTTAAGCTC+AGG | 0.527444 | 4_4:+48138715 | Msa0684650:CDS |
| AACTGAAGAAGGCCCGCCAC+GGG | 0.529187 | 4_4:-48138598 | None:intergenic |
| ACAACAATAAGAGGTTGGTC+TGG | 0.530198 | 4_4:-48138567 | None:intergenic |
| CTTGTGGTACCGGGATTGGA+TGG | 0.531617 | 4_4:+48138624 | Msa0684650:CDS |
| ATTCAAAGAGGAACAGATCC+TGG | 0.532740 | 4_4:+48137115 | Msa0684650:CDS |
| GTGTATAGCGATATGAGCTC+TGG | 0.536493 | 4_4:+48138696 | Msa0684650:CDS |
| CGCTATCCTATGTCTGGTGG+TGG | 0.536818 | 4_4:+48139425 | Msa0684650:three_prime_UTR |
| GGTGTGTTTAAGCCACCTGT+TGG | 0.539489 | 4_4:+48134065 | Msa0684650:CDS |
| ATTGATTTCTGCAGAAAACC+GGG | 0.540154 | 4_4:+48137721 | Msa0684650:intron |
| ATTGAATCATTCTCAAAGCT+GGG | 0.541879 | 4_4:+48137393 | Msa0684650:CDS |
| ATTGATATGTGTTACCTGTA+CGG | 0.542818 | 4_4:-48135791 | None:intergenic |
| CATCTTAATACCAGAATTCA+CGG | 0.545226 | 4_4:-48136624 | None:intergenic |
| CCGACTCCTGGTACACCGTA+TGG | 0.545762 | 4_4:+48134230 | Msa0684650:CDS |
| GCCTTAACGAATGGTGTACT+CGG | 0.546534 | 4_4:+48137091 | Msa0684650:CDS |
| TGAGTGCATCAGCTCTAATG+TGG | 0.550383 | 4_4:+48135056 | Msa0684650:CDS |
| TGGTACACCGTATGGAGGAT+GGG | 0.551695 | 4_4:+48134238 | Msa0684650:CDS |
| ACATTAAAGCCCAATCATGT+TGG | 0.552104 | 4_4:-48134022 | None:intergenic |
| ACTTCTTTGAGAAATCCAAC+AGG | 0.553641 | 4_4:-48134080 | None:intergenic |
| TTCGAAACCCCAATACCTAA+AGG | 0.555523 | 4_4:-48137157 | None:intergenic |
| GCGACATCAGTACCAGGCTC+AGG | 0.555696 | 4_4:-48138444 | None:intergenic |
| TGGAGCTTCAGGAAGACGGC+TGG | 0.556390 | 4_4:+48134203 | Msa0684650:CDS |
| GATTAATATCATCTCGTGAA+AGG | 0.556843 | 4_4:-48133315 | None:intergenic |
| CCTCTGATGAAAGACGTGTC+TGG | 0.560973 | 4_4:-48133160 | None:intergenic |
| ACACTATCAATCACTGAATG+AGG | 0.561789 | 4_4:+48135458 | Msa0684650:CDS |
| GGTTCCTCCCATCCTCCATA+CGG | 0.561878 | 4_4:-48134245 | None:intergenic |
| ACGGCTGGTTTACCGACTCC+TGG | 0.562227 | 4_4:+48134218 | Msa0684650:CDS |
| GTCACACGACAGTGGAGTGC+CGG | 0.563651 | 4_4:+48138046 | Msa0684650:CDS |
| GATGGCCAGGGAGCTGCTGG+CGG | 0.565152 | 4_4:+48139365 | Msa0684650:intron |
| TGATGATAAGAGGCAACTGA+AGG | 0.565999 | 4_4:-48138081 | None:intergenic |
| AGCTGCCCAAGCAGATTCAT+CGG | 0.572308 | 4_4:-48133967 | None:intergenic |
| CTGAAGGGTCAGCTTGTCAC+CGG | 0.574100 | 4_4:-48138065 | None:intergenic |
| TTTCTCAAAGAAGTTCCACT+TGG | 0.576399 | 4_4:+48134089 | Msa0684650:CDS |
| TCTTCTCACAGCTATGCGAC+TGG | 0.577040 | 4_4:+48136589 | Msa0684650:CDS |
| AACAACTGTCTGAGTGAGCA+AGG | 0.578639 | 4_4:-48137508 | None:intergenic |
| CCCGTAAAGAATAGCTTGAA+CGG | 0.578745 | 4_4:-48138232 | None:intergenic |
| CGTGTACCATCTTGGAGTCG+TGG | 0.579613 | 4_4:+48137765 | Msa0684650:CDS |
| AAGTTCCACTTGGGGATGTG+AGG | 0.581746 | 4_4:+48134099 | Msa0684650:CDS |
| GACAGATTTAGACCTGGAGC+TGG | 0.582342 | 4_4:-48137831 | None:intergenic |
| TAGCCACAAAACTGATAGGA+TGG | 0.582916 | 4_4:-48138809 | None:intergenic |
| TATGAGCGTGCCTTAACGAA+TGG | 0.583068 | 4_4:+48137082 | Msa0684650:CDS |
| AAGAGAATAGCAGACAACCT+TGG | 0.588945 | 4_4:+48136809 | Msa0684650:CDS |
| CACCCTATAAAGTGGATCAC+CGG | 0.591270 | 4_4:-48136234 | None:intergenic |
| GCCCAAGCAGATTCATCGGT+CGG | 0.593496 | 4_4:-48133963 | None:intergenic |
| TGAAGAGCGACATCAGTACC+AGG | 0.595068 | 4_4:-48138450 | None:intergenic |
| CCATCTTGGAGTCGTGGAGA+CGG | 0.595325 | 4_4:+48137771 | Msa0684650:CDS |
| GATTTGGAGCTTCAGGAAGA+CGG | 0.595474 | 4_4:+48134199 | Msa0684650:CDS |
| AAACTGAAGAAGGCCCGCCA+CGG | 0.597043 | 4_4:-48138599 | None:intergenic |
| AAGCTCTCAAAATGGTGACA+TGG | 0.603418 | 4_4:+48135376 | Msa0684650:CDS |
| GAGTCGTGGAGACGGTGCCA+AGG | 0.604790 | 4_4:+48137779 | Msa0684650:CDS |
| GCTAAAACTGGACATAGTTG+GGG | 0.607890 | 4_4:+48137181 | Msa0684650:CDS |
| TTACAAATTATATAGTGTAA+CGG | 0.608043 | 4_4:+48135506 | Msa0684650:CDS |
| GAGTACCTCATTGGGAGAGA+AGG | 0.608798 | 4_4:-48137571 | None:intergenic |
| TCTCAAAGAAGTTCCACTTG+GGG | 0.609452 | 4_4:+48134091 | Msa0684650:CDS |
| CCGTCTCCACGACTCCAAGA+TGG | 0.610098 | 4_4:-48137771 | None:intergenic |
| TCTCAAAATGGTGACATGGA+TGG | 0.613135 | 4_4:+48135380 | Msa0684650:CDS |
| TTTAATGTCCCAATTTCCAG+TGG | 0.613280 | 4_4:-48138277 | None:intergenic |
| TCTCACAGCTATGCGACTGG+AGG | 0.614490 | 4_4:+48136592 | Msa0684650:CDS |
| ATTTACCTTCTCTCCCAATG+AGG | 0.614801 | 4_4:+48137566 | Msa0684650:CDS |
| TTATAATTCAGATGACAGAC+CGG | 0.617292 | 4_4:+48138200 | Msa0684650:intron |
| AGCATATAAATCATCACACC+AGG | 0.618298 | 4_4:-48137133 | None:intergenic |
| TGTGGTCAGCAGCTGTGTGG+TGG | 0.619656 | 4_4:+48139398 | Msa0684650:three_prime_UTR |
| TCTTTGAGAAATCCAACAGG+TGG | 0.620033 | 4_4:-48134077 | None:intergenic |
| AGAAGGTAAATGTCACTCGA+AGG | 0.622101 | 4_4:-48137554 | None:intergenic |
| GTTGTAGATTCATCCCGTGG+CGG | 0.623787 | 4_4:+48138585 | Msa0684650:CDS |
| CTCCTGCCACCACCAGACAT+AGG | 0.626096 | 4_4:-48139431 | None:intergenic |
| ATTGTTGTAGATTCATCCCG+TGG | 0.627674 | 4_4:+48138582 | Msa0684650:CDS |
| ACAAACTTGAATTAAAGTAG+TGG | 0.633877 | 4_4:-48133662 | None:intergenic |
| CACAAAGAATGATAGCCTGA+AGG | 0.636801 | 4_4:+48135084 | Msa0684650:CDS |
| CCAGACACGTCTTTCATCAG+AGG | 0.639396 | 4_4:+48133160 | Msa0684650:five_prime_UTR |
| AGTATATTGATCCAACAGGC+CGG | 0.642469 | 4_4:-48135337 | None:intergenic |
| GGTGTACTCGGAATTCAAAG+AGG | 0.645519 | 4_4:+48137103 | Msa0684650:CDS |
| GAGTGCATCAGCTCTAATGT+GGG | 0.646670 | 4_4:+48135057 | Msa0684650:CDS |
| GATCGCTATCCTATGTCTGG+TGG | 0.647033 | 4_4:+48139422 | Msa0684650:three_prime_UTR |
| TCGATATAACATTCACCACT+CGG | 0.652176 | 4_4:-48135419 | None:intergenic |
| CTCACAGCTATGCGACTGGA+GGG | 0.653289 | 4_4:+48136593 | Msa0684650:CDS |
| GATGATAAGAGGCAACTGAA+GGG | 0.654494 | 4_4:-48138080 | None:intergenic |
| CAAATGCGGTATGAAGTCAC+CGG | 0.655890 | 4_4:+48136215 | Msa0684650:CDS |
| TTGCATCAAAGAATGAGACA+TGG | 0.656551 | 4_4:+48133907 | Msa0684650:CDS |
| CCATACGGTGTACCAGGAGT+CGG | 0.658192 | 4_4:-48134230 | None:intergenic |
| TAAATGTCACTCGAAGGTAA+GGG | 0.659796 | 4_4:-48137548 | None:intergenic |
| GCTGCTGACCACAACCGCGT+CGG | 0.661869 | 4_4:-48139388 | None:intergenic |
| AGCAACCTCACATCCCCAAG+TGG | 0.662619 | 4_4:-48134104 | None:intergenic |
| TACTGAATGATGTATAGACT+AGG | 0.668553 | 4_4:-48137450 | None:intergenic |
| ACTCCTGGTACACCGTATGG+AGG | 0.671069 | 4_4:+48134233 | Msa0684650:CDS |
| TAGCCTGAAGGAGAAAATGT+CGG | 0.674437 | 4_4:+48135096 | Msa0684650:CDS |
| TTGTTGTTGGATCTCAAATG+CGG | 0.677316 | 4_4:+48136201 | Msa0684650:CDS |
| TCCCTATTACACCATTCACA+AGG | 0.687838 | 4_4:+48135228 | Msa0684650:CDS |
| GAACCTAATACCGAACTCAG+AGG | 0.704808 | 4_4:+48134263 | Msa0684650:CDS |
| GGTTGTGGTCAGCAGCTGTG+TGG | 0.713684 | 4_4:+48139395 | Msa0684650:three_prime_UTR |
| CGAAACGTATGTGACTGAGT+CGG | 0.721173 | 4_4:-48133873 | None:intergenic |
| TACACCGTATGGAGGATGGG+AGG | 0.724621 | 4_4:+48134241 | Msa0684650:CDS |
| TTTATGGCACTTATGCTGCG+TGG | 0.732989 | 4_4:+48133819 | Msa0684650:CDS |
| TCACTGAATGAGGAAACTGG+AGG | 0.742577 | 4_4:+48135468 | Msa0684650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAATTTCAAAAATAATTT+TGG | - | chr4_4:48136125-48136144 | None:intergenic | 10.0% |
| !!! | TAAACTTTAAGAGATTAATT+TGG | - | chr4_4:48133550-48133569 | None:intergenic | 15.0% |
| !! | TATAGGAAAATTAAGAATTT+GGG | + | chr4_4:48134044-48134063 | Msa0684650:CDS | 15.0% |
| !! | CATTGTCAAAAAAAAAAAAA+AGG | - | chr4_4:48135022-48135041 | None:intergenic | 15.0% |
| !! | TTACAAATTATATAGTGTAA+CGG | + | chr4_4:48135506-48135525 | Msa0684650:CDS | 15.0% |
| !!! | CTGTTAATTTTTATACTAAA+AGG | - | chr4_4:48135580-48135599 | None:intergenic | 15.0% |
| !!! | ATTGTATTTAATTTTATGAC+TGG | + | chr4_4:48136097-48136116 | Msa0684650:intron | 15.0% |
| !!! | TATGTTTATTTTCTCTTTAT+TGG | + | chr4_4:48136314-48136333 | Msa0684650:intron | 15.0% |
| !! | TTTGTAATTGTAATATTTAG+TGG | + | chr4_4:48136361-48136380 | Msa0684650:intron | 15.0% |
| !!! | TTTTCTTTTTTCATCTTAAA+AGG | + | chr4_4:48136690-48136709 | Msa0684650:intron | 15.0% |
| !!! | ATTTTGTACAGAATTTTTAT+TGG | - | chr4_4:48139172-48139191 | None:intergenic | 15.0% |
| !! | AAAAAATTAATATAGACTCA+TGG | - | chr4_4:48139241-48139260 | None:intergenic | 15.0% |
| !! | TATTTATTAATAATTGGAAG+TGG | + | chr4_4:48139341-48139360 | Msa0684650:intron | 15.0% |
| !! | TATAGAGAAGATATAATAGA+AGG | - | chr4_4:48133468-48133487 | None:intergenic | 20.0% |
| !! | TTAGTTGAGATATAAATTTC+TGG | + | chr4_4:48133613-48133632 | Msa0684650:five_prime_UTR | 20.0% |
| !! | TAGTTGAGATATAAATTTCT+GGG | + | chr4_4:48133614-48133633 | Msa0684650:five_prime_UTR | 20.0% |
| !! | TGTGTTTATGTTTATGTTTA+TGG | + | chr4_4:48133803-48133822 | Msa0684650:CDS | 20.0% |
| !! | GTATAGGAAAATTAAGAATT+TGG | + | chr4_4:48134043-48134062 | Msa0684650:CDS | 20.0% |
| !!! | TTTAGTTTTCTTAGTTGAAA+GGG | + | chr4_4:48134352-48134371 | Msa0684650:intron | 20.0% |
| !! | TATGCAAATAAATGCTAAAA+GGG | - | chr4_4:48134591-48134610 | None:intergenic | 20.0% |
| !! | TTATGCAAATAAATGCTAAA+AGG | - | chr4_4:48134592-48134611 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGACAATGTGA+AGG | + | chr4_4:48135025-48135044 | Msa0684650:intron | 20.0% |
| !!! | TTTTTTTTTGACAATGTGAA+GGG | + | chr4_4:48135026-48135045 | Msa0684650:intron | 20.0% |
| !! | AGTATAAAAATTAACAGACA+TGG | + | chr4_4:48135583-48135602 | Msa0684650:intron | 20.0% |
| !! | CTTATAAAATCCATCAAATA+TGG | - | chr4_4:48135617-48135636 | None:intergenic | 20.0% |
| !! | CAACATTATAAGTAATATTC+TGG | - | chr4_4:48136037-48136056 | None:intergenic | 20.0% |
| !! | TAAAATACTATTTCCTTTGT+AGG | - | chr4_4:48136069-48136088 | None:intergenic | 20.0% |
| !!! | GAAATTTTCTTTTTTCATGT+AGG | + | chr4_4:48136136-48136155 | Msa0684650:intron | 20.0% |
| !! | AAATTGAAAATCATAGCATA+TGG | - | chr4_4:48136503-48136522 | None:intergenic | 20.0% |
| !!! | TAATATTTGTTCTTGTGTTT+TGG | + | chr4_4:48136525-48136544 | Msa0684650:intron | 20.0% |
| !! | ATGAAAAAAGAAAATATCCA+TGG | - | chr4_4:48136684-48136703 | None:intergenic | 20.0% |
| !! | TGATTTACTATTTGATATTC+AGG | + | chr4_4:48136952-48136971 | Msa0684650:intron | 20.0% |
| !! | GATTTACTATTTGATATTCA+GGG | + | chr4_4:48136953-48136972 | Msa0684650:intron | 20.0% |
| !!! | ATATTTGTGTATTTTATAGC+AGG | + | chr4_4:48137958-48137977 | Msa0684650:intron | 20.0% |
| !! | TGTTTATTTCAACATTCTAT+TGG | + | chr4_4:48138927-48138946 | Msa0684650:three_prime_UTR | 20.0% |
| !! | TTTGATTATTTGAACTTTGT+AGG | - | chr4_4:48138982-48139001 | None:intergenic | 20.0% |
| !! | ATTGAAAATATGATAGGATT+TGG | - | chr4_4:48139201-48139220 | None:intergenic | 20.0% |
| !! | TCATCAATTGAAAATATGAT+AGG | - | chr4_4:48139207-48139226 | None:intergenic | 20.0% |
| ! | GATATAATAGAAGGTAGAAA+GGG | - | chr4_4:48133459-48133478 | None:intergenic | 25.0% |
| ! | AGATATAATAGAAGGTAGAA+AGG | - | chr4_4:48133460-48133479 | None:intergenic | 25.0% |
| ! | CTGTTAACTTTACTCAATTA+AGG | + | chr4_4:48133490-48133509 | Msa0684650:five_prime_UTR | 25.0% |
| !! | ACTTTAAGAGATTAATTTGG+AGG | - | chr4_4:48133547-48133566 | None:intergenic | 25.0% |
| ! | ACAAACTTGAATTAAAGTAG+TGG | - | chr4_4:48133665-48133684 | None:intergenic | 25.0% |
| !! | TTTAATTCAAGTTTGTTCTC+TGG | + | chr4_4:48133669-48133688 | Msa0684650:five_prime_UTR | 25.0% |
| ! | GCTTAATGACTTATAGATTA+AGG | + | chr4_4:48133716-48133735 | Msa0684650:intron | 25.0% |
| !! | AATGTTCTTTATTTGTACCA+AGG | + | chr4_4:48134327-48134346 | Msa0684650:intron | 25.0% |
| !!! | CTTTAGTTTTCTTAGTTGAA+AGG | + | chr4_4:48134351-48134370 | Msa0684650:intron | 25.0% |
| ! | CTAAAAGGGTTGTAAATAAA+AGG | - | chr4_4:48134577-48134596 | None:intergenic | 25.0% |
| !! | AACTTTACTTAGTTTGAAGT+TGG | + | chr4_4:48134849-48134868 | Msa0684650:intron | 25.0% |
| ! | AGAGATATTTCAGAAGTTAT+GGG | - | chr4_4:48134875-48134894 | None:intergenic | 25.0% |
| ! | TTGAAAATATTCAACCTGTT+TGG | + | chr4_4:48135203-48135222 | Msa0684650:CDS | 25.0% |
| ! | TGAAAATATTCAACCTGTTT+GGG | + | chr4_4:48135204-48135223 | Msa0684650:CDS | 25.0% |
| !!! | GCATAATCAAAATCTAGTTT+TGG | - | chr4_4:48135259-48135278 | None:intergenic | 25.0% |
| ! | AAATTATATAGTGTAACGGT+AGG | + | chr4_4:48135510-48135529 | Msa0684650:intron | 25.0% |
| !! | CAAAACAATTTAAGACAATG+CGG | - | chr4_4:48135847-48135866 | None:intergenic | 25.0% |
| ! | GATATACAATATATACCAGA+AGG | + | chr4_4:48135935-48135954 | Msa0684650:intron | 25.0% |
| ! | TAAAAGTTGAAGCAGAAATA+AGG | - | chr4_4:48135985-48136004 | None:intergenic | 25.0% |
| ! | ATGTCTGTAAGTATGAATAT+GGG | - | chr4_4:48136417-48136436 | None:intergenic | 25.0% |
| ! | AATGTCTGTAAGTATGAATA+TGG | - | chr4_4:48136418-48136437 | None:intergenic | 25.0% |
| ! | TATTCATACTTACAGACATT+CGG | + | chr4_4:48136418-48136437 | Msa0684650:intron | 25.0% |
| ! | TAAACTGAAACTTAAAATGC+TGG | - | chr4_4:48136650-48136669 | None:intergenic | 25.0% |
| !!! | TTCCTCTATTTTTAGATACT+CGG | + | chr4_4:48136733-48136752 | Msa0684650:intron | 25.0% |
| ! | CACAACTTATAATATGTTGA+AGG | + | chr4_4:48136856-48136875 | Msa0684650:CDS | 25.0% |
| ! | ATGATTTATATGCTTCCTTT+AGG | + | chr4_4:48137142-48137161 | Msa0684650:CDS | 25.0% |
| !!! | AGATTCTATCTATTTTGAAG+AGG | + | chr4_4:48137416-48137435 | Msa0684650:CDS | 25.0% |
| ! | ACATATCAAGCTCATTTAAT+TGG | + | chr4_4:48137472-48137491 | Msa0684650:CDS | 25.0% |
| !! | GTACTCAATACATTTTCTTT+TGG | + | chr4_4:48137588-48137607 | Msa0684650:intron | 25.0% |
| ! | TTGAAAAAGAACAAACTCTT+GGG | + | chr4_4:48137881-48137900 | Msa0684650:intron | 25.0% |
| ! | TGAAAACACAATATCAGTAA+GGG | - | chr4_4:48138178-48138197 | None:intergenic | 25.0% |
| ! | TTGAAAACACAATATCAGTA+AGG | - | chr4_4:48138179-48138198 | None:intergenic | 25.0% |
| ! | ACAGTTTATTTCAACATTCA+AGG | + | chr4_4:48138891-48138910 | Msa0684650:CDS | 25.0% |
| ! | AAGTGCTCTAATCAAATTTA+GGG | + | chr4_4:48139067-48139086 | Msa0684650:intron | 25.0% |
| !!! | TGTAAGTGAATTGTTTTGAT+TGG | - | chr4_4:48139140-48139159 | None:intergenic | 25.0% |
| ! | TTAATATAGACTCATGGATT+TGG | - | chr4_4:48139235-48139254 | None:intergenic | 25.0% |
| GATTAATATCATCTCGTGAA+AGG | - | chr4_4:48133318-48133337 | None:intergenic | 30.0% | |
| ATCCTTAGTCCTTACATTAT+TGG | + | chr4_4:48133335-48133354 | Msa0684650:five_prime_UTR | 30.0% | |
| GATATGTGACCAATAATGTA+AGG | - | chr4_4:48133347-48133366 | None:intergenic | 30.0% | |
| ! | AATTTGGAGGTTCTAATTGA+AGG | - | chr4_4:48133534-48133553 | None:intergenic | 30.0% |
| ! | TGAGATATAAATTTCTGGGT+TGG | + | chr4_4:48133618-48133637 | Msa0684650:five_prime_UTR | 30.0% |
| ! | TGAACTTTTCAGAAAGATGA+AGG | + | chr4_4:48133776-48133795 | Msa0684650:intron | 30.0% |
| AGAAGAAAACCAACATGATT+GGG | + | chr4_4:48134013-48134032 | Msa0684650:CDS | 30.0% | |
| ! | ATGATTGGGCTTTAATGTAT+AGG | + | chr4_4:48134027-48134046 | Msa0684650:CDS | 30.0% |
| TGTTGATGTTAGATGTTGAT+AGG | + | chr4_4:48134174-48134193 | Msa0684650:CDS | 30.0% | |
| !! | TAGATGTTGATAGGTTGATT+TGG | + | chr4_4:48134183-48134202 | Msa0684650:CDS | 30.0% |
| ACTAAGAAAACTAAAGACCT+TGG | - | chr4_4:48134347-48134366 | None:intergenic | 30.0% | |
| AAAGAATCGCAGTAAAATAC+AGG | + | chr4_4:48134477-48134496 | Msa0684650:intron | 30.0% | |
| ATACAACACAACAATGATTG+AGG | - | chr4_4:48134503-48134522 | None:intergenic | 30.0% | |
| AAGGGTTGTAAATAAAAGGT+TGG | - | chr4_4:48134573-48134592 | None:intergenic | 30.0% | |
| CTAGTTACTACACATAAAAG+TGG | - | chr4_4:48134640-48134659 | None:intergenic | 30.0% | |
| GAGAGATATTTCAGAAGTTA+TGG | - | chr4_4:48134876-48134895 | None:intergenic | 30.0% | |
| !!! | TCCAATTTTTTCTTGACAAG+CGG | - | chr4_4:48135140-48135159 | None:intergenic | 30.0% |
| TGTCAAGAAAAAATTGGAAC+AGG | + | chr4_4:48135142-48135161 | Msa0684650:CDS | 30.0% | |
| TCAAATCGATCAAAAAACTC+TGG | - | chr4_4:48135187-48135206 | None:intergenic | 30.0% | |
| !! | TTTTGGTTATACCTTGTGAA+TGG | - | chr4_4:48135242-48135261 | None:intergenic | 30.0% |
| ! | TTTGATTATGCAAGTGCTTT+TGG | + | chr4_4:48135268-48135287 | Msa0684650:intron | 30.0% |
| ATTGAGATCACACAGTAATA+AGG | - | chr4_4:48135294-48135313 | None:intergenic | 30.0% | |
| TATTCAACTTTGACAGATCT+TGG | + | chr4_4:48135314-48135333 | Msa0684650:intron | 30.0% | |
| TCATGAATGATGTTATTCAC+CGG | + | chr4_4:48135542-48135561 | Msa0684650:intron | 30.0% | |
| TAAAAGGAAACATATCCAAC+CGG | - | chr4_4:48135564-48135583 | None:intergenic | 30.0% | |
| GGATTCTAATCCATATTTGA+TGG | + | chr4_4:48135604-48135623 | Msa0684650:intron | 30.0% | |
| CATTCAAAGCTAGCATATTA+TGG | + | chr4_4:48135642-48135661 | Msa0684650:intron | 30.0% | |
| TGTAAATTACAGCGATAACT+AGG | - | chr4_4:48135670-48135689 | None:intergenic | 30.0% | |
| ACCAAGACAGATTTACATTA+GGG | - | chr4_4:48135694-48135713 | None:intergenic | 30.0% | |
| TACCAAGACAGATTTACATT+AGG | - | chr4_4:48135695-48135714 | None:intergenic | 30.0% | |
| ATTGATATGTGTTACCTGTA+CGG | - | chr4_4:48135794-48135813 | None:intergenic | 30.0% | |
| ! | CGCATTGTCTTAAATTGTTT+TGG | + | chr4_4:48135845-48135864 | Msa0684650:intron | 30.0% |
| ! | TTTGAGATCCAACAACAATT+GGG | - | chr4_4:48136199-48136218 | None:intergenic | 30.0% |
| ! | ATTTGAGATCCAACAACAAT+TGG | - | chr4_4:48136200-48136219 | None:intergenic | 30.0% |
| AAATAACTCACCCTATAAAG+TGG | - | chr4_4:48136245-48136264 | None:intergenic | 30.0% | |
| CATCTTAATACCAGAATTCA+CGG | - | chr4_4:48136627-48136646 | None:intergenic | 30.0% | |
| AGTTTACATTCAAGTATCCA+TGG | + | chr4_4:48136664-48136683 | Msa0684650:intron | 30.0% | |
| AACCGAGTATCTAAAAATAG+AGG | - | chr4_4:48136738-48136757 | None:intergenic | 30.0% | |
| TTAGTTCATCATGTAATCCA+AGG | + | chr4_4:48136903-48136922 | Msa0684650:intron | 30.0% | |
| TAGTTCATCATGTAATCCAA+GGG | + | chr4_4:48136904-48136923 | Msa0684650:intron | 30.0% | |
| TGTTGCAAGATAATGATTTC+AGG | + | chr4_4:48137009-48137028 | Msa0684650:intron | 30.0% | |
| TATATGCTTCCTTTAGGTAT+TGG | + | chr4_4:48137148-48137167 | Msa0684650:CDS | 30.0% | |
| ATATGCTTCCTTTAGGTATT+GGG | + | chr4_4:48137149-48137168 | Msa0684650:CDS | 30.0% | |
| GAAATCCATTTAACACTTTC+TGG | + | chr4_4:48137203-48137222 | Msa0684650:CDS | 30.0% | |
| !! | AACAGGTAGGTATTTGTTTT+AGG | + | chr4_4:48137237-48137256 | Msa0684650:intron | 30.0% |
| CAGGTGTACATAATCTTAAA+TGG | - | chr4_4:48137298-48137317 | None:intergenic | 30.0% | |
| ! | CATTTAAGATTATGTACACC+TGG | + | chr4_4:48137296-48137315 | Msa0684650:intron | 30.0% |
| GATTCAATTCCTAATGACAA+AGG | - | chr4_4:48137381-48137400 | None:intergenic | 30.0% | |
| AATTGAATCATTCTCAAAGC+TGG | + | chr4_4:48137392-48137411 | Msa0684650:CDS | 30.0% | |
| ATTGAATCATTCTCAAAGCT+GGG | + | chr4_4:48137393-48137412 | Msa0684650:CDS | 30.0% | |
| !! | TCTATCTATTTTGAAGAGGA+AGG | + | chr4_4:48137420-48137439 | Msa0684650:CDS | 30.0% |
| !! | CTATCTATTTTGAAGAGGAA+GGG | + | chr4_4:48137421-48137440 | Msa0684650:CDS | 30.0% |
| TACTGAATGATGTATAGACT+AGG | - | chr4_4:48137453-48137472 | None:intergenic | 30.0% | |
| AGCTCATTTAATTGGAAATC+AGG | + | chr4_4:48137480-48137499 | Msa0684650:CDS | 30.0% | |
| GCTCATTTAATTGGAAATCA+GGG | + | chr4_4:48137481-48137500 | Msa0684650:CDS | 30.0% | |
| AATGTATTGAGTACCTCATT+GGG | - | chr4_4:48137582-48137601 | None:intergenic | 30.0% | |
| AAATGTATTGAGTACCTCAT+TGG | - | chr4_4:48137583-48137602 | None:intergenic | 30.0% | |
| ! | AATTGATTTCTGCAGAAAAC+CGG | + | chr4_4:48137720-48137739 | Msa0684650:intron | 30.0% |
| ATTAAAGACAGATTTAGACC+TGG | - | chr4_4:48137840-48137859 | None:intergenic | 30.0% | |
| CAAGGTGATTAAACATTCTA+GGG | - | chr4_4:48137864-48137883 | None:intergenic | 30.0% | |
| TCAAGGTGATTAAACATTCT+AGG | - | chr4_4:48137865-48137884 | None:intergenic | 30.0% | |
| !! | CAAGAGTTTGTTCTTTTTCA+AGG | - | chr4_4:48137882-48137901 | None:intergenic | 30.0% |
| CTTGAAAAAGAACAAACTCT+TGG | + | chr4_4:48137880-48137899 | Msa0684650:intron | 30.0% | |
| TATTTACTGTCTTGATCTCT+AGG | + | chr4_4:48138010-48138029 | Msa0684650:intron | 30.0% | |
| ATTTACTGTCTTGATCTCTA+GGG | + | chr4_4:48138011-48138030 | Msa0684650:intron | 30.0% | |
| !!! | ATCTCTAGGGAATTTTTTGT+CGG | + | chr4_4:48138024-48138043 | Msa0684650:intron | 30.0% |
| ! | ATGAAAGAAGCTACCTTTTA+TGG | - | chr4_4:48138116-48138135 | None:intergenic | 30.0% |
| TTATAATTCAGATGACAGAC+CGG | + | chr4_4:48138200-48138219 | Msa0684650:intron | 30.0% | |
| CTATTGTAACTAGATGGAAT+TGG | - | chr4_4:48138339-48138358 | None:intergenic | 30.0% | |
| CTTGTGAAAAAGAAACTAGT+TGG | - | chr4_4:48138362-48138381 | None:intergenic | 30.0% | |
| ! | ATTTTTGCATCGTAAGTGAT+TGG | - | chr4_4:48138422-48138441 | None:intergenic | 30.0% |
| ACCTTTAGACTTATCCTAAA+AGG | + | chr4_4:48138477-48138496 | Msa0684650:CDS | 30.0% | |
| AATCTACAACAATAAGAGGT+TGG | - | chr4_4:48138575-48138594 | None:intergenic | 30.0% | |
| GATGAATCTACAACAATAAG+AGG | - | chr4_4:48138579-48138598 | None:intergenic | 30.0% | |
| !! | ATGGCTCTAAAAGAAAATTC+TGG | - | chr4_4:48138845-48138864 | None:intergenic | 30.0% |
| GATTATTTGAACTTTGTAGG+TGG | - | chr4_4:48138979-48138998 | None:intergenic | 30.0% | |
| ! | CTAAATTTGATTAGAGCACT+TGG | - | chr4_4:48139068-48139087 | None:intergenic | 30.0% |
| CAAGTGCTCTAATCAAATTT+AGG | + | chr4_4:48139066-48139085 | Msa0684650:intron | 30.0% | |
| TTAATAATTGGAAGTGGTGA+TGG | + | chr4_4:48139347-48139366 | Msa0684650:intron | 30.0% | |
| CTTCTGATGAAAAACGTGTA+CGG | - | chr4_4:48133256-48133275 | None:intergenic | 35.0% | |
| GACCAATAATGTAAGGACTA+AGG | - | chr4_4:48133340-48133359 | None:intergenic | 35.0% | |
| TTGCATCAAAGAATGAGACA+TGG | + | chr4_4:48133907-48133926 | Msa0684650:CDS | 35.0% | |
| TCTTCTGATAAGATCTTCCT+TGG | - | chr4_4:48133999-48134018 | None:intergenic | 35.0% | |
| CAGAAGAAAACCAACATGAT+TGG | + | chr4_4:48134012-48134031 | Msa0684650:CDS | 35.0% | |
| ACATTAAAGCCCAATCATGT+TGG | - | chr4_4:48134025-48134044 | None:intergenic | 35.0% | |
| ! | ACTTCTTTGAGAAATCCAAC+AGG | - | chr4_4:48134083-48134102 | None:intergenic | 35.0% |
| TTTCTCAAAGAAGTTCCACT+TGG | + | chr4_4:48134089-48134108 | Msa0684650:CDS | 35.0% | |
| TTCTCAAAGAAGTTCCACTT+GGG | + | chr4_4:48134090-48134109 | Msa0684650:CDS | 35.0% | |
| TCAAGCACAGAAGACTAATT+TGG | + | chr4_4:48134145-48134164 | Msa0684650:CDS | 35.0% | |
| AACAAAATGTCCTCTGAGTT+CGG | - | chr4_4:48134276-48134295 | None:intergenic | 35.0% | |
| ! | AACCAATGTTCTCAAGCTTT+TGG | + | chr4_4:48134764-48134783 | Msa0684650:intron | 35.0% |
| TTCCAAAAGCTTGAGAACAT+TGG | - | chr4_4:48134769-48134788 | None:intergenic | 35.0% | |
| TCCGCTTGTCAAGAAAAAAT+TGG | + | chr4_4:48135136-48135155 | Msa0684650:CDS | 35.0% | |
| AATCGATCAAAAAACTCTGG+TGG | - | chr4_4:48135184-48135203 | None:intergenic | 35.0% | |
| ACCTTGTGAATGGTGTAATA+GGG | - | chr4_4:48135232-48135251 | None:intergenic | 35.0% | |
| TACCTTGTGAATGGTGTAAT+AGG | - | chr4_4:48135233-48135252 | None:intergenic | 35.0% | |
| CTACAGTATATTGATCCAAC+AGG | - | chr4_4:48135344-48135363 | None:intergenic | 35.0% | |
| TTGGATCAATATACTGTAGC+TGG | + | chr4_4:48135345-48135364 | Msa0684650:CDS | 35.0% | |
| TCGATATAACATTCACCACT+CGG | - | chr4_4:48135422-48135441 | None:intergenic | 35.0% | |
| ACACTATCAATCACTGAATG+AGG | + | chr4_4:48135458-48135477 | Msa0684650:CDS | 35.0% | |
| ACCCTAATGTAAATCTGTCT+TGG | + | chr4_4:48135690-48135709 | Msa0684650:intron | 35.0% | |
| ! | GGATTCAAAGCATCTATTGT+TGG | + | chr4_4:48135729-48135748 | Msa0684650:CDS | 35.0% |
| !! | TTTTGGCTGTCAATTTCAAG+AGG | + | chr4_4:48135862-48135881 | Msa0684650:intron | 35.0% |
| ! | AAATTTTCATGCAGACCTTC+TGG | - | chr4_4:48135953-48135972 | None:intergenic | 35.0% |
| ACACATATCCCAATTGTTGT+TGG | + | chr4_4:48136188-48136207 | Msa0684650:CDS | 35.0% | |
| ! | TTGTTGTTGGATCTCAAATG+CGG | + | chr4_4:48136201-48136220 | Msa0684650:CDS | 35.0% |
| TTATGCACATTGTAGATGAC+TGG | + | chr4_4:48136263-48136282 | Msa0684650:intron | 35.0% | |
| GGAAATCGGATCATTCTTTA+TGG | + | chr4_4:48136555-48136574 | Msa0684650:intron | 35.0% | |
| CTGCACAAAATTGAAGTGAA+GGG | - | chr4_4:48136779-48136798 | None:intergenic | 35.0% | |
| CTAATCGAATGAAGAGTGAT+TGG | - | chr4_4:48136887-48136906 | None:intergenic | 35.0% | |
| !!! | TACGCATTTTTAACTTCCCT+TGG | - | chr4_4:48136923-48136942 | None:intergenic | 35.0% |
| !! | GATAATGATTTCAGGTTTCG+CGG | + | chr4_4:48137017-48137036 | Msa0684650:intron | 35.0% |
| ATCTGCATAAGTGACTTCTT+TGG | - | chr4_4:48137059-48137078 | None:intergenic | 35.0% | |
| ! | TATGCTTCCTTTAGGTATTG+GGG | + | chr4_4:48137150-48137169 | Msa0684650:CDS | 35.0% |
| AAGCTAAAACTGGACATAGT+TGG | + | chr4_4:48137179-48137198 | Msa0684650:CDS | 35.0% | |
| AGCTAAAACTGGACATAGTT+GGG | + | chr4_4:48137180-48137199 | Msa0684650:CDS | 35.0% | |
| ! | ACAGTCTGATTTGATTTACC+AGG | - | chr4_4:48137317-48137336 | None:intergenic | 35.0% |
| TAAATGTCACTCGAAGGTAA+GGG | - | chr4_4:48137551-48137570 | None:intergenic | 35.0% | |
| ! | ATTGATTTCTGCAGAAAACC+GGG | + | chr4_4:48137721-48137740 | Msa0684650:intron | 35.0% |
| TTCAGAATTCAATATCGCCT+TGG | - | chr4_4:48137799-48137818 | None:intergenic | 35.0% | |
| TGGGCCATTCATATTAAGTT+CGG | + | chr4_4:48137900-48137919 | Msa0684650:intron | 35.0% | |
| GTGTCCGAACTTAATATGAA+TGG | - | chr4_4:48137907-48137926 | None:intergenic | 35.0% | |
| ATCAGAACAGAAGCCATAAA+AGG | + | chr4_4:48138100-48138119 | Msa0684650:CDS | 35.0% | |
| TCCGTTCAAGCTATTCTTTA+CGG | + | chr4_4:48138231-48138250 | Msa0684650:CDS | 35.0% | |
| TTTAATGTCCCAATTTCCAG+TGG | - | chr4_4:48138280-48138299 | None:intergenic | 35.0% | |
| GGAAATTGGGACATTAAAAC+CGG | + | chr4_4:48138282-48138301 | Msa0684650:CDS | 35.0% | |
| AGTTGGCTATTGTAACTAGA+TGG | - | chr4_4:48138345-48138364 | None:intergenic | 35.0% | |
| !!! | GCCTTTTAGGATAAGTCTAA+AGG | - | chr4_4:48138481-48138500 | None:intergenic | 35.0% |
| ! | TTTTACTAACAGCGCCTTTT+AGG | - | chr4_4:48138494-48138513 | None:intergenic | 35.0% |
| ATCATTCCAGGAAGATCAAT+TGG | - | chr4_4:48138531-48138550 | None:intergenic | 35.0% | |
| ACCACAAGAAAAACTGAAGA+AGG | - | chr4_4:48138612-48138631 | None:intergenic | 35.0% | |
| ! | TTCAGTTTTTCTTGTGGTAC+CGG | + | chr4_4:48138614-48138633 | Msa0684650:CDS | 35.0% |
| ! | ATACCATCCTATCAGTTTTG+TGG | + | chr4_4:48138806-48138825 | Msa0684650:CDS | 35.0% |
| TAGAGCCATTATTCAACTTC+AGG | + | chr4_4:48138856-48138875 | Msa0684650:CDS | 35.0% | |
| AGAGCCATTATTCAACTTCA+GGG | + | chr4_4:48138857-48138876 | Msa0684650:CDS | 35.0% | |
| TCATCCCTGAAGTTGAATAA+TGG | - | chr4_4:48138864-48138883 | None:intergenic | 35.0% | |
| TGCTCTAATCAAATTTAGGG+TGG | + | chr4_4:48139070-48139089 | Msa0684650:intron | 35.0% | |
| ! | TCAAATTTAGGGTGGCAAAA+TGG | + | chr4_4:48139078-48139097 | Msa0684650:intron | 35.0% |
| ! | CAAATTTAGGGTGGCAAAAT+GGG | + | chr4_4:48139079-48139098 | Msa0684650:intron | 35.0% |
| ! | TCTTTGAGAAATCCAACAGG+TGG | - | chr4_4:48134080-48134099 | None:intergenic | 40.0% |
| TCTCAAAGAAGTTCCACTTG+GGG | + | chr4_4:48134091-48134110 | Msa0684650:CDS | 40.0% | |
| !! | ATAGGTTGATTTGGAGCTTC+AGG | + | chr4_4:48134192-48134211 | Msa0684650:CDS | 40.0% |
| ! | GAACTCAGAGGACATTTTGT+TGG | + | chr4_4:48134275-48134294 | Msa0684650:CDS | 40.0% |
| CAATGTGATTGTAGCAACCA+GGG | + | chr4_4:48134399-48134418 | Msa0684650:intron | 40.0% | |
| !!! | GCAACCAGGGTTTTAAATAG+TGG | + | chr4_4:48134412-48134431 | Msa0684650:intron | 40.0% |
| ! | ACGACCACTATTTAAAACCC+TGG | - | chr4_4:48134419-48134438 | None:intergenic | 40.0% |
| !!! | AGGGTTTTAAATAGTGGTCG+TGG | + | chr4_4:48134418-48134437 | Msa0684650:intron | 40.0% |
| TTATGTCGAAGCCCAAATCA+TGG | + | chr4_4:48134544-48134563 | Msa0684650:intron | 40.0% | |
| AAGGTTGGCAACCATGATTT+GGG | - | chr4_4:48134558-48134577 | None:intergenic | 40.0% | |
| AAAGGTTGGCAACCATGATT+TGG | - | chr4_4:48134559-48134578 | None:intergenic | 40.0% | |
| !! | AGAACATTGGTTCCTGTTTG+GGG | - | chr4_4:48134756-48134775 | None:intergenic | 40.0% |
| !! | GAGAACATTGGTTCCTGTTT+GGG | - | chr4_4:48134757-48134776 | None:intergenic | 40.0% |
| !! | TGAGAACATTGGTTCCTGTT+TGG | - | chr4_4:48134758-48134777 | None:intergenic | 40.0% |
| TTGCAGAAGCTGAAAATTGC+AGG | - | chr4_4:48134972-48134991 | None:intergenic | 40.0% | |
| CACAAAGAATGATAGCCTGA+AGG | + | chr4_4:48135084-48135103 | Msa0684650:CDS | 40.0% | |
| TAGCCTGAAGGAGAAAATGT+CGG | + | chr4_4:48135096-48135115 | Msa0684650:CDS | 40.0% | |
| TCCCTATTACACCATTCACA+AGG | + | chr4_4:48135228-48135247 | Msa0684650:CDS | 40.0% | |
| AGTATATTGATCCAACAGGC+CGG | - | chr4_4:48135340-48135359 | None:intergenic | 40.0% | |
| AAACCCTCAAGCTCTCAAAA+TGG | + | chr4_4:48135368-48135387 | Msa0684650:CDS | 40.0% | |
| !! | TCACCATTTTGAGAGCTTGA+GGG | - | chr4_4:48135374-48135393 | None:intergenic | 40.0% |
| AAGCTCTCAAAATGGTGACA+TGG | + | chr4_4:48135376-48135395 | Msa0684650:CDS | 40.0% | |
| TCTCAAAATGGTGACATGGA+TGG | + | chr4_4:48135380-48135399 | Msa0684650:CDS | 40.0% | |
| CAATCACTGAATGAGGAAAC+TGG | + | chr4_4:48135465-48135484 | Msa0684650:CDS | 40.0% | |
| GAATGATGTTATTCACCGGT+TGG | + | chr4_4:48135546-48135565 | Msa0684650:intron | 40.0% | |
| TGTCTTGGTATGCTATATGC+AGG | + | chr4_4:48135705-48135724 | Msa0684650:intron | 40.0% | |
| GTCTTGGTATGCTATATGCA+GGG | + | chr4_4:48135706-48135725 | Msa0684650:intron | 40.0% | |
| TCTTGGTATGCTATATGCAG+GGG | + | chr4_4:48135707-48135726 | Msa0684650:intron | 40.0% | |
| ! | AAAAGCATGGCTTGTCGAAA+AGG | - | chr4_4:48135759-48135778 | None:intergenic | 40.0% |
| !! | TTCGACAAGCCATGCTTTTT+AGG | + | chr4_4:48135760-48135779 | Msa0684650:CDS | 40.0% |
| GCAAGCAATCCTAAAAAGCA+TGG | - | chr4_4:48135772-48135791 | None:intergenic | 40.0% | |
| !!! | TTCTTGTGTTTTGGCGTGTT+AGG | + | chr4_4:48136534-48136553 | Msa0684650:intron | 40.0% |
| !! | GTTTTGGCGTGTTAGGAAAT+CGG | + | chr4_4:48136541-48136560 | Msa0684650:intron | 40.0% |
| CCTGCACAAAATTGAAGTGA+AGG | - | chr4_4:48136780-48136799 | None:intergenic | 40.0% | |
| ! | CCTTCACTTCAATTTTGTGC+AGG | + | chr4_4:48136777-48136796 | Msa0684650:intron | 40.0% |
| AGGTTGTCTGCTATTCTCTT+TGG | - | chr4_4:48136809-48136828 | None:intergenic | 40.0% | |
| AAGAGAATAGCAGACAACCT+TGG | + | chr4_4:48136809-48136828 | Msa0684650:CDS | 40.0% | |
| CTTCATTCTCTGTTGTTCCA+AGG | - | chr4_4:48136829-48136848 | None:intergenic | 40.0% | |
| TTCGAAACCCCAATACCTAA+AGG | - | chr4_4:48137160-48137179 | None:intergenic | 40.0% | |
| GCTAAAACTGGACATAGTTG+GGG | + | chr4_4:48137181-48137200 | Msa0684650:CDS | 40.0% | |
| !! | CAGCACCAGAAAGTGTTAAA+TGG | - | chr4_4:48137211-48137230 | None:intergenic | 40.0% |
| CTGCATACTCCTTTGTCATT+AGG | + | chr4_4:48137369-48137388 | Msa0684650:intron | 40.0% | |
| GTAAATGTCACTCGAAGGTA+AGG | - | chr4_4:48137552-48137571 | None:intergenic | 40.0% | |
| AGAAGGTAAATGTCACTCGA+AGG | - | chr4_4:48137557-48137576 | None:intergenic | 40.0% | |
| ATTTACCTTCTCTCCCAATG+AGG | + | chr4_4:48137566-48137585 | Msa0684650:CDS | 40.0% | |
| CTGGGTCATTAGAAGATATG+TGG | - | chr4_4:48137626-48137645 | None:intergenic | 40.0% | |
| ! | GTTCAATGTTGATGAAGTCC+CGG | - | chr4_4:48137742-48137761 | None:intergenic | 40.0% |
| TGAACTTTCGTGTACCATCT+TGG | + | chr4_4:48137757-48137776 | Msa0684650:CDS | 40.0% | |
| GATGATAAGAGGCAACTGAA+GGG | - | chr4_4:48138083-48138102 | None:intergenic | 40.0% | |
| TGATGATAAGAGGCAACTGA+AGG | - | chr4_4:48138084-48138103 | None:intergenic | 40.0% | |
| GCTTCTGTTCTGATGATAAG+AGG | - | chr4_4:48138094-48138113 | None:intergenic | 40.0% | |
| CCCGTAAAGAATAGCTTGAA+CGG | - | chr4_4:48138235-48138254 | None:intergenic | 40.0% | |
| CCGTTCAAGCTATTCTTTAC+GGG | + | chr4_4:48138232-48138251 | Msa0684650:CDS | 40.0% | |
| CTAGAACCAATTGATCTTCC+TGG | + | chr4_4:48138522-48138541 | Msa0684650:CDS | 40.0% | |
| TGGTGACTTACAATCATTCC+AGG | - | chr4_4:48138543-48138562 | None:intergenic | 40.0% | |
| ! | ACAACAATAAGAGGTTGGTC+TGG | - | chr4_4:48138570-48138589 | None:intergenic | 40.0% |
| ATTGTTGTAGATTCATCCCG+TGG | + | chr4_4:48138582-48138601 | Msa0684650:CDS | 40.0% | |
| ! | GCCTTCTTCAGTTTTTCTTG+TGG | + | chr4_4:48138608-48138627 | Msa0684650:CDS | 40.0% |
| ! | TCAGTTTTTCTTGTGGTACC+GGG | + | chr4_4:48138615-48138634 | Msa0684650:CDS | 40.0% |
| ! | TGATTTTGTCCATCCAATCC+CGG | - | chr4_4:48138636-48138655 | None:intergenic | 40.0% |
| GTATTGCCTTAATCCTTTCC+CGG | - | chr4_4:48138790-48138809 | None:intergenic | 40.0% | |
| TAGCCACAAAACTGATAGGA+TGG | - | chr4_4:48138812-48138831 | None:intergenic | 40.0% | |
| CCTTTAGCCACAAAACTGAT+AGG | - | chr4_4:48138816-48138835 | None:intergenic | 40.0% | |
| !! | CCTATCAGTTTTGTGGCTAA+AGG | + | chr4_4:48138813-48138832 | Msa0684650:CDS | 40.0% |
| !! | ATCAGTTTTGTGGCTAAAGG+AGG | + | chr4_4:48138816-48138835 | Msa0684650:CDS | 40.0% |
| CTGATGAAAAACGTGTACGG+TGG | - | chr4_4:48133253-48133272 | None:intergenic | 45.0% | |
| TTTATGGCACTTATGCTGCG+TGG | + | chr4_4:48133819-48133838 | Msa0684650:CDS | 45.0% | |
| CGAAACGTATGTGACTGAGT+CGG | - | chr4_4:48133876-48133895 | None:intergenic | 45.0% | |
| CGACTCAGTCACATACGTTT+CGG | + | chr4_4:48133874-48133893 | Msa0684650:CDS | 45.0% | |
| TAGTCTTCTGTGCTTGAGCA+TGG | - | chr4_4:48134142-48134161 | None:intergenic | 45.0% | |
| ! | GATTTGGAGCTTCAGGAAGA+CGG | + | chr4_4:48134199-48134218 | Msa0684650:CDS | 45.0% |
| GAACCTAATACCGAACTCAG+AGG | + | chr4_4:48134263-48134282 | Msa0684650:CDS | 45.0% | |
| TGTCCTCTGAGTTCGGTATT+AGG | - | chr4_4:48134269-48134288 | None:intergenic | 45.0% | |
| GCAATGTGATTGTAGCAACC+AGG | + | chr4_4:48134398-48134417 | Msa0684650:intron | 45.0% | |
| CAATGTCAAAGATCGCAACG+TGG | - | chr4_4:48134456-48134475 | None:intergenic | 45.0% | |
| !! | GAACATTGGTTCCTGTTTGG+GGG | - | chr4_4:48134755-48134774 | None:intergenic | 45.0% |
| AGAAGCTGAAAATTGCAGGC+AGG | - | chr4_4:48134968-48134987 | None:intergenic | 45.0% | |
| ! | TGAGTGCATCAGCTCTAATG+TGG | + | chr4_4:48135056-48135075 | Msa0684650:CDS | 45.0% |
| ! | GAGTGCATCAGCTCTAATGT+GGG | + | chr4_4:48135057-48135076 | Msa0684650:CDS | 45.0% |
| CAGGCTATCATTCTTTGTGC+TGG | - | chr4_4:48135083-48135102 | None:intergenic | 45.0% | |
| !! | AAAATGTCGGCTCTTGTTGC+CGG | + | chr4_4:48135109-48135128 | Msa0684650:CDS | 45.0% |
| TTCTTGACAAGCGGATAGAC+CGG | - | chr4_4:48135131-48135150 | None:intergenic | 45.0% | |
| CAACTTTGACAGATCTTGGC+CGG | + | chr4_4:48135318-48135337 | Msa0684650:intron | 45.0% | |
| !! | GTCACCATTTTGAGAGCTTG+AGG | - | chr4_4:48135375-48135394 | None:intergenic | 45.0% |
| !! | CGATTACTTTTACGACCGAG+TGG | + | chr4_4:48135404-48135423 | Msa0684650:CDS | 45.0% |
| TCACTGAATGAGGAAACTGG+AGG | + | chr4_4:48135468-48135487 | Msa0684650:CDS | 45.0% | |
| CTTGGTATGCTATATGCAGG+GGG | + | chr4_4:48135708-48135727 | Msa0684650:intron | 45.0% | |
| ! | TTTAGGATTGCTTGCCGTAC+AGG | + | chr4_4:48135777-48135796 | Msa0684650:CDS | 45.0% |
| GTTGTTCTGCTCACCTACAA+AGG | + | chr4_4:48136053-48136072 | Msa0684650:intron | 45.0% | |
| CAAATGCGGTATGAAGTCAC+CGG | + | chr4_4:48136215-48136234 | Msa0684650:CDS | 45.0% | |
| TCACCGGTGATCCACTTTAT+AGG | + | chr4_4:48136231-48136250 | Msa0684650:CDS | 45.0% | |
| CACCGGTGATCCACTTTATA+GGG | + | chr4_4:48136232-48136251 | Msa0684650:CDS | 45.0% | |
| CACCCTATAAAGTGGATCAC+CGG | - | chr4_4:48136237-48136256 | None:intergenic | 45.0% | |
| CTTCTTTGGTCCATCTGAAC+AGG | - | chr4_4:48137045-48137064 | None:intergenic | 45.0% | |
| TATGAGCGTGCCTTAACGAA+TGG | + | chr4_4:48137082-48137101 | Msa0684650:CDS | 45.0% | |
| GCCTTAACGAATGGTGTACT+CGG | + | chr4_4:48137091-48137110 | Msa0684650:CDS | 45.0% | |
| TCCGAGTACACCATTCGTTA+AGG | - | chr4_4:48137095-48137114 | None:intergenic | 45.0% | |
| GGTGTACTCGGAATTCAAAG+AGG | + | chr4_4:48137103-48137122 | Msa0684650:CDS | 45.0% | |
| GGGGTTTCGAAAGCTAAAAC+TGG | + | chr4_4:48137169-48137188 | Msa0684650:CDS | 45.0% | |
| !! | AACACTTTCTGGTGCTGCTA+TGG | + | chr4_4:48137214-48137233 | Msa0684650:CDS | 45.0% |
| AACAACTGTCTGAGTGAGCA+AGG | - | chr4_4:48137511-48137530 | None:intergenic | 45.0% | |
| AGTTGTTCCAGCAGCTTCAT+CGG | + | chr4_4:48137524-48137543 | Msa0684650:CDS | 45.0% | |
| TCTAATGACCCAGCATGTGT+TGG | + | chr4_4:48137633-48137652 | Msa0684650:intron | 45.0% | |
| TCAAAGGTCCAACACATGCT+GGG | - | chr4_4:48137644-48137663 | None:intergenic | 45.0% | |
| TTCAAAGGTCCAACACATGC+TGG | - | chr4_4:48137645-48137664 | None:intergenic | 45.0% | |
| GCTTGAACGGATGCATATTC+CGG | - | chr4_4:48138222-48138241 | None:intergenic | 45.0% | |
| GTGTGACCAGCAAGAAGATA+TGG | - | chr4_4:48138258-48138277 | None:intergenic | 45.0% | |
| TGGTCACACCACTGGAAATT+GGG | + | chr4_4:48138269-48138288 | Msa0684650:CDS | 45.0% | |
| !! | TGCAACAGCTTTGTTAGCAC+CGG | - | chr4_4:48138304-48138323 | None:intergenic | 45.0% |
| ATGCAAAAATCACCTGAGCC+TGG | + | chr4_4:48138432-48138451 | Msa0684650:CDS | 45.0% | |
| !! | TAAGAGGTTGGTCTGGTTCT+TGG | - | chr4_4:48138563-48138582 | None:intergenic | 45.0% |
| !! | TTTTCTTGTGGTACCGGGAT+TGG | + | chr4_4:48138620-48138639 | Msa0684650:CDS | 45.0% |
| GTGTATAGCGATATGAGCTC+TGG | + | chr4_4:48138696-48138715 | Msa0684650:CDS | 45.0% | |
| !! | TGCAAGTCTGATTCTGAAGC+TGG | + | chr4_4:48138738-48138757 | Msa0684650:CDS | 45.0% |
| CAAGCAGCAAGTTTCGTTTC+CGG | + | chr4_4:48138768-48138787 | Msa0684650:CDS | 45.0% | |
| AAGCAGCAAGTTTCGTTTCC+GGG | + | chr4_4:48138769-48138788 | Msa0684650:CDS | 45.0% | |
| TCGTTTCCGGGAAAGGATTA+AGG | + | chr4_4:48138781-48138800 | Msa0684650:CDS | 45.0% | |
| !!! | AAAATTTCAAAAATAATTTT+GGG | - | chr4_4:48136124-48136143 | None:intergenic | 5.0% |
| !! | TTATAAATTTATAATTTCAA+AGG | - | chr4_4:48137660-48137679 | None:intergenic | 5.0% |
| !! | TTTACTTATTTATTAATAAT+TGG | + | chr4_4:48139335-48139354 | Msa0684650:intron | 5.0% |
| CCTCTGATGAAAGACGTGTC+TGG | - | chr4_4:48133163-48133182 | None:intergenic | 50.0% | |
| CCAGACACGTCTTTCATCAG+AGG | + | chr4_4:48133160-48133179 | Msa0684650:five_prime_UTR | 50.0% | |
| ACCGACCGATGAATCTGCTT+GGG | + | chr4_4:48133962-48133981 | Msa0684650:CDS | 50.0% | |
| AGCTGCCCAAGCAGATTCAT+CGG | - | chr4_4:48133970-48133989 | None:intergenic | 50.0% | |
| GGTGTGTTTAAGCCACCTGT+TGG | + | chr4_4:48134065-48134084 | Msa0684650:CDS | 50.0% | |
| AAGTTCCACTTGGGGATGTG+AGG | + | chr4_4:48134099-48134118 | Msa0684650:CDS | 50.0% | |
| TGGTACACCGTATGGAGGAT+GGG | + | chr4_4:48134238-48134257 | Msa0684650:CDS | 50.0% | |
| AGTGGTCGTGGTAACAGTTG+TGG | + | chr4_4:48134430-48134449 | Msa0684650:intron | 50.0% | |
| ! | ATTGGTTCCTGTTTGGGGGA+GGG | - | chr4_4:48134751-48134770 | None:intergenic | 50.0% |
| ! | GAGCCGACATTTTCTCCTTC+AGG | - | chr4_4:48135102-48135121 | None:intergenic | 50.0% |
| GTGTAATAGGGAGCCCAAAC+AGG | - | chr4_4:48135220-48135239 | None:intergenic | 50.0% | |
| TCTTCTCACAGCTATGCGAC+TGG | + | chr4_4:48136589-48136608 | Msa0684650:CDS | 50.0% | |
| GGACATCAGTCCGTGAATTC+TGG | + | chr4_4:48136614-48136633 | Msa0684650:CDS | 50.0% | |
| !! | TTCTGGTGCTGCTATGGAAC+AGG | + | chr4_4:48137220-48137239 | Msa0684650:CDS | 50.0% |
| GAGTACCTCATTGGGAGAGA+AGG | - | chr4_4:48137574-48137593 | None:intergenic | 50.0% | |
| ACTTTATCTCTGCCAGCTCC+AGG | + | chr4_4:48137819-48137838 | Msa0684650:CDS | 50.0% | |
| GACAGATTTAGACCTGGAGC+TGG | - | chr4_4:48137834-48137853 | None:intergenic | 50.0% | |
| ! | TTTTGTCGGTCACACGACAG+TGG | + | chr4_4:48138038-48138057 | Msa0684650:CDS | 50.0% |
| TACGGGCCATATCTTCTTGC+TGG | + | chr4_4:48138249-48138268 | Msa0684650:CDS | 50.0% | |
| CTGGTCACACCACTGGAAAT+TGG | + | chr4_4:48138268-48138287 | Msa0684650:CDS | 50.0% | |
| TGAAGAGCGACATCAGTACC+AGG | - | chr4_4:48138453-48138472 | None:intergenic | 50.0% | |
| GTTGTAGATTCATCCCGTGG+CGG | + | chr4_4:48138585-48138604 | Msa0684650:CDS | 50.0% | |
| TTGTAGATTCATCCCGTGGC+GGG | + | chr4_4:48138586-48138605 | Msa0684650:CDS | 50.0% | |
| ! | AGCGATATGAGCTCTGGTTC+AGG | + | chr4_4:48138702-48138721 | Msa0684650:CDS | 50.0% |
| CTGGTTCAGGAGTTAAGCTC+AGG | + | chr4_4:48138715-48138734 | Msa0684650:CDS | 50.0% | |
| !! | CGGAAACGAAACTTGCTGCT+TGG | - | chr4_4:48138770-48138789 | None:intergenic | 50.0% |
| GCAAGTTTCGTTTCCGGGAA+AGG | + | chr4_4:48138774-48138793 | Msa0684650:CDS | 50.0% | |
| GGGTGGCAAAATGGGATGAT+TGG | + | chr4_4:48139087-48139106 | Msa0684650:intron | 50.0% | |
| !! | AATTGGAAGTGGTGATGGCC+AGG | + | chr4_4:48139352-48139371 | Msa0684650:intron | 50.0% |
| !! | ATTGGAAGTGGTGATGGCCA+GGG | + | chr4_4:48139353-48139372 | Msa0684650:intron | 50.0% |
| GGTGATCGCTATCCTATGTC+TGG | + | chr4_4:48139419-48139438 | Msa0684650:three_prime_UTR | 50.0% | |
| GATCGCTATCCTATGTCTGG+TGG | + | chr4_4:48139422-48139441 | Msa0684650:three_prime_UTR | 50.0% | |
| CACCGACCGATGAATCTGCT+TGG | + | chr4_4:48133961-48133980 | Msa0684650:CDS | 55.0% | |
| GCCCAAGCAGATTCATCGGT+CGG | - | chr4_4:48133966-48133985 | None:intergenic | 55.0% | |
| CTTGGGCAGCTTTGCTTCCA+AGG | + | chr4_4:48133979-48133998 | Msa0684650:CDS | 55.0% | |
| AGCAACCTCACATCCCCAAG+TGG | - | chr4_4:48134107-48134126 | None:intergenic | 55.0% | |
| GGGGATGTGAGGTTGCTTGA+AGG | + | chr4_4:48134110-48134129 | Msa0684650:CDS | 55.0% | |
| CCATACGGTGTACCAGGAGT+CGG | - | chr4_4:48134233-48134252 | None:intergenic | 55.0% | |
| ACTCCTGGTACACCGTATGG+AGG | + | chr4_4:48134233-48134252 | Msa0684650:CDS | 55.0% | |
| CATCCTCCATACGGTGTACC+AGG | - | chr4_4:48134239-48134258 | None:intergenic | 55.0% | |
| CTGGTACACCGTATGGAGGA+TGG | + | chr4_4:48134237-48134256 | Msa0684650:CDS | 55.0% | |
| TACACCGTATGGAGGATGGG+AGG | + | chr4_4:48134241-48134260 | Msa0684650:CDS | 55.0% | |
| GGTTCCTCCCATCCTCCATA+CGG | - | chr4_4:48134248-48134267 | None:intergenic | 55.0% | |
| TTGGTTCCTGTTTGGGGGAG+GGG | - | chr4_4:48134750-48134769 | None:intergenic | 55.0% | |
| !! | CATTGGTTCCTGTTTGGGGG+AGG | - | chr4_4:48134752-48134771 | None:intergenic | 55.0% |
| TCTCACAGCTATGCGACTGG+AGG | + | chr4_4:48136592-48136611 | Msa0684650:CDS | 55.0% | |
| CTCACAGCTATGCGACTGGA+GGG | + | chr4_4:48136593-48136612 | Msa0684650:CDS | 55.0% | |
| TTTCGCGGCACCTGTTCAGA+TGG | + | chr4_4:48137032-48137051 | Msa0684650:CDS | 55.0% | |
| !! | GGTGCTGCTATGGAACAGGT+AGG | + | chr4_4:48137224-48137243 | Msa0684650:intron | 55.0% |
| TAAGGGTCCGATGAAGCTGC+TGG | - | chr4_4:48137534-48137553 | None:intergenic | 55.0% | |
| CGTGTACCATCTTGGAGTCG+TGG | + | chr4_4:48137765-48137784 | Msa0684650:CDS | 55.0% | |
| CCATCTTGGAGTCGTGGAGA+CGG | + | chr4_4:48137771-48137790 | Msa0684650:CDS | 55.0% | |
| CTGAAGGGTCAGCTTGTCAC+CGG | - | chr4_4:48138068-48138087 | None:intergenic | 55.0% | |
| CTTCTTGCTGGTCACACCAC+TGG | + | chr4_4:48138261-48138280 | Msa0684650:CDS | 55.0% | |
| AAACTGAAGAAGGCCCGCCA+CGG | - | chr4_4:48138602-48138621 | None:intergenic | 55.0% | |
| ! | CTTGTGGTACCGGGATTGGA+TGG | + | chr4_4:48138624-48138643 | Msa0684650:CDS | 55.0% |
| CGCTATCCTATGTCTGGTGG+TGG | + | chr4_4:48139425-48139444 | Msa0684650:three_prime_UTR | 55.0% | |
| TGGAGCTTCAGGAAGACGGC+TGG | + | chr4_4:48134203-48134222 | Msa0684650:CDS | 60.0% | |
| !! | ACGGCTGGTTTACCGACTCC+TGG | + | chr4_4:48134218-48134237 | Msa0684650:CDS | 60.0% |
| CCGACTCCTGGTACACCGTA+TGG | + | chr4_4:48134230-48134249 | Msa0684650:CDS | 60.0% | |
| TACCTACCCCTCCCCCAAAC+AGG | + | chr4_4:48134741-48134760 | Msa0684650:intron | 60.0% | |
| TTCCTGTTTGGGGGAGGGGT+AGG | - | chr4_4:48134746-48134765 | None:intergenic | 60.0% | |
| ACAGATCTTGGCCGGCCTGT+TGG | + | chr4_4:48135326-48135345 | Msa0684650:intron | 60.0% | |
| CCGTCTCCACGACTCCAAGA+TGG | - | chr4_4:48137774-48137793 | None:intergenic | 60.0% | |
| GTCACACGACAGTGGAGTGC+CGG | + | chr4_4:48138046-48138065 | Msa0684650:CDS | 60.0% | |
| GCGACATCAGTACCAGGCTC+AGG | - | chr4_4:48138447-48138466 | None:intergenic | 60.0% | |
| AACTGAAGAAGGCCCGCCAC+GGG | - | chr4_4:48138601-48138620 | None:intergenic | 60.0% | |
| GGTTGTGGTCAGCAGCTGTG+TGG | + | chr4_4:48139395-48139414 | Msa0684650:three_prime_UTR | 60.0% | |
| TGTGGTCAGCAGCTGTGTGG+TGG | + | chr4_4:48139398-48139417 | Msa0684650:three_prime_UTR | 60.0% | |
| ! | GAGTCGTGGAGACGGTGCCA+AGG | + | chr4_4:48137779-48137798 | Msa0684650:CDS | 65.0% |
| GCTGCTGACCACAACCGCGT+CGG | - | chr4_4:48139391-48139410 | None:intergenic | 65.0% | |
| ! | GGTGATGGCCAGGGAGCTGC+TGG | + | chr4_4:48139362-48139381 | Msa0684650:intron | 70.0% |
| GATGGCCAGGGAGCTGCTGG+CGG | + | chr4_4:48139365-48139384 | Msa0684650:intron | 70.0% | |
| ! | GTCGGCCGCCAGCAGCTCCC+TGG | - | chr4_4:48139373-48139392 | None:intergenic | 80.0% |
| ! | GGAGCTGCTGGCGGCCGACG+CGG | + | chr4_4:48139374-48139393 | Msa0684650:three_prime_UTR | 80.0% |
| ! | GCTGGCGGCCGACGCGGTTG+TGG | + | chr4_4:48139380-48139399 | Msa0684650:three_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 48133134 | 48139450 | 48133134 | ID=Msa0684650;Name=Msa0684650 |
| chr4_4 | mRNA | 48133134 | 48139450 | 48133134 | ID=Msa0684650-mRNA-1;Parent=Msa0684650;Name=Msa0684650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=561|1|1|1|0.84|0.71|14|128|847 |
| chr4_4 | exon | 48133134 | 48133690 | 48133134 | ID=Msa0684650-mRNA-1:exon:11892;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48133788 | 48134296 | 48133788 | ID=Msa0684650-mRNA-1:exon:11893;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48135047 | 48135249 | 48135047 | ID=Msa0684650-mRNA-1:exon:11894;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48135330 | 48135527 | 48135330 | ID=Msa0684650-mRNA-1:exon:11895;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48135727 | 48135798 | 48135727 | ID=Msa0684650-mRNA-1:exon:11896;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48136158 | 48136253 | 48136158 | ID=Msa0684650-mRNA-1:exon:11897;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48136556 | 48136635 | 48136556 | ID=Msa0684650-mRNA-1:exon:11898;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48136799 | 48136877 | 48136799 | ID=Msa0684650-mRNA-1:exon:11899;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48137031 | 48137241 | 48137031 | ID=Msa0684650-mRNA-1:exon:11900;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48137391 | 48137587 | 48137391 | ID=Msa0684650-mRNA-1:exon:11901;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48137735 | 48137840 | 48137735 | ID=Msa0684650-mRNA-1:exon:11902;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48138032 | 48138121 | 48138032 | ID=Msa0684650-mRNA-1:exon:11903;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48138211 | 48138968 | 48138211 | ID=Msa0684650-mRNA-1:exon:11904;Parent=Msa0684650-mRNA-1 |
| chr4_4 | exon | 48139374 | 48139450 | 48139374 | ID=Msa0684650-mRNA-1:exon:11905;Parent=Msa0684650-mRNA-1 |
| chr4_4 | five_prime_UTR | 48133134 | 48133690 | 48133134 | ID=Msa0684650-mRNA-1:five_prime_utr;Parent=Msa0684650-mRNA-1 |
| chr4_4 | five_prime_UTR | 48133788 | 48133791 | 48133788 | ID=Msa0684650-mRNA-1:five_prime_utr;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48133792 | 48134296 | 48133792 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48135047 | 48135249 | 48135047 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48135330 | 48135527 | 48135330 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48135727 | 48135798 | 48135727 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48136158 | 48136253 | 48136158 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48136556 | 48136635 | 48136556 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48136799 | 48136877 | 48136799 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48137031 | 48137241 | 48137031 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48137391 | 48137587 | 48137391 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48137735 | 48137840 | 48137735 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48138032 | 48138121 | 48138032 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | CDS | 48138211 | 48138917 | 48138211 | ID=Msa0684650-mRNA-1:cds;Parent=Msa0684650-mRNA-1 |
| chr4_4 | three_prime_UTR | 48138918 | 48138968 | 48138918 | ID=Msa0684650-mRNA-1:three_prime_utr;Parent=Msa0684650-mRNA-1 |
| chr4_4 | three_prime_UTR | 48139374 | 48139450 | 48139374 | ID=Msa0684650-mRNA-1:three_prime_utr;Parent=Msa0684650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
