AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1418840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418840 MtrunA17_Chr0c12g0493641 98.973 584 6 0 1 584 1 584 0.0 1196
Msa1418840 MtrunA17_Chr4g0077041 82.156 269 6 1 287 555 1 227 1.49e-157 450
Msa1418840 MtrunA17_Chr4g0077021 97.297 111 3 0 1 111 1 111 1.18e-72 228
Msa1418840 MtrunA17_Chr1g0176461 31.681 565 319 21 38 571 42 570 3.29e-63 218
Msa1418840 MtrunA17_Chr4g0077031 100.000 70 0 0 152 221 3 72 2.26e-41 145
Msa1418840 MtrunA17_Chr8g0373291 24.744 586 325 29 45 555 4 548 1.60e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418840 AT1G57770.1 80.952 525 100 0 60 584 50 574 0.0 900
Msa1418840 AT1G06820.1 31.758 529 310 16 60 571 75 569 3.00e-65 224
Msa1418840 AT1G06820.3 31.758 529 310 16 60 571 75 569 4.79e-65 223
Msa1418840 AT1G06820.4 34.181 354 216 9 224 571 108 450 7.56e-53 187
Msa1418840 AT1G06820.2 29.501 461 276 15 60 504 75 502 1.90e-44 166
Msa1418840 AT5G49555.1 22.968 566 343 25 52 555 3 537 8.31e-14 74.7

Find 172 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCAAAGAGTCAAGTATT+TGG 0.236602 tig0024643:-54957 None:intergenic
ATTGCTCACAACAGCCTTCT+TGG 0.241353 tig0024643:-55707 None:intergenic
TGCTCAAGTTCTTGATGCTT+TGG 0.242947 tig0024643:+54609 Msa1418840:CDS
GATATTGAAAGAAAGGAAAT+TGG 0.252127 tig0024643:+54106 Msa1418840:five_prime_UTR
CACCAACATAATATTTGATT+TGG 0.272437 tig0024643:+54182 Msa1418840:five_prime_UTR
TCAAGAATGGCAGAAGCTTT+TGG 0.272982 tig0024643:+54759 Msa1418840:CDS
TTACTTTCTTTCTTGCTTGC+TGG 0.273947 tig0024643:+55012 Msa1418840:CDS
TGCCATTCTTGAACAGCTTC+AGG 0.275584 tig0024643:-54748 None:intergenic
GAGTCAAGTATTTGGGAAAA+AGG 0.286218 tig0024643:-54949 None:intergenic
GCTCAAGTTCTTGATGCTTT+GGG 0.288521 tig0024643:+54610 Msa1418840:CDS
ATAATATTTGATTTGGTGTT+TGG 0.296031 tig0024643:+54189 Msa1418840:five_prime_UTR
TTCCAAAGTCTTACTCAAAT+AGG 0.312564 tig0024643:+55773 Msa1418840:CDS
ATCATATAGTTGTAAATGAT+TGG 0.312848 tig0024643:+55960 Msa1418840:CDS
AACTCAAATGGTTCAGTTCC+TGG 0.320765 tig0024643:-56088 None:intergenic
ATCTTTCATGCATCTCCATT+TGG 0.323021 tig0024643:+55819 Msa1418840:CDS
CTGAGGACCCATTTGGAAAA+AGG 0.326579 tig0024643:-54896 None:intergenic
AGTTTCTAATACTTGGTAGA+TGG 0.333039 tig0024643:-56670 None:intergenic
GCTGGTACAGATACCTTTCC+TGG 0.338263 tig0024643:+56395 Msa1418840:CDS
TTGCAAAGAGTCAAGTATTT+GGG 0.338675 tig0024643:-54956 None:intergenic
AGCTTTAAGATTTCTGTATT+CGG 0.338946 tig0024643:-56137 None:intergenic
CTATCTGTTCGAGGAGATTT+CGG 0.340613 tig0024643:+54826 Msa1418840:CDS
GTGTTACATGCTTATCTTCC+AGG 0.349073 tig0024643:+56070 Msa1418840:CDS
CAACAATAAAGGTGTGGAAT+TGG 0.355420 tig0024643:-56428 None:intergenic
TCTTTCATGCATCTCCATTT+GGG 0.358441 tig0024643:+55820 Msa1418840:CDS
TCCCAGCTGCTTGATGCAAT+TGG 0.358531 tig0024643:+56542 Msa1418840:CDS
CGAAGAGGATATTGAAAGAA+AGG 0.362395 tig0024643:+54099 Msa1418840:five_prime_UTR
CCTGCGCTACTTATGATTCA+TGG 0.371994 tig0024643:+54644 Msa1418840:CDS
AATAGTACATAAACTTTGTA+TGG 0.385743 tig0024643:+56603 Msa1418840:three_prime_UTR
GAAACAGATGTAATTGTGAT+TGG 0.389065 tig0024643:+54400 Msa1418840:CDS
ATCCTATTTGAGTAAGACTT+TGG 0.389095 tig0024643:-55775 None:intergenic
CTCACTCTCATTACATTACA+AGG 0.391228 tig0024643:-54268 None:intergenic
TGGAGTCTCCACAACAATAA+AGG 0.393345 tig0024643:-56439 None:intergenic
TACACCCCTCATCGCATTCA+TGG 0.395246 tig0024643:-54230 None:intergenic
AGAATCCTTTCATACGCAAT+TGG 0.397759 tig0024643:+54983 Msa1418840:CDS
ACTCCTAATCTGGCACCTAC+TGG 0.397996 tig0024643:+56040 Msa1418840:CDS
TTCCAATTGCATCAAGCAGC+TGG 0.400845 tig0024643:-56544 None:intergenic
CATTTCTCCCTGCTGAATCC+TGG 0.401568 tig0024643:-56290 None:intergenic
ATAAAAGAGTTTCTAATACT+TGG 0.410108 tig0024643:-56677 None:intergenic
TCATATAGTTGTAAATGATT+GGG 0.417919 tig0024643:+55961 Msa1418840:CDS
TAGTGTACTTACTCCTAATC+TGG 0.419014 tig0024643:+56030 Msa1418840:CDS
AACTGAACCATTTGAGTTGT+GGG 0.419173 tig0024643:+56093 Msa1418840:CDS
CAGGGTATACGCAGCGATCT+AGG 0.420176 tig0024643:+55932 Msa1418840:intron
TCCGGTCCATCATTATTCTC+TGG 0.421373 tig0024643:+54553 Msa1418840:CDS
ATTGTGATTGGGAGTGGTAT+TGG 0.424946 tig0024643:+54412 Msa1418840:CDS
GTCATAGTAATGGGAGGATT+AGG 0.428264 tig0024643:+54329 Msa1418840:CDS
GTTGTAAATGATTGGGAAAG+AGG 0.432129 tig0024643:+55968 Msa1418840:CDS
TCACACATCAAAGGTTTCTT+CGG 0.434054 tig0024643:+56339 Msa1418840:CDS
GTACGAGGACTAGAGAAGTT+TGG 0.436491 tig0024643:+55518 Msa1418840:CDS
ATCATCATAGTCATAGTAAT+GGG 0.437707 tig0024643:+54320 Msa1418840:CDS
CGTGACAAGAAATCAGCTTC+AGG 0.438051 tig0024643:-54679 None:intergenic
AAATCTCCTCGAACAGATAG+AGG 0.446661 tig0024643:-54823 None:intergenic
AAATGTGAAGTGAAGTTAGT+TGG 0.458953 tig0024643:+56308 Msa1418840:CDS
ACTTTGGAACAACTTCTTGA+GGG 0.464503 tig0024643:-55759 None:intergenic
GCACCACTGGCAGCAACTGC+AGG 0.466053 tig0024643:-56482 None:intergenic
TCTGTACCAGCTTGTATAGC+TGG 0.473355 tig0024643:-56383 None:intergenic
CAGTGGGACCAGGATTCAGC+AGG 0.478022 tig0024643:+56282 Msa1418840:CDS
AGGTTTACATGTTTGCAGAA+TGG 0.481167 tig0024643:+55432 Msa1418840:intron
CTCTTATTGTCTAACCGTAA+AGG 0.481489 tig0024643:+56787 Msa1418840:three_prime_UTR
ACCGGAGAAAGCATTAGTTT+AGG 0.482794 tig0024643:+54066 None:intergenic
AAAGGCTATAAGTTTGATTC+CGG 0.484501 tig0024643:+54535 Msa1418840:CDS
GATTAGGAAAGGTGGGGTTG+TGG 0.485581 tig0024643:+54345 Msa1418840:CDS
ATTCCACACCTTTATTGTTG+TGG 0.492890 tig0024643:+56431 Msa1418840:CDS
AAACAGATGTAATTGTGATT+GGG 0.492966 tig0024643:+54401 Msa1418840:CDS
ATATTGAAAGAAAGGAAATT+GGG 0.493766 tig0024643:+54107 Msa1418840:five_prime_UTR
CATCATCATAGTCATAGTAA+TGG 0.495952 tig0024643:+54319 Msa1418840:CDS
GTGGAGAGAGCAGTGGGACC+AGG 0.499060 tig0024643:+56272 Msa1418840:CDS
ATGGGAGGATTAGGAAAGGT+GGG 0.499467 tig0024643:+54338 Msa1418840:CDS
CAGCACCTCCAGCATGGTCG+TGG 0.499748 tig0024643:-54495 None:intergenic
CGGAGGAACAGAGGAACATA+TGG 0.499814 tig0024643:+56359 Msa1418840:CDS
AGTCCTTCCCACAACTCAAA+TGG 0.501774 tig0024643:-56100 None:intergenic
CAATACCTGCAGCTCCATCA+AGG 0.503593 tig0024643:-55484 None:intergenic
TCCCTTGTCTACAGCTGCAA+TGG 0.505505 tig0024643:+54792 Msa1418840:CDS
AGAAATCAGCTTCAGGTACA+TGG 0.506854 tig0024643:-54672 None:intergenic
CTCCTAATCTGGCACCTACT+GGG 0.508705 tig0024643:+56041 Msa1418840:CDS
GCTTCTCAGCTTCACTCCAA+TGG 0.509152 tig0024643:-55597 None:intergenic
GTTTCTAATACTTGGTAGAT+GGG 0.509848 tig0024643:-56669 None:intergenic
CCTCAGCATCAAATCCCAAA+TGG 0.511011 tig0024643:-55834 None:intergenic
CCATGAATCATAAGTAGCGC+AGG 0.513899 tig0024643:-54644 None:intergenic
GACGCCAATGCCAGGAAAAG+TGG 0.514468 tig0024643:-56459 None:intergenic
TAGTATATTGTCTGCAGAGA+TGG 0.518916 tig0024643:+55047 Msa1418840:CDS
ATTCATGGCATGGCATGGCA+TGG 0.522894 tig0024643:-54215 None:intergenic
TTCCCAGTAGGTGCCAGATT+AGG 0.527245 tig0024643:-56043 None:intergenic
ACCAGAGAATAATGATGGAC+CGG 0.531175 tig0024643:-54554 None:intergenic
GAACTGAACCATTTGAGTTG+TGG 0.531241 tig0024643:+56092 Msa1418840:CDS
ATTAGCTACAATTGCACCAC+TGG 0.535074 tig0024643:-56495 None:intergenic
GACTTTGGAACAACTTCTTG+AGG 0.536940 tig0024643:-55760 None:intergenic
GTCCTGAAGCTGTTCAAGAA+TGG 0.537122 tig0024643:+54746 Msa1418840:CDS
TCAATCCAATTGCGTATGAA+AGG 0.537955 tig0024643:-54988 None:intergenic
TGCAAACCAGAGAATAATGA+TGG 0.543994 tig0024643:-54559 None:intergenic
TTCGAAAGCCACGACCATGC+TGG 0.544052 tig0024643:+54487 Msa1418840:CDS
TTCTCTGGTTTGCAGTCAAG+AGG 0.544317 tig0024643:+54568 Msa1418840:CDS
CACCAAATCAAATATTATGT+TGG 0.545046 tig0024643:-54184 None:intergenic
AAGGACCTTCACAACTATGC+AGG 0.545742 tig0024643:+54724 Msa1418840:CDS
TGAAAGAAAGGAAATTGGGT+AGG 0.546300 tig0024643:+54111 Msa1418840:five_prime_UTR
CCCTCATCGCATTCATGGCA+TGG 0.553831 tig0024643:-54225 None:intergenic
GACGTGGCTAAACTGAAGAC+AGG 0.554783 tig0024643:+54139 Msa1418840:five_prime_UTR
CGCTACTTATGATTCATGGA+TGG 0.556127 tig0024643:+54648 Msa1418840:CDS
GTCCCTGCAGTTGCTGCCAG+TGG 0.557851 tig0024643:+56479 Msa1418840:CDS
AGCCATTGCAGCTGTAGACA+AGG 0.561564 tig0024643:-54794 None:intergenic
CCATGCCATGAATGCGATGA+GGG 0.562349 tig0024643:+54225 Msa1418840:CDS
AATACCTGCAGCTCCATCAA+GGG 0.564396 tig0024643:-55483 None:intergenic
TCCAATTGCATCAAGCAGCT+GGG 0.566641 tig0024643:-56543 None:intergenic
TTCATGGCATGGCATGGCAT+GGG 0.566917 tig0024643:-54214 None:intergenic
GTGATTGGGAGTGGTATTGG+TGG 0.570399 tig0024643:+54415 Msa1418840:CDS
GAAAGAAAGGAAATTGGGTA+GGG 0.570727 tig0024643:+54112 Msa1418840:five_prime_UTR
GCATCAAGAACTTGAGCAAG+AGG 0.572179 tig0024643:-54604 None:intergenic
ATCGCATTCATGGCATGGCA+TGG 0.573566 tig0024643:-54220 None:intergenic
GTTGAAAATGACAGAGCCAT+TGG 0.574831 tig0024643:+55581 Msa1418840:CDS
CCATTTGGGATTTGATGCTG+AGG 0.576837 tig0024643:+55834 Msa1418840:CDS
TTTGCAGTCAAGAGGTCCAC+AGG 0.577098 tig0024643:+54576 Msa1418840:CDS
CACATCAAAGGTTTCTTCGG+AGG 0.578196 tig0024643:+56342 Msa1418840:CDS
CAGGACCTGCATAGTTGTGA+AGG 0.579792 tig0024643:-54729 None:intergenic
AGAGCAGTGGAGAGAGCAGT+GGG 0.579813 tig0024643:+56266 Msa1418840:CDS
GAAGTCCACTCACACATCAA+AGG 0.579934 tig0024643:+56330 Msa1418840:CDS
GCAGTTCGTACATGCCAAGA+AGG 0.580617 tig0024643:+55693 Msa1418840:intron
GAGAGCAGTGGAGAGAGCAG+TGG 0.581460 tig0024643:+56265 Msa1418840:CDS
ATCATAAGTAGCGCAGGGGA+CGG 0.583077 tig0024643:-54638 None:intergenic
ACTGAGTTGTGCAGCACTGT+TGG 0.584888 tig0024643:+54438 Msa1418840:CDS
AATGGGAGGATTAGGAAAGG+TGG 0.589689 tig0024643:+54337 Msa1418840:CDS
GCCATTGCAGCTGTAGACAA+GGG 0.590322 tig0024643:-54793 None:intergenic
CGAGGACTAGAGAAGTTTGG+TGG 0.591605 tig0024643:+55521 Msa1418840:CDS
CAAACAACAAATAGATAATG+TGG 0.592493 tig0024643:+56243 Msa1418840:intron
GATGTAATTGTGATTGGGAG+TGG 0.593011 tig0024643:+54406 Msa1418840:CDS
AATCTCCTCGAACAGATAGA+GGG 0.593766 tig0024643:-54822 None:intergenic
AGATTAGGAGTAAGTACACT+AGG 0.595451 tig0024643:-56028 None:intergenic
GCTGATTTCTTGTCACGCAT+AGG 0.597690 tig0024643:+54685 Msa1418840:CDS
CACCACTGGCAGCAACTGCA+GGG 0.605933 tig0024643:-56481 None:intergenic
TGGAGTTGAATGTCCAGGAA+AGG 0.606615 tig0024643:-56408 None:intergenic
AATACTTGGTAGATGGGCAA+AGG 0.607524 tig0024643:-56663 None:intergenic
CATGAATCATAAGTAGCGCA+GGG 0.607675 tig0024643:-54643 None:intergenic
GAACCATTTGAGTTGTGGGA+AGG 0.609081 tig0024643:+56097 Msa1418840:CDS
TTTGCAGAATGGTACAAACC+AGG 0.612324 tig0024643:+55443 Msa1418840:CDS
TATGGACCAGCTATACAAGC+TGG 0.613740 tig0024643:+56377 Msa1418840:CDS
GTGTGAGAATTGCATCATGC+GGG 0.614927 tig0024643:-56576 None:intergenic
TTGCAGAATGGTACAAACCA+GGG 0.620272 tig0024643:+55444 Msa1418840:CDS
ATAGATAATGTGGAGAGCAG+TGG 0.622582 tig0024643:+56253 Msa1418840:intron
GGAATTGGAGTTGAATGTCC+AGG 0.624562 tig0024643:-56413 None:intergenic
AGTAATGGGAGGATTAGGAA+AGG 0.625364 tig0024643:+54334 Msa1418840:CDS
AGGTTTCTTCGGAGGAACAG+AGG 0.626999 tig0024643:+56350 Msa1418840:CDS
GACTAGAGAAGTTTGGTGGG+CGG 0.629357 tig0024643:+55525 Msa1418840:CDS
ATTGTTGATGCTCTTGTACG+AGG 0.629566 tig0024643:+55503 Msa1418840:CDS
CATCAAGAACTTGAGCAAGA+GGG 0.633604 tig0024643:-54603 None:intergenic
ATTGGAGTGAAGCTGAGAAG+CGG 0.638801 tig0024643:+55599 Msa1418840:CDS
GCGATGAGGGGTGTAAGTGT+TGG 0.638850 tig0024643:+54238 Msa1418840:CDS
AATGAGCAGCACCTCCAGCA+TGG 0.642493 tig0024643:-54501 None:intergenic
ATACCTGCAGCTCCATCAAG+GGG 0.643456 tig0024643:-55482 None:intergenic
TCTTAAAGCTCAAAGATCAG+AGG 0.643901 tig0024643:+56150 Msa1418840:CDS
TGCAGAATGGTACAAACCAG+GGG 0.644445 tig0024643:+55445 Msa1418840:CDS
ATCTCCTCGAACAGATAGAG+GGG 0.646167 tig0024643:-54821 None:intergenic
ATCATAGTCATAGTAATGGG+AGG 0.651087 tig0024643:+54323 Msa1418840:CDS
AAAAGGTGAGAGAAGTTGTG+TGG 0.652152 tig0024643:-54932 None:intergenic
TGTAACACATGTTTCCCAGT+AGG 0.652977 tig0024643:-56055 None:intergenic
TGAGCAAGAGGGTTAGCCTG+TGG 0.654171 tig0024643:-54592 None:intergenic
GATTTCTCTTCAAAGTCACG+TGG 0.656256 tig0024643:+55547 Msa1418840:CDS
GAGGACTAGAGAAGTTTGGT+GGG 0.661720 tig0024643:+55522 Msa1418840:CDS
TCTCCACAACAATAAAGGTG+TGG 0.665845 tig0024643:-56434 None:intergenic
AGAAACCTTTGATGTGTGAG+TGG 0.673422 tig0024643:-56335 None:intergenic
AGGTGCATATCTAGCAGCAG+CGG 0.676346 tig0024643:-54860 None:intergenic
GAAAGCCACGACCATGCTGG+AGG 0.682926 tig0024643:+54490 Msa1418840:CDS
TGGGAGGATTAGGAAAGGTG+GGG 0.683293 tig0024643:+54339 Msa1418840:CDS
AGTGGGACCAGGATTCAGCA+GGG 0.693423 tig0024643:+56283 Msa1418840:CDS
TGTGTGAGAATTGCATCATG+CGG 0.698234 tig0024643:-56577 None:intergenic
TGTGAGCAATGCATCAATGT+GGG 0.699079 tig0024643:+55720 Msa1418840:CDS
TTGTGAGCAATGCATCAATG+TGG 0.700183 tig0024643:+55719 Msa1418840:CDS
GCCATGCCATGAATGCGATG+AGG 0.701444 tig0024643:+54224 Msa1418840:CDS
TCTCCTCGAACAGATAGAGG+GGG 0.703760 tig0024643:-54820 None:intergenic
GTGGAACGAAGAGCAGCCTG+AGG 0.714071 tig0024643:-54913 None:intergenic
ATGAATCATAAGTAGCGCAG+GGG 0.721253 tig0024643:-54642 None:intergenic
CATGCCATGAATGCGATGAG+GGG 0.728710 tig0024643:+54226 Msa1418840:CDS
GCAGAATGGTACAAACCAGG+GGG 0.746992 tig0024643:+55446 Msa1418840:CDS
TACCTGCAGCTCCATCAAGG+GGG 0.749948 tig0024643:-55481 None:intergenic
AATTGGGTAGGGTAGTGACG+TGG 0.751723 tig0024643:+54123 Msa1418840:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTTAAGAAATGAAAT+TGG - tig0024643:55296-55315 None:intergenic 15.0%
!! TCAAAATTAATATACTTACT+TGG - tig0024643:55625-55644 None:intergenic 15.0%
!!! TCATATTTTGTATATATACA+TGG + tig0024643:56762-56781 Msa1418840:three_prime_UTR 15.0%
!! ATATTGAAAGAAAGGAAATT+GGG + tig0024643:54107-54126 Msa1418840:five_prime_UTR 20.0%
!!! ATAATATTTGATTTGGTGTT+TGG + tig0024643:54189-54208 Msa1418840:five_prime_UTR 20.0%
!! ATAACACATAAATCTCTAAA+GGG + tig0024643:55213-55232 Msa1418840:intron 20.0%
!! ATCATATAGTTGTAAATGAT+TGG + tig0024643:55960-55979 Msa1418840:CDS 20.0%
!! TCATATAGTTGTAAATGATT+GGG + tig0024643:55961-55980 Msa1418840:CDS 20.0%
!! AATAGTACATAAACTTTGTA+TGG + tig0024643:56603-56622 Msa1418840:three_prime_UTR 20.0%
!! ATAAAAGAGTTTCTAATACT+TGG - tig0024643:56680-56699 None:intergenic 20.0%
!! GTTCATCAAAAATAAATGTT+AGG - tig0024643:56730-56749 None:intergenic 20.0%
! GATATTGAAAGAAAGGAAAT+TGG + tig0024643:54106-54125 Msa1418840:five_prime_UTR 25.0%
! CACCAACATAATATTTGATT+TGG + tig0024643:54182-54201 Msa1418840:five_prime_UTR 25.0%
! CACCAAATCAAATATTATGT+TGG - tig0024643:54187-54206 None:intergenic 25.0%
! ATCATCATAGTCATAGTAAT+GGG + tig0024643:54320-54339 Msa1418840:CDS 25.0%
! AAACAGATGTAATTGTGATT+GGG + tig0024643:54401-54420 Msa1418840:CDS 25.0%
!!! AAAAAGGTATTGAAAAGAGA+AGG - tig0024643:54883-54902 None:intergenic 25.0%
!! TTTCAATACCTTTTTCCAAA+TGG + tig0024643:54888-54907 Msa1418840:CDS 25.0%
!! TTCAATACCTTTTTCCAAAT+GGG + tig0024643:54889-54908 Msa1418840:CDS 25.0%
! CATAACACATAAATCTCTAA+AGG + tig0024643:55212-55231 Msa1418840:intron 25.0%
!!! AGCTTTAAGATTTCTGTATT+CGG - tig0024643:56140-56159 None:intergenic 25.0%
! CAAACAACAAATAGATAATG+TGG + tig0024643:56243-56262 Msa1418840:intron 25.0%
CATCATCATAGTCATAGTAA+TGG + tig0024643:54319-54338 Msa1418840:CDS 30.0%
GAAACAGATGTAATTGTGAT+TGG + tig0024643:54400-54419 Msa1418840:CDS 30.0%
AAAGGCTATAAGTTTGATTC+CGG + tig0024643:54535-54554 Msa1418840:CDS 30.0%
TTGCAAAGAGTCAAGTATTT+GGG - tig0024643:54959-54978 None:intergenic 30.0%
AGGATAGAAACTAGTTATTG+TGG - tig0024643:55154-55173 None:intergenic 30.0%
TTCCAAAGTCTTACTCAAAT+AGG + tig0024643:55773-55792 Msa1418840:CDS 30.0%
ATCCTATTTGAGTAAGACTT+TGG - tig0024643:55778-55797 None:intergenic 30.0%
AAATGTGAAGTGAAGTTAGT+TGG + tig0024643:56308-56327 Msa1418840:CDS 30.0%
GTTTCTAATACTTGGTAGAT+GGG - tig0024643:56672-56691 None:intergenic 30.0%
AGTTTCTAATACTTGGTAGA+TGG - tig0024643:56673-56692 None:intergenic 30.0%
! TTAGGTGAATGTTTTCGAAG+AGG + tig0024643:54084-54103 Msa1418840:five_prime_UTR 35.0%
CGAAGAGGATATTGAAAGAA+AGG + tig0024643:54099-54118 Msa1418840:five_prime_UTR 35.0%
TGAAAGAAAGGAAATTGGGT+AGG + tig0024643:54111-54130 Msa1418840:five_prime_UTR 35.0%
GAAAGAAAGGAAATTGGGTA+GGG + tig0024643:54112-54131 Msa1418840:five_prime_UTR 35.0%
CTCACTCTCATTACATTACA+AGG - tig0024643:54271-54290 None:intergenic 35.0%
! ATCATAGTCATAGTAATGGG+AGG + tig0024643:54323-54342 Msa1418840:CDS 35.0%
! GCTCATTCTTTTGATGTCAA+AGG + tig0024643:54517-54536 Msa1418840:CDS 35.0%
TGCAAACCAGAGAATAATGA+TGG - tig0024643:54562-54581 None:intergenic 35.0%
! AGGTCCTACTGAGTTTTTAA+AGG + tig0024643:54705-54724 Msa1418840:CDS 35.0%
! AGGTCCTTTAAAAACTCAGT+AGG - tig0024643:54712-54731 None:intergenic 35.0%
GAGTCAAGTATTTGGGAAAA+AGG - tig0024643:54952-54971 None:intergenic 35.0%
GTTGCAAAGAGTCAAGTATT+TGG - tig0024643:54960-54979 None:intergenic 35.0%
AGAATCCTTTCATACGCAAT+TGG + tig0024643:54983-55002 Msa1418840:CDS 35.0%
TCAATCCAATTGCGTATGAA+AGG - tig0024643:54991-55010 None:intergenic 35.0%
TTACTTTCTTTCTTGCTTGC+TGG + tig0024643:55012-55031 Msa1418840:CDS 35.0%
TAGTATATTGTCTGCAGAGA+TGG + tig0024643:55047-55066 Msa1418840:CDS 35.0%
TCTGCACAAAAAAATGAGAG+AGG - tig0024643:55174-55193 None:intergenic 35.0%
ACTGTCTCTAAGTAAACAAC+AGG - tig0024643:55259-55278 None:intergenic 35.0%
ACCTAAAAGCAGCAGTTAAA+TGG + tig0024643:55315-55334 Msa1418840:intron 35.0%
!!! TCCATTTAACTGCTGCTTTT+AGG - tig0024643:55319-55338 None:intergenic 35.0%
GAAAACTAACGAAATAGTGC+TGG + tig0024643:55341-55360 Msa1418840:intron 35.0%
AGGTTTACATGTTTGCAGAA+TGG + tig0024643:55432-55451 Msa1418840:intron 35.0%
!! ACTTTGGAACAACTTCTTGA+GGG - tig0024643:55762-55781 None:intergenic 35.0%
ATCTTTCATGCATCTCCATT+TGG + tig0024643:55819-55838 Msa1418840:CDS 35.0%
TCTTTCATGCATCTCCATTT+GGG + tig0024643:55820-55839 Msa1418840:CDS 35.0%
GAATACTTCAAACAGATGCA+TGG - tig0024643:55899-55918 None:intergenic 35.0%
GTTGTAAATGATTGGGAAAG+AGG + tig0024643:55968-55987 Msa1418840:CDS 35.0%
AGATTAGGAGTAAGTACACT+AGG - tig0024643:56031-56050 None:intergenic 35.0%
TAGTGTACTTACTCCTAATC+TGG + tig0024643:56030-56049 Msa1418840:CDS 35.0%
!! AACTGAACCATTTGAGTTGT+GGG + tig0024643:56093-56112 Msa1418840:CDS 35.0%
TCTTAAAGCTCAAAGATCAG+AGG + tig0024643:56150-56169 Msa1418840:CDS 35.0%
TCACACATCAAAGGTTTCTT+CGG + tig0024643:56339-56358 Msa1418840:CDS 35.0%
! CAACAATAAAGGTGTGGAAT+TGG - tig0024643:56431-56450 None:intergenic 35.0%
ATTCCACACCTTTATTGTTG+TGG + tig0024643:56431-56450 Msa1418840:CDS 35.0%
CTCTTATTGTCTAACCGTAA+AGG + tig0024643:56787-56806 Msa1418840:three_prime_UTR 35.0%
! GTCATAGTAATGGGAGGATT+AGG + tig0024643:54329-54348 Msa1418840:CDS 40.0%
! AGTAATGGGAGGATTAGGAA+AGG + tig0024643:54334-54353 Msa1418840:CDS 40.0%
GATGTAATTGTGATTGGGAG+TGG + tig0024643:54406-54425 Msa1418840:CDS 40.0%
ATTGTGATTGGGAGTGGTAT+TGG + tig0024643:54412-54431 Msa1418840:CDS 40.0%
!! ACCAGAGAATAATGATGGAC+CGG - tig0024643:54557-54576 None:intergenic 40.0%
CATCAAGAACTTGAGCAAGA+GGG - tig0024643:54606-54625 None:intergenic 40.0%
TGCTCAAGTTCTTGATGCTT+TGG + tig0024643:54609-54628 Msa1418840:CDS 40.0%
GCTCAAGTTCTTGATGCTTT+GGG + tig0024643:54610-54629 Msa1418840:CDS 40.0%
ATGAATCATAAGTAGCGCAG+GGG - tig0024643:54645-54664 None:intergenic 40.0%
CATGAATCATAAGTAGCGCA+GGG - tig0024643:54646-54665 None:intergenic 40.0%
CGCTACTTATGATTCATGGA+TGG + tig0024643:54648-54667 Msa1418840:CDS 40.0%
AGAAATCAGCTTCAGGTACA+TGG - tig0024643:54675-54694 None:intergenic 40.0%
! TCAAGAATGGCAGAAGCTTT+TGG + tig0024643:54759-54778 Msa1418840:CDS 40.0%
AATCTCCTCGAACAGATAGA+GGG - tig0024643:54825-54844 None:intergenic 40.0%
AAATCTCCTCGAACAGATAG+AGG - tig0024643:54826-54845 None:intergenic 40.0%
CTATCTGTTCGAGGAGATTT+CGG + tig0024643:54826-54845 Msa1418840:CDS 40.0%
AAAAGGTGAGAGAAGTTGTG+TGG - tig0024643:54935-54954 None:intergenic 40.0%
!! TGATGAGTGGTAATGGCAAT+TGG - tig0024643:55092-55111 None:intergenic 40.0%
! AATGATTGCACGTTGATGAG+TGG - tig0024643:55105-55124 None:intergenic 40.0%
AACATGTAAACCTGAGGGAA+GGG - tig0024643:55425-55444 None:intergenic 40.0%
AAACATGTAAACCTGAGGGA+AGG - tig0024643:55426-55445 None:intergenic 40.0%
CTGCAAACATGTAAACCTGA+GGG - tig0024643:55430-55449 None:intergenic 40.0%
TCTGCAAACATGTAAACCTG+AGG - tig0024643:55431-55450 None:intergenic 40.0%
TTTGCAGAATGGTACAAACC+AGG + tig0024643:55443-55462 Msa1418840:CDS 40.0%
TTGCAGAATGGTACAAACCA+GGG + tig0024643:55444-55463 Msa1418840:CDS 40.0%
ATTGTTGATGCTCTTGTACG+AGG + tig0024643:55503-55522 Msa1418840:CDS 40.0%
GATTTCTCTTCAAAGTCACG+TGG + tig0024643:55547-55566 Msa1418840:CDS 40.0%
GTTGAAAATGACAGAGCCAT+TGG + tig0024643:55581-55600 Msa1418840:CDS 40.0%
TTGTGAGCAATGCATCAATG+TGG + tig0024643:55719-55738 Msa1418840:CDS 40.0%
TGTGAGCAATGCATCAATGT+GGG + tig0024643:55720-55739 Msa1418840:CDS 40.0%
!! GACTTTGGAACAACTTCTTG+AGG - tig0024643:55763-55782 None:intergenic 40.0%
TATTCAACATCGAGTGAGCA+GGG + tig0024643:55914-55933 Msa1418840:intron 40.0%
TGTAACACATGTTTCCCAGT+AGG - tig0024643:56058-56077 None:intergenic 40.0%
GTGTTACATGCTTATCTTCC+AGG + tig0024643:56070-56089 Msa1418840:CDS 40.0%
AACTCAAATGGTTCAGTTCC+TGG - tig0024643:56091-56110 None:intergenic 40.0%
!! GAACTGAACCATTTGAGTTG+TGG + tig0024643:56092-56111 Msa1418840:CDS 40.0%
ATAGATAATGTGGAGAGCAG+TGG + tig0024643:56253-56272 Msa1418840:intron 40.0%
AGAAACCTTTGATGTGTGAG+TGG - tig0024643:56338-56357 None:intergenic 40.0%
TCTCCACAACAATAAAGGTG+TGG - tig0024643:56437-56456 None:intergenic 40.0%
TGGAGTCTCCACAACAATAA+AGG - tig0024643:56442-56461 None:intergenic 40.0%
ATTAGCTACAATTGCACCAC+TGG - tig0024643:56498-56517 None:intergenic 40.0%
TGTGTGAGAATTGCATCATG+CGG - tig0024643:56580-56599 None:intergenic 40.0%
AATACTTGGTAGATGGGCAA+AGG - tig0024643:56666-56685 None:intergenic 40.0%
! CATTTTCATGCTCGCCTTTA+CGG - tig0024643:56804-56823 None:intergenic 40.0%
AATGGGAGGATTAGGAAAGG+TGG + tig0024643:54337-54356 Msa1418840:CDS 45.0%
ATGGGAGGATTAGGAAAGGT+GGG + tig0024643:54338-54357 Msa1418840:CDS 45.0%
TCCGGTCCATCATTATTCTC+TGG + tig0024643:54553-54572 Msa1418840:CDS 45.0%
! TTCTCTGGTTTGCAGTCAAG+AGG + tig0024643:54568-54587 Msa1418840:CDS 45.0%
GCATCAAGAACTTGAGCAAG+AGG - tig0024643:54607-54626 None:intergenic 45.0%
CCATGAATCATAAGTAGCGC+AGG - tig0024643:54647-54666 None:intergenic 45.0%
CCTGCGCTACTTATGATTCA+TGG + tig0024643:54644-54663 Msa1418840:CDS 45.0%
CGTGACAAGAAATCAGCTTC+AGG - tig0024643:54682-54701 None:intergenic 45.0%
! GCTGATTTCTTGTCACGCAT+AGG + tig0024643:54685-54704 Msa1418840:CDS 45.0%
AAGGACCTTCACAACTATGC+AGG + tig0024643:54724-54743 Msa1418840:CDS 45.0%
GTCCTGAAGCTGTTCAAGAA+TGG + tig0024643:54746-54765 Msa1418840:CDS 45.0%
TGCCATTCTTGAACAGCTTC+AGG - tig0024643:54751-54770 None:intergenic 45.0%
ATCTCCTCGAACAGATAGAG+GGG - tig0024643:54824-54843 None:intergenic 45.0%
CTGAGGACCCATTTGGAAAA+AGG - tig0024643:54899-54918 None:intergenic 45.0%
! CTTTTTCCAAATGGGTCCTC+AGG + tig0024643:54897-54916 Msa1418840:CDS 45.0%
! TGCACGTTGATGAGTGGTAA+TGG - tig0024643:55099-55118 None:intergenic 45.0%
TGCAGAATGGTACAAACCAG+GGG + tig0024643:55445-55464 Msa1418840:CDS 45.0%
AATACCTGCAGCTCCATCAA+GGG - tig0024643:55486-55505 None:intergenic 45.0%
GTACGAGGACTAGAGAAGTT+TGG + tig0024643:55518-55537 Msa1418840:CDS 45.0%
GAGGACTAGAGAAGTTTGGT+GGG + tig0024643:55522-55541 Msa1418840:CDS 45.0%
ATTGGAGTGAAGCTGAGAAG+CGG + tig0024643:55599-55618 Msa1418840:CDS 45.0%
ATTGCTCACAACAGCCTTCT+TGG - tig0024643:55710-55729 None:intergenic 45.0%
CCTCAGCATCAAATCCCAAA+TGG - tig0024643:55837-55856 None:intergenic 45.0%
! CCATTTGGGATTTGATGCTG+AGG + tig0024643:55834-55853 Msa1418840:CDS 45.0%
! TTGATGCTGAGGTGAGGTTT+TGG + tig0024643:55845-55864 Msa1418840:intron 45.0%
GTATTCAACATCGAGTGAGC+AGG + tig0024643:55913-55932 Msa1418840:intron 45.0%
!! GAACCATTTGAGTTGTGGGA+AGG + tig0024643:56097-56116 Msa1418840:CDS 45.0%
AGTCCTTCCCACAACTCAAA+TGG - tig0024643:56103-56122 None:intergenic 45.0%
GAAGTCCACTCACACATCAA+AGG + tig0024643:56330-56349 Msa1418840:CDS 45.0%
CACATCAAAGGTTTCTTCGG+AGG + tig0024643:56342-56361 Msa1418840:CDS 45.0%
TATGGACCAGCTATACAAGC+TGG + tig0024643:56377-56396 Msa1418840:CDS 45.0%
TCTGTACCAGCTTGTATAGC+TGG - tig0024643:56386-56405 None:intergenic 45.0%
TGGAGTTGAATGTCCAGGAA+AGG - tig0024643:56411-56430 None:intergenic 45.0%
GGAATTGGAGTTGAATGTCC+AGG - tig0024643:56416-56435 None:intergenic 45.0%
TCCAATTGCATCAAGCAGCT+GGG - tig0024643:56546-56565 None:intergenic 45.0%
TTCCAATTGCATCAAGCAGC+TGG - tig0024643:56547-56566 None:intergenic 45.0%
GTGTGAGAATTGCATCATGC+GGG - tig0024643:56579-56598 None:intergenic 45.0%
AATTGGGTAGGGTAGTGACG+TGG + tig0024643:54123-54142 Msa1418840:five_prime_UTR 50.0%
GACGTGGCTAAACTGAAGAC+AGG + tig0024643:54139-54158 Msa1418840:five_prime_UTR 50.0%
TTCATGGCATGGCATGGCAT+GGG - tig0024643:54217-54236 None:intergenic 50.0%
ATTCATGGCATGGCATGGCA+TGG - tig0024643:54218-54237 None:intergenic 50.0%
ATCGCATTCATGGCATGGCA+TGG - tig0024643:54223-54242 None:intergenic 50.0%
CCATGCCATGAATGCGATGA+GGG + tig0024643:54225-54244 Msa1418840:CDS 50.0%
CATGCCATGAATGCGATGAG+GGG + tig0024643:54226-54245 Msa1418840:CDS 50.0%
TACACCCCTCATCGCATTCA+TGG - tig0024643:54233-54252 None:intergenic 50.0%
TGGGAGGATTAGGAAAGGTG+GGG + tig0024643:54339-54358 Msa1418840:CDS 50.0%
GATTAGGAAAGGTGGGGTTG+TGG + tig0024643:54345-54364 Msa1418840:CDS 50.0%
! GTGATTGGGAGTGGTATTGG+TGG + tig0024643:54415-54434 Msa1418840:CDS 50.0%
ACTGAGTTGTGCAGCACTGT+TGG + tig0024643:54438-54457 Msa1418840:CDS 50.0%
TTTGCAGTCAAGAGGTCCAC+AGG + tig0024643:54576-54595 Msa1418840:CDS 50.0%
ATCATAAGTAGCGCAGGGGA+CGG - tig0024643:54641-54660 None:intergenic 50.0%
CAGGACCTGCATAGTTGTGA+AGG - tig0024643:54732-54751 None:intergenic 50.0%
TCCCTTGTCTACAGCTGCAA+TGG + tig0024643:54792-54811 Msa1418840:CDS 50.0%
GCCATTGCAGCTGTAGACAA+GGG - tig0024643:54796-54815 None:intergenic 50.0%
AGCCATTGCAGCTGTAGACA+AGG - tig0024643:54797-54816 None:intergenic 50.0%
TCTCCTCGAACAGATAGAGG+GGG - tig0024643:54823-54842 None:intergenic 50.0%
AGGTGCATATCTAGCAGCAG+CGG - tig0024643:54863-54882 None:intergenic 50.0%
GCAGAATGGTACAAACCAGG+GGG + tig0024643:55446-55465 Msa1418840:CDS 50.0%
TGTCTTGAGTACCCCCTTGA+TGG + tig0024643:55470-55489 Msa1418840:CDS 50.0%
ATACCTGCAGCTCCATCAAG+GGG - tig0024643:55485-55504 None:intergenic 50.0%
CAATACCTGCAGCTCCATCA+AGG - tig0024643:55487-55506 None:intergenic 50.0%
CGAGGACTAGAGAAGTTTGG+TGG + tig0024643:55521-55540 Msa1418840:CDS 50.0%
! GACTAGAGAAGTTTGGTGGG+CGG + tig0024643:55525-55544 Msa1418840:CDS 50.0%
GCTTCTCAGCTTCACTCCAA+TGG - tig0024643:55600-55619 None:intergenic 50.0%
GCAGTTCGTACATGCCAAGA+AGG + tig0024643:55693-55712 Msa1418840:intron 50.0%
TGGGATTTGATGCTGAGGTG+AGG + tig0024643:55839-55858 Msa1418840:intron 50.0%
ACTCCTAATCTGGCACCTAC+TGG + tig0024643:56040-56059 Msa1418840:CDS 50.0%
CTCCTAATCTGGCACCTACT+GGG + tig0024643:56041-56060 Msa1418840:CDS 50.0%
TTCCCAGTAGGTGCCAGATT+AGG - tig0024643:56046-56065 None:intergenic 50.0%
CATTTCTCCCTGCTGAATCC+TGG - tig0024643:56293-56312 None:intergenic 50.0%
AGGTTTCTTCGGAGGAACAG+AGG + tig0024643:56350-56369 Msa1418840:CDS 50.0%
CGGAGGAACAGAGGAACATA+TGG + tig0024643:56359-56378 Msa1418840:CDS 50.0%
GCTGGTACAGATACCTTTCC+TGG + tig0024643:56395-56414 Msa1418840:CDS 50.0%
!! TGTGGAGACTCCACTTTTCC+TGG + tig0024643:56449-56468 Msa1418840:CDS 50.0%
!! GACTCCACTTTTCCTGGCAT+TGG + tig0024643:56455-56474 Msa1418840:CDS 50.0%
TCCCAGCTGCTTGATGCAAT+TGG + tig0024643:56542-56561 Msa1418840:CDS 50.0%
GCCATGCCATGAATGCGATG+AGG + tig0024643:54224-54243 Msa1418840:CDS 55.0%
CCCTCATCGCATTCATGGCA+TGG - tig0024643:54228-54247 None:intergenic 55.0%
! GCGATGAGGGGTGTAAGTGT+TGG + tig0024643:54238-54257 Msa1418840:CDS 55.0%
TTCGAAAGCCACGACCATGC+TGG + tig0024643:54487-54506 Msa1418840:CDS 55.0%
AATGAGCAGCACCTCCAGCA+TGG - tig0024643:54504-54523 None:intergenic 55.0%
!! TGAGCAAGAGGGTTAGCCTG+TGG - tig0024643:54595-54614 None:intergenic 55.0%
CTTCCCCCTCTATCTGTTCG+AGG + tig0024643:54817-54836 Msa1418840:CDS 55.0%
TACCTGCAGCTCCATCAAGG+GGG - tig0024643:55484-55503 None:intergenic 55.0%
CAGGGTATACGCAGCGATCT+AGG + tig0024643:55932-55951 Msa1418840:intron 55.0%
AGAGCAGTGGAGAGAGCAGT+GGG + tig0024643:56266-56285 Msa1418840:CDS 55.0%
AGTGGGACCAGGATTCAGCA+GGG + tig0024643:56283-56302 Msa1418840:CDS 55.0%
GACGCCAATGCCAGGAAAAG+TGG - tig0024643:56462-56481 None:intergenic 55.0%
GAAAGCCACGACCATGCTGG+AGG + tig0024643:54490-54509 Msa1418840:CDS 60.0%
GAGCAGCCTGAGGACCCATT+TGG - tig0024643:54906-54925 None:intergenic 60.0%
GTGGAACGAAGAGCAGCCTG+AGG - tig0024643:54916-54935 None:intergenic 60.0%
CAGTTGCTCTCCCTTCCCTC+AGG + tig0024643:55412-55431 Msa1418840:intron 60.0%
TACCCCCTTGATGGAGCTGC+AGG + tig0024643:55479-55498 Msa1418840:CDS 60.0%
GAGAGCAGTGGAGAGAGCAG+TGG + tig0024643:56265-56284 Msa1418840:CDS 60.0%
CAGTGGGACCAGGATTCAGC+AGG + tig0024643:56282-56301 Msa1418840:CDS 60.0%
CACCACTGGCAGCAACTGCA+GGG - tig0024643:56484-56503 None:intergenic 60.0%
CAGCACCTCCAGCATGGTCG+TGG - tig0024643:54498-54517 None:intergenic 65.0%
GGGTACTCAAGACAGCCCCC+TGG - tig0024643:55464-55483 None:intergenic 65.0%
GTGGAGAGAGCAGTGGGACC+AGG + tig0024643:56272-56291 Msa1418840:CDS 65.0%
ACTGCAGGGACGCCAATGCC+AGG - tig0024643:56470-56489 None:intergenic 65.0%
GTCCCTGCAGTTGCTGCCAG+TGG + tig0024643:56479-56498 Msa1418840:CDS 65.0%
GCACCACTGGCAGCAACTGC+AGG - tig0024643:56485-56504 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0024643 gene 54072 56847 54072 ID=Msa1418840;Name=Msa1418840
tig0024643 mRNA 54072 56847 54072 ID=Msa1418840-mRNA-1;Parent=Msa1418840;Name=Msa1418840-mRNA-1;_AED=0.09;_eAED=0.09;_QI=145|1|1|1|0.8|0.66|6|255|584
tig0024643 exon 54072 55068 54072 ID=Msa1418840-mRNA-1:exon:532;Parent=Msa1418840-mRNA-1
tig0024643 exon 55434 55625 55434 ID=Msa1418840-mRNA-1:exon:533;Parent=Msa1418840-mRNA-1
tig0024643 exon 55697 55855 55697 ID=Msa1418840-mRNA-1:exon:534;Parent=Msa1418840-mRNA-1
tig0024643 exon 55935 56171 55935 ID=Msa1418840-mRNA-1:exon:535;Parent=Msa1418840-mRNA-1
tig0024643 exon 56257 56699 56257 ID=Msa1418840-mRNA-1:exon:536;Parent=Msa1418840-mRNA-1
tig0024643 exon 56721 56847 56721 ID=Msa1418840-mRNA-1:exon:537;Parent=Msa1418840-mRNA-1
tig0024643 five_prime_UTR 54072 54216 54072 ID=Msa1418840-mRNA-1:five_prime_utr;Parent=Msa1418840-mRNA-1
tig0024643 CDS 54217 55068 54217 ID=Msa1418840-mRNA-1:cds;Parent=Msa1418840-mRNA-1
tig0024643 CDS 55434 55625 55434 ID=Msa1418840-mRNA-1:cds;Parent=Msa1418840-mRNA-1
tig0024643 CDS 55697 55855 55697 ID=Msa1418840-mRNA-1:cds;Parent=Msa1418840-mRNA-1
tig0024643 CDS 55935 56171 55935 ID=Msa1418840-mRNA-1:cds;Parent=Msa1418840-mRNA-1
tig0024643 CDS 56257 56571 56257 ID=Msa1418840-mRNA-1:cds;Parent=Msa1418840-mRNA-1
tig0024643 three_prime_UTR 56572 56699 56572 ID=Msa1418840-mRNA-1:three_prime_utr;Parent=Msa1418840-mRNA-1
tig0024643 three_prime_UTR 56721 56847 56721 ID=Msa1418840-mRNA-1:three_prime_utr;Parent=Msa1418840-mRNA-1
Gene Sequence

>Msa1418840

ATGCCATGCCATGCCATGAATGCGATGAGGGGTGTAAGTGTTGGTGTGTTTCCTTGTAATGTAATGAGAGTGAGAAGATACTGTTCAAGAATTGATGATGATCATCATCATAGTCATAGTAATGGGAGGATTAGGAAAGGTGGGGTTGTGGTGCGAAACAGCAGCAACAAAGTAGATGAAACAGAAACAGATGTAATTGTGATTGGGAGTGGTATTGGTGGACTGAGTTGTGCAGCACTGTTGGCAAGATATGAACAAGATGTTGTCGTTTTCGAAAGCCACGACCATGCTGGAGGTGCTGCTCATTCTTTTGATGTCAAAGGCTATAAGTTTGATTCCGGTCCATCATTATTCTCTGGTTTGCAGTCAAGAGGTCCACAGGCTAACCCTCTTGCTCAAGTTCTTGATGCTTTGGGAGAGTCCGTCCCCTGCGCTACTTATGATTCATGGATGGTCCATGTACCTGAAGCTGATTTCTTGTCACGCATAGGTCCTACTGAGTTTTTAAAGGACCTTCACAACTATGCAGGTCCTGAAGCTGTTCAAGAATGGCAGAAGCTTTTGGATGCTGTACTTCCCTTGTCTACAGCTGCAATGGCTCTTCCCCCTCTATCTGTTCGAGGAGATTTCGGTGTTCTTTACACCGCTGCTGCTAGATATGCACCTTCTCTTTTCAATACCTTTTTCCAAATGGGTCCTCAGGCTGCTCTTCGTTCCACACAACTTCTCTCACCTTTTTCCCAAATACTTGACTCTTTGCAACTAAAGAATCCTTTCATACGCAATTGGATTGACTTACTTTCTTTCTTGCTTGCTGGTGTCAAATCTGATAGTATATTGTCTGCAGAGATGGTTTACATGTTTGCAGAATGGTACAAACCAGGGGGCTGTCTTGAGTACCCCCTTGATGGAGCTGCAGGTATTGTTGATGCTCTTGTACGAGGACTAGAGAAGTTTGGTGGGCGGATTTCTCTTCAAAGTCACGTGGAAAAGATTGTTGTTGAAAATGACAGAGCCATTGGAGTGAAGCTGAGAAGCGGCCAATTCGTACATGCCAAGAAGGCTGTTGTGAGCAATGCATCAATGTGGGATACTTTAAAATTGCTCCCTCAAGAAGTTGTTCCAAAGTCTTACTCAAATAGGATTAACACGACTAGTCAGTGTGAATCTTTCATGCATCTCCATTTGGGATTTGATGCTGAGGGTATACGCAGCGATCTAGGAATTCATCATATAGTTGTAAATGATTGGGAAAGAGGAGTTGACGCAGATCAGAATGTTGTGTTGATATCAGTTCCTAGTGTACTTACTCCTAATCTGGCACCTACTGGGAAACATGTGTTACATGCTTATCTTCCAGGAACTGAACCATTTGAGTTGTGGGAAGGACTTGATCGTAAGAGTGCCGAATACAGAAATCTTAAAGCTCAAAGATCAGAGATAATGTGGAGAGCAGTGGAGAGAGCAGTGGGACCAGGATTCAGCAGGGAGAAATGTGAAGTGAAGTTAGTTGGAAGTCCACTCACACATCAAAGGTTTCTTCGGAGGAACAGAGGAACATATGGACCAGCTATACAAGCTGGTACAGATACCTTTCCTGGACATTCAACTCCAATTCCACACCTTTATTGTTGTGGAGACTCCACTTTTCCTGGCATTGGCGTCCCTGCAGTTGCTGCCAGTGGTGCAATTGTAGCTAATTCTCTAGTTTCAGTGTCTCAGCATTCCCAGCTGCTTGATGCAATTGGAATTTGA

Protein sequence

>Msa1418840

MPCHAMNAMRGVSVGVFPCNVMRVRRYCSRIDDDHHHSHSNGRIRKGGVVVRNSSNKVDETETDVIVIGSGIGGLSCAALLARYEQDVVVFESHDHAGGAAHSFDVKGYKFDSGPSLFSGLQSRGPQANPLAQVLDALGESVPCATYDSWMVHVPEADFLSRIGPTEFLKDLHNYAGPEAVQEWQKLLDAVLPLSTAAMALPPLSVRGDFGVLYTAAARYAPSLFNTFFQMGPQAALRSTQLLSPFSQILDSLQLKNPFIRNWIDLLSFLLAGVKSDSILSAEMVYMFAEWYKPGGCLEYPLDGAAGIVDALVRGLEKFGGRISLQSHVEKIVVENDRAIGVKLRSGQFVHAKKAVVSNASMWDTLKLLPQEVVPKSYSNRINTTSQCESFMHLHLGFDAEGIRSDLGIHHIVVNDWERGVDADQNVVLISVPSVLTPNLAPTGKHVLHAYLPGTEPFELWEGLDRKSAEYRNLKAQRSEIMWRAVERAVGPGFSREKCEVKLVGSPLTHQRFLRRNRGTYGPAIQAGTDTFPGHSTPIPHLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSQLLDAIGI*